Pregenerated sensors for ZFP661 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034800Ensembl transcript IDs: ENSMUST00000077422.12, ENSMUST00000110366.8, ENSMUST00000110368.9, ENSMUST00000164551.2
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGGAGGTGCACCGTTTACTCGGACCCTGGAGCAGAGGTTGGGCTaGAGACAGCGGCCAGAGTTGGCAGAAAGAACAAATGCTGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: EGGAPFTRTLEQRLG*RQRPELAERTNAGL Trigger: AAGGCCAGCATTTGTTCTTTCTGCCAACTCTGGCCGCTGTCTTCAGCCCAACCTCTGCTCCAGGGTCCGAGTAAACGGTGCACCTCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR TCA 90 bp | GAGGTGTGGCTTTGTTGGAAGAGGTGTGTCACTGGGGGTGGGCTTTaGAGTTTCAGAAGCCCTTGCCTAGACCAGTGTGCCAAGACCAGT | + |
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Preference number: 1 (lower is better) Translates to: EVWLCWKRCVTGGGL*SFRSPCLDQCAKTS Trigger: ACTGGTCTTGGCACACTGGTCTAGGCAAGGGCTTCTGAAACTTCAAAGCCCACCCCCAGTGACACACCTCTTCCAACAAAGCCACACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR GCA 90 bp | TGGGGGTGGGCTTTGAAGTTTCAGAAGCCCTTGCCTAGACCAGTGTaGCAAGACCAGTCTGTCTGTCTCTCCCTATCTCTTGGCCTACTG | + |
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Preference number: 1 (lower is better) Translates to: WGWALKFQKPLPRPV*QDQSVCLSLSLGLL Trigger: CAGTAGGCCAAGAGATAGGGAGAGACAGACAGACTGGTCTTGGCACACTGGTCTAGGCAAGGGCTTCTGAAACTTCAAAGCCCACCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR CCA 90 bp | GGATCAGGAGGTGTGGCTTTGTTGGAAGAGGTGTGTCACTGGGGGTaGGCTTTGAAGTTTCAGAAGCCCTTGCCTAGACCAGTGTGCCAA | + |
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Preference number: 1 (lower is better) Translates to: GSGGVALLEEVCHWG*ALKFQKPLPRPVCQ Trigger: TTGGCACACTGGTCTAGGCAAGGGCTTCTGAAACTTCAAAGCCCACCCCCAGTGACACACCTCTTCCAACAAAGCCACACCTCCTGATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR GCA 90 bp | TGTGCCAAGACCAGTCTGTCTGTCTCTCCCTATCTCTTGGCCTACTaGTTGTGGATCAGATTTAAGTTCTGCTCCAGCACTGGGTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: CAKTSLSVSPYLLAY*LWIRFKFCSSTGSA Trigger: GGCAGACCCAGTGCTGGAGCAGAACTTAAATCTGATCCACAAGCAGTAGGCCAAGAGATAGGGAGAGACAGACAGACTGGTCTTGGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR GCA 90 bp | TCCTATGATCTCTCCAGCTTCCTTTCGCAGTGCTTGGGATCAAACTaGAGCTCCTCATGCATGCTAGGCGGGAGTCTATCACTGAGCTAT | + |
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Preference number: 1 (lower is better) Translates to: SYDLSSFLSQCLGSN*SSSCMLGGSLSLSY Trigger: ATAGCTCAGTGATAGACTCCCGCCTAGCATGCATGAGGAGCTGCAGTTTGATCCCAAGCACTGCGAAAGGAAGCTGGAGAGATCATAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR CCA 90 bp | AAGACCAGTCTGTCTGTCTCTCCCTATCTCTTGGCCTACTGCTTGTaGATCAGATTTAAGTTCTGCTCCAGCACTGGGTCTGCCTGTCAC | + |
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Preference number: 1 (lower is better) Translates to: KTSLSVSPYLLAYCL*IRFKFCSSTGSACH Trigger: GTGACAGGCAGACCCAGTGCTGGAGCAGAACTTAAATCTGATCCACAAGCAGTAGGCCAAGAGATAGGGAGAGACAGACAGACTGGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR GCA 90 bp | CTGCAGCTCCTCATGCATGCTAGGCGGGAGTCTATCACTGAGCTATaGGCAGCCTCTGTGCAGAATTTTGAATGTGGAGATTCATGGTTT | + |
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Preference number: 1 (lower is better) Translates to: LQLLMHARRESITEL*AASVQNFECGDSWF Trigger: AAACCATGAATCTCCACATTCAAAATTCTGCACAGAGGCTGCGCATAGCTCAGTGATAGACTCCCGCCTAGCATGCATGAGGAGCTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR CCA 90 bp | TGCCTGTCACCATGCTCCTATGATGATGTTCAGAGACTCACCCCCTaGAACTGTAAGCAAGGCCTGCAAATGCTTTCTAAGTTGCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: CLSPCSYDDVQRLTP*NCKQGLQMLSKLPW Trigger: CCAAGGCAACTTAGAAAGCATTTGCAGGCCTTGCTTACAGTTCCAGGGGGTGAGTCTCTGAACATCATCATAGGAGCATGGTGACAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR GCA 90 bp | ATGATGATGTTCAGAGACTCACCCCCTGGAACTGTAAGCAAGGCCTaGAAATGCTTTCTAAGTTGCCTTGGCCATCATGTCTCTGCACAG | + |
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Preference number: 1 (lower is better) Translates to: MMMFRDSPPGTVSKA*KCFLSCLGHHVSAQ Trigger: CTGTGCAGAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTTGCTTACAGTTCCAGGGGGTGAGTCTCTGAACATCATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR TCA 90 bp | CTATTCTCACTGTGTCTGCAGATTCCTCTCCTAACATCTGTCCTATaGTCTCTCCAGCTTCCTTTCGCAGTGCTTGGGATCAAACTGCAG | + |
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Preference number: 1 (lower is better) Translates to: LFSLCLQIPLLTSVL*SLQLPFAVLGIKLQ Trigger: CTGCAGTTTGATCCCAAGCACTGCGAAAGGAAGCTGGAGAGATCATAGGACAGATGTTAGGAGAGGAATCTGCAGACACAGTGAGAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR CCA 90 bp | AACTTAACCTCCTCTCAGTTTCAATGGAAATCCACCTGGATCTACTaGAATACACAAGCCCATTTCCAGGCCTTACCTTGCAAAAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: NLTSSQFQWKSTWIY*NTQAHFQALPCKKG Trigger: TCCCTTTTTGCAAGGTAAGGCCTGGAAATGGGCTTGTGTATTCCAGTAGATCCAGGTGGATTTCCATTGAAACTGAGAGGAGGTTAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
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| 3UTR TCA 90 bp | ACACAAATGTATTCCCTGACACTCTTCTGCTTCAAGAAGCCAAAATaGATTTGTTTAGTAGCATGGGAGAGGACTGTTCGGCAACTTAAC | + |
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Preference number: 1 (lower is better) Translates to: TQMYSLTLFCFKKPK*ICLVAWERTVRQLN Trigger: GTTAAGTTGCCGAACAGTCCTCTCCCATGCTACTAAACAAATTCATTTTGGCTTCTTGAAGCAGAAGAGTGTCAGGGAATACATTTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCCAGCTTCCTTTCGCAGTGCTTGGGATCAAACTGCAGCTCCTCATGCATCCCTGGAGCAGAGGTTaGGCTGAAGACAGCGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SLQLPFAVLGIKLQLLMHPWSRG*AEDSGQ Trigger: CTGGCCGCTGTCTTCAGCCCAACCTCTGCTCCAGGG...ATGCATGAGGAGCTGCAGTTTGATCCCAAGCACTGCGAAAGGAAGCTGGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTCACCATGCTCCTATGATGATGTTCAGAGACTCACCCCCTGGAACTGTACCCTGGAGCAGAGGTTaGGCTGAAGACAGCGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: ACHHAPMMMFRDSPPGTVPWSRG*AEDSGQ Trigger: CTGGCCGCTGTCTTCAGCCCAACCTCTGCTCCAGGG...TACAGTTCCAGGGGGTGAGTCTCTGAACATCATCATAGGAGCATGGTGACAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR CAA 90 bp | GGAGGTGTGGCTTTGTTGGAAGAGGTGTGTCACTGGGGGTGGGCTTaGAAGTTTCAGAAGCCCTTGCCTAGACCAGTGTGCCAAGACCAG | + |
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Preference number: 2 (lower is better) Translates to: GGVALLEEVCHWGWA*KFQKPLPRPVCQDQ Trigger: CTGGTCTTGGCACACTGGTCTAGGCAAGGGCTTCTGAAACTTCAAAGCCCACCCCCAGTGACACACCTCTTCCAACAAAGCCACACCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR TCA 90 bp | TTGTGGATCAGATTTAAGTTCTGCTCCAGCACTGGGTCTGCCTGTCACCATGCTGAGCAGAGGTTGGGCTaGAGACAGCGGCCAGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: LWIRFKFCSSTGSACHHAEQRLG*RQRPEL Trigger: CAACTCTGGCCGCTGTCTTCAGCCCAACCTCTGCTC...AGCATGGTGACAGGCAGACCCAGTGCTGGAGCAGAACTTAAATCTGATCCACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR TCA 90 bp | GCCTGTCACCATGCTCCTATGATGATGTTCAGAGACTCACCCCCTGGAACTGTAGCGGGAGTCTATCACTaGGCTATGCGCAGCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: ACHHAPMMMFRDSPPGTVAGVYH*AMRSLC Trigger: ACAGAGGCTGCGCATAGCTCAGTGATAGACTCCCGC...TACAGTTCCAGGGGGTGAGTCTCTGAACATCATCATAGGAGCATGGTGACAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR GCA 90 bp | TGTAGCACAGGAAGGAGGTGCACCGTTTACTCGGACCCTGGAGCAGAGGTTGGGGGCAGAAAGAACAAATaGTGGCCTTGTAGACGACAG | + |
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Preference number: 2 (lower is better) Translates to: CSTGRRCTVYSDPGAEVGGRKNK*WPCRRQ Trigger: CTGTCGTCTACAAGGCCAGCATTTGTTCTTTCTGCC...CCCAACCTCTGCTCCAGGGTCCGAGTAAACGGTGCACCTCCTTCCTGTGCTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTTGAAGTTTCAGAAGCCCTTGCCTAGACCAGTGTGCCAAGACCAGTCTGTCGTTCTGCTCCAGCACTaGGTCTGCCTGTCACCATGC | + |
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Preference number: 2 (lower is better) Translates to: ALKFQKPLPRPVCQDQSVVLLQH*VCLSPC Trigger: GCATGGTGACAGGCAGACCCAGTGCTGGAGCAGAAC...GACAGACTGGTCTTGGCACACTGGTCTAGGCAAGGGCTTCTGAAACTTCAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGCCTGCAAATGCTTTCTAAGTTGCCTTGGCCATCATGTCTCTGCACAGCAAGAGCAGAGGTTGGGCTaGAGACAGCGGCCAGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: KACKCFLSCLGHHVSAQQEQRLG*RQRPEL Trigger: CAACTCTGGCCGCTGTCTTCAGCCCAACCTCTGCTC...TTGCTGTGCAGAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGAAGTTTCAGAAGCCCTTGCCTAGACCAGTGTGCCAAGACCAGTCTGTCCTCCAGCACTGGGTCTaGCTGTCACCATGCTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: ALKFQKPLPRPVCQDQSVLQHWV*LSPCSY Trigger: ATAGGAGCATGGTGACAGGCAGACCCAGTGCTGGAG...GACAGACTGGTCTTGGCACACTGGTCTAGGCAAGGGCTTCTGAAACTTCAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR CAA 90 bp | GCCAAGACCAGTCTGTCTGTCTCTCCCTATCTCTTGGCCTACTGCTaGTGGATCAGATTTAAGTTCTGCTCCAGCACTGGGTCTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: AKTSLSVSPYLLAYC*WIRFKFCSSTGSAC Trigger: ACAGGCAGACCCAGTGCTGGAGCAGAACTTAAATCTGATCCACAAGCAGTAGGCCAAGAGATAGGGAGAGACAGACAGACTGGTCTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR TCA 90 bp | GATTCCTCTCCTAACATCTGTCCTATGATCTCTCCAGCTTCCTTTCGCAGTGCTGCGGGAGTCTATCACTaGGCTATGCGCAGCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: DSSPNICPMISPASFRSAAGVYH*AMRSLC Trigger: ACAGAGGCTGCGCATAGCTCAGTGATAGACTCCCGC...AGCACTGCGAAAGGAAGCTGGAGAGATCATAGGACAGATGTTAGGAGAGGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGCCTGCAAATGCTTTCTAAGTTGCCTTGGCCATCATGTCTCTGCACAGCAAGCGGGAGTCTATCACTaGGCTATGCGCAGCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: KACKCFLSCLGHHVSAQQAGVYH*AMRSLC Trigger: ACAGAGGCTGCGCATAGCTCAGTGATAGACTCCCGC...TTGCTGTGCAGAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCTATGCGCAGCCTCTGTGCAGAATTTTGAATGTGGAGATTCATGGTTTAGTGAGCAGAGGTTGGGCTaGAGACAGCGGCCAGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: ELCAASVQNFECGDSWFSEQRLG*RQRPEL Trigger: CAACTCTGGCCGCTGTCTTCAGCCCAACCTCTGCTC...ACTAAACCATGAATCTCCACATTCAAAATTCTGCACAGAGGCTGCGCATAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR GCA 90 bp | TTGTGGATCAGATTTAAGTTCTGCTCCAGCACTGGGTCTGCCTGTCACCATGCTAACTGCAGCTCCTCATaGATGCTAGGCGGGAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: LWIRFKFCSSTGSACHHANCSSS*MLGGSL Trigger: TAGACTCCCGCCTAGCATGCATGAGGAGCTGCAGTT...AGCATGGTGACAGGCAGACCCAGTGCTGGAGCAGAACTTAAATCTGATCCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTCACCATGCTCCTATGATGATGTTCAGAGACTCACCCCCTGGAACTGTAGACAGCGGCCAGAGTTaGCAGAAAGAACAAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: ACHHAPMMMFRDSPPGTVDSGQS*QKEQML Trigger: CAGCATTTGTTCTTTCTGCCAACTCTGGCCGCTGTC...TACAGTTCCAGGGGGTGAGTCTCTGAACATCATCATAGGAGCATGGTGACAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR CAA 90 bp | CTAGACCAGTGTGCCAAGACCAGTCTGTCTGTCTCTCCCTATCTCTaGGCCTACTGCTTGTGGATCAGATTTAAGTTCTGCTCCAGCACT | + |
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Preference number: 2 (lower is better) Translates to: LDQCAKTSLSVSPYL*AYCLWIRFKFCSST Trigger: AGTGCTGGAGCAGAACTTAAATCTGATCCACAAGCAGTAGGCCAAGAGATAGGGAGAGACAGACAGACTGGTCTTGGCACACTGGTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGAAGTTTCAGAAGCCCTTGCCTAGACCAGTGTGCCAAGACCAGTCTGTCCAGGGTGCTCCTCTGTaGAATTCAGACAGTAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: ALKFQKPLPRPVCQDQSVQGAPL*NSDSKR Trigger: CCTTTTACTGTCTGAATTTCACAGAGGAGCACCCTG...GACAGACTGGTCTTGGCACACTGGTCTAGGCAAGGGCTTCTGAAACTTCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGAAGTTTCAGAAGCCCTTGCCTAGACCAGTGTGCCAAGACCAGTCTGTCTATGCGCAGCCTCTGTaGAGAATTTTGAATGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: ALKFQKPLPRPVCQDQSVYAQPL*RILNVE Trigger: CTCCACATTCAAAATTCTGCACAGAGGCTGCGCATA...GACAGACTGGTCTTGGCACACTGGTCTAGGCAAGGGCTTCTGAAACTTCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGCCTGCAAATGCTTTCTAAGTTGCCTTGGCCATCATGTCTCTGCACAGCAAAGCTTCCTTTCGCAGTaGTTGGGATCAAACTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: KACKCFLSCLGHHVSAQQSFLSQ*LGSNCS Trigger: GCTGCAGTTTGATCCCAAGCACTGCGAAAGGAAGCT...TTGCTGTGCAGAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGAAGTTTCAGAAGCCCTTGCCTAGACCAGTGTGCCAAGACCAGTCTGTCAGAATAAGGTCTAGGTaGCAAAAAGCTCCAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: ALKFQKPLPRPVCQDQSVRIRSR*QKAPEE Trigger: CTCTTCTGGAGCTTTTTGGCACCTAGACCTTATTCT...GACAGACTGGTCTTGGCACACTGGTCTAGGCAAGGGCTTCTGAAACTTCAAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR CCA 90 bp | TTTTACTTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCCCTGGAGCAGAGGTTaGGCTGAAGACAGCGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: FYLISLTFSKLICELQQGPWSRG*AEDSGQ Trigger: CTGGCCGCTGTCTTCAGCCCAACCTCTGCTCCAGGG...GCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAAGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGAAGTTTCAGAAGCCCTTGCCTAGACCAGTGTGCCAAGACCAGTCTGTCAAATGCTTTCTAAGTTaGCTTGGCCATCATGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: ALKFQKPLPRPVCQDQSVKCFLS*LGHHVS Trigger: AGAGACATGATGGCCAAGGCAACTTAGAAAGCATTT...GACAGACTGGTCTTGGCACACTGGTCTAGGCAAGGGCTTCTGAAACTTCAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCTGCAAATGCTTTCTAAGTTGCCTTGGCCATCATGTCTCTGCACAGCAAAATAACCAAGACACCTaGCTTCACCTTGCATCTCCT | + |
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Preference number: 2 (lower is better) Translates to: KACKCFLSCLGHHVSAQQNNQDT*LHLASP Trigger: AGGAGATGCAAGGTGAAGCCAGGTGTCTTGGTTATT...TTGCTGTGCAGAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR TCA 90 bp | TTGTGGATCAGATTTAAGTTCTGCTCCAGCACTGGGTCTGCCTGTCACCATGCTCTCTGTGCAGAATTTTaGATGTGGAGATTCATGGTT | + |
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Preference number: 2 (lower is better) Translates to: LWIRFKFCSSTGSACHHALCAEF*MWRFMV Trigger: AACCATGAATCTCCACATTCAAAATTCTGCACAGAG...AGCATGGTGACAGGCAGACCCAGTGCTGGAGCAGAACTTAAATCTGATCCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR TCA 90 bp | GATTCCTCTCCTAACATCTGTCCTATGATCTCTCCAGCTTCCTTTCGCAGTGCTCTCTGTGCAGAATTTTaGATGTGGAGATTCATGGTT | + |
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Preference number: 2 (lower is better) Translates to: DSSPNICPMISPASFRSALCAEF*MWRFMV Trigger: AACCATGAATCTCCACATTCAAAATTCTGCACAGAG...AGCACTGCGAAAGGAAGCTGGAGAGATCATAGGACAGATGTTAGGAGAGGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR GCA 90 bp | GCCTGTCACCATGCTCCTATGATGATGTTCAGAGACTCACCCCCTGGAACTGTATGCAGATATTTAAAGTaGAGTGATAACAGGCCTATT | + |
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Preference number: 2 (lower is better) Translates to: ACHHAPMMMFRDSPPGTVCRYLK*SDNRPI Trigger: AATAGGCCTGTTATCACTGCACTTTAAATATCTGCA...TACAGTTCCAGGGGGTGAGTCTCTGAACATCATCATAGGAGCATGGTGACAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR GCA 90 bp | AACTGTAAGCAAGGCCTGCAAATGCTTTCTAAGTTGCCTTGGCCATCATGTCTCAGAATAAGGTCTAGGTaGCAAAAAGCTCCAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: NCKQGLQMLSKLPWPSCLRIRSR*QKAPEE Trigger: CTCTTCTGGAGCTTTTTGGCACCTAGACCTTATTCT...GAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTTGCTTACAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR GCA 90 bp | TTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTATTTCTCCAGCACTGGGTCTaGCTGTCACCATGCTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: LISLTFSKLICELQQGLFLQHWV*LSPCSY Trigger: ATAGGAGCATGGTGACAGGCAGACCCAGTGCTGGAG...AAATAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCAGATTCATACTGAAGACCTCATTTCTCCTTGTGTCATGTAGGGTATTTTTGCCTAGACCAGTGTaGCAAGACCAGTCTGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: EGRFILKTSFLLVSCRVFLPRPV*QDQSVC Trigger: ACAGACAGACTGGTCTTGGCACACTGGTCTAGGCAA...AAATACCCTACATGACACAAGGAGAAATGAGGTCTTCAGTATGAATCTGCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR CCA 90 bp | TACTTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTAGTGTGTCACTGGGGGTaGGCTTTGAAGTTTCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: YLISLTFSKLICELQQGLVCHWG*ALKFQK Trigger: CTTCTGAAACTTCAAAGCCCACCCCCAGTGACACAC...TAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTTACTTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCAGCTTCCTTTCGCAGTaGTTGGGATCAAACTGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: FYLISLTFSKLICELQQGSFLSQ*LGSNCS Trigger: GCTGCAGTTTGATCCCAAGCACTGCGAAAGGAAGCT...GCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAAGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR CCA 90 bp | TTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTATTTGTGTGTCACTGGGGGTaGGCTTTGAAGTTTCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LISLTFSKLICELQQGLFVCHWG*ALKFQK Trigger: CTTCTGAAACTTCAAAGCCCACCCCCAGTGACACAC...AAATAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR CCA 90 bp | AAATACAGGGATTCTCCAAGGAAACAGATGCATTTGGGTACTCAGGATCTAAAGCTGAGAGAAAGAAGGTaGACCCAAGCAGGTTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: KYRDSPRKQMHLGTQDLKLRERR*TQAGFE Trigger: TTCAAAACCTGCTTGGGTCCACCTTCTTTCTCTCAG...CTTTAGATCCTGAGTACCCAAATGCATCTGTTTCCTTGGAGAATCCCTGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| 3UTR-3UTR TCA 90 bp | AAATACAGGGATTCTCCAAGGAAACAGATGCATTTGGGTACTCAGGATCTAAAGAGGCCTATTTCAGTGTaGGGATTGGTTGTTGATCAT | + |
|
Preference number: 2 (lower is better) Translates to: KYRDSPRKQMHLGTQDLKRPISV*GLVVDH Trigger: ATGATCAACAACCAATCCTCACACTGAAATAGGCCT...CTTTAGATCCTGAGTACCCAAATGCATCTGTTTCCTTGGAGAATCCCTGTATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGCAAAAAGGGAAGACTCCCAAAGTCAAGGTTGTCTCATACCTGACCTTTAATCCAAACAGTACAGATTaGATGGACACTCATACACAC | + |
|
Preference number: 2 (lower is better) Translates to: LQKGKTPKVKVVSYLTFNPNSTD*MDTHTH Trigger: GTGTGTATGAGTGTCCATTCAATCTGTACTGTTTGG...ATTAAAGGTCAGGTATGAGACAACCTTGACTTTGGGAGTCTTCCCTTTTTGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTATTGATCACCTAATATTTGCAAGGCACGCTGTAAGACACAGAGACCTATTAGGCAGAAAGAACAAATaGTGGCCTTGTAGACGACAG | + |
|
Preference number: 2 (lower is better) Translates to: FIDHLIFARHAVRHRDLLGRKNK*WPCRRQ Trigger: CTGTCGTCTACAAGGCCAGCATTTGTTCTTTCTGCC...TAATAGGTCTCTGTGTCTTACAGCGTGCCTTGCAAATATTAGGTGATCAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR GCA 90 bp | AACTGTAAGCAAGGCCTGCAAATGCTTTCTAAGTTGCCTTGGCCATCATGTCTCTGCAGATATTTAAAGTaGAGTGATAACAGGCCTATT | + |
|
Preference number: 2 (lower is better) Translates to: NCKQGLQMLSKLPWPSCLCRYLK*SDNRPI Trigger: AATAGGCCTGTTATCACTGCACTTTAAATATCTGCA...GAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTTGCTTACAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTTACTTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTAACATCTGTCCTATaGTCTCTCCAGCTTCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: FYLISLTFSKLICELQQGLTSVL*SLQLPF Trigger: GAAAGGAAGCTGGAGAGATCATAGGACAGATGTTAG...GCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAAGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR TCA 90 bp | TTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTATTTCTAACATCTGTCCTATaGTCTCTCCAGCTTCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LISLTFSKLICELQQGLFLTSVL*SLQLPF Trigger: GAAAGGAAGCTGGAGAGATCATAGGACAGATGTTAG...AAATAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTTCAAGAAGCCAAAATGAATTTGTTTAGTAGCATGGGAGAGGACTGTTCGTTTACAATTCACTGCTaGGACTTTACCCTAAGATCA | + |
|
Preference number: 2 (lower is better) Translates to: LLQEAKMNLFSSMGEDCSFTIHC*DFTLRS Trigger: TGATCTTAGGGTAAAGTCTCAGCAGTGAATTGTAAA...CGAACAGTCCTCTCCCATGCTACTAAACAAATTCATTTTGGCTTCTTGAAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTATTGATCACCTAATATTTGCAAGGCACGCTGTAAGACACAGAGACCTATTATATGCGCAGCCTCTGTaGAGAATTTTGAATGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FIDHLIFARHAVRHRDLLYAQPL*RILNVE Trigger: CTCCACATTCAAAATTCTGCACAGAGGCTGCGCATA...TAATAGGTCTCTGTGTCTTACAGCGTGCCTTGCAAATATTAGGTGATCAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR GCA 90 bp | TACTTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTAACTGTAAGCAAGGCCTaGAAATGCTTTCTAAGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: YLISLTFSKLICELQQGLTVSKA*KCFLSC Trigger: GCAACTTAGAAAGCATTTGCAGGCCTTGCTTACAGT...TAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGCAGATTCATACTGAAGACCTCATTTCTCCTTGTGTCATGTAGGGTATTTTTTACAATTCACTGCTaGGACTTTACCCTAAGATCA | + |
|
Preference number: 2 (lower is better) Translates to: EGRFILKTSFLLVSCRVFFTIHC*DFTLRS Trigger: TGATCTTAGGGTAAAGTCTCAGCAGTGAATTGTAAA...AAATACCCTACATGACACAAGGAGAAATGAGGTCTTCAGTATGAATCTGCCTTC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR GCA 90 bp | GAAGGCAGATTCATACTGAAGACCTCATTTCTCCTTGTGTCATGTAGGGTATTTCCAACTGTAATAGCCTaGAGATATTTAAAGTGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: EGRFILKTSFLLVSCRVFPTVIA*RYLKCS Trigger: ACTGCACTTTAAATATCTGCAGGCTATTACAGTTGG...AAATACCCTACATGACACAAGGAGAAATGAGGTCTTCAGTATGAATCTGCCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTTACTTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCTTTCAGTGTGAGGATTaGTTGTTGATCATGTCCGTG | + |
|
Preference number: 2 (lower is better) Translates to: FYLISLTFSKLICELQQGFQCED*LLIMSV Trigger: CACGGACATGATCAACAACCAATCCTCACACTGAAA...GCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAAGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR GCA 90 bp | TACTTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTACCAACTGTAATAGCCTaGAGATATTTAAAGTGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: YLISLTFSKLICELQQGLPTVIA*RYLKCS Trigger: ACTGCACTTTAAATATCTGCAGGCTATTACAGTTGG...TAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR GCA 90 bp | TTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTATTTAAATGCTTTCTAAGTTaGCTTGGCCATCATGTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LISLTFSKLICELQQGLFKCFLS*LGHHVS Trigger: AGAGACATGATGGCCAAGGCAACTTAGAAAGCATTT...AAATAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR CCA 72 bp | GAGGTGCACCGTTTACTCGGACCCTGGAGCAGAGGTTaGGCTGAAGACAGCGGCCAGAGTTGGCAGAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: EVHRLLGPWSRG*AEDSGQSWQKE Trigger: TTCTTTCTGCCAACTCTGGCCGCTGTCTTCAGCCCAACCTCTGCTCCAGGGTCCGAGTAAACGGTGCACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR TCA 72 bp | GCACCGTTTACTCGGACCCTGGAGCAGAGGTTGGGCTaGAGACAGCGGCCAGAGTTGGCAGAAAGAACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: APFTRTLEQRLG*RQRPELAERTN Trigger: ATTTGTTCTTTCTGCCAACTCTGGCCGCTGTCTTCAGCCCAACCTCTGCTCCAGGGTCCGAGTAAACGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR CCA 72 bp | AAGACAGCGGCCAGAGTTGGCAGAAAGAACAAATGCTaGCCTTGTAGACGACAGGGAACCCTTCCAGGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: KTAARVGRKNKC*PCRRQGTLPGS Trigger: CGAGCCTGGAAGGGTTCCCTGTCGTCTACAAGGCCAGCATTTGTTCTTTCTGCCAACTCTGGCCGCTGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR TCA 72 bp | CTTTGTTGGAAGAGGTGTGTCACTGGGGGTGGGCTTTaGAGTTTCAGAAGCCCTTGCCTAGACCAGTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LCWKRCVTGGGL*SFRSPCLDQCA Trigger: GGCACACTGGTCTAGGCAAGGGCTTCTGAAACTTCAAAGCCCACCCCCAGTGACACACCTCTTCCAACAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR GCA 72 bp | CTCTCCAGCTTCCTTTCGCAGTGCTTGGGATCAAACTaGAGCTCCTCATGCATGCTAGGCGGGAGTCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: LSSFLSQCLGSN*SSSCMLGGSLS Trigger: TGATAGACTCCCGCCTAGCATGCATGAGGAGCTGCAGTTTGATCCCAAGCACTGCGAAAGGAAGCTGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR CCA 72 bp | TCAGGAGGTGTGGCTTTGTTGGAAGAGGTGTGTCACTaGGGGTGGGCTTTGAAGTTTCAGAAGCCCTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SGGVALLEEVCH*GWALKFQKPLP Trigger: AGGCAAGGGCTTCTGAAACTTCAAAGCCCACCCCCAGTGACACACCTCTTCCAACAAAGCCACACCTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR GCA 72 bp | GACTCACCCCCTGGAACTGTAAGCAAGGCCTGCAAATaGTTTCTAAGTTGCCTTGGCCATCATGTCTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: DSPPGTVSKACK*FLSCLGHHVSA Trigger: TGCAGAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTTGCTTACAGTTCCAGGGGGTGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR TCA 72 bp | CTGTGTCTGCAGATTCCTCTCCTAACATCTGTCCTATaGTCTCTCCAGCTTCCTTTCGCAGTGCTTGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: LCLQIPLLTSVL*SLQLPFAVLGI Trigger: GATCCCAAGCACTGCGAAAGGAAGCTGGAGAGATCATAGGACAGATGTTAGGAGAGGAATCTGCAGACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR GCA 72 bp | CATCTGTCCTATGATCTCTCCAGCTTCCTTTCGCAGTaGTTGGGATCAAACTGCAGCTCCTCATGCATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: HLSYDLSSFLSQ*LGSNCSSSCML Trigger: TAGCATGCATGAGGAGCTGCAGTTTGATCCCAAGCACTGCGAAAGGAAGCTGGAGAGATCATAGGACAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR GCA 72 bp | TTCAGAGACTCACCCCCTGGAACTGTAAGCAAGGCCTaGAAATGCTTTCTAAGTTGCCTTGGCCATCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: FRDSPPGTVSKA*KCFLSCLGHHV Trigger: GACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTTGCTTACAGTTCCAGGGGGTGAGTCTCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR CCA 72 bp | CTGTCTGTCTCTCCCTATCTCTTGGCCTACTGCTTGTaGATCAGATTTAAGTTCTGCTCCAGCACTGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSVSPYLLAYCL*IRFKFCSSTGS Trigger: AGACCCAGTGCTGGAGCAGAACTTAAATCTGATCCACAAGCAGTAGGCCAAGAGATAGGGAGAGACAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR CCA 72 bp | CTGATTGATGGAATGTTTAGAAAGGATCAGGAGGTGTaGCTTTGTTGGAAGAGGTGTGTCACTGGGGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LIDGMFRKDQEV*LCWKRCVTGGG Trigger: CCCACCCCCAGTGACACACCTCTTCCAACAAAGCCACACCTCCTGATCCTTTCTAAACATTCCATCAATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR CCA 72 bp | CCATGCTCCTATGATGATGTTCAGAGACTCACCCCCTaGAACTGTAAGCAAGGCCTGCAAATGCTTTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: PCSYDDVQRLTP*NCKQGLQMLSK Trigger: CTTAGAAAGCATTTGCAGGCCTTGCTTACAGTTCCAGGGGGTGAGTCTCTGAACATCATCATAGGAGCATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGCAAAAAGGGAAGACTCCCAAAGTCAAGGTTGTCTCATACCTGACCTTTAATGGAGGTGTGGCTTTGTaGGAAGAGGTGTGTCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: LQKGKTPKVKVVSYLTFNGGVAL*EEVCHW Trigger: CCAGTGACACACCTCTTCCAACAAAGCCACACCTCC...ATTAAAGGTCAGGTATGAGACAACCTTGACTTTGGGAGTCTTCCCTTTTTGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| 3UTR GCA 72 bp | GGCGGGAGTCTATCACTGAGCTATGCGCAGCCTCTGTaGAGAATTTTGAATGTGGAGATTCATGGTTTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GGSLSLSYAQPL*RILNVEIHGLV Trigger: AACTAAACCATGAATCTCCACATTCAAAATTCTGCACAGAGGCTGCGCATAGCTCAGTGATAGACTCCCGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR CCA 72 bp | TCCTCTCAGTTTCAATGGAAATCCACCTGGATCTACTaGAATACACAAGCCCATTTCCAGGCCTTACCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SSQFQWKSTWIY*NTQAHFQALPC Trigger: GCAAGGTAAGGCCTGGAAATGGGCTTGTGTATTCCAGTAGATCCAGGTGGATTTCCATTGAAACTGAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| 3UTR CCA 72 bp | GGACTGTTCGGCAACTTAACCTCCTCTCAGTTTCAATaGAAATCCACCTGGATCTACTGGAATACACAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GLFGNLTSSQFQ*KSTWIYWNTQA Trigger: GGCTTGTGTATTCCAGTAGATCCAGGTGGATTTCCATTGAAACTGAGAGGAGGTTAAGTTGCCGAACAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| 3UTR TCA 72 bp | ATTCATGGTGATGTGCTGGGCCCAAACAGTACAGATTaGATGGACACTCATACACACCAGATGAGAGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: IHGDVLGPNSTD*MDTHTHQMRVT Trigger: TGTCACTCTCATCTGGTGTGTATGAGTGTCCATTCAATCTGTACTGTTTGGGCCCAGCACATCACCATGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| 3UTR GCA 72 bp | TACTGGAATACACAAGCCCATTTCCAGGCCTTACCTTaGAAAAAGGGAAGACTCCCAAAGTCAAGGTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: YWNTQAHFQALP*KKGRLPKSRLS Trigger: AGACAACCTTGACTTTGGGAGTCTTCCCTTTTTGCAAGGTAAGGCCTGGAAATGGGCTTGTGTATTCCAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| 3UTR CCA 72 bp | TGTGAACTTCAACAAGGCCTATTTCAGTGTGAGGATTaGTTGTTGATCATGTCCGTGAGCAGAATGTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CELQQGLFQCED*LLIMSVSRMWW Trigger: CCACCACATTCTGCTCACGGACATGATCAACAACCAATCCTCACACTGAAATAGGCCTTGTTGAAGTTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTATTTTCAGGAGGTGTGGCTTaGTTGGAAGAGGTGTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LISLTFSKLICELQQGLFSGGVA*LEEVCH Trigger: GTGACACACCTCTTCCAACAAAGCCACACCTCCTGA...AAATAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR TCA 72 bp | GTTGTTGATCATGTCCGTGAGCAGAATGTGGTGGTTTaGATGAGAATTGCCCCCTTAGGCTCATATACTTAT | + |
|
Preference number: 3 (lower is better) Translates to: VVDHVREQNVVV*MRIAPLGSYTY Trigger: ATAAGTATATGAGCCTAAGGGGGCAATTCTCATTCAAACCACCACATTCTGCTCACGGACATGATCAACAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR TCA 72 bp | GTACTTAATTTCTCTAAACTTCAGGGTGCTCCTCTGTaGAATTCAGACAGTAAAAGGACCCGTTTCAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VLNFSKLQGAPL*NSDSKRTRFRD Trigger: ATCTCTGAAACGGGTCCTTTTACTGTCTGAATTTCACAGAGGAGCACCCTGAAGTTTAGAGAAATTAAGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR TCA 72 bp | ACACACACACACACACACACACACAAATGTATTCCCTaGCACTCTTCTGCTTCAAGAAGCCAAAATGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTHKCIP*HSSASRSQNEF Trigger: AAATTCATTTTGGCTTCTTGAAGCAGAAGAGTGTCAGGGAATACATTTGTGTGTGTGTGTGTGTGTGTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| 3UTR TCA 72 bp | ACAGATGCATTTGGGTACTCAGGATCTAAAGCTTGGTaGTGGGGAACTGCATTGATGAAGATTTTAAATATC | + |
|
Preference number: 3 (lower is better) Translates to: TDAFGYSGSKAW*WGTALMKILNI Trigger: GATATTTAAAATCTTCATCAATGCAGTTCCCCATCACCAAGCTTTAGATCCTGAGTACCCAAATGCATCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| CDS-3UTR TCA 90 bp | TACTCGGACCCTGGAGCAGAGGTTGGGCTGAAGACAGCGGCCAGAGTTGGCAGAGCCGGCACCTCTGGCTaGAGGCCTTTCCACACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YSDPGAEVGLKTAARVGRAGTSG*RPFHTR Trigger: GCGAGTGTGGAAAGGCCTTCAGCCAGAGGTGCCGGC...TCTGCCAACTCTGGCCGCTGTCTTCAGCCCAACCTCTGCTCCAGGGTCCGAGTA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | GCTTTGAAGTTTCAGAAGCCCTTGCCTAGACCAGTGTGCCAAGACCAGTCTGTCGCCGGCACCTCTGGCTaGAGGCCTTTCCACACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ALKFQKPLPRPVCQDQSVAGTSG*RPFHTR Trigger: GCGAGTGTGGAAAGGCCTTCAGCCAGAGGTGCCGGC...GACAGACTGGTCTTGGCACACTGGTCTAGGCAAGGGCTTCTGAAACTTCAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | GCCTGTCACCATGCTCCTATGATGATGTTCAGAGACTCACCCCCTGGAACTGTAGCCGGCACCTCTGGCTaGAGGCCTTTCCACACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ACHHAPMMMFRDSPPGTVAGTSG*RPFHTR Trigger: GCGAGTGTGGAAAGGCCTTCAGCCAGAGGTGCCGGC...TACAGTTCCAGGGGGTGAGTCTCTGAACATCATCATAGGAGCATGGTGACAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | TACTCGGACCCTGGAGCAGAGGTTGGGCTGAAGACAGCGGCCAGAGTTGGCAGAATTCGTAAGGCTTCCTaGCAGTGTGGGTCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YSDPGAEVGLKTAARVGRIRKAS*QCGSAG Trigger: ACCTGCTGACCCACACTGGCAGGAAGCCTTACGAAT...TCTGCCAACTCTGGCCGCTGTCTTCAGCCCAACCTCTGCTCCAGGGTCCGAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | TGTAGCACAGGAAGGAGGTGCACCGTTTACTCGGACCCTGGAGCAGAGGTTGGGGGTGACGCCATAGAATaGTTTCCCACAGTCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSTGRRCTVYSDPGAEVGGDAIE*FPTVPA Trigger: TGCAGGGACTGTGGGAAAGCATTCTATGGCGTCACC...CCCAACCTCTGCTCCAGGGTCCGAGTAAACGGTGCACCTCCTTCCTGTGCTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCAGCTTCCTTTCGCAGTGCTTGGGATCAAACTGCAGCTCCTCATGCATGGCTTCCTGCCAGTGTaGGTCAGCAGGTGCCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLQLPFAVLGIKLQLLMHGFLPV*VSRCRV Trigger: CACTCGGCACCTGCTGACCCACACTGGCAGGAAGCC...ATGCATGAGGAGCTGCAGTTTGATCCCAAGCACTGCGAAAGGAAGCTGGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCCTATGATCTCTCCAGCTTCCTTTCGCAGTGCTTGGGATCAAACTGCAGCGGCTTCCTGCCAGTGTaGGTCAGCAGGTGCCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSYDLSSFLSQCLGSNCSGFLPV*VSRCRV Trigger: CACTCGGCACCTGCTGACCCACACTGGCAGGAAGCC...GCTGCAGTTTGATCCCAAGCACTGCGAAAGGAAGCTGGAGAGATCATAGGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | TACTCGGACCCTGGAGCAGAGGTTGGGCTGAAGACAGCGGCCAGAGTTGGCAGACCAGTGTGTATCTTCTaGTGCTGCGTAAGAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YSDPGAEVGLKTAARVGRPVCIF*CCVREE Trigger: CTCTTCTCTTACGCAGCACCAGAAGATACACACTGG...TCTGCCAACTCTGGCCGCTGTCTTCAGCCCAACCTCTGCTCCAGGGTCCGAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | TACTCGGACCCTGGAGCAGAGGTTGGGCTGAAGACAGCGGCCAGAGTTGGCAGAGATGGAGCTGACATTTaGTGCAAGCCTTTATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YSDPGAEVGLKTAARVGRDGADI*CKPLSK Trigger: CTTGGATAAAGGCTTGCATCAAATGTCAGCTCCATC...TCTGCCAACTCTGGCCGCTGTCTTCAGCCCAACCTCTGCTCCAGGGTCCGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | TGTAGCACAGGAAGGAGGTGCACCGTTTACTCGGACCCTGGAGCAGAGGTTGGGAGGAAAGGGGCTTTTTaGAAGTCCTTGCTTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSTGRRCTVYSDPGAEVGRKGAF*KSLLWD Trigger: GTCCCAAAGCAAGGACTTGCAAAAAGCCCCTTTCCT...CCCAACCTCTGCTCCAGGGTCCGAGTAAACGGTGCACCTCCTTCCTGTGCTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | TGTAGCACAGGAAGGAGGTGCACCGTTTACTCGGACCCTGGAGCAGAGGTTGGGTGTATCTTCTGGTGCTaGGTAAGAGAAGAGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSTGRRCTVYSDPGAEVGCIFWC*VREERS Trigger: TGACCGCTCTTCTCTTACGCAGCACCAGAAGATACA...CCCAACCTCTGCTCCAGGGTCCGAGTAAACGGTGCACCTCCTTCCTGTGCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | TACTCGGACCCTGGAGCAGAGGTTGGGCTGAAGACAGCGGCCAGAGTTGGCAGATTTCTTGGATGGAGCTaGCATTTGATGCAAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YSDPGAEVGLKTAARVGRFLGWS*HLMQAF Trigger: AAAGGCTTGCATCAAATGTCAGCTCCATCCAAGAAA...TCTGCCAACTCTGGCCGCTGTCTTCAGCCCAACCTCTGCTCCAGGGTCCGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR CAA 72 bp | CTGTCCTATGATCTCTCCAGCTTCCTTTCGCAGTGCTaGGGATCAAACTGCAGCTCCTCATGCATGCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSYDLSSFLSQC*GSNCSSSCMLG Trigger: GCCTAGCATGCATGAGGAGCTGCAGTTTGATCCCAAGCACTGCGAAAGGAAGCTGGAGAGATCATAGGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | TGTAGCACAGGAAGGAGGTGCACCGTTTACTCGGACCCTGGAGCAGAGGTTGGGTTTCTTGGATGGAGCTaGCATTTGATGCAAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSTGRRCTVYSDPGAEVGFLGWS*HLMQAF Trigger: AAAGGCTTGCATCAAATGTCAGCTCCATCCAAGAAA...CCCAACCTCTGCTCCAGGGTCCGAGTAAACGGTGCACCTCCTTCCTGTGCTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | GCTAGGCGGGAGTCTATCACTGAGCTATGCGCAGCCTCTGTGCAGAATTTTGAAATTCGTAAGGCTTCCTaGCAGTGTGGGTCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARRESITELCAASVQNFEIRKAS*QCGSAG Trigger: ACCTGCTGACCCACACTGGCAGGAAGCCTTACGAAT...TTCAAAATTCTGCACAGAGGCTGCGCATAGCTCAGTGATAGACTCCCGCCTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | CTGTCCTATGATCTCTCCAGCTTCCTTTCGCAGTGCTTGGGATCAAACTGCAGCGGTGACGCCATAGAATaGTTTCCCACAGTCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSYDLSSFLSQCLGSNCSGDAIE*FPTVPA Trigger: TGCAGGGACTGTGGGAAAGCATTCTATGGCGTCACC...GCTGCAGTTTGATCCCAAGCACTGCGAAAGGAAGCTGGAGAGATCATAGGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | GCCTGTCACCATGCTCCTATGATGATGTTCAGAGACTCACCCCCTGGAACTGTAGGTGACGCCATAGAATaGTTTCCCACAGTCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ACHHAPMMMFRDSPPGTVGDAIE*FPTVPA Trigger: TGCAGGGACTGTGGGAAAGCATTCTATGGCGTCACC...TACAGTTCCAGGGGGTGAGTCTCTGAACATCATCATAGGAGCATGGTGACAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | TTGTGGATCAGATTTAAGTTCTGCTCCAGCACTGGGTCTGCCTGTCACCATGCTAATGTCACCAATGCCTaGCATCTGGTAGGCGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LWIRFKFCSSTGSACHHANVTNA*HLVGGD Trigger: GTCTCCGCCTACCAGATGTCAGGCATTGGTGACATT...AGCATGGTGACAGGCAGACCCAGTGCTGGAGCAGAACTTAAATCTGATCCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | TGTAGCACAGGAAGGAGGTGCACCGTTTACTCGGACCCTGGAGCAGAGGTTGGGGGGCATAGAGAACTTTaGTTTCTATGGATTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSTGRRCTVYSDPGAEVGGHREL*FLWISL Trigger: GAGAGAAATCCATAGAAAGCAAAGTTCTCTATGCCC...CCCAACCTCTGCTCCAGGGTCCGAGTAAACGGTGCACCTCCTTCCTGTGCTACA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | GCTAGGCGGGAGTCTATCACTGAGCTATGCGCAGCCTCTGTGCAGAATTTTGAAGGTCAAAGAAGGCCTTaGCACATGCATCACACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ARRESITELCAASVQNFEGQRRP*HMHHTR Trigger: ACGAGTGTGATGCATGTGGCAAGGCCTTCTTTGACC...TTCAAAATTCTGCACAGAGGCTGCGCATAGCTCAGTGATAGACTCCCGCCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | GCTTTGAAGTTTCAGAAGCCCTTGCCTAGACCAGTGTGCCAAGACCAGTCTGTCCGGATGAGGGACGAATaGTCAAAGAAGGTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALKFQKPLPRPVCQDQSVRMRDE*SKKVFP Trigger: TGGGAAGACCTTCTTTGACCATTCGTCCCTCATCCG...GACAGACTGGTCTTGGCACACTGGTCTAGGCAAGGGCTTCTGAAACTTCAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | GCCTGTCACCATGCTCCTATGATGATGTTCAGAGACTCACCCCCTGGAACTGTATTCAAATGTCACCAATaGCTGACATCTGGTAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ACHHAPMMMFRDSPPGTVFKCHQ*LTSGRR Trigger: CCGCCTACCAGATGTCAGGCATTGGTGACATTTGAA...TACAGTTCCAGGGGGTGAGTCTCTGAACATCATCATAGGAGCATGGTGACAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | GCTAGGCGGGAGTCTATCACTGAGCTATGCGCAGCCTCTGTGCAGAATTTTGAAGGATTTCTCTCAGTGTaGCTCTTGAAGCATCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARRESITELCAASVQNFEGFLSV*LLKHLG Trigger: CCCTAGATGCTTCAAGAGGCACACTGAGAGAAATCC...TTCAAAATTCTGCACAGAGGCTGCGCATAGCTCAGTGATAGACTCCCGCCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | GCCTGTCACCATGCTCCTATGATGATGTTCAGAGACTCACCCCCTGGAACTGTAAGGAAAGGGGCTTTTTaGAAGTCCTTGCTTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ACHHAPMMMFRDSPPGTVRKGAF*KSLLWD Trigger: GTCCCAAAGCAAGGACTTGCAAAAAGCCCCTTTCCT...TACAGTTCCAGGGGGTGAGTCTCTGAACATCATCATAGGAGCATGGTGACAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | GCTAGGCGGGAGTCTATCACTGAGCTATGCGCAGCCTCTGTGCAGAATTTTGAAAGGAAAGGGGCTTTTTaGAAGTCCTTGCTTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ARRESITELCAASVQNFERKGAF*KSLLWD Trigger: GTCCCAAAGCAAGGACTTGCAAAAAGCCCCTTTCCT...TTCAAAATTCTGCACAGAGGCTGCGCATAGCTCAGTGATAGACTCCCGCCTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | CTGTCCTATGATCTCTCCAGCTTCCTTTCGCAGTGCTTGGGATCAAACTGCAGCTGTATCTTCTGGTGCTaGGTAAGAGAAGAGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSYDLSSFLSQCLGSNCSCIFWC*VREERS Trigger: TGACCGCTCTTCTCTTACGCAGCACCAGAAGATACA...GCTGCAGTTTGATCCCAAGCACTGCGAAAGGAAGCTGGAGAGATCATAGGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGTCACCATGCTCCTATGATGATGTTCAGAGACTCACCCCCTGGAACTGTACCAGTGTGTATCTTCTaGTGCTGCGTAAGAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ACHHAPMMMFRDSPPGTVPVCIF*CCVREE Trigger: CTCTTCTCTTACGCAGCACCAGAAGATACACACTGG...TACAGTTCCAGGGGGTGAGTCTCTGAACATCATCATAGGAGCATGGTGACAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR CAA 72 bp | AGTCTGTCTGTCTCTCCCTATCTCTTGGCCTACTGCTaGTGGATCAGATTTAAGTTCTGCTCCAGCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSVSPYLLAYC*WIRFKFCSSTG Trigger: CCCAGTGCTGGAGCAGAACTTAAATCTGATCCACAAGCAGTAGGCCAAGAGATAGGGAGAGACAGACAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | AAGGCCTGCAAATGCTTTCTAAGTTGCCTTGGCCATCATGTCTCTGCACAGCAATCCACTCGTCATCTGTaGAAGTCACCGCCACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KACKCFLSCLGHHVSAQQSTRHL*KSPPHL Trigger: AAGATGTGGCGGTGACTTTCACAGATGACGAGTGGA...TTGCTGTGCAGAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | GATTCCTCTCCTAACATCTGTCCTATGATCTCTCCAGCTTCCTTTCGCAGTGCTGCTCGCCCCTTCTCTTaGACTGAAGAATCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSSPNICPMISPASFRSAARPFS*TEESHQ Trigger: CTGATGTGATTCTTCAGTTCAAGAGAAGGGGCGAGC...AGCACTGCGAAAGGAAGCTGGAGAGATCATAGGACAGATGTTAGGAGAGGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | GCTAGGCGGGAGTCTATCACTGAGCTATGCGCAGCCTCTGTGCAGAATTTTGAAGATGGAGCTGACATTTaGTGCAAGCCTTTATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARRESITELCAASVQNFEDGADI*CKPLSK Trigger: CTTGGATAAAGGCTTGCATCAAATGTCAGCTCCATC...TTCAAAATTCTGCACAGAGGCTGCGCATAGCTCAGTGATAGACTCCCGCCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | AACTGTAAGCAAGGCCTGCAAATGCTTTCTAAGTTGCCTTGGCCATCATGTCTCTCCTCTGGTGTCGGATaGGGGACGAATGGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NCKQGLQMLSKLPWPSCLSSGVG*GTNGQR Trigger: TCTTTGACCATTCGTCCCTCATCCGACACCAGAGGA...GAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTTGCTTACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | GATTCCTCTCCTAACATCTGTCCTATGATCTCTCCAGCTTCCTTTCGCAGTGCTGGTCAAAGAAGGCCTTaGCACATGCATCACACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DSSPNICPMISPASFRSAGQRRP*HMHHTR Trigger: ACGAGTGTGATGCATGTGGCAAGGCCTTCTTTGACC...AGCACTGCGAAAGGAAGCTGGAGAGATCATAGGACAGATGTTAGGAGAGGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | AACTGTAAGCAAGGCCTGCAAATGCTTTCTAAGTTGCCTTGGCCATCATGTCTCATTCGTAAGGCTTCCTaGCAGTGTGGGTCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NCKQGLQMLSKLPWPSCLIRKAS*QCGSAG Trigger: ACCTGCTGACCCACACTGGCAGGAAGCCTTACGAAT...GAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTTGCTTACAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | TTGTGGATCAGATTTAAGTTCTGCTCCAGCACTGGGTCTGCCTGTCACCATGCTTGTATCTTCTGGTGCTaGGTAAGAGAAGAGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWIRFKFCSSTGSACHHACIFWC*VREERS Trigger: TGACCGCTCTTCTCTTACGCAGCACCAGAAGATACA...AGCATGGTGACAGGCAGACCCAGTGCTGGAGCAGAACTTAAATCTGATCCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | ATGCTAGGCGGGAGTCTATCACTGAGCTATGCGCAGCCTCTGTGCAGAATTTTGCTACATTCCTGGTCTTaGTGTTTAGTGAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MLGGSLSLSYAQPLCRILLHSWS*CLVRAF Trigger: GAAAGCCCTCACTAAACACCAAGACCAGGAATGTAG...CAAAATTCTGCACAGAGGCTGCGCATAGCTCAGTGATAGACTCCCGCCTAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCCTATGATCTCTCCAGCTTCCTTTCGCAGTGCTTGGGATCAAACTGCAGCCTACATTCCTGGTCTTaGTGTTTAGTGAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSYDLSSFLSQCLGSNCSLHSWS*CLVRAF Trigger: GAAAGCCCTCACTAAACACCAAGACCAGGAATGTAG...GCTGCAGTTTGATCCCAAGCACTGCGAAAGGAAGCTGGAGAGATCATAGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCCTGCAAATGCTTTCTAAGTTGCCTTGGCCATCATGTCTCTGCACAGCAACGGATGAGGGACGAATaGTCAAAGAAGGTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KACKCFLSCLGHHVSAQQRMRDE*SKKVFP Trigger: TGGGAAGACCTTCTTTGACCATTCGTCCCTCATCCG...TTGCTGTGCAGAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | TACTTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTAGGCTTCCTGCCAGTGTaGGTCAGCAGGTGCCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YLISLTFSKLICELQQGLGFLPV*VSRCRV Trigger: CACTCGGCACCTGCTGACCCACACTGGCAGGAAGCC...TAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAAGTA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR CAA 72 bp | TGTGCCAAGACCAGTCTGTCTGTCTCTCCCTATCTCTaGGCCTACTGCTTGTGGATCAGATTTAAGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CAKTSLSVSPYL*AYCLWIRFKFC Trigger: GCAGAACTTAAATCTGATCCACAAGCAGTAGGCCAAGAGATAGGGAGAGACAGACAGACTGGTCTTGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | GATTCCTCTCCTAACATCTGTCCTATGATCTCTCCAGCTTCCTTTCGCAGTGCTTTCAAATGTCACCAATaGCTGACATCTGGTAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DSSPNICPMISPASFRSAFKCHQ*LTSGRR Trigger: CCGCCTACCAGATGTCAGGCATTGGTGACATTTGAA...AGCACTGCGAAAGGAAGCTGGAGAGATCATAGGACAGATGTTAGGAGAGGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | AACTGTAAGCAAGGCCTGCAAATGCTTTCTAAGTTGCCTTGGCCATCATGTCTCGGATTTCTCTCAGTGTaGCTCTTGAAGCATCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NCKQGLQMLSKLPWPSCLGFLSV*LLKHLG Trigger: CCCTAGATGCTTCAAGAGGCACACTGAGAGAAATCC...GAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTTGCTTACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCAGCTTCCTTTCGCAGTGCTTGGGATCAAACTGCAGCTCCTCATGCATGAACTTTGCTTTCTATaGATTTCTCTCAGTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLQLPFAVLGIKLQLLMHELCFL*ISLSVP Trigger: AGGCACACTGAGAGAAATCCATAGAAAGCAAAGTTC...ATGCATGAGGAGCTGCAGTTTGATCCCAAGCACTGCGAAAGGAAGCTGGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | GCTTTGAAGTTTCAGAAGCCCTTGCCTAGACCAGTGTGCCAAGACCAGTCTGTCGAACTTTGCTTTCTATaGATTTCTCTCAGTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALKFQKPLPRPVCQDQSVELCFL*ISLSVP Trigger: AGGCACACTGAGAGAAATCCATAGAAAGCAAAGTTC...GACAGACTGGTCTTGGCACACTGGTCTAGGCAAGGGCTTCTGAAACTTCAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | TTGTGGATCAGATTTAAGTTCTGCTCCAGCACTGGGTCTGCCTGTCACCATGCTCCACCTGTTAGTGTTTaGATTTCTCGTTTAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LWIRFKFCSSTGSACHHAPPVSV*ISRLGH Trigger: ATGCCCTAAACGAGAAATCCAAACACTAACAGGTGG...AGCATGGTGACAGGCAGACCCAGTGCTGGAGCAGAACTTAAATCTGATCCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCCTGCAAATGCTTTCTAAGTTGCCTTGGCCATCATGTCTCTGCACAGCAACACTCACTACATTCCTaGTCTTGGTGTTTAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KACKCFLSCLGHHVSAQQHSLHS*SWCLVR Trigger: CCTCACTAAACACCAAGACCAGGAATGTAGTGAGTG...TTGCTGTGCAGAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR CAA 72 bp | TGGAACTGTAAGCAAGGCCTGCAAATGCTTTCTAAGTaGCCTTGGCCATCATGTCTCTGCACAGCAATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WNCKQGLQMLSK*PWPSCLCTAIE Trigger: CTCTATTGCTGTGCAGAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTTGCTTACAGTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | TTGCAAAAAGGGAAGACTCCCAAAGTCAAGGTTGTCTCATACCTGACCTTTAATAATGTCACCAATGCCTaGCATCTGGTAGGCGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LQKGKTPKVKVVSYLTFNNVTNA*HLVGGD Trigger: GTCTCCGCCTACCAGATGTCAGGCATTGGTGACATT...ATTAAAGGTCAGGTATGAGACAACCTTGACTTTGGGAGTCTTCCCTTTTTGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| CDS-3UTR TCA 90 bp | TTGCAAAAAGGGAAGACTCCCAAAGTCAAGGTTGTCTCATACCTGACCTTTAATTCCTCTGGTGTCGGATaGGGGACGAATGGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQKGKTPKVKVVSYLTFNSSGVG*GTNGQR Trigger: TCTTTGACCATTCGTCCCTCATCCGACACCAGAGGA...ATTAAAGGTCAGGTATGAGACAACCTTGACTTTGGGAGTCTTCCCTTTTTGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGCAGATTCATACTGAAGACCTCATTTCTCCTTGTGTCATGTAGGGTATTTTCCACTCGTCATCTGTaGAAGTCACCGCCACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGRFILKTSFLLVSCRVFSTRHL*KSPPHL Trigger: AAGATGTGGCGGTGACTTTCACAGATGACGAGTGGA...AAATACCCTACATGACACAAGGAGAAATGAGGTCTTCAGTATGAATCTGCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | AAATACAGGGATTCTCCAAGGAAACAGATGCATTTGGGTACTCAGGATCTAAAGTCCACTCGTCATCTGTaGAAGTCACCGCCACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KYRDSPRKQMHLGTQDLKSTRHL*KSPPHL Trigger: AAGATGTGGCGGTGACTTTCACAGATGACGAGTGGA...CTTTAGATCCTGAGTACCCAAATGCATCTGTTTCCTTGGAGAATCCCTGTATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| CDS-3UTR GCA 90 bp | AAATACAGGGATTCTCCAAGGAAACAGATGCATTTGGGTACTCAGGATCTAAAGGGTCAAAGAAGGCCTTaGCACATGCATCACACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KYRDSPRKQMHLGTQDLKGQRRP*HMHHTR Trigger: ACGAGTGTGATGCATGTGGCAAGGCCTTCTTTGACC...CTTTAGATCCTGAGTACCCAAATGCATCTGTTTCCTTGGAGAATCCCTGTATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTATGCGCAGCCTCTGTGCAGAATTTTGAATGTGGAGATTCATGGTTTAGTCTACATTCCTGGTCTTaGTGTTTAGTGAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELCAASVQNFECGDSWFSLHSWS*CLVRAF Trigger: GAAAGCCCTCACTAAACACCAAGACCAGGAATGTAG...ACTAAACCATGAATCTCCACATTCAAAATTCTGCACAGAGGCTGCGCATAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | AAATACAGGGATTCTCCAAGGAAACAGATGCATTTGGGTACTCAGGATCTAAAGCGGATGAGGGACGAATaGTCAAAGAAGGTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KYRDSPRKQMHLGTQDLKRMRDE*SKKVFP Trigger: TGGGAAGACCTTCTTTGACCATTCGTCCCTCATCCG...CTTTAGATCCTGAGTACCCAAATGCATCTGTTTCCTTGGAGAATCCCTGTATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTATGCGCAGCCTCTGTGCAGAATTTTGAATGTGGAGATTCATGGTTTAGTTCAGTGTGCACTTTTTaGTGTCTGTTTAGGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ELCAASVQNFECGDSWFSSVCTF*CLFREV Trigger: CACCTCCCTAAACAGACACCAAAAAGTGCACACTGA...ACTAAACCATGAATCTCCACATTCAAAATTCTGCACAGAGGCTGCGCATAGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR CAA 72 bp | CTATCACTGAGCTATGCGCAGCCTCTGTGCAGAATTTaGAATGTGGAGATTCATGGTTTAGTTTCTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSYAQPLCRI*NVEIHGLVSAL Trigger: GAGTGCAGAAACTAAACCATGAATCTCCACATTCAAAATTCTGCACAGAGGCTGCGCATAGCTCAGTGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| 3UTR CAA 72 bp | CCTGACACTCTTCTGCTTCAAGAAGCCAAAATGAATTaGTTTAGTAGCATGGGAGAGGACTGTTCGGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: PDTLLLQEAKMN*FSSMGEDCSAT Trigger: AGTTGCCGAACAGTCCTCTCCCATGCTACTAAACAAATTCATTTTGGCTTCTTGAAGCAGAAGAGTGTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGCAGATTCATACTGAAGACCTCATTTCTCCTTGTGTCATGTAGGGTATTTCCCCTTCTCTTGAACTaGAGAATCACATCAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: EGRFILKTSFLLVSCRVFPLLLN*RITSGR Trigger: TCGACCTGATGTGATTCTTCAGTTCAAGAGAAGGGG...AAATACCCTACATGACACAAGGAGAAATGAGGTCTTCAGTATGAATCTGCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | TTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTATTTTCCTCTGGTGTCGGATaGGGGACGAATGGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LISLTFSKLICELQQGLFSSGVG*GTNGQR Trigger: TCTTTGACCATTCGTCCCTCATCCGACACCAGAGGA...AAATAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | AAATACAGGGATTCTCCAAGGAAACAGATGCATTTGGGTACTCAGGATCTAAAGTTCAAATGTCACCAATaGCTGACATCTGGTAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KYRDSPRKQMHLGTQDLKFKCHQ*LTSGRR Trigger: CCGCCTACCAGATGTCAGGCATTGGTGACATTTGAA...CTTTAGATCCTGAGTACCCAAATGCATCTGTTTCCTTGGAGAATCCCTGTATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGCAGATTCATACTGAAGACCTCATTTCTCCTTGTGTCATGTAGGGTATTTCCAGTGTGTATCTTCTaGTGCTGCGTAAGAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGRFILKTSFLLVSCRVFPVCIF*CCVREE Trigger: CTCTTCTCTTACGCAGCACCAGAAGATACACACTGG...AAATACCCTACATGACACAAGGAGAAATGAGGTCTTCAGTATGAATCTGCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | TTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTATTTGCTCGCCCCTTCTCTTaGACTGAAGAATCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LISLTFSKLICELQQGLFARPFS*TEESHQ Trigger: CTGATGTGATTCTTCAGTTCAAGAGAAGGGGCGAGC...AAATAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | GAGCTATGCGCAGCCTCTGTGCAGAATTTTGAATGTGGAGATTCATGGTTTAGTGGGCATAGAGAACTTTaGTTTCTATGGATTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELCAASVQNFECGDSWFSGHREL*FLWISL Trigger: GAGAGAAATCCATAGAAAGCAAAGTTCTCTATGCCC...ACTAAACCATGAATCTCCACATTCAAAATTCTGCACAGAGGCTGCGCATAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | AAATACAGGGATTCTCCAAGGAAACAGATGCATTTGGGTACTCAGGATCTAAAGCACTCACTACATTCCTaGTCTTGGTGTTTAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KYRDSPRKQMHLGTQDLKHSLHS*SWCLVR Trigger: CCTCACTAAACACCAAGACCAGGAATGTAGTGAGTG...CTTTAGATCCTGAGTACCCAAATGCATCTGTTTCCTTGGAGAATCCCTGTATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110366.8 |
||
| CDS-3UTR TCA 90 bp | TTTTACTTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCCCCTTCTCTTGAACTaGAGAATCACATCAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: FYLISLTFSKLICELQQGPLLLN*RITSGR Trigger: TCGACCTGATGTGATTCTTCAGTTCAAGAGAAGGGG...GCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAAGTAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | TTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTATTTCCCCTTCTCTTGAACTaGAGAATCACATCAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LISLTFSKLICELQQGLFPLLLN*RITSGR Trigger: TCGACCTGATGTGATTCTTCAGTTCAAGAGAAGGGG...AAATAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | GAAGGCAGATTCATACTGAAGACCTCATTTCTCCTTGTGTCATGTAGGGTATTTTTTCTTGGATGGAGCTaGCATTTGATGCAAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EGRFILKTSFLLVSCRVFFLGWS*HLMQAF Trigger: AAAGGCTTGCATCAAATGTCAGCTCCATCCAAGAAA...AAATACCCTACATGACACAAGGAGAAATGAGGTCTTCAGTATGAATCTGCCTTC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | TACTTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTATCAGTGTGCACTTTTTaGTGTCTGTTTAGGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YLISLTFSKLICELQQGLSVCTF*CLFREV Trigger: CACCTCCCTAAACAGACACCAAAAAGTGCACACTGA...TAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR TCA 90 bp | TTTATTGATCACCTAATATTTGCAAGGCACGCTGTAAGACACAGAGACCTATTAGATGGAGCTGACATTTaGTGCAAGCCTTTATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FIDHLIFARHAVRHRDLLDGADI*CKPLSK Trigger: CTTGGATAAAGGCTTGCATCAAATGTCAGCTCCATC...TAATAGGTCTCTGTGTCTTACAGCGTGCCTTGCAAATATTAGGTGATCAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR GCA 90 bp | GAAGGCAGATTCATACTGAAGACCTCATTTCTCCTTGTGTCATGTAGGGTATTTGGGCATAGAGAACTTTaGTTTCTATGGATTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGRFILKTSFLLVSCRVFGHREL*FLWISL Trigger: GAGAGAAATCCATAGAAAGCAAAGTTCTCTATGCCC...AAATACCCTACATGACACAAGGAGAAATGAGGTCTTCAGTATGAATCTGCCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | TTTTACTTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCACTCACTACATTCCTaGTCTTGGTGTTTAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FYLISLTFSKLICELQQGHSLHS*SWCLVR Trigger: CCTCACTAAACACCAAGACCAGGAATGTAGTGAGTG...GCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAAGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | TTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTATTTTCAGTGTGCACTTTTTaGTGTCTGTTTAGGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LISLTFSKLICELQQGLFSVCTF*CLFREV Trigger: CACCTCCCTAAACAGACACCAAAAAGTGCACACTGA...AAATAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | TACTTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTAGAACTTTGCTTTCTATaGATTTCTCTCAGTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLISLTFSKLICELQQGLELCFL*ISLSVP Trigger: AGGCACACTGAGAGAAATCCATAGAAAGCAAAGTTC...TAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CCA 90 bp | TTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTATTTCCACCTGTTAGTGTTTaGATTTCTCGTTTAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LISLTFSKLICELQQGLFPPVSV*ISRLGH Trigger: ATGCCCTAAACGAGAAATCCAAACACTAACAGGTGG...AAATAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CAA 90 bp | TACTCGGACCCTGGAGCAGAGGTTGGGCTGAAGACAGCGGCCAGAGTTGGCAGACTCTCAGTGTGCCTCTaGAAGCATCTAGGGTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YSDPGAEVGLKTAARVGRLSVCL*KHLGSQ Trigger: CTGAGACCCTAGATGCTTCAAGAGGCACACTGAGAG...TCTGCCAACTCTGGCCGCTGTCTTCAGCCCAACCTCTGCTCCAGGGTCCGAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CAA 90 bp | TGTAGCACAGGAAGGAGGTGCACCGTTTACTCGGACCCTGGAGCAGAGGTTGGGTTAGAGCTGAACTCTTaGCCGCACACACTGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSTGRRCTVYSDPGAEVGLELNS*PHTLHS Trigger: TGAGTGCAGTGTGTGCGGCAAAGAGTTCAGCTCTAA...CCCAACCTCTGCTCCAGGGTCCGAGTAAACGGTGCACCTCCTTCCTGTGCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CAA 90 bp | TGTAGCACAGGAAGGAGGTGCACCGTTTACTCGGACCCTGGAGCAGAGGTTGGGGCTTTTTGCAAGTCCTaGCTTTGGGACTTTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSTGRRCTVYSDPGAEVGAFCKS*LWDFPS Trigger: AGAAGGAAAGTCCCAAAGCAAGGACTTGCAAAAAGC...CCCAACCTCTGCTCCAGGGTCCGAGTAAACGGTGCACCTCCTTCCTGTGCTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS TCA 90 bp | ACTGAAGAATCACATCAGGTCGAGGAACAGGAAGACCCAGAGAGATaGTGCTCTCATAGTTCTCTAGCATCACGGCCTTGTAGAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TEESHQVEEQEDPER*CSHSSLASRPCREP Trigger: GGGCTCTCTACAAGGCCGTGATGCTAGAGAACTATGAGAGCATCATCTCTCTGGGTCTTCCTGTTCCTCGACCTGATGTGATTCTTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 ENSMUST00000164551.2 |
||
| CDS CCA 90 bp | GCAAGCCTTTATCCAAGGAAAGGGGCTTTTTGCAAGTCCTTGCTTTaGGACTTTCCTTCTCTGGTTCCGGCCCACCTGTTAGTGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASLYPRKGAFCKSLL*DFPSLVPAHLLVFG Trigger: TCCAAACACTAACAGGTGGGCCGGAACCAGAGAAGGAAAGTCCCAAAGCAAGGACTTGCAAAAAGCCCCTTTCCTTGGATAAAGGCTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 ENSMUST00000164551.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCCTGCAAATGCTTTCTAAGTTGCCTTGGCCATCATGTCTCTGCACAGCAACTCTCAGTGTGCCTCTaGAAGCATCTAGGGTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KACKCFLSCLGHHVSAQQLSVCL*KHLGSQ Trigger: CTGAGACCCTAGATGCTTCAAGAGGCACACTGAGAG...TTGCTGTGCAGAGACATGATGGCCAAGGCAACTTAGAAAGCATTTGCAGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CAA 90 bp | TTGTGGATCAGATTTAAGTTCTGCTCCAGCACTGGGTCTGCCTGTCACCATGCTTTAGAGCTGAACTCTTaGCCGCACACACTGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: LWIRFKFCSSTGSACHHALELNS*PHTLHS Trigger: TGAGTGCAGTGTGTGCGGCAAAGAGTTCAGCTCTAA...AGCATGGTGACAGGCAGACCCAGTGCTGGAGCAGAACTTAAATCTGATCCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CAA 90 bp | CTGTCCTATGATCTCTCCAGCTTCCTTTCGCAGTGCTTGGGATCAAACTGCAGCACTACATTCCTGGTCTaGGTGTTTAGTGAGGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSYDLSSFLSQCLGSNCSTTFLV*VFSEGF Trigger: AAAGCCCTCACTAAACACCAAGACCAGGAATGTAGT...GCTGCAGTTTGATCCCAAGCACTGCGAAAGGAAGCTGGAGAGATCATAGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS-3UTR CAA 90 bp | GAGCTATGCGCAGCCTCTGTGCAGAATTTTGAATGTGGAGATTCATGGTTTAGTTTAGAGCTGAACTCTTaGCCGCACACACTGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ELCAASVQNFECGDSWFSLELNS*PHTLHS Trigger: TGAGTGCAGTGTGTGCGGCAAAGAGTTCAGCTCTAA...ACTAAACCATGAATCTCCACATTCAAAATTCTGCACAGAGGCTGCGCATAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
||
| CDS TCA 90 bp | ACATTCCTGGTCTTGGTGTTTAGTGAGGGCTTTCTTGGATGGAGCTaGCATTTGATGCAAGCCTTTATCCAAGGAAAGGGGCTTTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TFLVLVFSEGFLGWS*HLMQAFIQGKGLFA Trigger: TGCAAAAAGCCCCTTTCCTTGGATAAAGGCTTGCATCAAATGTCAGCTCCATCCAAGAAAGCCCTCACTAAACACCAAGACCAGGAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 ENSMUST00000164551.2 |
||
| CDS CCA 90 bp | GCTTTGGGACTTTCCTTCTCTGGTTCCGGCCCACCTGTTAGTGTTTaGATTTCTCGTTTAGGGCATAGAGAACTTTGCTTTCTATGGATT | + |
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Preference number: 5 (lower is better) Translates to: ALGLSFSGSGPPVSV*ISRLGHRELCFLWI Trigger: AATCCATAGAAAGCAAAGTTCTCTATGCCCTAAACGAGAAATCCAAACACTAACAGGTGGGCCGGAACCAGAGAAGGAAAGTCCCAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 ENSMUST00000164551.2 |
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| CDS CCA 90 bp | AGTGTTTGGATTTCTCGTTTAGGGCATAGAGAACTTTGCTTTCTATaGATTTCTCTCAGTGTGCCTCTTGAAGCATCTAGGGTCTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: SVWISRLGHRELCFL*ISLSVPLEASRVSG Trigger: GCCTGAGACCCTAGATGCTTCAAGAGGCACACTGAGAGAAATCCATAGAAAGCAAAGTTCTCTATGCCCTAAACGAGAAATCCAAACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 ENSMUST00000164551.2 |
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| CDS-3UTR CAA 90 bp | GAGCTATGCGCAGCCTCTGTGCAGAATTTTGAATGTGGAGATTCATGGTTTAGTACTACATTCCTGGTCTaGGTGTTTAGTGAGGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: ELCAASVQNFECGDSWFSTTFLV*VFSEGF Trigger: AAAGCCCTCACTAAACACCAAGACCAGGAATGTAGT...ACTAAACCATGAATCTCCACATTCAAAATTCTGCACAGAGGCTGCGCATAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| CDS-3UTR CAA 90 bp | TTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTATTTCTCTCAGTGTGCCTCTaGAAGCATCTAGGGTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LISLTFSKLICELQQGLFLSVCL*KHLGSQ Trigger: CTGAGACCCTAGATGCTTCAAGAGGCACACTGAGAG...AAATAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| CDS-3UTR CAA 90 bp | TACTTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCCTAACTACATTCCTGGTCTaGGTGTTTAGTGAGGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: YLISLTFSKLICELQQGLTTFLV*VFSEGF Trigger: AAAGCCCTCACTAAACACCAAGACCAGGAATGTAGT...TAGGCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| CDS-3UTR CAA 90 bp | TTTTACTTAATCTCTCTAACCTTCAGTAAGCTGATCTGTGAACTTCAACAAGGCGCTTTTTGCAAGTCCTaGCTTTGGGACTTTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: FYLISLTFSKLICELQQGAFCKS*LWDFPS Trigger: AGAAGGAAAGTCCCAAAGCAAGGACTTGCAAAAAGC...GCCTTGTTGAAGTTCACAGATCAGCTTACTGAAGGTTAGAGAGATTAAGTAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 |
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| CDS CAA 72 bp | AGCCTTTATCCAAGGAAAGGGGCTTTTTGCAAGTCCTaGCTTTGGGACTTTCCTTCTCTGGTTCCGGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SLYPRKGAFCKS*LWDFPSLVPAH Trigger: GTGGGCCGGAACCAGAGAAGGAAAGTCCCAAAGCAAGGACTTGCAAAAAGCCCCTTTCCTTGGATAAAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 ENSMUST00000164551.2 |
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| CDS CAA 90 bp | TGCAAGCCTTTATCCAAGGAAAGGGGCTTTTTGCAAGTCCTTGCTTaGGGACTTTCCTTCTCTGGTTCCGGCCCACCTGTTAGTGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: CKPLSKERGFLQVLA*GLSFSGSGPPVSVW Trigger: CCAAACACTAACAGGTGGGCCGGAACCAGAGAAGGAAAGTCCCAAAGCAAGGACTTGCAAAAAGCCCCTTTCCTTGGATAAAGGCTTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 ENSMUST00000164551.2 |
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| CDS TCA 72 bp | GTCTTGGTGTTTAGTGAGGGCTTTCTTGGATGGAGCTaGCATTTGATGCAAGCCTTTATCCAAGGAAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: VLVFSEGFLGWS*HLMQAFIQGKG Trigger: CCCCTTTCCTTGGATAAAGGCTTGCATCAAATGTCAGCTCCATCCAAGAAAGCCCTCACTAAACACCAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 ENSMUST00000164551.2 |
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| CDS TCA 72 bp | TGTTTAGTGAGGGCTTTCTTGGATGGAGCTGACATTTaGTGCAAGCCTTTATCCAAGGAAAGGGGCTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: CLVRAFLDGADI*CKPLSKERGFL Trigger: CAAAAAGCCCCTTTCCTTGGATAAAGGCTTGCATCAAATGTCAGCTCCATCCAAGAAAGCCCTCACTAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 ENSMUST00000164551.2 |
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| CDS GCA 72 bp | TTTGATGCAAGCCTTTATCCAAGGAAAGGGGCTTTTTaGAAGTCCTTGCTTTGGGACTTTCCTTCTCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: FDASLYPRKGAF*KSLLWDFPSLV Trigger: AACCAGAGAAGGAAAGTCCCAAAGCAAGGACTTGCAAAAAGCCCCTTTCCTTGGATAAAGGCTTGCATCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077422.12 ENSMUST00000110366.8 ENSMUST00000110368.9 ENSMUST00000164551.2 |
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