Pregenerated sensors for ZFP664 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079215Ensembl transcript IDs: ENSMUST00000111417.9
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCCTCGGTGGAGGGGGAAAGGCAGTGATCAGTGGGCCAAAGGCTTaGCTGCAGGTCTCCACTAAAAGGCATGGTGACACTCACTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: ALGGGGKAVISGPKA*LQVSTKRHGDTHSS Trigger: TGAAGAGTGAGTGTCACCATGCCTTTTAGTGGAGACCTGCAGGCAAGCCTTTGGCCCACTGATCACTGCCTTTCCCCCTCCACCGAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR TCA 90 bp | CACAGCAGGCAGGTGACTGAGCGGCTGGGCAAGGCTCCTGAGTTCTaGGTATTATTTCAACTCTGTGGCATGTTGCCAGTCTCAGGAATC | + |
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Preference number: 1 (lower is better) Translates to: HSRQVTERLGKAPEF*VLFQLCGMLPVSGI Trigger: GATTCCTGAGACTGGCAACATGCCACAGAGTTGAAATAATACTCAGAACTCAGGAGCCTTGCCCAGCCGCTCAGTCACCTGCCTGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR GCA 90 bp | ACTGCATGTGGAGGACGGAGAATAGGAACGAGAAGGAAACGGAACTaGGAGCTTTGTGTTGGTGTCACTGGGGACTTTTGGTCTCGACAT | + |
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Preference number: 1 (lower is better) Translates to: TACGGRRIGTRRKRN*ELCVGVTGDFWSRH Trigger: ATGTCGAGACCAAAAGTCCCCAGTGACACCAACACAAAGCTCGCAGTTCCGTTTCCTTCTCGTTCCTATTCTCCGTCCTCCACATGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR GCA 90 bp | ATGTTGCCAGTCTCAGGAATCACCACACCTGTGACAGGGACAGAGTaGTCCATCCTGGGCAAATACAGAGAAGAACTCCGAGTTCACAAA | + |
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Preference number: 1 (lower is better) Translates to: MLPVSGITTPVTGTE*SILGKYREELRVHK Trigger: TTTGTGAACTCGGAGTTCTTCTCTGTATTTGCCCAGGATGGAGCACTCTGTCCCTGTCACAGGTGTGGTGATTCCTGAGACTGGCAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR CCA 90 bp | ACGGAGAATAGGAACGAGAAGGAAACGGAACTGCGAGCTTTGTGTTaGTGTCACTGGGGACTTTTGGTCTCGACATCTCTTGAGTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: TENRNEKETELRALC*CHWGLLVSTSLEFF Trigger: GAAGAACTCAAGAGATGTCGAGACCAAAAGTCCCCAGTGACACCAACACAAAGCTCGCAGTTCCGTTTCCTTCTCGTTCCTATTCTCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR TCA 90 bp | CACCCACTTCAAATTTGCAGGTCATTAGTTTCCCCAAAGACTTCCTaGGCAAAGGACTGCATGTGGAGGACGGAGAATAGGAACGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: HPLQICRSLVSPKTS*AKDCMWRTENRNEK Trigger: CTTCTCGTTCCTATTCTCCGTCCTCCACATGCAGTCCTTTGCTCAGGAAGTCTTTGGGGAAACTAATGACCTGCAAATTTGAAGTGGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR CCA 90 bp | AGGAACGAGAAGGAAACGGAACTGCGAGCTTTGTGTTGGTGTCACTaGGGACTTTTGGTCTCGACATCTCTTGAGTTCTTCCATGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: RNEKETELRALCWCH*GLLVSTSLEFFHEF Trigger: AAACTCATGGAAGAACTCAAGAGATGTCGAGACCAAAAGTCCCCAGTGACACCAACACAAAGCTCGCAGTTCCGTTTCCTTCTCGTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR CCA 90 bp | AAAGTCTATCCAGGCTTTTCTCTAATGCTCCACGCTGTGGTGACATaGAAGTGTAAGACACTACAGGAAATCACTGTGGTGGTTGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: KVYPGFSLMLHAVVT*KCKTLQEITVVVVR Trigger: CCTCACAACCACCACAGTGATTTCCTGTAGTGTCTTACACTTCCATGTCACCACAGCGTGGAGCATTAGAGAAAAGCCTGGATAGACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR GCA 90 bp | GAACTTCATGATCCAGTGGCATTCCCAGCACCCAGTACATGTCCGACACCTAGGAGCCCCACAAGGGAGTaGCTGGCACTGCCCGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: ELHDPVAFPAPSTCPTPRSPTRE*LALPGS Trigger: GCTTCCGGGCAGTGCCAGGCACTCCCTTGTGGGGCT...CCTAGGTGTCGGACATGTACTGGGTGCTGGGAATGCCACTGGATCATGAAGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTTGTGAGGCCAGGAAGGGGCTTTGTCAGCCAATAGCCCTCGGTGGAGGGCAGTGTAGGTGGATTTaGGGTTTCCTTCCTAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: GGCEARKGLCQPIALGGGQCRWI*GFLPSG Trigger: GCCACTAGGAAGGAAACCTCAAATCCACCTACACTG...CCCTCCACCGAGGGCTATTGGCTGACAAAGCCCCTTCCTGGCCTCACAACCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR CCA 90 bp | GAACTTCATGATCCAGTGGCATTCCCAGCACCCAGTACATGTCCGACACCTAGGCCACAAGGGAGTGCCTaGCACTGCCCGGAAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: ELHDPVAFPAPSTCPTPRPQGSA*HCPEAQ Trigger: CTGTGCTTCCGGGCAGTGCCAGGCACTCCCTTGTGG...CCTAGGTGTCGGACATGTACTGGGTGCTGGGAATGCCACTGGATCATGAAGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR TCA 90 bp | CTCTATCAACTAAAAGTCTATCCAGGCTTTTCTCTAATGCTCCACGCTGTGGTGCAGCAGGCAGGTGACTaGGCGGCTGGGCAAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: LYQLKVYPGFSLMLHAVVQQAGD*AAGQGS Trigger: GGAGCCTTGCCCAGCCGCTCAGTCACCTGCCTGCTG...CACCACAGCGTGGAGCATTAGAGAAAAGCCTGGATAGACTTTTAGTTGATAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR TCA 90 bp | GTTAACCACTTTTATCCTGTCTCCTCCAGAGGTGAACTTCATGATCCAGTGGCAAGCACAGCAGGCAGGTaGCTGAGCGGCTGGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: VNHFYPVSSRGELHDPVASTAGR*LSGWAR Trigger: CCTTGCCCAGCCGCTCAGTCACCTGCCTGCTGTGCT...TGCCACTGGATCATGAAGTTCACCTCTGGAGGAGACAGGATAAAAGTGGTTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR TCA 90 bp | CCACCAAGCCAGTCACCCACTTCAAATTTGCAGGTCATTAGTTTCCCCAAAGACACTGCTCCCTTCACCTaGCCCCAGCACCTTCAGCGC | + |
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Preference number: 2 (lower is better) Translates to: PPSQSPTSNLQVISFPKDTAPFT*PQHLQR Trigger: GCGCTGAAGGTGCTGGGGTCAGGTGAAGGGAGCAGT...GTCTTTGGGGAAACTAATGACCTGCAAATTTGAAGTGGGTGACTGGCTTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR TCA 90 bp | TATCCTGTCTCCTCCAGAGGTGAACTTCATGATCCAGTGGCATTCCCAGCACCCCAGATTCATCCTCAGTaGCTTCCCCATCAGCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: YPVSSRGELHDPVAFPAPQIHPQ*LPHQPS Trigger: AGAGGGCTGATGGGGAAGTCACTGAGGATGAATCTG...GGGTGCTGGGAATGCCACTGGATCATGAAGTTCACCTCTGGAGGAGACAGGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR GCA 90 bp | TATCCTGTCTCCTCCAGAGGTGAACTTCATGATCCAGTGGCATTCCCAGCACCCGTGACAGGGACAGAGTaGTCCATCCTGGGCAAATAC | + |
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Preference number: 2 (lower is better) Translates to: YPVSSRGELHDPVAFPAPVTGTE*SILGKY Trigger: GTATTTGCCCAGGATGGAGCACTCTGTCCCTGTCAC...GGGTGCTGGGAATGCCACTGGATCATGAAGTTCACCTCTGGAGGAGACAGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR GCA 90 bp | GGTGGTTGTGAGGCCAGGAAGGGGCTTTGTCAGCCAATAGCCCTCGGTGGAGGGAAGCTCAGTTTTGCTTaGTTCTTCCTCCCTGATATA | + |
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Preference number: 2 (lower is better) Translates to: GGCEARKGLCQPIALGGGKLSFA*FFLPDI Trigger: TATATCAGGGAGGAAGAAGCAAGCAAAACTGAGCTT...CCCTCCACCGAGGGCTATTGGCTGACAAAGCCCCTTCCTGGCCTCACAACCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR CCA 90 bp | GCTATGTCAGGGCAACCTCAGCAATACCAGAACTCGGCCTTCCGGGAGCTGTCCTGCTGTAGATGTTCCTaGGTTCAGTGTAGGTGGATT | + |
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Preference number: 2 (lower is better) Translates to: AMSGQPQQYQNSAFRELSCCRCS*VQCRWI Trigger: AATCCACCTACACTGAACCCAGGAACATCTACAGCA...GGACAGCTCCCGGAAGGCCGAGTTCTGGTATTGCTGAGGTTGCCCTGACATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTTGTGAGGCCAGGAAGGGGCTTTGTCAGCCAATAGCCCTCGGTGGAGGGAACTTAGAGACACAGTaGTTAGCAGAGTTCACAAAA | + |
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Preference number: 2 (lower is better) Translates to: GGCEARKGLCQPIALGGGNLETQ*LAEFTK Trigger: TTTTGTGAACTCTGCTAATCACTGTGTCTCTAAGTT...CCCTCCACCGAGGGCTATTGGCTGACAAAGCCCCTTCCTGGCCTCACAACCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR GCA 90 bp | CCACCAAGCCAGTCACCCACTTCAAATTTGCAGGTCATTAGTTTCCCCAAAGACAGCCAGCAGCACCTGTaGTGTGTCCTGTCACTGCTC | + |
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Preference number: 2 (lower is better) Translates to: PPSQSPTSNLQVISFPKDSQQHL*CVLSLL Trigger: GAGCAGTGACAGGACACAGCACAGGTGCTGCTGGCT...GTCTTTGGGGAAACTAATGACCTGCAAATTTGAAGTGGGTGACTGGCTTGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR TCA 90 bp | CTCTATCAACTAAAAGTCTATCCAGGCTTTTCTCTAATGCTCCACGCTGTGGTGTTCAACCCCAGCCGCTaGCTATGTGCTTCCACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LYQLKVYPGFSLMLHAVVFNPSR*LCASTK Trigger: CTTTGTGGAAGCACATAGTCAGCGGCTGGGGTTGAA...CACCACAGCGTGGAGCATTAGAGAAAAGCCTGGATAGACTTTTAGTTGATAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCATTCTGTGAGAAAGCTAGACCTGAAGGTTAAGCGATTTGCCCAAGCTTACCGAAAGGGTCACTCTTaGAGAAGGCAAGCTCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: PHSVRKLDLKVKRFAQAYRKGHS*RRQAQF Trigger: AAACTGAGCTTGCCTTCTTCAAGAGTGACCCTTTCG...GTAAGCTTGGGCAAATCGCTTAACCTTCAGGTCTAGCTTTCTCACAGAATGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCATTCTGTGAGAAAGCTAGACCTGAAGGTTAAGCGATTTGCCCAAGCTTACAACTCTGTGGCATGTTaGCAGTCTCAGGAATCACCA | + |
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Preference number: 2 (lower is better) Translates to: PHSVRKLDLKVKRFAQAYNSVAC*QSQESP Trigger: TGGTGATTCCTGAGACTGGCAACATGCCACAGAGTT...GTAAGCTTGGGCAAATCGCTTAACCTTCAGGTCTAGCTTTCTCACAGAATGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR CCA 90 bp | GGATACATGGAAAGCTATGTCAGGGCAACCTCAGCAATACCAGAACTCGGCCTTATTATTTCAACTCTGTaGCATGTTGCCAGTCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GYMESYVRATSAIPELGLIISTL*HVASLR Trigger: CCTGAGACTGGCAACATGCCACAGAGTTGAAATAAT...AAGGCCGAGTTCTGGTATTGCTGAGGTTGCCCTGACATAGCTTTCCATGTATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR CAA 90 bp | AAGGAAACGGAACTGCGAGCTTTGTGTTGGTGTCACTGGGGACTTTaGGTCTCGACATCTCTTGAGTTCTTCCATGAGTTTTACTATCAG | + |
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Preference number: 2 (lower is better) Translates to: KETELRALCWCHWGL*VSTSLEFFHEFYYQ Trigger: CTGATAGTAAAACTCATGGAAGAACTCAAGAGATGTCGAGACCAAAAGTCCCCAGTGACACCAACACAAAGCTCGCAGTTCCGTTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTCTATCAACTAAAAGTCTATCCAGGCTTTTCTCTAATGCTCCACGCTGTTTGTGTTGGTGTCACTaGGGACTTTTGGTCTCGACA | + |
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Preference number: 2 (lower is better) Translates to: GSLSTKSLSRLFSNAPRCLCWCH*GLLVST Trigger: TGTCGAGACCAAAAGTCCCCAGTGACACCAACACAA...ACAGCGTGGAGCATTAGAGAAAAGCCTGGATAGACTTTTAGTTGATAGAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCCACCAAGCCAGTCACCCACTTCAAATTTGCAGGTCATTAGTTTCCCCAAAAAAGAACTGTATGTaGCTCATGGTGACACCTACA | + |
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Preference number: 2 (lower is better) Translates to: RSHQASHPLQICRSLVSPKKNCM*LMVTPT Trigger: TGTAGGTGTCACCATGAGTCACATACAGTTCTTTTT...TGGGGAAACTAATGACCTGCAAATTTGAAGTGGGTGACTGGCTTGGTGGCTTCT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR CAA 90 bp | AAAAGGAGCCCGAAAGGGTCACTCTTGAAGAAGGCAAGCTCAGTTTaGCTTGCTTCTTCCTCCCTGATATATACATTCAGCTACTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: KRSPKGSLLKKASSV*LASSSLIYTFSYLK Trigger: CTTTAAGTAGCTGAATGTATATATCAGGGAGGAAGAAGCAAGCAAAACTGAGCTTGCCTTCTTCAAGAGTGACCCTTTCGGGCTCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR CAA 90 bp | AGCTATGTCAGGGCAACCTCAGCAATACCAGAACTCGGCCTTCCGGGAGCTGTCCAACTCTGTGGCATGTaGCCAGTCTCAGGAATCACC | + |
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Preference number: 3 (lower is better) Translates to: SYVRATSAIPELGLPGAVQLCGM*PVSGIT Trigger: GGTGATTCCTGAGACTGGCAACATGCCACAGAGTTG...GACAGCTCCCGGAAGGCCGAGTTCTGGTATTGCTGAGGTTGCCCTGACATAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR TCA 72 bp | CAGGTGACTGAGCGGCTGGGCAAGGCTCCTGAGTTCTaGGTATTATTTCAACTCTGTGGCATGTTGCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: QVTERLGKAPEF*VLFQLCGMLPV Trigger: GACTGGCAACATGCCACAGAGTTGAAATAATACTCAGAACTCAGGAGCCTTGCCCAGCCGCTCAGTCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR GCA 72 bp | GTCTCAGGAATCACCACACCTGTGACAGGGACAGAGTaGTCCATCCTGGGCAAATACAGAGAAGAACTCCGA | + |
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Preference number: 3 (lower is better) Translates to: VSGITTPVTGTE*SILGKYREELR Trigger: TCGGAGTTCTTCTCTGTATTTGCCCAGGATGGAGCACTCTGTCCCTGTCACAGGTGTGGTGATTCCTGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR GCA 72 bp | GGAGGACGGAGAATAGGAACGAGAAGGAAACGGAACTaGGAGCTTTGTGTTGGTGTCACTGGGGACTTTTGG | + |
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Preference number: 3 (lower is better) Translates to: GGRRIGTRRKRN*ELCVGVTGDFW Trigger: CCAAAAGTCCCCAGTGACACCAACACAAAGCTCGCAGTTCCGTTTCCTTCTCGTTCCTATTCTCCGTCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR GCA 72 bp | CCAGCCGCTGACTATGTGCTTCCACAAAGCCCTCTATaGACCAAGGCTTCAGGTTTACAGAAACCTCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: PAADYVLPQSPL*TKASGLQKPLP Trigger: TGGAAGAGGTTTCTGTAAACCTGAAGCCTTGGTGCATAGAGGGCTTTGTGGAAGCACATAGTCAGCGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR CCA 72 bp | AGGAACGAGAAGGAAACGGAACTGCGAGCTTTGTGTTaGTGTCACTGGGGACTTTTGGTCTCGACATCTCTT | + |
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Preference number: 3 (lower is better) Translates to: RNEKETELRALC*CHWGLLVSTSL Trigger: AAGAGATGTCGAGACCAAAAGTCCCCAGTGACACCAACACAAAGCTCGCAGTTCCGTTTCCTTCTCGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR CCA 72 bp | TCTAATCATCTGGGAAGTTCCTTATCCAGCCTTAGATaGCTAGCAGAAGCCACCAAGCCAGTCACCCACTTC | + |
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Preference number: 3 (lower is better) Translates to: SNHLGSSLSSLR*LAEATKPVTHF Trigger: GAAGTGGGTGACTGGCTTGGTGGCTTCTGCTAGCCATCTAAGGCTGGATAAGGAACTTCCCAGATGATTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR TCA 72 bp | TGCTGTAGATGTTCCTGGGTTCAGTGTAGGTGGATTTaGGGTTTCCTTCCTAGTGGCACTTACGGGTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: CCRCSWVQCRWI*GFLPSGTYGFV Trigger: AACAAACCCGTAAGTGCCACTAGGAAGGAAACCTCAAATCCACCTACACTGAACCCAGGAACATCTACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR CAA 90 bp | CCTCATTCTGTGAGAAAGCTAGACCTGAAGGTTAAGCGATTTGCCCAAGCTTACGACACCTACACATTATaGCCTGAGATGACAGATTCA | + |
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Preference number: 3 (lower is better) Translates to: PHSVRKLDLKVKRFAQAYDTYTL*PEMTDS Trigger: TGAATCTGTCATCTCAGGCAATAATGTGTAGGTGTC...GTAAGCTTGGGCAAATCGCTTAACCTTCAGGTCTAGCTTTCTCACAGAATGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR-3UTR CAA 90 bp | GTTAACCACTTTTATCCTGTCTCCTCCAGAGGTGAACTTCATGATCCAGTGGCAAAGTTGGAACATGTGTaGAAGCCACTAGAAAATAAG | + |
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Preference number: 3 (lower is better) Translates to: VNHFYPVSSRGELHDPVAKLEHV*KPLENK Trigger: CTTATTTTCTAGTGGCTTCAACACATGTTCCAACTT...TGCCACTGGATCATGAAGTTCACCTCTGGAGGAGACAGGATAAAAGTGGTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| CDS-3UTR TCA 90 bp | GCTATGTCAGGGCAACCTCAGCAATACCAGAACTCGGCCTTCCGGGAGCTGTCCACTCTCATGTGGATTTaGAGGTGGGAGCTCCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: AMSGQPQQYQNSAFRELSTLMWI*RWELQL Trigger: CAACTGGAGCTCCCACCTTCAAATCCACATGAGAGT...GGACAGCTCCCGGAAGGCCGAGTTCTGGTATTGCTGAGGTTGCCCTGACATAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| CDS-3UTR TCA 90 bp | GCTATGTCAGGGCAACCTCAGCAATACCAGAACTCGGCCTTCCGGGAGCTGTCCGCTGTATGGATTTTCTaGTGCATAAAAAGATCTGCT | + |
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Preference number: 4 (lower is better) Translates to: AMSGQPQQYQNSAFRELSAVWIF*CIKRSA Trigger: AGCAGATCTTTTTATGCATCAGAAAATCCATACAGC...GGACAGCTCCCGGAAGGCCGAGTTCTGGTATTGCTGAGGTTGCCCTGACATAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR CAA 72 bp | GAGAATAGGAACGAGAAGGAAACGGAACTGCGAGCTTaGTGTTGGTGTCACTGGGGACTTTTGGTCTCGACA | + |
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Preference number: 4 (lower is better) Translates to: ENRNEKETELRA*CWCHWGLLVST Trigger: TGTCGAGACCAAAAGTCCCCAGTGACACCAACACAAAGCTCGCAGTTCCGTTTCCTTCTCGTTCCTATTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| CDS-3UTR GCA 90 bp | CTCTATCAACTAAAAGTCTATCCAGGCTTTTCTCTAATGCTCCACGCTGTGGTGGGACTCTTTGATGCATaGAGAGGCTGGAGGTATGCC | + |
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Preference number: 4 (lower is better) Translates to: LYQLKVYPGFSLMLHAVVGLFDA*RGWRYA Trigger: GGCATACCTCCAGCCTCTGCATGCATCAAAGAGTCC...CACCACAGCGTGGAGCATTAGAGAAAAGCCTGGATAGACTTTTAGTTGATAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| CDS-3UTR GCA 90 bp | ATTATTTCAACTCTGTGGCATGTTGCCAGTCTCAGGAATCACCACACCTGTGACGTACTCTCTGATGGATaGAAAGGCTTGTACTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: IISTLWHVASLRNHHTCDVLSDG*KGLYSG Trigger: GCCAGAGTACAAGCCTTTGCATCCATCAGAGAGTAC...GTCACAGGTGTGGTGATTCCTGAGACTGGCAACATGCCACAGAGTTGAAATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR CAA 72 bp | GAACTGCGAGCTTTGTGTTGGTGTCACTGGGGACTTTaGGTCTCGACATCTCTTGAGTTCTTCCATGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: ELRALCWCHWGL*VSTSLEFFHEF Trigger: AAACTCATGGAAGAACTCAAGAGATGTCGAGACCAAAAGTCCCCAGTGACACCAACACAAAGCTCGCAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| CDS-3UTR GCA 90 bp | GTTAACCACTTTTATCCTGTCTCCTCCAGAGGTGAACTTCATGATCCAGTGGCACAGAGAAAAATTCCCTaGACATGGGGCACTTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: VNHFYPVSSRGELHDPVAQRKIP*TWGTCR Trigger: TCTACAAGTGCCCCATGTGCAGGGAATTTTTCTCTG...TGCCACTGGATCATGAAGTTCACCTCTGGAGGAGACAGGATAAAAGTGGTTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| 3UTR CAA 72 bp | CCGAAAGGGTCACTCTTGAAGAAGGCAAGCTCAGTTTaGCTTGCTTCTTCCTCCCTGATATATACATTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PKGSLLKKASSV*LASSSLIYTFS Trigger: GCTGAATGTATATATCAGGGAGGAAGAAGCAAGCAAAACTGAGCTTGCCTTCTTCAAGAGTGACCCTTTCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| CDS-3UTR CCA 90 bp | GTAGGTGGATTTGAGGTTTCCTTCCTAGTGGCACTTACGGGTTTGTTTAAGATTGGCTTTTCCACAGTGTaGATTTTCTTGTGTCTATTA | + |
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Preference number: 4 (lower is better) Translates to: VGGFEVSFLVALTGLFKIGFSTV*IFLCLL Trigger: TAATAGACACAAGAAAATCCACACTGTGGAAAAGCC...AATCTTAAACAAACCCGTAAGTGCCACTAGGAAGGAAACCTCAAATCCACCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| CDS-3UTR CAA 90 bp | GCTATGTCAGGGCAACCTCAGCAATACCAGAACTCGGCCTTCCGGGAGCTGTCCTTGTGTCTATTAAGTTaGGTCGTCGTGCTAAAATCC | + |
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Preference number: 5 (lower is better) Translates to: AMSGQPQQYQNSAFRELSLCLLS*VVVLKS Trigger: GGATTTTAGCACGACGACCAAACTTAATAGACACAA...GGACAGCTCCCGGAAGGCCGAGTTCTGGTATTGCTGAGGTTGCCCTGACATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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| CDS-3UTR CAA 90 bp | GTAGGTGGATTTGAGGTTTCCTTCCTAGTGGCACTTACGGGTTTGTTTAAGATTCAGAGGTTAGAACTATaGCTGAAGCCCCTCCCGCAC | + |
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Preference number: 5 (lower is better) Translates to: VGGFEVSFLVALTGLFKIQRLEL*LKPLPH Trigger: GTGCGGGAGGGGCTTCAGCAATAGTTCTAACCTCTG...AATCTTAAACAAACCCGTAAGTGCCACTAGGAAGGAAACCTCAAATCCACCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111417.9 |
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