Pregenerated sensors for ZFP667 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054893Ensembl transcript IDs: ENSMUST00000086327.12, ENSMUST00000108562.2, ENSMUST00000153840.2, ENSMUST00000170776.8
Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGGATCAGGCCACAGCTTCCAGGAAGCCACAGGGTCAGGAGAATaGACAACTGGGACTCCACATTGCGCTGTGCTGCTAAATGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: AGSGHSFQEATGSGE*TTGTPHCAVLLNGH Trigger: GTGACCATTTAGCAGCACAGCGCAATGTGGAGTCCCAGTTGTTCATTCTCCTGACCCTGTGGCTTCCTGGAAGCTGTGGCCTGATCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR CCA 90 bp | AGGCCACAGCTTCCAGGAAGCCACAGGGTCAGGAGAATGAACAACTaGGACTCCACATTGCGCTGTGCTGCTAAATGGTCACATTTGGTA | + |
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Preference number: 1 (lower is better) Translates to: RPQLPGSHRVRRMNN*DSTLRCAAKWSHLV Trigger: TACCAAATGTGACCATTTAGCAGCACAGCGCAATGTGGAGTCCCAGTTGTTCATTCTCCTGACCCTGTGGCTTCCTGGAAGCTGTGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR CCA 90 bp | CACAGTTCCTCCATAAGCTGGAAGTCCAAGGTGAGCGTAGCAAACTaGTCAGGTTCTGGTAGGATCTTTTCTTGGTTTGCAGATGGCCCG | + |
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Preference number: 1 (lower is better) Translates to: HSSSISWKSKVSVAN*SGSGRIFSWFADGP Trigger: CGGGCCATCTGCAAACCAAGAAAAGATCCTACCAGAACCTGACCAGTTTGCTACGCTCACCTTGGACTTCCAGCTTATGGAGGAACTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR TCA 90 bp | AGATGGCCCGCCTGTGTCCTCACATGGGACAGGAGACAAGGTCTCTaGTCAATAAACATATCAAAAAGGCCCATCTGCACCACAACTCCA | + |
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Preference number: 1 (lower is better) Translates to: RWPACVLTWDRRQGL*SINISKRPICTTTP Trigger: TGGAGTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGTCTCCTGTCCCATGTGAGGACACAGGCGGGCCATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR GCA 90 bp | AATAGCTTCTCCCTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTaGCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCT | + |
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Preference number: 1 (lower is better) Translates to: NSFSLLSSFSFFSIS*PSPQPVLLNVRSVS Trigger: AGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGAGAAGCTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR TCA 90 bp | CATATCAAAAAGGCCCATCTGCACCACAACTCCATTAATCTCATTTaGAAATATCATCACATTGAAGGATTAGGGCTTCAACATGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: HIKKAHLHHNSINLI*KYHHIEGLGLQHVR Trigger: CCTCACATGTTGAAGCCCTAATCCTTCAATGTGATGATATTTTCAAATGAGATTAATGGAGTTGTGGTGCAGATGGGCCTTTTTGATATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCACCCCAACAAAGCTCTaGAGGAGAAAGAGGCACCCT | + |
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Preference number: 2 (lower is better) Translates to: LLSSFSFFSISCPSPQPVTPTKL*RRKRHP Trigger: AGGGTGCCTCTTTCTCCTTCAGAGCTTTGTTGGGGT...GACAGGCTGGGGGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACAGAGAAAGAGGCACCCTaGTTGGTCTGGTCTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LLPKPPACLTKCSQCIFTEKEAP*LVWSAC Trigger: ACAGGCAGACCAGACCAAGCAGGGTGCCTCTTTCTC...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | GGTAGGATCTTTTCTTGGTTTGCAGATGGCCCGCCTGTGTCCTCACATGGGACACGCTGTGCTGCTAAATaGTCACATTTGGTAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: GRIFSWFADGPPVSSHGTRCAAK*SHLVGQ Trigger: CTGACCTACCAAATGTGACCATTTAGCAGCACAGCG...TGTCCCATGTGAGGACACAGGCGGGCCATCTGCAAACCAAGAAAAGATCCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCAGGAGAATGAACAACTaGGACTCCACATTGCGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LLSSFSFFSISCPSPQPVRRMNN*DSTLRC Trigger: ACAGCGCAATGTGGAGTCCCAGTTGTTCATTCTCCT...GACAGGCTGGGGGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTCCTCCATAAGCTGGAAGTCCAAGGTGAGCGTAGCAAACTGGTCAGGTTCTAACACTCTGTTCTCCTaGGACCTCAACTCAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: SSSISWKSKVSVANWSGSNTLFS*DLNSGS Trigger: TGAGCCTGAGTTGAGGTCCCAGGAGAACAGAGTGTT...AGAACCTGACCAGTTTGCTACGCTCACCTTGGACTTCCAGCTTATGGAGGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGCTTCTCCCTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCACAGGGTCAGGAGAATaGACAACTGGGACTCCACAT | + |
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Preference number: 2 (lower is better) Translates to: IASPCSQVSHSSVSPAQATGSGE*TTGTPH Trigger: ATGTGGAGTCCCAGTTGTTCATTCTCCTGACCCTGT...GGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGAGAAGCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAGGATCTTTTCTTGGTTTGCAGATGGCCCGCCTGTGTCCTCACATGGGACAACTCCCTCCAACGAATaGTTGCGGATTTGTGATTTT | + |
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Preference number: 2 (lower is better) Translates to: GRIFSWFADGPPVSSHGTTPSNE*LRICDF Trigger: AAAATCACAAATCCGCAATCATTCGTTGGAGGGAGT...TGTCCCATGTGAGGACACAGGCGGGCCATCTGCAAACCAAGAAAAGATCCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACACCTGATCCAAAATTCTaGGCATACCTCAGCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LLPKPPACLTKCSQCIFTPDPKF*AYLSCF Trigger: AAAGCAGCTGAGGTATGCTCAGAATTTTGGATCAGG...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGCTTCTCCCTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCAACACTCTGTTCTCCTaGGACCTCAACTCAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: IASPCSQVSHSSVSPAQANTLFS*DLNSGS Trigger: TGAGCCTGAGTTGAGGTCCCAGGAGAACAGAGTGTT...GGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGAGAAGCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACACGTTACAACTTACGATaGGTTTCTGGGACATACATC | + |
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Preference number: 2 (lower is better) Translates to: LLPKPPACLTKCSQCIFTRYNLR*VSGTYI Trigger: GATGTATGTCCCAGAAACTCATCGTAAGTTGTAACG...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACAACTCCCTCCAACGAATaGTTGCGGATTTGTGATTTT | + |
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Preference number: 2 (lower is better) Translates to: LLPKPPACLTKCSQCIFTTPSNE*LRICDF Trigger: AAAATCACAAATCCGCAATCATTCGTTGGAGGGAGT...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTCCTCCATAAGCTGGAAGTCCAAGGTGAGCGTAGCAAACTGGTCAGGTTCTCCTGATCCAAAATTCTaGGCATACCTCAGCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: SSSISWKSKVSVANWSGSPDPKF*AYLSCF Trigger: AAAGCAGCTGAGGTATGCTCAGAATTTTGGATCAGG...AGAACCTGACCAGTTTGCTACGCTCACCTTGGACTTCCAGCTTATGGAGGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAGGATCTTTTCTTGGTTTGCAGATGGCCCGCCTGTGTCCTCACATGGGACATTCACTCACAAACCCTaGTCCAAAATTCTGAGCATA | + |
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Preference number: 2 (lower is better) Translates to: GRIFSWFADGPPVSSHGTFTHKP*SKILSI Trigger: TATGCTCAGAATTTTGGATCAGGGTTTGTGAGTGAA...TGTCCCATGTGAGGACACAGGCGGGCCATCTGCAAACCAAGAAAAGATCCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGACGAGCTGACTTAAGAGAAATTAGGTTCTCACAGTTCCTCCATAAGCTGACCCCAACAAAGCTCTaGAGGAGAAAGAGGCACCCT | + |
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Preference number: 2 (lower is better) Translates to: HRRADLREIRFSQFLHKLTPTKL*RRKRHP Trigger: AGGGTGCCTCTTTCTCCTTCAGAGCTTTGTTGGGGT...CAGCTTATGGAGGAACTGTGAGAACCTAATTTCTCTTAAGTCAGCTCGTCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR GCA 90 bp | GAGACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACGAGAAAGAGGCACCCTaGTTGGTCTGGTCTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: ETRSLINKHIKKAHLHHNEKEAP*LVWSAC Trigger: ACAGGCAGACCAGACCAAGCAGGGTGCCTCTTTCTC...GTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGCTTCTCCCTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCAGGAGAATGAACAACTaGGACTCCACATTGCGCTGT | + |
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Preference number: 2 (lower is better) Translates to: IASPCSQVSHSSVSPAQARRMNN*DSTLRC Trigger: ACAGCGCAATGTGGAGTCCCAGTTGTTCATTCTCCT...GGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGAGAAGCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTCCTCCATAAGCTGGAAGTCCAAGGTGAGCGTAGCAAACTGGTCAGGTTCTGAGAGTATCATAACATaGCCCCGCAGACACAAAACA | + |
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Preference number: 2 (lower is better) Translates to: SSSISWKSKVSVANWSGSESIIT*PRRHKT Trigger: TGTTTTGTGTCTGCGGGGCCATGTTATGATACTCTC...AGAACCTGACCAGTTTGCTACGCTCACCTTGGACTTCCAGCTTATGGAGGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGACGAGCTGACTTAAGAGAAATTAGGTTCTCACAGTTCCTCCATAAGCTGAAGAGGCACCCTGCTTaGTCTGGTCTGCCTGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: HRRADLREIRFSQFLHKLKRHPA*SGLPVR Trigger: TCTAACAGGCAGACCAGACCAAGCAGGGTGCCTCTT...CAGCTTATGGAGGAACTGTGAGAACCTAATTTCTCTTAAGTCAGCTCGTCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR GCA 90 bp | ACATGTGAGGTTTGCGATGGCACAAATATCCAGACCATAAAAACCCAAACACATGAGAAAGAGGCACCCTaGTTGGTCTGGTCTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: TCEVCDGTNIQTIKTQTHEKEAP*LVWSAC Trigger: ACAGGCAGACCAGACCAAGCAGGGTGCCTCTTTCTC...ATGTGTTTGGGTTTTTATGGTCTGGATATTTGTGCCATCGCAAACCTCACATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | AAACCCCTTCACTCACAAACCCTGATCCAAAATTCTGAGCATACCTCAGCTGCTAGGAGAATGAACAACTaGGACTCCACATTGCGCTGT | + |
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Preference number: 2 (lower is better) Translates to: KPLHSQTLIQNSEHTSAARRMNN*DSTLRC Trigger: ACAGCGCAATGTGGAGTCCCAGTTGTTCATTCTCCT...AGCAGCTGAGGTATGCTCAGAATTTTGGATCAGGGTTTGTGAGTGAAGGGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACTCCAAGAGGCACCCTGCTTaGTCTGGTCTGCCTGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: TRSLINKHIKKAHLHHNSKRHPA*SGLPVR Trigger: TCTAACAGGCAGACCAGACCAAGCAGGGTGCCTCTT...GGAGTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | GAGACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACAAGAGGCACCCTGCTTaGTCTGGTCTGCCTGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: ETRSLINKHIKKAHLHHNKRHPA*SGLPVR Trigger: TCTAACAGGCAGACCAGACCAAGCAGGGTGCCTCTT...GTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACTCCACAGGGTCAGGAGAATaGACAACTGGGACTCCACAT | + |
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Preference number: 2 (lower is better) Translates to: TRSLINKHIKKAHLHHNSTGSGE*TTGTPH Trigger: ATGTGGAGTCCCAGTTGTTCATTCTCCTGACCCTGT...GGAGTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACTCCAACACTCTGTTCTCCTaGGACCTCAACTCAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TRSLINKHIKKAHLHHNSNTLFS*DLNSGS Trigger: TGAGCCTGAGTTGAGGTCCCAGGAGAACAGAGTGTT...GGAGTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGAGCCTGTGGTGGTGGACATTTCCTATTCAAATCCCAATGTTTGTGCTCCGTTACAACTTACGATaGGTTTCTGGGACATACATC | + |
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Preference number: 2 (lower is better) Translates to: MVSLWWWTFPIQIPMFVLRYNLR*VSGTYI Trigger: GATGTATGTCCCAGAAACTCATCGTAAGTTGTAACG...GAGCACAAACATTGGGATTTGAATAGGAAATGTCCACCACCACAGGCTCACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086327.12 ENSMUST00000170776.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGACGAGCTGACTTAAGAGAAATTAGGTTCTCACAGTTCCTCCATAAGCTGCCTGATCCAAAATTCTaGGCATACCTCAGCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: HRRADLREIRFSQFLHKLPDPKF*AYLSCF Trigger: AAAGCAGCTGAGGTATGCTCAGAATTTTGGATCAGG...CAGCTTATGGAGGAACTGTGAGAACCTAATTTCTCTTAAGTCAGCTCGTCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR TCA 90 bp | TTTATTCTGATTAGGATGAATGAGGGAAGACCCTCCCATTGTTGGGTGTTGCATCCATCCATCTTGGAATaGAGCTCATTTAGACGCAGG | + |
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Preference number: 2 (lower is better) Translates to: FILIRMNEGRPSHCWVLHPSILE*SSFRRR Trigger: CCTGCGTCTAAATGAGCTTCATTCCAAGATGGATGG...ATGCAACACCCAACAATGGGAGGGTCTTCCCTCATTCATCCTAATCAGAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153840.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGACGAGCTGACTTAAGAGAAATTAGGTTCTCACAGTTCCTCCATAAGCTGGAGAGTATCATAACATaGCCCCGCAGACACAAAACA | + |
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Preference number: 2 (lower is better) Translates to: HRRADLREIRFSQFLHKLESIIT*PRRHKT Trigger: TGTTTTGTGTCTGCGGGGCCATGTTATGATACTCTC...CAGCTTATGGAGGAACTGTGAGAACCTAATTTCTCTTAAGTCAGCTCGTCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | ACATGTGAGGTTTGCGATGGCACAAATATCCAGACCATAAAAACCCAAACACATCGCTGTGCTGCTAAATaGTCACATTTGGTAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: TCEVCDGTNIQTIKTQTHRCAAK*SHLVGQ Trigger: CTGACCTACCAAATGTGACCATTTAGCAGCACAGCG...ATGTGTTTGGGTTTTTATGGTCTGGATATTTGTGCCATCGCAAACCTCACATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACTCCCACAAAACATTTTGTTaGCAGATAGTGCACTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: TRSLINKHIKKAHLHHNSHKTFC*QIVHSL Trigger: GAGGGAGTGCACTATCTGCCAACAAAATGTTTTGTG...GGAGTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR GCA 90 bp | GAGACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACCCTCCAACGAATGATTaGGGATTTGTGATTTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: ETRSLINKHIKKAHLHHNPPTND*GFVIFQ Trigger: CTGAAAAATCACAAATCCGCAATCATTCGTTGGAGG...GTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGACGAGCTGACTTAAGAGAAATTAGGTTCTCACAGTTCCTCCATAAGCTGCTTACGATGAGTTTCTaGGACATACATCATCATAAG | + |
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Preference number: 2 (lower is better) Translates to: HRRADLREIRFSQFLHKLLTMSF*DIHHHK Trigger: CTTATGATGATGTATGTCCCAGAAACTCATCGTAAG...CAGCTTATGGAGGAACTGTGAGAACCTAATTTCTCTTAAGTCAGCTCGTCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | ACATGTGAGGTTTGCGATGGCACAAATATCCAGACCATAAAAACCCAAACACATCACAAAACATTTTGTTaGCAGATAGTGCACTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: TCEVCDGTNIQTIKTQTHHKTFC*QIVHSL Trigger: GAGGGAGTGCACTATCTGCCAACAAAATGTTTTGTG...ATGTGTTTGGGTTTTTATGGTCTGGATATTTGTGCCATCGCAAACCTCACATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAAGTGGACTCTAGCTCCAGTTCCATCTCATTGTATGCATCCAATAATATGTGAGAGTATCATAACATaGCCCCGCAGACACAAAACA | + |
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Preference number: 2 (lower is better) Translates to: EKWTLAPVPSHCMHPIICESIIT*PRRHKT Trigger: TGTTTTGTGTCTGCGGGGCCATGTTATGATACTCTC...ACATATTATTGGATGCATACAATGAGATGGAACTGGAGCTAGAGTCCACTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAAGTGGACTCTAGCTCCAGTTCCATCTCATTGTATGCATCCAATAATATGTCGTTACAACTTACGATaGGTTTCTGGGACATACATC | + |
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Preference number: 2 (lower is better) Translates to: EKWTLAPVPSHCMHPIICRYNLR*VSGTYI Trigger: GATGTATGTCCCAGAAACTCATCGTAAGTTGTAACG...ACATATTATTGGATGCATACAATGAGATGGAACTGGAGCTAGAGTCCACTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTGCGATGGCACAAATATCCAGACCATAAAAACCCAAACACATATCTCAAGAACTCCCTCCAACGAATaGTTGCGGATTTGTGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: VCDGTNIQTIKTQTHISRTPSNE*LRICDF Trigger: AAAATCACAAATCCGCAATCATTCGTTGGAGGGAGT...TCTTGAGATATGTGTTTGGGTTTTTATGGTCTGGATATTTGTGCCATCGCAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR GCA 90 bp | ACATGTGAGGTTTGCGATGGCACAAATATCCAGACCATAAAAACCCAAACACATCCTCCAACGAATGATTaGGGATTTGTGATTTTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: TCEVCDGTNIQTIKTQTHPPTND*GFVIFQ Trigger: CTGAAAAATCACAAATCCGCAATCATTCGTTGGAGG...ATGTGTTTGGGTTTTTATGGTCTGGATATTTGTGCCATCGCAAACCTCACATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACTCCCTTACGATGAGTTTCTaGGACATACATCATCATAAG | + |
|
Preference number: 2 (lower is better) Translates to: TRSLINKHIKKAHLHHNSLTMSF*DIHHHK Trigger: CTTATGATGATGTATGTCCCAGAAACTCATCGTAAG...GGAGTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTGCGATGGCACAAATATCCAGACCATAAAAACCCAAACACATATCTCAAGACACAAAACATTTTGTTaGCAGATAGTGCACTCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: VCDGTNIQTIKTQTHISRHKTFC*QIVHSL Trigger: GAGGGAGTGCACTATCTGCCAACAAAATGTTTTGTG...TCTTGAGATATGTGTTTGGGTTTTTATGGTCTGGATATTTGTGCCATCGCAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAAAGTGGACTCTAGCTCCAGTTCCATCTCATTGTATGCATCCAATAATATGTTTCACTCACAAACCCTaGTCCAAAATTCTGAGCATA | + |
|
Preference number: 2 (lower is better) Translates to: EKWTLAPVPSHCMHPIICFTHKP*SKILSI Trigger: TATGCTCAGAATTTTGGATCAGGGTTTGTGAGTGAA...ACATATTATTGGATGCATACAATGAGATGGAACTGGAGCTAGAGTCCACTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTTAAACGGCACGTGCAGAAGAGAACATGTAAAAGAACCTCTTTGTATATATTCACTCACAAACCCTaGTCCAAAATTCTGAGCATA | + |
|
Preference number: 2 (lower is better) Translates to: SLKRHVQKRTCKRTSLYIFTHKP*SKILSI Trigger: TATGCTCAGAATTTTGGATCAGGGTTTGTGAGTGAA...TATATACAAAGAGGTTCTTTTACATGTTCTCTTCTGCACGTGCCGTTTAAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086327.12 ENSMUST00000170776.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTGCGATGGCACAAATATCCAGACCATAAAAACCCAAACACATATCTCAAGACTTACGATGAGTTTCTaGGACATACATCATCATAAG | + |
|
Preference number: 2 (lower is better) Translates to: VCDGTNIQTIKTQTHISRLTMSF*DIHHHK Trigger: CTTATGATGATGTATGTCCCAGAAACTCATCGTAAG...TCTTGAGATATGTGTTTGGGTTTTTATGGTCTGGATATTTGTGCCATCGCAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR GCA 72 bp | TCTGAAGGAGAAAGAGGCACCCTGCTTGGTCTGGTCTaGCTGTTAGACTTAACACTCTGTTCTCCTGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: SEGERGTLLGLV*LLDLTLCSPGT Trigger: GGTCCCAGGAGAACAGAGTGTTAAGTCTAACAGGCAGACCAGACCAAGCAGGGTGCCTCTTTCTCCTTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR CCA 72 bp | CTTCCAGGAAGCCACAGGGTCAGGAGAATGAACAACTaGGACTCCACATTGCGCTGTGCTGCTAAATGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPGSHRVRRMNN*DSTLRCAAKWS Trigger: TGACCATTTAGCAGCACAGCGCAATGTGGAGTCCCAGTTGTTCATTCTCCTGACCCTGTGGCTTCCTGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCCTCCATAAGCTGGAAGTCCAAGGTGAGCGTAGCAAACTGGTCAGGTTCTAACTGGGACTCCACATaGCGCTGTGCTGCTAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: SSSISWKSKVSVANWSGSNWDST*RCAAKW Trigger: CCATTTAGCAGCACAGCGCAATGTGGAGTCCCAGTT...AGAACCTGACCAGTTTGCTACGCTCACCTTGGACTTCCAGCTTATGGAGGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR CCA 72 bp | GCCTCCTACCAGCTGGGAATGGTGAGCCTGTGGTGGTaGACATTTCCTATTCAAATCCCAATGTTTGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ASYQLGMVSLWW*TFPIQIPMFVL Trigger: GAGCACAAACATTGGGATTTGAATAGGAAATGTCCACCACCACAGGCTCACCATTCCCAGCTGGTAGGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086327.12 |
||
| 3UTR CCA 72 bp | CCTGGAGCCTCCTACCAGCTGGGAATGGTGAGCCTGTaGTGGTGGACATTTCCTATTCAAATCCCAATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PGASYQLGMVSL*WWTFPIQIPMF Trigger: AAACATTGGGATTTGAATAGGAAATGTCCACCACCACAGGCTCACCATTCCCAGCTGGTAGGAGGCTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086327.12 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCTTCTCCCTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCAACTGGGACTCCACATaGCGCTGTGCTGCTAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: IASPCSQVSHSSVSPAQANWDST*RCAAKW Trigger: CCATTTAGCAGCACAGCGCAATGTGGAGTCCCAGTT...GGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGAGAAGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR GCA 72 bp | TCCCTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTaGCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: SLLSSFSFFSIS*PSPQPVLLNVR Trigger: GCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR TCA 72 bp | GCCTGTGTCCTCACATGGGACAGGAGACAAGGTCTCTaGTCAATAAACATATCAAAAAGGCCCATCTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: ACVLTWDRRQGL*SINISKRPICT Trigger: GGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGTCTCCTGTCCCATGTGAGGACACAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAGACGAGCTGACTTAAGAGAAATTAGGTTCTCACAGTTCCTCCATAAGCTGAACTGGGACTCCACATaGCGCTGTGCTGCTAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: HRRADLREIRFSQFLHKLNWDST*RCAAKW Trigger: CCATTTAGCAGCACAGCGCAATGTGGAGTCCCAGTT...CAGCTTATGGAGGAACTGTGAGAACCTAATTTCTCTTAAGTCAGCTCGTCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACACAGACACAAAACATTTaGTTGGCAGATAGTGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: LLPKPPACLTKCSQCIFTQTQNI*LADSAL Trigger: GAGTGCACTATCTGCCAACAAAATGTTTTGTGTCTG...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCTTCTCCCTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCACACAAAACATTTTGTaGGCAGATAGTGCACTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: IASPCSQVSHSSVSPAQATQNIL*ADSALP Trigger: AGGGAGTGCACTATCTGCCAACAAAATGTTTTGTGT...GGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGAGAAGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCTTCTCCCTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCCAGACACAAAACATTTaGTTGGCAGATAGTGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: IASPCSQVSHSSVSPAQAQTQNI*LADSAL Trigger: GAGTGCACTATCTGCCAACAAAATGTTTTGTGTCTG...GGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGAGAAGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACCCCTTCACTCACAAACCCTGATCCAAAATTCTGAGCATACCTCAGCTGCTACACAAAACATTTTGTaGGCAGATAGTGCACTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: KPLHSQTLIQNSEHTSAATQNIL*ADSALP Trigger: AGGGAGTGCACTATCTGCCAACAAAATGTTTTGTGT...AGCAGCTGAGGTATGCTCAGAATTTTGGATCAGGGTTTGTGAGTGAAGGGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCTTCTCCCTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCTCCAGTTCCATCTCATaGTATGCATCCAATAATATG | + |
|
Preference number: 3 (lower is better) Translates to: IASPCSQVSHSSVSPAQASSSIS*YASNNM Trigger: CATATTATTGGATGCATACAATGAGATGGAACTGGA...GGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGAGAAGCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACTCCGACTGCTTTGGTTTTTaGGCTTTCAAAGGGAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: TRSLINKHIKKAHLHHNSDCFGF*AFKGRV Trigger: TACTCTCCCTTTGAAAGCCAAAAAACCAAAGCAGTC...GGAGTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAAGTGGACTCTAGCTCCAGTTCCATCTCATTGTATGCATCCAATAATATGTGACTGCTTTGGTTTTTaGGCTTTCAAAGGGAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: EKWTLAPVPSHCMHPIICDCFGF*AFKGRV Trigger: TACTCTCCCTTTGAAAGCCAAAAAACCAAAGCAGTC...ACATATTATTGGATGCATACAATGAGATGGAACTGGAGCTAGAGTCCACTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACTCCTCCAGTTCCATCTCATaGTATGCATCCAATAATATG | + |
|
Preference number: 3 (lower is better) Translates to: TRSLINKHIKKAHLHHNSSSSIS*YASNNM Trigger: CATATTATTGGATGCATACAATGAGATGGAACTGGA...GGAGTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGACCATAAAAACCCAAACACATATCTCAAGAGTAACTTTCAGAGCAAATAGCCAGACACAAAACATTTaGTTGGCAGATAGTGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: QTIKTQTHISRVTFRANSQTQNI*LADSAL Trigger: GAGTGCACTATCTGCCAACAAAATGTTTTGTGTCTG...GCTATTTGCTCTGAAAGTTACTCTTGAGATATGTGTTTGGGTTTTTATGGTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTTAAACGGCACGTGCAGAAGAGAACATGTAAAAGAACCTCTTTGTATATAGACTGCTTTGGTTTTTaGGCTTTCAAAGGGAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SLKRHVQKRTCKRTSLYIDCFGF*AFKGRV Trigger: TACTCTCCCTTTGAAAGCCAAAAAACCAAAGCAGTC...TATATACAAAGAGGTTCTTTTACATGTTCTCTTCTGCACGTGCCGTTTAAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086327.12 ENSMUST00000170776.8 |
||
| 3UTR TCA 72 bp | AAGGCCCATCTGCACCACAACTCCATTAATCTCATTTaGAAATATCATCACATTGAAGGATTAGGGCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: KAHLHHNSINLI*KYHHIEGLGLQ Trigger: TTGAAGCCCTAATCCTTCAATGTGATGATATTTTCAAATGAGATTAATGGAGTTGTGGTGCAGATGGGCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCGGGATGACATCCGACTaGAGACTTTCCCACACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSSFSFFSISCPSPQPVGMTSD*RLSHTS Trigger: GGAAGTGTGGGAAAGTCTTCAGTCGGATGTCATCCC...GACAGGCTGGGGGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCCTTTCCCACACTTCCTaGACTGGTGAACGCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSSFSFFSISCPSPQPVLSHTS*TGERCQ Trigger: CTGACAGCGTTCACCAGTGCAGGAAGTGTGGGAAAG...GACAGGCTGGGGGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR CAA 72 bp | CAAACTGGTCAGGTTCTGGTAGGATCTTTTCTTGGTTaGCAGATGGCCCGCCTGTGTCCTCACATGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QTGQVLVGSFLG*QMARLCPHMGQ Trigger: CTGTCCCATGTGAGGACACAGGCGGGCCATCTGCAAACCAAGAAAAGATCCTACCAGAACCTGACCAGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | GACCCTCCCATTGTTGGGTGTTGCATAGCGCTCTCCTCTAGGATTAAAACCATCTGGTGCCTTGGATTTTaGTTTCCCGCGGACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DPPIVGCCIALSSRIKTIWCLGF*FPADCR Trigger: CCTGCAGTCCGCGGGAAATCAAAATCCAAGGCACCA...GATGGTTTTAATCCTAGAGGAGAGCGCTATGCAACACCCAACAATGGGAGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153840.2 |
||
| CDS-3UTR TCA 90 bp | AGTTCCTCCATAAGCTGGAAGTCCAAGGTGAGCGTAGCAAACTGGTCAGGTTCTTGGTGCCTTGGATTTTaGTTTCCCGCGGACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSISWKSKVSVANWSGSWCLGF*FPADCR Trigger: CCTGCAGTCCGCGGGAAATCAAAATCCAAGGCACCA...AGAACCTGACCAGTTTGCTACGCTCACCTTGGACTTCCAGCTTATGGAGGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | ATAGCTTCTCCCTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCTGGTGCCTTGGATTTTaGTTTCCCGCGGACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IASPCSQVSHSSVSPAQAWCLGF*FPADCR Trigger: CCTGCAGTCCGCGGGAAATCAAAATCCAAGGCACCA...GGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGAGAAGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACATTCTCTCATGGAGAATaGGGGAAATGCGCTGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLPKPPACLTKCSQCIFTFSHGE*GKCAER Trigger: TCGCTCAGCGCATTTCCCTCATTCTCCATGAGAGAA...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | CTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTTTCTCTCATGGAGAATaGGGGAAATGCGCTGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LQYLLPKPPACLTKCSQCFSHGE*GKCAER Trigger: TCGCTCAGCGCATTTCCCTCATTCTCCATGAGAGAA...ACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAGATACTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | GGTAGGATCTTTTCTTGGTTTGCAGATGGCCCGCCTGTGTCCTCACATGGGACAATGTCGAATCAGCGATaGGCTCCGACTATAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRIFSWFADGPPVSSHGTMSNQR*APTISL Trigger: AAGGCTTATAGTCGGAGCTCATCGCTGATTCGACAT...TGTCCCATGTGAGGACACAGGCGGGCCATCTGCAAACCAAGAAAAGATCCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCCTCCATAAGCTGGAAGTCCAAGGTGAGCGTAGCAAACTGGTCAGGTTCTCTTTCCCACACTTCCTaGACTGGTGAACGCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSISWKSKVSVANWSGSLSHTS*TGERCQ Trigger: CTGACAGCGTTCACCAGTGCAGGAAGTGTGGGAAAG...AGAACCTGACCAGTTTGCTACGCTCACCTTGGACTTCCAGCTTATGGAGGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCAAGTCACTGGTGCCTTaGATTTTGATTTCCCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSSFSFFSISCPSPQPVKSLVP*ILISRG Trigger: TCCGCGGGAAATCAAAATCCAAGGCACCAGTGACTT...GACAGGCTGGGGGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACAATGTCGAATCAGCGATaGGCTCCGACTATAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLPKPPACLTKCSQCIFTMSNQR*APTISL Trigger: AAGGCTTATAGTCGGAGCTCATCGCTGATTCGACAT...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCTCCGAATGTATACTCTaGTGTCGAATCAGCGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSSFSFFSISCPSPQPVSECIL*CRISDE Trigger: CTCATCGCTGATTCGACATCAGAGTATACATTCGGA...GACAGGCTGGGGGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | GGTAGGATCTTTTCTTGGTTTGCAGATGGCCCGCCTGTGTCCTCACATGGGACATCCGAATGTATACTCTaGTGTCGAATCAGCGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRIFSWFADGPPVSSHGTSECIL*CRISDE Trigger: CTCATCGCTGATTCGACATCAGAGTATACATTCGGA...TGTCCCATGTGAGGACACAGGCGGGCCATCTGCAAACCAAGAAAAGATCCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | ATAGCTTCTCCCTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCCTTTCCCACACTTCCTaGACTGGTGAACGCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IASPCSQVSHSSVSPAQALSHTS*TGERCQ Trigger: CTGACAGCGTTCACCAGTGCAGGAAGTGTGGGAAAG...GGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGAGAAGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTAAGTCACTGGTGCCTTaGATTTTGATTTCCCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQYLLPKPPACLTKCSQCKSLVP*ILISRG Trigger: TCCGCGGGAAATCAAAATCCAAGGCACCAGTGACTT...ACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAGATACTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACAAAGTCACTGGTGCCTTaGATTTTGATTTCCCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLPKPPACLTKCSQCIFTKSLVP*ILISRG Trigger: TCCGCGGGAAATCAAAATCCAAGGCACCAGTGACTT...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| 3UTR CAA 72 bp | CACAGGGTCAGGAGAATGAACAACTGGGACTCCACATaGCGCTGTGCTGCTAAATGGTCACATTTGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HRVRRMNNWDST*RCAAKWSHLVG Trigger: ACCTACCAAATGTGACCATTTAGCAGCACAGCGCAATGTGGAGTCCCAGTTGTTCATTCTCCTGACCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCGGGAACCTTTTGTTGTaGAGAAGTTGGTTTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLSSFSFFSISCPSPQPVGNLLL*RSWFLT Trigger: TGTGAGAAACCAACTTCTTCACAACAAAAGGTTCCC...GACAGGCTGGGGGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACAGGGATAAGATCTGCCTaGAAACGTGTCTACAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLPKPPACLTKCSQCIFTGIRSA*KRVYKY Trigger: GTACTTGTAGACACGTTTTCAGGCAGATCTTATCCC...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | GGTAGGATCTTTTCTTGGTTTGCAGATGGCCCGCCTGTGTCCTCACATGGGACAATGTTCACTAAGAAATaGCTGGCGGCCAAACACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRIFSWFADGPPVSSHGTMFTKK*LAAKHF Trigger: AAAGTGTTTGGCCGCCAGTCATTTCTTAGTGAACAT...TGTCCCATGTGAGGACACAGGCGGGCCATCTGCAAACCAAGAAAAGATCCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCGTTCCTTCTTGGATTTaGTTGGGACTGAACTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSSFSFFSISCPSPQPVVPSWI*LGLNSC Trigger: ACAAGAGTTCAGTCCCAAGCAAATCCAAGAAGGAAC...GACAGGCTGGGGGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | CTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTGAGGCCTTCTCATGGTaGAAACTTTCCTTTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: LQYLLPKPPACLTKCSQCEAFSW*KLSFPL Trigger: TAATGGAAAGGAAAGTTTTCACCATGAGAAGGCCTC...ACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAGATACTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACAGAGGCCTTCTCATGGTaGAAACTTTCCTTTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: LLPKPPACLTKCSQCIFTEAFSW*KLSFPL Trigger: TAATGGAAAGGAAAGTTTTCACCATGAGAAGGCCTC...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | ATGGTGAGCCTGTGGTGGTGGACATTTCCTATTCAAATCCCAATGTTTGTGCTCGGTCTGTCCTCACTGTaGATTCTCTTATGCCGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: MVSLWWWTFPIQIPMFVLGLSSL*ILLCRV Trigger: TACGCGGCATAAGAGAATTCACAGTGAGGACAGACC...GAGCACAAACATTGGGATTTGAATAGGAAATGTCCACCACCACAGGCTCACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086327.12 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCCTCCATAAGCTGGAAGTCCAAGGTGAGCGTAGCAAACTGGTCAGGTTCTTCCGAATGTATACTCTaGTGTCGAATCAGCGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSISWKSKVSVANWSGSSECIL*CRISDE Trigger: CTCATCGCTGATTCGACATCAGAGTATACATTCGGA...AGAACCTGACCAGTTTGCTACGCTCACCTTGGACTTCCAGCTTATGGAGGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACAGTTCCTTCTTGGATTTaGTTGGGACTGAACTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPKPPACLTKCSQCIFTVPSWI*LGLNSC Trigger: ACAAGAGTTCAGTCCCAAGCAAATCCAAGAAGGAAC...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACACGTGTCTACAAGTACTaGATTCATAAGACCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLPKPPACLTKCSQCIFTRVYKY*IHKTSL Trigger: GAGAGAGGTCTTATGAATGCAGTACTTGTAGACACG...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTCTGAATGTTCCTTCTTaGATTTGCTTGGGACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQYLLPKPPACLTKCSQCLNVPS*ICLGLN Trigger: GTTCAGTCCCAAGCAAATCCAAGAAGGAACATTCAG...ACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAGATACTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCGGTTTCTCTTCCGAATaGATGTTGAGATGCACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LLSSFSFFSISCPSPQPVGFSSE*MLRCTL Trigger: TAAAGTGCATCTCAACATCCATTCGGAAGAGAAACC...GACAGGCTGGGGGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | ATAGCTTCTCCCTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCGGGATAAGATCTGCCTaGAAACGTGTCTACAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IASPCSQVSHSSVSPAQAGIRSA*KRVYKY Trigger: GTACTTGTAGACACGTTTTCAGGCAGATCTTATCCC...GGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGAGAAGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACTCCGGGATGACATCCGACTaGAGACTTTCCCACACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TRSLINKHIKKAHLHHNSGMTSD*RLSHTS Trigger: GGAAGTGTGGGAAAGTCTTCAGTCGGATGTCATCCC...GGAGTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCCTCCATAAGCTGGAAGTCCAAGGTGAGCGTAGCAAACTGGTCAGGTTCTATGTTCACTAAGAAATaGCTGGCGGCCAAACACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSISWKSKVSVANWSGSMFTKK*LAAKHF Trigger: AAAGTGTTTGGCCGCCAGTCATTTCTTAGTGAACAT...AGAACCTGACCAGTTTGCTACGCTCACCTTGGACTTCCAGCTTATGGAGGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATGAGGGATAAGATCTaGCTGAAAACGTGTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: LQYLLPKPPACLTKCSQCMRDKI*LKTCLQ Trigger: TTGTAGACACGTTTTCAGGCAGATCTTATCCCTCAT...ACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAGATACTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGTTGCATAGCGCTCTCCTCTAGGATTAAAACCATCCATCTTGGAATGAAGTGGCTCTATCACCCATaGTGCTTTCCCTTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GCCIALSSRIKTIHLGMKWLYHP*CFPFLQ Trigger: TTGGAGAAAGGGAAAGCACCATGGGTGATAGAGCCA...CTTCATTCCAAGATGGATGGTTTTAATCCTAGAGGAGAGCGCTATGCAACACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153840.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTGAGCCTGTGGTGGTGGACATTTCCTATTCAAATCCCAATGTTTGTGCTCTGGCTCTATCACCCATaGTGCTTTCCCTTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: MVSLWWWTFPIQIPMFVLWLYHP*CFPFLQ Trigger: TTGGAGAAAGGGAAAGCACCATGGGTGATAGAGCCA...GAGCACAAACATTGGGATTTGAATAGGAAATGTCCACCACCACAGGCTCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086327.12 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCCTCCATAAGCTGGAAGTCCAAGGTGAGCGTAGCAAACTGGTCAGGTTCTGTTTTGCCTTCTCTGTaGGAACCTTTTGTTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSISWKSKVSVANWSGSVLPSL*EPFVVK Trigger: CTTCACAACAAAAGGTTCCCACAGAGAAGGCAAAAC...AGAACCTGACCAGTTTGCTACGCTCACCTTGGACTTCCAGCTTATGGAGGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACAGGTTTCTCTTCCGAATaGATGTTGAGATGCACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LLPKPPACLTKCSQCIFTGFSSE*MLRCTL Trigger: TAAAGTGCATCTCAACATCCATTCGGAAGAGAAACC...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTTCACTAAGAAATGACTaGCGGCCAAACACTTTACTA | + |
|
Preference number: 4 (lower is better) Translates to: LQYLLPKPPACLTKCSQCSLRND*RPNTLL Trigger: TAGTAAAGTGTTTGGCCGCCAGTCATTTCTTAGTGA...ACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAGATACTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACTCCGGTCTGTCCTCACTGTaGATTCTCTTATGCCGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: TRSLINKHIKKAHLHHNSGLSSL*ILLCRV Trigger: TACGCGGCATAAGAGAATTCACAGTGAGGACAGACC...GGAGTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | CACAGACGAGCTGACTTAAGAGAAATTAGGTTCTCACAGTTCCTCCATAAGCTGATGTCGAATCAGCGATaGGCTCCGACTATAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HRRADLREIRFSQFLHKLMSNQR*APTISL Trigger: AAGGCTTATAGTCGGAGCTCATCGCTGATTCGACAT...CAGCTTATGGAGGAACTGTGAGAACCTAATTTCTCTTAAGTCAGCTCGTCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCCTCCATAAGCTGGAAGTCCAAGGTGAGCGTAGCAAACTGGTCAGGTTCTACTCTTGTTATGTTTTaGCTTCTCTGTGGGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSISWKSKVSVANWSGSTLVMF*LLCGNL Trigger: AAGGTTCCCACAGAGAAGGCAAAACATAACAAGAGT...AGAACCTGACCAGTTTGCTACGCTCACCTTGGACTTCCAGCTTATGGAGGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | ATAGCTTCTCCCTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCCGTGTCTACAAGTACTaGATTCATAAGACCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IASPCSQVSHSSVSPAQARVYKY*IHKTSL Trigger: GAGAGAGGTCTTATGAATGCAGTACTTGTAGACACG...GGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGAGAAGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGCATAGCGCTCTCCTCTAGGATTAAAACCATCCATCTTGGAATGAAGCTCAAGTCACTGGTGCCTTaGATTTTGATTTCCCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CCIALSSRIKTIHLGMKLKSLVP*ILISRG Trigger: TCCGCGGGAAATCAAAATCCAAGGCACCAGTGACTT...GAGCTTCATTCCAAGATGGATGGTTTTAATCCTAGAGGAGAGCGCTATGCAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153840.2 |
||
| CDS-3UTR TCA 90 bp | CAGACCATAAAAACCCAAACACATATCTCAAGAGTAACTTTCAGAGCAAATAGCTGGTGCCTTGGATTTTaGTTTCCCGCGGACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTIKTQTHISRVTFRANSWCLGF*FPADCR Trigger: CCTGCAGTCCGCGGGAAATCAAAATCCAAGGCACCA...GCTATTTGCTCTGAAAGTTACTCTTGAGATATGTGTTTGGGTTTTTATGGTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | ATGGTGAGCCTGTGGTGGTGGACATTTCCTATTCAAATCCCAATGTTTGTGCTCGGGAACCTTTTGTTGTaGAGAAGTTGGTTTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: MVSLWWWTFPIQIPMFVLGNLLL*RSWFLT Trigger: TGTGAGAAACCAACTTCTTCACAACAAAAGGTTCCC...GAGCACAAACATTGGGATTTGAATAGGAAATGTCCACCACCACAGGCTCACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086327.12 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | CACAGACGAGCTGACTTAAGAGAAATTAGGTTCTCACAGTTCCTCCATAAGCTGTCGTACAAATCTTTCTaGATGGGACTCAGCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRRADLREIRFSQFLHKLSYKSF*MGLSHS Trigger: GGAATGGCTGAGTCCCATGCAGAAAGATTTGTACGA...CAGCTTATGGAGGAACTGTGAGAACCTAATTTCTCTTAAGTCAGCTCGTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACAACTTTAAAGATTTCTTaGCTGAATGTTCCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPKPPACLTKCSQCIFTTLKIS*LNVPSW Trigger: CCAAGAAGGAACATTCAGGCAAGAAATCTTTAAAGT...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTGAGCCTGTGGTGGTGGACATTTCCTATTCAAATCCCAATGTTTGTGCTCACAAATCTTTCTGCATaGGACTCAGCCATTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: MVSLWWWTFPIQIPMFVLTNLSA*DSAIPI Trigger: AATGGGAATGGCTGAGTCCCATGCAGAAAGATTTGT...GAGCACAAACATTGGGATTTGAATAGGAAATGTCCACCACCACAGGCTCACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086327.12 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | AAACCCCTTCACTCACAAACCCTGATCCAAAATTCTGAGCATACCTCAGCTGCTCTGAATGTTCCTTCTTaGATTTGCTTGGGACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KPLHSQTLIQNSEHTSAALNVPS*ICLGLN Trigger: GTTCAGTCCCAAGCAAATCCAAGAAGGAACATTCAG...AGCAGCTGAGGTATGCTCAGAATTTTGGATCAGGGTTTGTGAGTGAAGGGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | CAGACCATAAAAACCCAAACACATATCTCAAGAGTAACTTTCAGAGCAAATAGCGGGATGACATCCGACTaGAGACTTTCCCACACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTIKTQTHISRVTFRANSGMTSD*RLSHTS Trigger: GGAAGTGTGGGAAAGTCTTCAGTCGGATGTCATCCC...GCTATTTGCTCTGAAAGTTACTCTTGAGATATGTGTTTGGGTTTTTATGGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | GAAAAGTGGACTCTAGCTCCAGTTCCATCTCATTGTATGCATCCAATAATATGTGGTCTGTCCTCACTGTaGATTCTCTTATGCCGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: EKWTLAPVPSHCMHPIICGLSSL*ILLCRV Trigger: TACGCGGCATAAGAGAATTCACAGTGAGGACAGACC...ACATATTATTGGATGCATACAATGAGATGGAACTGGAGCTAGAGTCCACTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | AGAACACTTACGCTCACTTCCCATGTCTCTGAAATCCTTTTTAGATTTTGCAGATTCTCTCATGGAGAATaGGGGAAATGCGCTGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLTLTSHVSEILFRFCRFSHGE*GKCAER Trigger: TCGCTCAGCGCATTTCCCTCATTCTCCATGAGAGAA...TCTGCAAAATCTAAAAAGGATTTCAGAGACATGGGAAGTGAGCGTAAGTGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACTCCTCGTACAAATCTTTCTaGATGGGACTCAGCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: TRSLINKHIKKAHLHHNSSYKSF*MGLSHS Trigger: GGAATGGCTGAGTCCCATGCAGAAAGATTTGTACGA...GGAGTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTCTGATTAGGATGAATGAGGGAAGACCCTCCCATTGTTGGGTGTTGCATTCGTACAAATCTTTCTaGATGGGACTCAGCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FILIRMNEGRPSHCWVLHSYKSF*MGLSHS Trigger: GGAATGGCTGAGTCCCATGCAGAAAGATTTGTACGA...ATGCAACACCCAACAATGGGAGGGTCTTCCCTCATTCATCCTAATCAGAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153840.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTGAGCCTGTGGTGGTGGACATTTCCTATTCAAATCCCAATGTTTGTGCTCATGAGGGATAAGATCTaGCTGAAAACGTGTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: MVSLWWWTFPIQIPMFVLMRDKI*LKTCLQ Trigger: TTGTAGACACGTTTTCAGGCAGATCTTATCCCTCAT...GAGCACAAACATTGGGATTTGAATAGGAAATGTCCACCACCACAGGCTCACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086327.12 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | GAGACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACATGTTCACTAAGAAATaGCTGGCGGCCAAACACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETRSLINKHIKKAHLHHNMFTKK*LAAKHF Trigger: AAAGTGTTTGGCCGCCAGTCATTTCTTAGTGAACAT...GTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | GAGACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACCGTGTCTACAAGTACTaGATTCATAAGACCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ETRSLINKHIKKAHLHHNRVYKY*IHKTSL Trigger: GAGAGAGGTCTTATGAATGCAGTACTTGTAGACACG...GTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | AAACCCCTTCACTCACAAACCCTGATCCAAAATTCTGAGCATACCTCAGCTGCTTCCACATTCCTTGCATaGAATGAGTTTCTTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPLHSQTLIQNSEHTSAASTFLA*NEFLFP Trigger: AGGAAAAAGAAACTCATTGCATGCAAGGAATGTGGA...AGCAGCTGAGGTATGCTCAGAATTTTGGATCAGGGTTTGTGAGTGAAGGGGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAGTGGACTCTAGCTCCAGTTCCATCTCATTGTATGCATCCAATAATATGTTGGCTCTATCACCCATaGTGCTTTCCCTTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EKWTLAPVPSHCMHPIICWLYHP*CFPFLQ Trigger: TTGGAGAAAGGGAAAGCACCATGGGTGATAGAGCCA...ACATATTATTGGATGCATACAATGAGATGGAACTGGAGCTAGAGTCCACTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACTCCGTTTTGCCTTCTCTGTaGGAACCTTTTGTTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TRSLINKHIKKAHLHHNSVLPSL*EPFVVK Trigger: CTTCACAACAAAAGGTTCCCACAGAGAAGGCAAAAC...GGAGTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | GAGACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACCTGAATGTTCCTTCTTaGATTTGCTTGGGACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ETRSLINKHIKKAHLHHNLNVPS*ICLGLN Trigger: GTTCAGTCCCAAGCAAATCCAAGAAGGAACATTCAG...GTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | CACAGACGAGCTGACTTAAGAGAAATTAGGTTCTCACAGTTCCTCCATAAGCTGTCACTAAGAAATGACTaGCGGCCAAACACTTTACTA | + |
|
Preference number: 4 (lower is better) Translates to: HRRADLREIRFSQFLHKLSLRND*RPNTLL Trigger: TAGTAAAGTGTTTGGCCGCCAGTCATTTCTTAGTGA...CAGCTTATGGAGGAACTGTGAGAACCTAATTTCTCTTAAGTCAGCTCGTCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | GAAAAGTGGACTCTAGCTCCAGTTCCATCTCATTGTATGCATCCAATAATATGTCTTGGCCCAGATTTGTaGCATGAATTTGGTGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: EKWTLAPVPSHCMHPIICLGPDL*HEFGGN Trigger: GTTACCACCAAATTCATGTCACAAATCTGGGCCAAG...ACATATTATTGGATGCATACAATGAGATGGAACTGGAGCTAGAGTCCACTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | ACATGTGAGGTTTGCGATGGCACAAATATCCAGACCATAAAAACCCAAACACATGGGAACCTTTTGTTGTaGAGAAGTTGGTTTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TCEVCDGTNIQTIKTQTHGNLLL*RSWFLT Trigger: TGTGAGAAACCAACTTCTTCACAACAAAAGGTTCCC...ATGTGTTTGGGTTTTTATGGTCTGGATATTTGTGCCATCGCAAACCTCACATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | GAGACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACGGACTGGCTGCTTTTTaGAGCCTCTTTTGTATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ETRSLINKHIKKAHLHHNGLAAF*SLFCIY Trigger: ATAAATACAAAAGAGGCTTCAAAAAGCAGCCAGTCC...GTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | GAGACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACACTCTTGTTATGTTTTaGCTTCTCTGTGGGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETRSLINKHIKKAHLHHNTLVMF*LLCGNL Trigger: AAGGTTCCCACAGAGAAGGCAAAACATAACAAGAGT...GTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | ACATGTGAGGTTTGCGATGGCACAAATATCCAGACCATAAAAACCCAAACACATGTTCCTTCTTGGATTTaGTTGGGACTGAACTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TCEVCDGTNIQTIKTQTHVPSWI*LGLNSC Trigger: ACAAGAGTTCAGTCCCAAGCAAATCCAAGAAGGAAC...ATGTGTTTGGGTTTTTATGGTCTGGATATTTGTGCCATCGCAAACCTCACATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTGAGCCTGTGGTGGTGGACATTTCCTATTCAAATCCCAATGTTTGTGCTCACTTTAAAGATTTCTTaGCTGAATGTTCCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MVSLWWWTFPIQIPMFVLTLKIS*LNVPSW Trigger: CCAAGAAGGAACATTCAGGCAAGAAATCTTTAAAGT...GAGCACAAACATTGGGATTTGAATAGGAAATGTCCACCACCACAGGCTCACCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086327.12 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | CAGACCATAAAAACCCAAACACATATCTCAAGAGTAACTTTCAGAGCAAATAGCTGGCTCTATCACCCATaGTGCTTTCCCTTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QTIKTQTHISRVTFRANSWLYHP*CFPFLQ Trigger: TTGGAGAAAGGGAAAGCACCATGGGTGATAGAGCCA...GCTATTTGCTCTGAAAGTTACTCTTGAGATATGTGTTTGGGTTTTTATGGTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | ACATGTGAGGTTTGCGATGGCACAAATATCCAGACCATAAAAACCCAAACACATGTTTTGCCTTCTCTGTaGGAACCTTTTGTTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCEVCDGTNIQTIKTQTHVLPSL*EPFVVK Trigger: CTTCACAACAAAAGGTTCCCACAGAGAAGGCAAAAC...ATGTGTTTGGGTTTTTATGGTCTGGATATTTGTGCCATCGCAAACCTCACATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTTAAACGGCACGTGCAGAAGAGAACATGTAAAAGAACCTCTTTGTATATAGGGATAAGATCTGCCTaGAAACGTGTCTACAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLKRHVQKRTCKRTSLYIGIRSA*KRVYKY Trigger: GTACTTGTAGACACGTTTTCAGGCAGATCTTATCCC...TATATACAAAGAGGTTCTTTTACATGTTCTCTTCTGCACGTGCCGTTTAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086327.12 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | CACAGACGAGCTGACTTAAGAGAAATTAGGTTCTCACAGTTCCTCCATAAGCTGACTTTAAAGATTTCTTaGCTGAATGTTCCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRRADLREIRFSQFLHKLTLKIS*LNVPSW Trigger: CCAAGAAGGAACATTCAGGCAAGAAATCTTTAAAGT...CAGCTTATGGAGGAACTGTGAGAACCTAATTTCTCTTAAGTCAGCTCGTCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | GTTTGCGATGGCACAAATATCCAGACCATAAAAACCCAAACACATATCTCAAGAGGTTTCTCTTCCGAATaGATGTTGAGATGCACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VCDGTNIQTIKTQTHISRGFSSE*MLRCTL Trigger: TAAAGTGCATCTCAACATCCATTCGGAAGAGAAACC...TCTTGAGATATGTGTTTGGGTTTTTATGGTCTGGATATTTGTGCCATCGCAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTTAAACGGCACGTGCAGAAGAGAACATGTAAAAGAACCTCTTTGTATATAGGACTGGCTGCTTTTTaGAGCCTCTTTTGTATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLKRHVQKRTCKRTSLYIGLAAF*SLFCIY Trigger: ATAAATACAAAAGAGGCTTCAAAAAGCAGCCAGTCC...TATATACAAAGAGGTTCTTTTACATGTTCTCTTCTGCACGTGCCGTTTAAGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086327.12 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | GTTTGCGATGGCACAAATATCCAGACCATAAAAACCCAAACACATATCTCAAGATCCACATTCCTTGCATaGAATGAGTTTCTTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VCDGTNIQTIKTQTHISRSTFLA*NEFLFP Trigger: AGGAAAAAGAAACTCATTGCATGCAAGGAATGTGGA...TCTTGAGATATGTGTTTGGGTTTTTATGGTCTGGATATTTGTGCCATCGCAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR GCA 90 bp | GAAAAGTGGACTCTAGCTCCAGTTCCATCTCATTGTATGCATCCAATAATATGTTCCACATTCCTTGCATaGAATGAGTTTCTTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EKWTLAPVPSHCMHPIICSTFLA*NEFLFP Trigger: AGGAAAAAGAAACTCATTGCATGCAAGGAATGTGGA...ACATATTATTGGATGCATACAATGAGATGGAACTGGAGCTAGAGTCCACTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CCA 90 bp | CAGACCATAAAAACCCAAACACATATCTCAAGAGTAACTTTCAGAGCAAATAGCTCACTAAGAAATGACTaGCGGCCAAACACTTTACTA | + |
|
Preference number: 4 (lower is better) Translates to: QTIKTQTHISRVTFRANSSLRND*RPNTLL Trigger: TAGTAAAGTGTTTGGCCGCCAGTCATTTCTTAGTGA...GCTATTTGCTCTGAAAGTTACTCTTGAGATATGTGTTTGGGTTTTTATGGTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACAAAAGTCACTGGTGCCTaGGATTTTGATTTCCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLPKPPACLTKCSQCIFTKVTGA*DFDFPR Trigger: CCGCGGGAAATCAAAATCCAAGGCACCAGTGACTTT...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | GGGTGTTGCATAGCGCTCTCCTCTAGGATTAAAACCATCCATCTTGGAATGAAGCTGGTGCCTTGGATTTaGATTTCCCGCGGACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GCCIALSSRIKTIHLGMKLVPWI*ISRGLQ Trigger: CTGCAGTCCGCGGGAAATCAAAATCCAAGGCACCAG...CTTCATTCCAAGATGGATGGTTTTAATCCTAGAGGAGAGCGCTATGCAACACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153840.2 |
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| CDS-3UTR CAA 90 bp | CACAGACGAGCTGACTTAAGAGAAATTAGGTTCTCACAGTTCCTCCATAAGCTGCTGGTGCCTTGGATTTaGATTTCCCGCGGACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRRADLREIRFSQFLHKLLVPWI*ISRGLQ Trigger: CTGCAGTCCGCGGGAAATCAAAATCCAAGGCACCAG...CAGCTTATGGAGGAACTGTGAGAACCTAATTTCTCTTAAGTCAGCTCGTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCAACTCTTGTTATGTTTaGCCTTCTCTGTGGGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSSFSFFSISCPSPQPVNSCYV*PSLWEP Trigger: AGGTTCCCACAGAGAAGGCAAAACATAACAAGAGTT...GACAGGCTGGGGGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACACCTGAATGTTCCTTCTaGGATTTGCTTGGGACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLPKPPACLTKCSQCIFTPECSF*DLLGTE Trigger: TTCAGTCCCAAGCAAATCCAAGAAGGAACATTCAGG...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACACTTGGGACTGAACTCTaGTTATGTTTTGCCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLPKPPACLTKCSQCIFTLGTEL*LCFAFS Trigger: AGAGAAGGCAAAACATAACAAGAGTTCAGTCCCAAG...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | ATAGCTTCTCCCTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCCCTGAATGTTCCTTCTaGGATTTGCTTGGGACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IASPCSQVSHSSVSPAQAPECSF*DLLGTE Trigger: TTCAGTCCCAAGCAAATCCAAGAAGGAACATTCAGG...GGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGAGAAGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | AGAACACTTACGCTCACTTCCCATGTCTCTGAAATCCTTTTTAGATTTTGCAGACTGGTGCCTTGGATTTaGATTTCCCGCGGACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RTLTLTSHVSEILFRFCRLVPWI*ISRGLQ Trigger: CTGCAGTCCGCGGGAAATCAAAATCCAAGGCACCAG...TCTGCAAAATCTAAAAAGGATTTCAGAGACATGGGAAGTGAGCGTAAGTGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAGTATCTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATTTGTGACATGAATTaGGTGGTAACTTCTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQYLLPKPPACLTKCSQCICDMN*VVTSWS Trigger: AGACCAAGAAGTTACCACCAAATTCATGTCACAAAT...ACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAGATACTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACAATTTGTGACATGAATTaGGTGGTAACTTCTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLPKPPACLTKCSQCIFTICDMN*VVTSWS Trigger: AGACCAAGAAGTTACCACCAAATTCATGTCACAAAT...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTGCCCAAGCCCCCAGCCTGTCTTACTAAATGTTCGCAGTGTATCTTCACACACTTTAAAGATTTCTaGCCTGAATGTTCCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLPKPPACLTKCSQCIFTHFKDF*PECSFL Trigger: CAAGAAGGAACATTCAGGCAAGAAATCTTTAAAGTG...TGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCCTCCATAAGCTGGAAGTCCAAGGTGAGCGTAGCAAACTGGTCAGGTTCTATTTGTGACATGAATTaGGTGGTAACTTCTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSISWKSKVSVANWSGSICDMN*VVTSWS Trigger: AGACCAAGAAGTTACCACCAAATTCATGTCACAAAT...AGAACCTGACCAGTTTGCTACGCTCACCTTGGACTTCCAGCTTATGGAGGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | CACAGACGAGCTGACTTAAGAGAAATTAGGTTCTCACAGTTCCTCCATAAGCTGCCTGAATGTTCCTTCTaGGATTTGCTTGGGACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HRRADLREIRFSQFLHKLPECSF*DLLGTE Trigger: TTCAGTCCCAAGCAAATCCAAGAAGGAACATTCAGG...CAGCTTATGGAGGAACTGTGAGAACCTAATTTCTCTTAAGTCAGCTCGTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | ATAGCTTCTCCCTGCTCTCAAGTTTCTCATTCTTCAGTATCTCCTGCCCAAGCCAGGACTGGCTGCTTTTaGAAGCCTCTTTTGTATTTA | + |
|
Preference number: 5 (lower is better) Translates to: IASPCSQVSHSSVSPAQARTGCF*KPLLYL Trigger: TAAATACAAAAGAGGCTTCAAAAAGCAGCCAGTCCT...GGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGAGAAGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS GCA 90 bp | TCTCTGTGGGAACCTTTTGTTGTGAAGAAGTTGGTTTCTCACAGATaGTTGGCCCAGATTTGTGACATGAATTTGGTGGTAACTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLWEPFVVKKLVSHR*LAQICDMNLVVTSW Trigger: CCAAGAAGTTACCACCAAATTCATGTCACAAATCTGGGCCAAGCATCTGTGAGAAACCAACTTCTTCACAACAAAAGGTTCCCACAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | AAACCCCTTCACTCACAAACCCTGATCCAAAATTCTGAGCATACCTCAGCTGCTAGGACTGGCTGCTTTTaGAAGCCTCTTTTGTATTTA | + |
|
Preference number: 5 (lower is better) Translates to: KPLHSQTLIQNSEHTSAARTGCF*KPLLYL Trigger: TAAATACAAAAGAGGCTTCAAAAAGCAGCCAGTCCT...AGCAGCTGAGGTATGCTCAGAATTTTGGATCAGGGTTTGTGAGTGAAGGGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS TCA 90 bp | TGTTGTGAAGAAGTTGGTTTCTCACAGATGCTTGGCCCAGATTTGTaGCATGAATTTGGTGGTAACTTCTTGGTCTCATACTTAGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: CCEEVGFSQMLGPDL*HEFGGNFLVSYLDP Trigger: AGGGTCTAAGTATGAGACCAAGAAGTTACCACCAAATTCATGTCACAAATCTGGGCCAAGCATCTGTGAGAAACCAACTTCTTCACAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS CCA 90 bp | TGGATTTGCTTGGGACTGAACTCTTGTTATGTTTTGCCTTCTCTGTaGGAACCTTTTGTTGTGAAGAAGTTGGTTTCTCACAGATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WICLGLNSCYVLPSL*EPFVVKKLVSHRCL Trigger: CAAGCATCTGTGAGAAACCAACTTCTTCACAACAAAAGGTTCCCACAGAGAAGGCAAAACATAACAAGAGTTCAGTCCCAAGCAAATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | CAGACCATAAAAACCCAAACACATATCTCAAGAGTAACTTTCAGAGCAAATAGCAAAGTCACTGGTGCCTaGGATTTTGATTTCCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QTIKTQTHISRVTFRANSKVTGA*DFDFPR Trigger: CCGCGGGAAATCAAAATCCAAGGCACCAGTGACTTT...GCTATTTGCTCTGAAAGTTACTCTTGAGATATGTGTTTGGGTTTTTATGGTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACTCCTTTGGTGGTAACTTCTaGGTCTCATACTTAGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: TRSLINKHIKKAHLHHNSFGGNF*VSYLDP Trigger: AGGGTCTAAGTATGAGACCAAGAAGTTACCACCAAA...GGAGTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACTCCAACTCTTGTTATGTTTaGCCTTCTCTGTGGGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: TRSLINKHIKKAHLHHNSNSCYV*PSLWEP Trigger: AGGTTCCCACAGAGAAGGCAAAACATAACAAGAGTT...GGAGTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS-3UTR CAA 90 bp | GAGACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACCTTGGGACTGAACTCTaGTTATGTTTTGCCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: ETRSLINKHIKKAHLHHNLGTEL*LCFAFS Trigger: AGAGAAGGCAAAACATAACAAGAGTTCAGTCCCAAG...GTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS-3UTR CAA 90 bp | ATGGTGAGCCTGTGGTGGTGGACATTTCCTATTCAAATCCCAATGTTTGTGCTCCACTTTAAAGATTTCTaGCCTGAATGTTCCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: MVSLWWWTFPIQIPMFVLHFKDF*PECSFL Trigger: CAAGAAGGAACATTCAGGCAAGAAATCTTTAAAGTG...GAGCACAAACATTGGGATTTGAATAGGAAATGTCCACCACCACAGGCTCACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086327.12 ENSMUST00000170776.8 |
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| CDS-3UTR CAA 90 bp | ACATGTGAGGTTTGCGATGGCACAAATATCCAGACCATAAAAACCCAAACACATAACTCTTGTTATGTTTaGCCTTCTCTGTGGGAACCT | + |
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Preference number: 5 (lower is better) Translates to: TCEVCDGTNIQTIKTQTHNSCYV*PSLWEP Trigger: AGGTTCCCACAGAGAAGGCAAAACATAACAAGAGTT...ATGTGTTTGGGTTTTTATGGTCTGGATATTTGTGCCATCGCAAACCTCACATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS-3UTR CAA 90 bp | GTTTGCGATGGCACAAATATCCAGACCATAAAAACCCAAACACATATCTCAAGATTTGGTGGTAACTTCTaGGTCTCATACTTAGACCCT | + |
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Preference number: 5 (lower is better) Translates to: VCDGTNIQTIKTQTHISRFGGNF*VSYLDP Trigger: AGGGTCTAAGTATGAGACCAAGAAGTTACCACCAAA...TCTTGAGATATGTGTTTGGGTTTTTATGGTCTGGATATTTGTGCCATCGCAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS-3UTR CAA 90 bp | AGAACACTTACGCTCACTTCCCATGTCTCTGAAATCCTTTTTAGATTTTGCAGATTTGGTGGTAACTTCTaGGTCTCATACTTAGACCCT | + |
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Preference number: 5 (lower is better) Translates to: RTLTLTSHVSEILFRFCRFGGNF*VSYLDP Trigger: AGGGTCTAAGTATGAGACCAAGAAGTTACCACCAAA...TCTGCAAAATCTAAAAAGGATTTCAGAGACATGGGAAGTGAGCGTAAGTGTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS-3UTR CAA 90 bp | AGAACACTTACGCTCACTTCCCATGTCTCTGAAATCCTTTTTAGATTTTGCAGACTTGGGACTGAACTCTaGTTATGTTTTGCCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: RTLTLTSHVSEILFRFCRLGTEL*LCFAFS Trigger: AGAGAAGGCAAAACATAACAAGAGTTCAGTCCCAAG...TCTGCAAAATCTAAAAAGGATTTCAGAGACATGGGAAGTGAGCGTAAGTGTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS-3UTR CAA 90 bp | GAGACAAGGTCTCTGATCAATAAACATATCAAAAAGGCCCATCTGCACCACAACCACTTTAAAGATTTCTaGCCTGAATGTTCCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: ETRSLINKHIKKAHLHHNHFKDF*PECSFL Trigger: CAAGAAGGAACATTCAGGCAAGAAATCTTTAAAGTG...GTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS GCA 90 bp | GATTACACTTTAAAGATTTCTTGCCTGAATGTTCCTTCTTGGATTTaGTTGGGACTGAACTCTTGTTATGTTTTGCCTTCTCTGTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: DYTLKISCLNVPSWI*LGLNSCYVLPSLWE Trigger: TTCCCACAGAGAAGGCAAAACATAACAAGAGTTCAGTCCCAAGCAAATCCAAGAAGGAACATTCAGGCAAGAAATCTTTAAAGTGTAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS TCA 72 bp | TTAAGGCACAGGATATTCAGGACCCCAGCGCCTTCTTaGTGGCTCTATCACCCATGGTGCTTTCCCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LRHRIFRTPAPS*WLYHPWCFPFL Trigger: GAGAAAGGGAAAGCACCATGGGTGATAGAGCCATCAAGAAGGCGCTGGGGTCCTGAATATCCTGTGCCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153840.2 |
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| CDS CAA 72 bp | TTGCCTTCTCTGTGGGAACCTTTTGTTGTGAAGAAGTaGGTTTCTCACAGATGCTTGGCCCAGATTTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: LPSLWEPFVVKK*VSHRCLAQICD Trigger: GTCACAAATCTGGGCCAAGCATCTGTGAGAAACCAACTTCTTCACAACAAAAGGTTCCCACAGAGAAGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS TCA 72 bp | GTTATGTTTTGCCTTCTCTGTGGGAACCTTTTGTTGTaGAGAAGTTGGTTTCTCACAGATGCTTGGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: VMFCLLCGNLLL*RSWFLTDAWPR Trigger: TCTGGGCCAAGCATCTGTGAGAAACCAACTTCTTCACAACAAAAGGTTCCCACAGAGAAGGCAAAACATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS TCA 72 bp | GAAGTTGGTTTCTCACAGATGCTTGGCCCAGATTTGTaGCATGAATTTGGTGGTAACTTCTTGGTCTCATAC | + |
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Preference number: 6 (lower is better) Translates to: EVGFSQMLGPDL*HEFGGNFLVSY Trigger: GTATGAGACCAAGAAGTTACCACCAAATTCATGTCACAAATCTGGGCCAAGCATCTGTGAGAAACCAACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS GCA 72 bp | GAACCTTTTGTTGTGAAGAAGTTGGTTTCTCACAGATaGTTGGCCCAGATTTGTGACATGAATTTGGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: EPFVVKKLVSHR*LAQICDMNLVV Trigger: TACCACCAAATTCATGTCACAAATCTGGGCCAAGCATCTGTGAGAAACCAACTTCTTCACAACAAAAGGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS CCA 72 bp | TTGGGACTGAACTCTTGTTATGTTTTGCCTTCTCTGTaGGAACCTTTTGTTGTGAAGAAGTTGGTTTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: LGLNSCYVLPSL*EPFVVKKLVSH Trigger: GTGAGAAACCAACTTCTTCACAACAAAAGGTTCCCACAGAGAAGGCAAAACATAACAAGAGTTCAGTCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS CAA 72 bp | TCTTGGATTTGCTTGGGACTGAACTCTTGTTATGTTTaGCCTTCTCTGTGGGAACCTTTTGTTGTGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SWICLGLNSCYV*PSLWEPFVVKK Trigger: CTTCTTCACAACAAAAGGTTCCCACAGAGAAGGCAAAACATAACAAGAGTTCAGTCCCAAGCAAATCCAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS CAA 90 bp | AATGTTCCTTCTTGGATTTGCTTGGGACTGAACTCTTGTTATGTTTaGCCTTCTCTGTGGGAACCTTTTGTTGTGAAGAAGTTGGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: NVPSWICLGLNSCYV*PSLWEPFVVKKLVS Trigger: AGAAACCAACTTCTTCACAACAAAAGGTTCCCACAGAGAAGGCAAAACATAACAAGAGTTCAGTCCCAAGCAAATCCAAGAAGGAACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS CAA 90 bp | TACACTTTAAAGATTTCTTGCCTGAATGTTCCTTCTTGGATTTGCTaGGGACTGAACTCTTGTTATGTTTTGCCTTCTCTGTGGGAACCT | + |
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Preference number: 6 (lower is better) Translates to: YTLKISCLNVPSWIC*GLNSCYVLPSLWEP Trigger: AGGTTCCCACAGAGAAGGCAAAACATAACAAGAGTTCAGTCCCAAGCAAATCCAAGAAGGAACATTCAGGCAAGAAATCTTTAAAGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS CAA 72 bp | AAGATTTCTTGCCTGAATGTTCCTTCTTGGATTTGCTaGGGACTGAACTCTTGTTATGTTTTGCCTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: KISCLNVPSWIC*GLNSCYVLPSL Trigger: CAGAGAAGGCAAAACATAACAAGAGTTCAGTCCCAAGCAAATCCAAGAAGGAACATTCAGGCAAGAAATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS CAA 90 bp | AGATTACACTTTAAAGATTTCTTGCCTGAATGTTCCTTCTTGGATTaGCTTGGGACTGAACTCTTGTTATGTTTTGCCTTCTCTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: RLHFKDFLPECSFLD*LGTELLLCFAFSVG Trigger: TCCCACAGAGAAGGCAAAACATAACAAGAGTTCAGTCCCAAGCAAATCCAAGAAGGAACATTCAGGCAAGAAATCTTTAAAGTGTAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS GCA 72 bp | AGGTTTTCCCACAAAGATTACACTTTAAAGATTTCTTaGCTGAATGTTCCTTCTTGGATTTGCTTGGGACTG | + |
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Preference number: 6 (lower is better) Translates to: RFSHKDYTLKIS*LNVPSWICLGL Trigger: CAGTCCCAAGCAAATCCAAGAAGGAACATTCAGGCAAGAAATCTTTAAAGTGTAATCTTTGTGGGAAAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS CAA 90 bp | CCACAAAGATTACACTTTAAAGATTTCTTGCCTGAATGTTCCTTCTaGGATTTGCTTGGGACTGAACTCTTGTTATGTTTTGCCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: PQRLHFKDFLPECSF*DLLGTELLLCFAFS Trigger: AGAGAAGGCAAAACATAACAAGAGTTCAGTCCCAAGCAAATCCAAGAAGGAACATTCAGGCAAGAAATCTTTAAAGTGTAATCTTTGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS GCA 72 bp | TTAAAGATTTCTTGCCTGAATGTTCCTTCTTGGATTTaGTTGGGACTGAACTCTTGTTATGTTTTGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LKISCLNVPSWI*LGLNSCYVLPS Trigger: AGAAGGCAAAACATAACAAGAGTTCAGTCCCAAGCAAATCCAAGAAGGAACATTCAGGCAAGAAATCTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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| CDS CAA 72 bp | TTTAAAGATTTCTTGCCTGAATGTTCCTTCTTGGATTaGCTTGGGACTGAACTCTTGTTATGTTTTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: FKDFLPECSFLD*LGTELLLCFAF Trigger: GAAGGCAAAACATAACAAGAGTTCAGTCCCAAGCAAATCCAAGAAGGAACATTCAGGCAAGAAATCTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086327.12 ENSMUST00000108562.2 ENSMUST00000170776.8 |
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