Pregenerated sensors for ZFP658 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056592Ensembl transcript IDs: ENSMUST00000005597.9, ENSMUST00000107972.8
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGTCTCTCTCCATTCTAGACCCAGTGCTGCACATCCAGTTGGGATaGTCTCTGCATTTCTATGTAGGGATGATGAGGGCCCCTCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: VSLSILDPVLHIQLG*SLHFYVGMMRAPQW Trigger: CCACTGAGGGGCCCTCATCATCCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGGTCTAGAATGGAGAGAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| 3UTR CCA 90 bp | GCATCGGATCTCATTATAGACGGTTGTGAGCCACCATGTAGTTGTTaGGAATTGAACTCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASDLIIDGCEPPCSC*ELNSGPLGEQPALL Trigger: TAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGAGTTCAATTCCCAACAACTACATGGTGGCTCACAACCGTCTATAATGAGATCCGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGGAATTGAACTCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATTGCTGCACATCCAGTTaGGATGCTCTCTGCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: CWELNSGPLGEQPALLSHCCTSS*DALCIS Trigger: AGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCA...ATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGAGTTCAATTCCCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| 3UTR CAA 90 bp | GATCTCATTATAGACGGTTGTGAGCCACCATGTAGTTGTTGGGAATaGAACTCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: DLIIDGCEPPCSCWE*NSGPLGEQPALLSH Trigger: ATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGAGTTCAATTCCCAACAACTACATGGTGGCTCACAACCGTCTATAATGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATCTCTCCAGCCCCAATCAGTGGGTTTTATTATaGAACAATTTCCTATGGCAT | + |
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Preference number: 2 (lower is better) Translates to: SGPLGEQPALLSHLSSPNQWVLL*NNFLWH Trigger: ATGCCATAGGAAATTGTTCCATAATAAAACCCACTG...ATTGGGGCTGGAGAGATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGACCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGATGAGGGCCCCTCAGTaGGTTTTATTATGGAACAAT | + |
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Preference number: 2 (lower is better) Translates to: LDPVLHIQLGCSLHFYVGMRAPQ*VLLWNN Trigger: ATTGTTCCATAATAAAACCCACTGAGGGGCCCTCAT...CCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGGTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| 3UTR-3UTR CAA 90 bp | TTGAACTCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATCTCTCCAGCGTGCTGCACATCCAGTaGGGATGCTCTCTGCATTTC | + |
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Preference number: 3 (lower is better) Translates to: LNSGPLGEQPALLSHLSSVLHIQ*GCSLHF Trigger: GAAATGCAGAGAGCATCCCAACTGGATGTGCAGCAC...GCTGGAGAGATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGAGTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| 3UTR GCA 72 bp | TCCATTCTAGACCCAGTGCTGCACATCCAGTTGGGATaGTCTCTGCATTTCTATGTAGGGATGATGAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: SILDPVLHIQLG*SLHFYVGMMRA Trigger: GGCCCTCATCATCCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGGTCTAGAATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| 3UTR CCA 72 bp | CTCATTATAGACGGTTGTGAGCCACCATGTAGTTGTTaGGAATTGAACTCAGGACCTCTGGGAGAGCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: LIIDGCEPPCSC*ELNSGPLGEQP Trigger: TGGCTGCTCTCCCAGAGGTCCTGAGTTCAATTCCCAACAACTACATGGTGGCTCACAACCGTCTATAATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR TCA 90 bp | TGTTGGGAATTGAACTCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATGGCTTCTCCCCCGTGTaGACCCGACGGTGCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: CWELNSGPLGEQPALLSHGFSPV*TRRCIF Trigger: GAAGATGCACCGTCGGGTTCACACGGGGGAGAAGCC...ATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGAGTTCAATTCCCAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR GCA 90 bp | CTAGACCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGTCCTGCTCCTGTGGGTaGAGTCTCTGGGCCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LDPVLHIQLGCSLHFYVGSCSCG*SLWAFW Trigger: CCAGAAGGCCCAGAGACTGCACCCACAGGAGCAGGA...CCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGGTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR GCA 90 bp | TCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATCTCTCCAGCCCCAATCTTTCCCACAGATGCTaGACTTGTGAGGCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SGPLGEQPALLSHLSSPNLSHRC*TCEASP Trigger: TGGAGAAGCCTCACAAGTGCAGCATCTGTGGGAAAG...ATTGGGGCTGGAGAGATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CCA 90 bp | CTAGACCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGCCCTTCCTGCTCCTGTaGGTGCAGTCTCTGGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LDPVLHIQLGCSLHFYVGPFLLL*VQSLGL Trigger: AAGGCCCAGAGACTGCACCCACAGGAGCAGGAAGGG...CCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGGTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR TCA 90 bp | TCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATCTCTCCAGCCCCAATGTCTTCCCGCATTTTTaGCAGACAAAAGGTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SGPLGEQPALLSHLSSPNVFPHF*QTKGLS Trigger: GGAGAGACCTTTTGTCTGTCAAAAATGCGGGAAGAC...ATTGGGGCTGGAGAGATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| 3UTR CAA 72 bp | ATAGACGGTTGTGAGCCACCATGTAGTTGTTGGGAATaGAACTCAGGACCTCTGGGAGAGCAGCCAGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: IDGCEPPCSCWE*NSGPLGEQPAL Trigger: GAGCGCTGGCTGCTCTCCCAGAGGTCCTGAGTTCAATTCCCAACAACTACATGGTGGCTCACAACCGTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR GCA 90 bp | TGTTGGGAATTGAACTCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATGGTGGGATCTGGTTTTaGCCATCTCTTTGTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: CWELNSGPLGEQPALLSHGGIWF*PSLCAG Trigger: CCCTGCACAAAGAGATGGGCAAAACCAGATCCCACC...ATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGAGTTCAATTCCCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CCA 90 bp | CCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGATGATAAGGATGTGGGAGCTTaGCCTCTCCTGTCCGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: PSAAHPVGMLSAFLCRDDKDVGA*PLLSVP Trigger: AGGCACGGACAGGAGAGGCCAAGCTCCCACATCCTT...ATCATCCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CCA 90 bp | CTAGACCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGTGTGGGTGCAGTCTCTaGGCCTTCTGGGACAATTTC | + |
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Preference number: 4 (lower is better) Translates to: LDPVLHIQLGCSLHFYVGCGCSL*AFWDNF Trigger: GAAATTGTCCCAGAAGGCCCAGAGACTGCACCCACA...CCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGGTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CCA 90 bp | TCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATCTCTCCAGCCCCAATAAACCTGACCTACCATaGAAGCCTTTTCCACATTCA | + |
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Preference number: 4 (lower is better) Translates to: SGPLGEQPALLSHLSSPNKPDLP*KPFPHS Trigger: TGAATGTGGAAAAGGCTTCCATGGTAGGTCAGGTTT...ATTGGGGCTGGAGAGATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR TCA 90 bp | GACCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGATGATGGGACGTCAGTGCTaGCTTCTGGATGAAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: DPVLHIQLGCSLHFYVGMMGRQC*LLDEGL Trigger: AAGACCTTCATCCAGAAGTCAGCACTGACGTCCCAT...CATCCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR GCA 90 bp | TGTTGGGAATTGAACTCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATGGCCTCTCCTGTCCGTaGCTCCTTTCTTTTCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: CWELNSGPLGEQPALLSHGLSCP*LLSFLY Trigger: ATAAAGAAAAGAAAGGAGGCACGGACAGGAGAGGCC...ATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGAGTTCAATTCCCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR GCA 90 bp | CTCTCTGCATTTCTATGTAGGGATGATGAGGGCCCCTCAGTGGGTTTTATTATGGAGCACCACAAGCCATaGCTTGTGACTGCGCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: LSAFLCRDDEGPSVGFIMEHHKP*LVTALA Trigger: GGCAAGCGCAGTCACAAGGCATGGCTTGTGGTGCTC...CATAATAAAACCCACTGAGGGGCCCTCATCATCCCTACATAGAAATGCAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR GCA 90 bp | TGTTGGGAATTGAACTCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATCCCACAGTCTCTATCTaGTCGCGCTGTTTTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: CWELNSGPLGEQPALLSHPTVSI*SRCFLV Trigger: AACAAGAAAACAGCGCGAGCAGATAGAGACTGTGGG...ATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGAGTTCAATTCCCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR TCA 90 bp | GACCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGATGATGAGATGTCAGCTGTaGCCTCTGAAAGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: DPVLHIQLGCSLHFYVGMMRCQL*PLKEGL Trigger: AAGGCCTTCTTTCAGAGGTCACAGCTGACATCTCAT...CATCCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR GCA 90 bp | CTAGACCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGCCTTGTGACTGCGCTTaGCTTACTAGTTTGGAATGC | + |
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Preference number: 4 (lower is better) Translates to: LDPVLHIQLGCSLHFYVGPCDCA*LTSLEC Trigger: GCATTCCAAACTAGTAAGGCAAGCGCAGTCACAAGG...CCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGGTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR GCA 90 bp | CCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGATGATGGGTGGGAACTTTTCTaGACTGGTTACCTTTGCACG | + |
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Preference number: 4 (lower is better) Translates to: PSAAHPVGMLSAFLCRDDGWELF*TGYLCT Trigger: CGTGCAAAGGTAACCAGTGCAGAAAAGTTCCCACCC...ATCATCCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CCA 90 bp | TGTTGGGAATTGAACTCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATCTTGCCTTACTAGTTTaGAATGCTGCCTCCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: CWELNSGPLGEQPALLSHLALLV*NAASSD Trigger: ATCTGAGGAGGCAGCATTCCAAACTAGTAAGGCAAG...ATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGAGTTCAATTCCCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR GCA 90 bp | CTCTCTGCATTTCTATGTAGGGATGATGAGGGCCCCTCAGTGGGTTTTATTATGTGCTGCCTCCTCAGATaGTTTCTGCTGAGGCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: LSAFLCRDDEGPSVGFIMCCLLR*FLLRPV Trigger: TACAGGCCTCAGCAGAAAGCATCTGAGGAGGCAGCA...CATAATAAAACCCACTGAGGGGCCCTCATCATCCCTACATAGAAATGCAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGCATTTCTATGTAGGGATGATGAGGGCCCCTCAGTGGGTTTTATTATGGACACCAACAAGGATGTaGGAGCTTGGCCTCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: SLHFYVGMMRAPQWVLLWTPTRM*ELGLSC Trigger: ACAGGAGAGGCCAAGCTCCCACATCCTTGTTGGTGT...CCATAATAAAACCCACTGAGGGGCCCTCATCATCCCTACATAGAAATGCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CCA 90 bp | TGTTGGGAATTGAACTCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATTCTGTCAGTTGTTTATaGGTGGGAACTTTTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: CWELNSGPLGEQPALLSHSVSCL*VGTFLH Trigger: GTGCAGAAAAGTTCCCACCCATAAACAACTGACAGA...ATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGAGTTCAATTCCCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CCA 90 bp | CTAGACCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGTTCAACACAGACTTCTaGAGGAATGCCTTCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: LDPVLHIQLGCSLHFYVGFNTDF*RNAFPH Trigger: ATGTGGGAAGGCATTCCTCCAGAAGTCTGTGTTGAA...CCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGGTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR TCA 90 bp | TCTCTGCATTTCTATGTAGGGATGATGAGGGCCCCTCAGTGGGTTTTATTATGGGGCTTGACTTTCGCTTaGAGGCTTTTCCACAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: SLHFYVGMMRAPQWVLLWGLTFA*RLFHSH Trigger: GTGACTGTGGAAAAGCCTTCAAGCGAAAGTCAAGCC...CCATAATAAAACCCACTGAGGGGCCCTCATCATCCCTACATAGAAATGCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR TCA 90 bp | CTCTCTGCATTTCTATGTAGGGATGATGAGGGCCCCTCAGTGGGTTTTATTATGATGCGTGCTGAGGATTaGTTTCTGCTTGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LSAFLCRDDEGPSVGFIMMRAED*FLLEGL Trigger: AAGGCCTTCAAGCAGAAATCAATCCTCAGCACGCAT...CATAATAAAACCCACTGAGGGGCCCTCATCATCCCTACATAGAAATGCAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CCA 90 bp | CCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGATGATTCAGTTGTTTATGGGTaGGAACTTTTCTGCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: PSAAHPVGMLSAFLCRDDSVVYG*ELFCTG Trigger: ACCAGTGCAGAAAAGTTCCCACCCATAAACAACTGA...ATCATCCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR TCA 90 bp | TCTCTGCATTTCTATGTAGGGATGATGAGGGCCCCTCAGTGGGTTTTATTATGGAGGCCTGTAAAACTCTaGTTCCACTTCTTGACACCA | + |
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Preference number: 4 (lower is better) Translates to: SLHFYVGMMRAPQWVLLWRPVKL*FHFLTP Trigger: TGGTGTCAAGAAGTGGAATCAGAGTTTTACAGGCCT...CCATAATAAAACCCACTGAGGGGCCCTCATCATCCCTACATAGAAATGCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGCATTTCTATGTAGGGATGATGAGGGCCCCTCAGTGGGTTTTATTATGGGGAACTTTTCTGCACTaGTTACCTTTGCACGGATTC | + |
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Preference number: 4 (lower is better) Translates to: SLHFYVGMMRAPQWVLLWGTFLH*LPLHGF Trigger: GAATCCGTGCAAAGGTAACCAGTGCAGAAAAGTTCC...CCATAATAAAACCCACTGAGGGGCCCTCATCATCCCTACATAGAAATGCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR GCA 90 bp | TCTCTGCATTTCTATGTAGGGATGATGAGGGCCCCTCAGTGGGTTTTATTATGGCTTACTAGTTTGGAATaGTGCCTCCTCAGATGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SLHFYVGMMRAPQWVLLWLTSLE*CLLRCF Trigger: AAAGCATCTGAGGAGGCAGCATTCCAAACTAGTAAG...CCATAATAAAACCCACTGAGGGGCCCTCATCATCCCTACATAGAAATGCAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR TCA 90 bp | TATGAGGAAATATGCTTCACACAAAAACTGAGCCTAAAAAGAACTGTGTCTACTTCTTGCGGGAGGAGGTaGGCAGATGTAACAAGACCA | + |
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Preference number: 4 (lower is better) Translates to: YEEICFTQKLSLKRTVSTSCGRR*ADVTRP Trigger: TGGTCTTGTTACATCTGCTCACCTCCTCCCGCAAGA...AGTAGACACAGTTCTTTTTAGGCTCAGTTTTTGTGTGAAGCATATTTCCTCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR TCA 90 bp | TATGAGGAAATATGCTTCACACAAAAACTGAGCCTAAAAAGAACTGTGTCTACTGCTTCCCCACACTTGTaGCAGACAAAAGGTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: YEEICFTQKLSLKRTVSTASPHL*QTKGPS Trigger: AGAAGGACCTTTTGTCTGTCACAAGTGTGGGGAAGC...AGTAGACACAGTTCTTTTTAGGCTCAGTTTTTGTGTGAAGCATATTTCCTCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR TCA 90 bp | TATGAGGAAATATGCTTCACACAAAAACTGAGCCTAAAAAGAACTGTGTCTACTTCTGATTCCACTTCTTaGCACCAACAAGGATGTGGG | + |
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Preference number: 4 (lower is better) Translates to: YEEICFTQKLSLKRTVSTSDSTS*HQQGCG Trigger: CCCACATCCTTGTTGGTGTCAAGAAGTGGAATCAGA...AGTAGACACAGTTCTTTTTAGGCTCAGTTTTTGTGTGAAGCATATTTCCTCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR GCA 90 bp | TATGAGGAAATATGCTTCACACAAAAACTGAGCCTAAAAAGAACTGTGTCTACTAGACTTCTGGAGGAATaGCTTCCCACATTTTTGACA | + |
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Preference number: 4 (lower is better) Translates to: YEEICFTQKLSLKRTVSTRLLEE*LPTFLT Trigger: TGTCAAAAATGTGGGAAGGCATTCCTCCAGAAGTCT...AGTAGACACAGTTCTTTTTAGGCTCAGTTTTTGTGTGAAGCATATTTCCTCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CAA 90 bp | TCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATCTCTCCAGCCCCAATCTCGAAGTTGGCCCTTaGAAGCCAGGGCCTTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: SGPLGEQPALLSHLSSPNLEVGP*KPGPSH Trigger: GTGGGAAGGCCCTGGCTTCAAAGGGCCAACTTCGAG...ATTGGGGCTGGAGAGATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CAA 90 bp | TCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATCTCTCCAGCCCCAATGCTCGCGCTGTTTTCTaGTTGAGGGAAGCCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SGPLGEQPALLSHLSSPNARAVF*LREAPG Trigger: TCCTGGGGCTTCCCTCAACAAGAAAACAGCGCGAGC...ATTGGGGCTGGAGAGATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS GCA 90 bp | TTCTTGTTGAGGGAAGCCCCAGGACTCCAGGGTGGGATCTGGTTTTaGCCATCTCTTTGTGCAGGGTCAGGATCTTGCCACAGTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: FLLREAPGLQGGIWF*PSLCAGSGSCHSSS Trigger: AGAAGAACTGTGGCAAGATCCTGACCCTGCACAAAGAGATGGGCAAAACCAGATCCCACCCTGGAGTCCTGGGGCTTCCCTCAACAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS-3UTR CAA 90 bp | CTAGACCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGCTCGCCTGTGTGAATTaGCTGATGGGACGTCAGTGC | + |
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Preference number: 5 (lower is better) Translates to: LDPVLHIQLGCSLHFYVGLACVN*LMGRQC Trigger: GCACTGACGTCCCATCAGCAAATTCACACAGGCGAG...CCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGGTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CAA 90 bp | CCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGATGATGGGTGGGATCTGGTTTaGCCCATCTCTTTGTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PSAAHPVGMLSAFLCRDDGWDLV*PISLCR Trigger: CCTGCACAAAGAGATGGGCAAAACCAGATCCCACCC...ATCATCCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CAA 90 bp | TTGAACTCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATCTCTCCAGCTGCCTTCCCACATTTTaGACAGACAAAAGATCTCCC | + |
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Preference number: 5 (lower is better) Translates to: LNSGPLGEQPALLSHLSSCLPTF*TDKRSP Trigger: GGGAGATCTTTTGTCTGTCAAAAATGTGGGAAGGCA...GCTGGAGAGATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGAGTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CAA 90 bp | CTCTCTGCATTTCTATGTAGGGATGATGAGGGCCCCTCAGTGGGTTTTATTATGCGCGCTGTTTTCTTGTaGAGGGAAGCCCCAGGACTC | + |
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Preference number: 5 (lower is better) Translates to: LSAFLCRDDEGPSVGFIMRAVFL*REAPGL Trigger: GAGTCCTGGGGCTTCCCTCAACAAGAAAACAGCGCG...CATAATAAAACCCACTGAGGGGCCCTCATCATCCCTACATAGAAATGCAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CAA 90 bp | TTGAACTCAGGACCTCTGGGAGAGCAGCCAGCGCTCTTAAGCCATCTCTCCAGCAGCTGGGATGTATTATaGAATGATTTGCCACAGTCC | + |
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Preference number: 5 (lower is better) Translates to: LNSGPLGEQPALLSHLSSSWDVL*NDLPQS Trigger: GGACTGTGGCAAATCATTCAATAATACATCCCAGCT...GCTGGAGAGATGGCTTAAGAGCGCTGGCTGCTCTCCCAGAGGTCCTGAGTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CAA 90 bp | CTAGACCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGGAGATGCTCTTTCAGTaGGGAGGAGTTGCTGAACGA | + |
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Preference number: 5 (lower is better) Translates to: LDPVLHIQLGCSLHFYVGEMLFQ*GGVAER Trigger: TCGTTCAGCAACTCCTCCCAACTGAAAGAGCATCTC...CCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGGTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CAA 90 bp | CCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGATGATGTTTTGCCCATCTCTTaGTGCAGGGTCAGGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSAAHPVGMLSAFLCRDDVLPIS*CRVRIL Trigger: CAAGATCCTGACCCTGCACAAAGAGATGGGCAAAAC...ATCATCCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CAA 90 bp | CTCTCTGCATTTCTATGTAGGGATGATGAGGGCCCCTCAGTGGGTTTTATTATGGCTTGCCTTACTAGTTaGGAATGCTGCCTCCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: LSAFLCRDDEGPSVGFIMACLTS*ECCLLR Trigger: TCTGAGGAGGCAGCATTCCAAACTAGTAAGGCAAGC...CATAATAAAACCCACTGAGGGGCCCTCATCATCCCTACATAGAAATGCAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CAA 90 bp | CTCTCTGCATTTCTATGTAGGGATGATGAGGGCCCCTCAGTGGGTTTTATTATGTTCAGTTGGGAGGAGTaGCTGAACGACTTCGCACAA | + |
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Preference number: 5 (lower is better) Translates to: LSAFLCRDDEGPSVGFIMFSWEE*LNDFAQ Trigger: TTGTGCGAAGTCGTTCAGCAACTCCTCCCAACTGAA...CATAATAAAACCCACTGAGGGGCCCTCATCATCCCTACATAGAAATGCAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CAA 90 bp | CCCAGTGCTGCACATCCAGTTGGGATGCTCTCTGCATTTCTATGTAGGGATGATGTATTATTGAATGATTaGCCACAGTCCCGACACTCA | + |
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Preference number: 5 (lower is better) Translates to: PSAAHPVGMLSAFLCRDDVLLND*PQSRHS Trigger: TGAGTGTCGGGACTGTGGCAAATCATTCAATAATAC...ATCATCCCTACATAGAAATGCAGAGAGCATCCCAACTGGATGTGCAGCACTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS TCA 90 bp | CGAAGAATTGTACAGTTAGCATTAGAAGAGTCTTGCGGGAGGAGGTaGGCAGATGTAACAAGACCATTCAGCTGTTTTGTGACACTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRIVQLALEESCGRR*ADVTRPFSCFVTLP Trigger: AGGCAGTGTCACAAAACAGCTGAATGGTCTTGTTACATCTGCTCACCTCCTCCCGCAAGACTCTTCTAATGCTAACTGTACAATTCTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CCA 90 bp | GCTTCTTTCTCTGTCAGTTGTTTATGGGTGGGAACTTTTCTGCACTaGTTACCTTTGCACGGATTCCATGTTTCACGAAGAATTGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: ASFSVSCLWVGTFLH*LPLHGFHVSRRIVQ Trigger: CTGTACAATTCTTCGTGAAACATGGAATCCGTGCAAAGGTAACCAGTGCAGAAAAGTTCCCACCCATAAACAACTGACAGAGAAAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CCA 90 bp | GTTTCTCACGAGAATGAGCTTCTTTCTCTGTCAGTTGTTTATGGGTaGGAACTTTTCTGCACTGGTTACCTTTGCACGGATTCCATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VSHENELLSLSVVYG*ELFCTGYLCTDSMF Trigger: AAACATGGAATCCGTGCAAAGGTAACCAGTGCAGAAAAGTTCCCACCCATAAACAACTGACAGAGAAAGAAGCTCATTCTCGTGAGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS GCA 90 bp | AATGAGCTTCTTTCTCTGTCAGTTGTTTATGGGTGGGAACTTTTCTaGACTGGTTACCTTTGCACGGATTCCATGTTTCACGAAGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: NELLSLSVVYGWELF*TGYLCTDSMFHEEL Trigger: CAATTCTTCGTGAAACATGGAATCCGTGCAAAGGTAACCAGTGCAGAAAAGTTCCCACCCATAAACAACTGACAGAGAAAGAAGCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS TCA 90 bp | AAGACTTTTCTACATTCCGTGCCTTCATCTAGTTTCTCACGAGAATaGGCTTCTTTCTCTGTCAGTTGTTTATGGGTGGGAACTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KTFLHSVPSSSFSRE*ASFSVSCLWVGTFL Trigger: CAGAAAAGTTCCCACCCATAAACAACTGACAGAGAAAGAAGCTCATTCTCGTGAGAAACTAGATGAAGGCACGGAATGTAGAAAAGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS-3UTR CAA 90 bp | TATGAGGAAATATGCTTCACACAAAAACTGAGCCTAAAAAGAACTGTGTCTACTTTTTGTGACACTGCCTaGCTCTTCACCGTTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YEEICFTQKLSLKRTVSTFCDTA*LFTVGF Trigger: GAAGCCAACGGTGAAGAGCAAGGCAGTGTCACAAAA...AGTAGACACAGTTCTTTTTAGGCTCAGTTTTTGTGTGAAGCATATTTCCTCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS-3UTR CAA 90 bp | TATGAGGAAATATGCTTCACACAAAAACTGAGCCTAAAAAGAACTGTGTCTACTCTCTGGGTGAGTTTCTaGATGGGAGGCAAACTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: YEEICFTQKLSLKRTVSTLWVSF*MGGKLC Trigger: ACAGAGTTTGCCTCCCATCAAGAAACTCACCCAGAG...AGTAGACACAGTTCTTTTTAGGCTCAGTTTTTGTGTGAAGCATATTTCCTCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS GCA 90 bp | GTTTACAGAAAGCAGATTCGTCATAGAAGACTTTTCTACATTCCGTaGCTTCATCTAGTTTCTCACGAGAATGAGCTTCTTTCTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VYRKQIRHRRLFYIP*LHLVSHENELLSLS Trigger: TGACAGAGAAAGAAGCTCATTCTCGTGAGAAACTAGATGAAGGCACGGAATGTAGAAAAGTCTTCTATGACGAATCTGCTTTCTGTAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS-3UTR CAA 90 bp | TATGAGGAAATATGCTTCACACAAAAACTGAGCCTAAAAAGAACTGTGTCTACTGGTCTTCCCGCATTTTaGACAGACAAAAGGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: YEEICFTQKLSLKRTVSTGLPAF*TDKRSL Trigger: GAGAGACCTTTTGTCTGTCAAAAATGCGGGAAGACC...AGTAGACACAGTTCTTTTTAGGCTCAGTTTTTGTGTGAAGCATATTTCCTCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000107972.8 |
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| CDS GCA 72 bp | TCCTCAAAGGACACCAATCTCTCACGGGACCCTTCCTaGTCCTGTGGGTGCAGTCTCTGGGCCTTCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSKDTNLSRDPS*SCGCSLWAFWD Trigger: GTCCCAGAAGGCCCAGAGACTGCACCCACAGGAGCAGGAAGGGTCCCGTGAGAGATTGGTGTCCTTTGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS GCA 72 bp | AGGGAAGCCCCAGGACTCCAGGGTGGGATCTGGTTTTaGCCATCTCTTTGTGCAGGGTCAGGATCTTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: REAPGLQGGIWF*PSLCAGSGSCH Trigger: GTGGCAAGATCCTGACCCTGCACAAAGAGATGGGCAAAACCAGATCCCACCCTGGAGTCCTGGGGCTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS GCA 72 bp | GGTCTTCCCGGGCTCTTTCCACCCACAGTCTCTATCTaGTCGCGCTGTTTTCTTGTTGAGGGAAGCCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLPGLFPPTVSI*SRCFLVEGSPR Trigger: CCTGGGGCTTCCCTCAACAAGAAAACAGCGCGAGCAGATAGAGACTGTGGGTGGAAAGAGCCCGGGAAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CAA 72 bp | GAGGGAAGCCCCAGGACTCCAGGGTGGGATCTGGTTTaGCCCATCTCTTTGTGCAGGGTCAGGATCTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: EGSPRTPGWDLV*PISLCRVRILP Trigger: TGGCAAGATCCTGACCCTGCACAAAGAGATGGGCAAAACCAGATCCCACCCTGGAGTCCTGGGGCTTCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CAA 72 bp | CACCCACAGTCTCTATCTGCTCGCGCTGTTTTCTTGTaGAGGGAAGCCCCAGGACTCCAGGGTGGGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HPQSLSARAVFL*REAPGLQGGIW Trigger: CCAGATCCCACCCTGGAGTCCTGGGGCTTCCCTCAACAAGAAAACAGCGCGAGCAGATAGAGACTGTGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CCA 72 bp | GGACACCAATCTCTCACGGGACCCTTCCTGCTCCTGTaGGTGCAGTCTCTGGGCCTTCTGGGACAATTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GHQSLTGPFLLL*VQSLGLLGQFH Trigger: ATGAAATTGTCCCAGAAGGCCCAGAGACTGCACCCACAGGAGCAGGAAGGGTCCCGTGAGAGATTGGTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CAA 72 bp | TTCCACCCACAGTCTCTATCTGCTCGCGCTGTTTTCTaGTTGAGGGAAGCCCCAGGACTCCAGGGTGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: FHPQSLSARAVF*LREAPGLQGGI Trigger: GATCCCACCCTGGAGTCCTGGGGCTTCCCTCAACAAGAAAACAGCGCGAGCAGATAGAGACTGTGGGTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CAA 90 bp | TTTCTTGTTGAGGGAAGCCCCAGGACTCCAGGGTGGGATCTGGTTTaGCCCATCTCTTTGTGCAGGGTCAGGATCTTGCCACAGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLVEGSPRTPGWDLV*PISLCRVRILPQFF Trigger: GAAGAACTGTGGCAAGATCCTGACCCTGCACAAAGAGATGGGCAAAACCAGATCCCACCCTGGAGTCCTGGGGCTTCCCTCAACAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS TCA 72 bp | GAACCCGACGGTGCATCTTCAGTTGGGATGCGTAAGTaGACGATTTCCCACAGTCGCTGCATCTGTGGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: EPDGASSVGMRK*TISHSRCICGN Trigger: ATTCCCACAGATGCAGCGACTGTGGGAAATCGTTCACTTACGCATCCCAACTGAAGATGCACCGTCGGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CAA 72 bp | CAAGCCATGCCTTGTGACTGCGCTTGCCTTACTAGTTaGGAATGCTGCCTCCTCAGATGCTTTCTGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QAMPCDCACLTS*ECCLLRCFLLR Trigger: CCTCAGCAGAAAGCATCTGAGGAGGCAGCATTCCAAACTAGTAAGGCAAGCGCAGTCACAAGGCATGGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CAA 90 bp | CGAGCACCACAAGCCATGCCTTGTGACTGCGCTTGCCTTACTAGTTaGGAATGCTGCCTCCTCAGATGCTTTCTGCTGAGGCCTGTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: RAPQAMPCDCACLTS*ECCLLRCFLLRPVK Trigger: TTTTACAGGCCTCAGCAGAAAGCATCTGAGGAGGCAGCATTCCAAACTAGTAAGGCAAGCGCAGTCACAAGGCATGGCTTGTGGTGCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CAA 90 bp | TGCATAAGGCGTCTCCCCGGTATGAATGCGGAGATGCTCTTTCAGTaGGGAGGAGTTGCTGAACGACTTCGCACAATAGTCGCATTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: CIRRLPGMNAEMLFQ*GGVAERLRTIVAFV Trigger: TACAAATGCGACTATTGTGCGAAGTCGTTCAGCAACTCCTCCCAACTGAAAGAGCATCTCCGCATTCATACCGGGGAGACGCCTTATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS TCA 72 bp | CTCCTCAGATGCTTTCTGCTGAGGCCTGTAAAACTCTaGTTCCACTTCTTGACACCAACAAGGATGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLRCFLLRPVKL*FHFLTPTRMWE Trigger: CTCCCACATCCTTGTTGGTGTCAAGAAGTGGAATCAGAGTTTTACAGGCCTCAGCAGAAAGCATCTGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS TCA 72 bp | GAATTCGATGATGGACCGTCAGCTGGGATGTGTGACTaGATGATTTCCCGCAGTAATGGCACGTATAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: EFDDGPSAGMCD*MISRSNGTYKA Trigger: AGCCTTATACGTGCCATTACTGCGGGAAATCATTCAGTCACACATCCCAGCTGACGGTCCATCATCGAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS TCA 72 bp | CACTCGTGGTGTGTTTGTCTGATATGGATCTTCTGGTaGACGGTGAGGCTTGACTTTCGCTTGAAGGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HSWCVCLIWIFW*TVRLDFRLKAF Trigger: AAAAGCCTTCAAGCGAAAGTCAAGCCTCACCGTTCACCAGAAGATCCATATCAGACAAACACACCACGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS GCA 72 bp | TGCCACAGTTCTTCTAAAATCGAGCACCACAAGCCATaGCTTGTGACTGCGCTTGCCTTACTAGTTTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: CHSSSKIEHHKP*LVTALALLVWN Trigger: ATTCCAAACTAGTAAGGCAAGCGCAGTCACAAGGCATGGCTTGTGGTGCTCGATTTTAGAAGAACTGTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS GCA 72 bp | CTTGTGACAGACAAAAGGTCCTTCTCCAGCGTGAGCTaGCTGGTGTTTACAGAAAGCAGATTCGTCATAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LVTDKRSFSSVS*LVFTESRFVIE Trigger: TTCTATGACGAATCTGCTTTCTGTAAACACCAGGCAGCTCACGCTGGAGAAGGACCTTTTGTCTGTCACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS TCA 72 bp | GTACAGTTAGCATTAGAAGAGTCTTGCGGGAGGAGGTaGGCAGATGTAACAAGACCATTCAGCTGTTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VQLALEESCGRR*ADVTRPFSCFV Trigger: CACAAAACAGCTGAATGGTCTTGTTACATCTGCTCACCTCCTCCCGCAAGACTCTTCTAATGCTAACTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CAA 72 bp | TTCAGCTGTTTTGTGACACTGCCTTGCTCTTCACCGTaGGCTTCAAGGTTAGGGTTCAAACGTTTTGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: FSCFVTLPCSSP*ASRLGFKRFAS Trigger: ACTTGCAAAACGTTTGAACCCTAACCTTGAAGCCAACGGTGAAGAGCAAGGCAGTGTCACAAAACAGCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CAA 72 bp | TGTAACAAGACCATTCAGCTGTTTTGTGACACTGCCTaGCTCTTCACCGTTGGCTTCAAGGTTAGGGTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: CNKTIQLFCDTA*LFTVGFKVRVQ Trigger: TTGAACCCTAACCTTGAAGCCAACGGTGAAGAGCAAGGCAGTGTCACAAAACAGCTGAATGGTCTTGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS GCA 72 bp | CTTTCTCTGTCAGTTGTTTATGGGTGGGAACTTTTCTaGACTGGTTACCTTTGCACGGATTCCATGTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LSLSVVYGWELF*TGYLCTDSMFH Trigger: GTGAAACATGGAATCCGTGCAAAGGTAACCAGTGCAGAAAAGTTCCCACCCATAAACAACTGACAGAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CCA 72 bp | TCTGTCAGTTGTTTATGGGTGGGAACTTTTCTGCACTaGTTACCTTTGCACGGATTCCATGTTTCACGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SVSCLWVGTFLH*LPLHGFHVSRR Trigger: TCTTCGTGAAACATGGAATCCGTGCAAAGGTAACCAGTGCAGAAAAGTTCCCACCCATAAACAACTGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CCA 72 bp | GAGAATGAGCTTCTTTCTCTGTCAGTTGTTTATGGGTaGGAACTTTTCTGCACTGGTTACCTTTGCACGGAT | + |
|
Preference number: 6 (lower is better) Translates to: ENELLSLSVVYG*ELFCTGYLCTD Trigger: ATCCGTGCAAAGGTAACCAGTGCAGAAAAGTTCCCACCCATAAACAACTGACAGAGAAAGAAGCTCATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS GCA 72 bp | GTTTATGGGTGGGAACTTTTCTGCACTGGTTACCTTTaGACGGATTCCATGTTTCACGAAGAATTGTACAGT | + |
|
Preference number: 6 (lower is better) Translates to: VYGWELFCTGYL*TDSMFHEELYS Trigger: ACTGTACAATTCTTCGTGAAACATGGAATCCGTGCAAAGGTAACCAGTGCAGAAAAGTTCCCACCCATAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CAA 72 bp | TGTTTATGGGTGGGAACTTTTCTGCACTGGTTACCTTaGCACGGATTCCATGTTTCACGAAGAATTGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: CLWVGTFLHWLP*HGFHVSRRIVQ Trigger: CTGTACAATTCTTCGTGAAACATGGAATCCGTGCAAAGGTAACCAGTGCAGAAAAGTTCCCACCCATAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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| CDS CAA 90 bp | TCTGTCAGTTGTTTATGGGTGGGAACTTTTCTGCACTGGTTACCTTaGCACGGATTCCATGTTTCACGAAGAATTGTACAGTTAGCATTA | + |
|
Preference number: 6 (lower is better) Translates to: SVSCLWVGTFLHWLP*HGFHVSRRIVQLAL Trigger: TAATGCTAACTGTACAATTCTTCGTGAAACATGGAATCCGTGCAAAGGTAACCAGTGCAGAAAAGTTCCCACCCATAAACAACTGACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005597.9 ENSMUST00000107972.8 |
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