Pregenerated sensors for ZFP655 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007812Ensembl transcript IDs: ENSMUST00000085661.9, ENSMUST00000167316.8, ENSMUST00000196069.5, ENSMUST00000199003.5, ENSMUST00000199322.5, ENSMUST00000200039.5
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGTCTCCTTTGGAGAGTACTCTGGCCAGAACAGAGAAGGCTCATTaGGCTACTCTCCAGAAGCTATGTCAACACTGGCACATTAACAGC | + |
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Preference number: 1 (lower is better) Translates to: ESPLESTLARTEKAH*ATLQKLCQHWHINS Trigger: GCTGTTAATGTGCCAGTGTTGACATAGCTTCTGGAGAGTAGCTCAATGAGCCTTCTCTGTTCTGGCCAGAGTACTCTCCAAAGGAGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR CCA 90 bp | GGTCCTCAGAAAAGAATAGGCCTGAGTCTCCTTTGGAGAGTACTCTaGCCAGAACAGAGAAGGCTCATTGAGCTACTCTCCAGAAGCTAT | + |
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Preference number: 1 (lower is better) Translates to: GPQKRIGLSLLWRVL*PEQRRLIELLSRSY Trigger: ATAGCTTCTGGAGAGTAGCTCAATGAGCCTTCTCTGTTCTGGCCAGAGTACTCTCCAAAGGAGACTCAGGCCTATTCTTTTCTGAGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR TCA 90 bp | CAGTACATATGTGACTTTCCCTGGTCTCAGTTCTCACATATTGAATaGGGCCTGAACTTGACTAAATGTCTCCCCAAGTTCACTGCATTC | + |
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Preference number: 1 (lower is better) Translates to: QYICDFPWSQFSHIE*GLNLTKCLPKFTAF Trigger: GAATGCAGTGAACTTGGGGAGACATTTAGTCAAGTTCAGGCCTCATTCAATATGTGAGAACTGAGACCAGGGAAAGTCACATATGTACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
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| 3UTR TCA 90 bp | TTGATATATGTTGATTTTCTTGTCCTGATGAGACACTACGCTTGCTaGTGGCAAAGAAGTAAAATACAGTGGTGGGACTACCCTAGAGGT | + |
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Preference number: 1 (lower is better) Translates to: LIYVDFLVLMRHYAC*WQRSKIQWWDYPRG Trigger: ACCTCTAGGGTAGTCCCACCACTGTATTTTACTTCTTTGCCATCAGCAAGCGTAGTGTCTCATCAGGACAAGAAAATCAACATATATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR TCA 90 bp | TGCTACTTAGGAATGAATCAAATCCTCTGCCTCAGTCACTGGAAGTaGCTATTGGTCTCTATAAGTAAGAATATACATGTTCGACAGGGA | + |
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Preference number: 1 (lower is better) Translates to: CYLGMNQILCLSHWK*LLVSISKNIHVRQG Trigger: TCCCTGTCGAACATGTATATTCTTACTTATAGAGACCAATAGTCACTTCCAGTGACTGAGGCAGAGGATTTGATTCATTCCTAAGTAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR GCA 90 bp | CAGCCTGGGCAACAAAGACTGCATCCCAACACAAAAGTATGGCAATaGACAAATAATTATGCACAAAGCTTTATGCTTCAAAATACTACC | + |
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Preference number: 1 (lower is better) Translates to: QPGQQRLHPNTKVWQ*TNNYAQSFMLQNTT Trigger: GGTAGTATTTTGAAGCATAAAGCTTTGTGCATAATTATTTGTGCATTGCCATACTTTTGTGTTGGGATGCAGTCTTTGTTGCCCAGGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR GCA 90 bp | ATACTGGATAAGGCCTGGAAAATAGAGTGGTTAAATTTCACCGTTTaGATTATATCAGTCTCATCTGGTGCAGATGTTTTGATCTTAGCA | + |
|
Preference number: 1 (lower is better) Translates to: ILDKAWKIEWLNFTV*IISVSSGADVLILA Trigger: TGCTAAGATCAAAACATCTGCACCAGATGAGACTGATATAATGCAAACGGTGAAATTTAACCACTCTATTTTCCAGGCCTTATCCAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR GCA 90 bp | AGAGTGGTTAAATTTCACCGTTTGCATTATATCAGTCTCATCTGGTaGAGATGTTTTGATCTTAGCATTTGCATAACAATCAGACTCACA | + |
|
Preference number: 1 (lower is better) Translates to: RVVKFHRLHYISLIW*RCFDLSICITIRLT Trigger: TGTGAGTCTGATTGTTATGCAAATGCTAAGATCAAAACATCTGCACCAGATGAGACTGATATAATGCAAACGGTGAAATTTAACCACTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR CCA 90 bp | AATAGAGTGGTTAAATTTCACCGTTTGCATTATATCAGTCTCATCTaGTGCAGATGTTTTGATCTTAGCATTTGCATAACAATCAGACTC | + |
|
Preference number: 1 (lower is better) Translates to: NRVVKFHRLHYISLI*CRCFDLSICITIRL Trigger: GAGTCTGATTGTTATGCAAATGCTAAGATCAAAACATCTGCACCAGATGAGACTGATATAATGCAAACGGTGAAATTTAACCACTCTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR CCA 90 bp | TTAAGGATGCCTAAGAGAACGCAGAAATCAACAGGAAGCCAAGGGTGTGGCTATGGCCTGAGTCTCCTTTaGAGAGTACTCTGGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LRMPKRTQKSTGSQGCGYGLSLL*RVLWPE Trigger: TTCTGGCCAGAGTACTCTCCAAAGGAGACTCAGGCC...ATAGCCACACCCTTGGCTTCCTGTTGATTTCTGCGTTCTCTTAGGCATCCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR CCA 90 bp | TATGCTTCAAAATACTACCCTGGCTTGATGAAGGGAGTGGAGGAGGGAACAGATGGCCTGAGTCTCCTTTaGAGAGTACTCTGGCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: YASKYYPGLMKGVEEGTDGLSLL*RVLWPE Trigger: TTCTGGCCAGAGTACTCTCCAAAGGAGACTCAGGCC...ATCTGTTCCCTCCTCCACTCCCTTCATCAAGCCAGGGTAGTATTTTGAAGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR TCA 90 bp | AATGTTTGGGTGCCTGCCACAAACTCAGGAAGACTGAATCCTCCAAACGTATGGCACTGGGGTATGACTTaGGTTTCCTCACATACACAC | + |
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Preference number: 2 (lower is better) Translates to: NVWVPATNSGRLNPPNVWHWGMT*VSSHTH Trigger: GTGTGTATGTGAGGAAACTCAAGTCATACCCCAGTG...CCATACGTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR GCA 90 bp | ACAAGGCAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACATGTGGCAGAAGTCACTaGCACACACGGTACATTTAC | + |
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Preference number: 2 (lower is better) Translates to: TRQLKTWTSLANVWVPATCGRSH*HTRYIY Trigger: GTAAATGTACCGTGTGTGGCAGTGACTTCTGCCACA...TGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTGCCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
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| 3UTR-3UTR CCA 90 bp | AAATGTTTGGGTGCCTGCCACAAACTCAGGAAGACTGAATCCTCCAAACGTATGACTAAGTATGAGGTGTaGCAGAAGTCACTGCCACAC | + |
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Preference number: 2 (lower is better) Translates to: KCLGACHKLRKTESSKRMTKYEV*QKSLPH Trigger: GTGTGGCAGTGACTTCTGCCACACCTCATACTTAGT...CATACGTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
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| 3UTR-3UTR TCA 90 bp | TATGCTTCAAAATACTACCCTGGCTTGATGAAGGGAGTGGAGGAGGGAACAGATATGCAAAGTAGGCACTaGATGAATGTAGCTAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: YASKYYPGLMKGVEEGTDMQSRH*MNVARP Trigger: TGGCCTAGCTACATTCATTCAGTGCCTACTTTGCAT...ATCTGTTCCCTCCTCCACTCCCTTCATCAAGCCAGGGTAGTATTTTGAAGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGCAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACAATGTTGAAGCACATCTaGGCTCTGGCTACAAGACTT | + |
|
Preference number: 2 (lower is better) Translates to: TRQLKTWTSLANVWVPATMLKHI*ALATRL Trigger: AAGTCTTGTAGCCAGAGCTCAGATGTGCTTCAACAT...TGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTGCCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
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| 3UTR-3UTR GCA 90 bp | TATGCTTCAAAATACTACCCTGGCTTGATGAAGGGAGTGGAGGAGGGAACAGATTTGCAAATGTTTGGGTaGCTGCCACAAACTCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: YASKYYPGLMKGVEEGTDLQMFG*LPQTQE Trigger: TTCCTGAGTTTGTGGCAGGCACCCAAACATTTGCAA...ATCTGTTCCCTCCTCCACTCCCTTCATCAAGCCAGGGTAGTATTTTGAAGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR CCA 90 bp | CAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACAAACTCAAATTCAAGACCAGCCTaGGCAACAAAGACTGCATCC | + |
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Preference number: 2 (lower is better) Translates to: QLKTWTSLANVWVPATNSNSRPA*ATKTAS Trigger: GGATGCAGTCTTTGTTGCCCAGGCTGGTCTTGAATT...TGAGTTTGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR TCA 90 bp | AGACTCTTTCACAGGTTCCACACTTGTAAGACTTGGCTTTGGCATGACCCTTCTCATTCAGTACATATGTaGCTTTCCCTGGTCTCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: RLFHRFHTCKTWLWHDPSHSVHM*LSLVSV Trigger: AACTGAGACCAGGGAAAGTCACATATGTACTGAATG...AGAAGGGTCATGCCAAAGCCAAGTCTTACAAGTGTGGAACCTGTGAAAGAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
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| 3UTR-3UTR GCA 90 bp | AATGTTTGGGTGCCTGCCACAAACTCAGGAAGACTGAATCCTCCAAACGTATGGTCCTGCTCACAGATCTaGCACATTTACTATATCCAA | + |
|
Preference number: 2 (lower is better) Translates to: NVWVPATNSGRLNPPNVWSCSQI*HIYYIQ Trigger: TTGGATATAGTAAATGTGGCAGATCTGTGAGCAGGA...CCATACGTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR GCA 90 bp | TCAGCTGGTGAGAAGCTAACACCAGAACATCATTTAAGGATGCCTAAGAGAACGATGTTGGATGAGGTGTaGTCTCTGACTGAAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SAGEKLTPEHHLRMPKRTMLDEV*SLTEVL Trigger: GAGAACTTCAGTCAGAGAGCACACCTCATCCAACAT...CGTTCTCTTAGGCATCCTTAAATGATGTTCTGGTGTTAGCTTCTCACCAGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
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| 3UTR-3UTR CCA 90 bp | CAGATTCTGCTACTTAGGAATGAATCAAATCCTCTGCCTCAGTCACTGGAAGTGTCACTTGCAAATGTTTaGGTGCCTGCCACAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: QILLLRNESNPLPQSLEVSLANV*VPATNS Trigger: TGAGTTTGTGGCAGGCACCCAAACATTTGCAAGTGA...CACTTCCAGTGACTGAGGCAGAGGATTTGATTCATTCCTAAGTAGCAGAATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR CCA 90 bp | AAATGTTTGGGTGCCTGCCACAAACTCAGGAAGACTGAATCCTCCAAACGTATGCCAACTGCTGGGTTCTaGTTGAAGTTCATGTCATAT | + |
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Preference number: 2 (lower is better) Translates to: KCLGACHKLRKTESSKRMPTAGF*LKFMSY Trigger: ATATGACATGAACTTCAACCAGAACCCAGCAGTTGG...CATACGTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
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| 3UTR-3UTR TCA 90 bp | AGGATGTTAAAACAGTTGCTAAGGATGTGCTGGCTCAGTCACAAAAGCAAGCTGAGTGTGGTTTATGAATaGACGGAGTTCCAAATGCAC | + |
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Preference number: 2 (lower is better) Translates to: RMLKQLLRMCWLSHKSKLSVVYE*TEFQMH Trigger: GTGCATTTGGAACTCCGTTCATTCATAAACCACACT...CAGCTTGCTTTTGTGACTGAGCCAGCACATCCTTAGCAACTGTTTTAACATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200039.5 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGGAGGAGGGAACAGATAAAGAAGCAATCCTAATGATTAAGGTTTTACCAATGAGGTGTGCTCTCTaGCTGAAGTTCTCTTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: GVEEGTDKEAILMIKVLPMRCAL*LKFSSH Trigger: ATGGGAAGAGAACTTCAGTCAGAGAGCACACCTCAT...TGGTAAAACCTTAATCATTAGGATTGCTTCTTTATCTGTTCCCTCCTCCACTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
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| 3UTR-3UTR GCA 90 bp | TATGCTTCAAAATACTACCCTGGCTTGATGAAGGGAGTGGAGGAGGGAACAGATTCCTGCTCACAGATCTaGCACATTTACTATATCCAA | + |
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Preference number: 2 (lower is better) Translates to: YASKYYPGLMKGVEEGTDSCSQI*HIYYIQ Trigger: TTGGATATAGTAAATGTGGCAGATCTGTGAGCAGGA...ATCTGTTCCCTCCTCCACTCCCTTCATCAAGCCAGGGTAGTATTTTGAAGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR GCA 90 bp | AGACTCTTTCACAGGTTCCACACTTGTAAGACTTGGCTTTGGCATGACCCTTCTATCAGTCTCATCTGGTaGAGATGTTTTGATCTTAGC | + |
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Preference number: 2 (lower is better) Translates to: RLFHRFHTCKTWLWHDPSISLIW*RCFDLS Trigger: GCTAAGATCAAAACATCTGCACCAGATGAGACTGAT...AGAAGGGTCATGCCAAAGCCAAGTCTTACAAGTGTGGAACCTGTGAAAGAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
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| 3UTR-3UTR GCA 90 bp | CAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACAAACTCACTGGGCAACAAAGACTaGATCCCAACACAAAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: QLKTWTSLANVWVPATNSLGNKD*IPTQKY Trigger: ATACTTTTGTGTTGGGATGCAGTCTTTGTTGCCCAG...TGAGTTTGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGGAGGAGGGAACAGATAAAGAAGCAATCCTAATGATTAAGGTTTTACCACTCATTAGAGGGCTGTaGATGCAAACAAGGCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: GVEEGTDKEAILMIKVLPLIRGL*MQTRQL Trigger: TAGCTGCCTTGTTTGCATCCACAGCCCTCTAATGAG...TGGTAAAACCTTAATCATTAGGATTGCTTCTTTATCTGTTCCCTCCTCCACTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR CCA 90 bp | CAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACAAACTCAAGAAGTAAAATACAGTaGTGGGACTACCCTAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: QLKTWTSLANVWVPATNSRSKIQ*WDYPRG Trigger: ACCTCTAGGGTAGTCCCACCACTGTATTTTACTTCT...TGAGTTTGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTGGTGAGAAGCTAACACCAGAACATCATTTAAGGATGCCTAAGAGAACGGGAATAAGCTATGACTaGAGACATCATAGCATTCAG | + |
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Preference number: 2 (lower is better) Translates to: SAGEKLTPEHHLRMPKRTGISYD*RHHSIQ Trigger: CTGAATGCTATGATGTCTTCAGTCATAGCTTATTCC...CGTTCTCTTAGGCATCCTTAAATGATGTTCTGGTGTTAGCTTCTCACCAGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR TCA 90 bp | TTAAGGATGCCTAAGAGAACGCAGAAATCAACAGGAAGCCAAGGGTGTGGCTATCATTTTCTAATACTTTaGTACTGGATAAGGCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LRMPKRTQKSTGSQGCGYHFLIL*YWIRPG Trigger: TCCAGGCCTTATCCAGTATCAAAGTATTAGAAAATG...ATAGCCACACCCTTGGCTTCCTGTTGATTTCTGCGTTCTCTTAGGCATCCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR TCA 90 bp | TATGCTTCAAAATACTACCCTGGCTTGATGAAGGGAGTGGAGGAGGGAACAGATCATTTTCTAATACTTTaGTACTGGATAAGGCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: YASKYYPGLMKGVEEGTDHFLIL*YWIRPG Trigger: TCCAGGCCTTATCCAGTATCAAAGTATTAGAAAATG...ATCTGTTCCCTCCTCCACTCCCTTCATCAAGCCAGGGTAGTATTTTGAAGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACAAACTCAAGACACTACGCTTGCTaGTGGCAAAGAAGTAAAATA | + |
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Preference number: 2 (lower is better) Translates to: QLKTWTSLANVWVPATNSRHYAC*WQRSKI Trigger: TATTTTACTTCTTTGCCATCAGCAAGCGTAGTGTCT...TGAGTTTGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR TCA 90 bp | TATGCTTCAAAATACTACCCTGGCTTGATGAAGGGAGTGGAGGAGGGAACAGATCTGGTTTCAGGAACTTaGGCAATATCTTGTTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: YASKYYPGLMKGVEEGTDLVSGT*AISCLN Trigger: ATTCAAACAAGATATTGCTCAAGTTCCTGAAACCAG...ATCTGTTCCCTCCTCCACTCCCTTCATCAAGCCAGGGTAGTATTTTGAAGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
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| 3UTR-3UTR GCA 90 bp | CAGATTCTGCTACTTAGGAATGAATCAAATCCTCTGCCTCAGTCACTGGAAGTGATCAGTCTCATCTGGTaGAGATGTTTTGATCTTAGC | + |
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Preference number: 2 (lower is better) Translates to: QILLLRNESNPLPQSLEVISLIW*RCFDLS Trigger: GCTAAGATCAAAACATCTGCACCAGATGAGACTGAT...CACTTCCAGTGACTGAGGCAGAGGATTTGATTCATTCCTAAGTAGCAGAATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR GCA 90 bp | GGAGTGGAGGAGGGAACAGATAAAGAAGCAATCCTAATGATTAAGGTTTTACCAAAATGTTTGGGTGCCTaGCACAAACTCAGGAAGACT | + |
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Preference number: 2 (lower is better) Translates to: GVEEGTDKEAILMIKVLPKCLGA*HKLRKT Trigger: AGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATTT...TGGTAAAACCTTAATCATTAGGATTGCTTCTTTATCTGTTCCCTCCTCCACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR CCA 90 bp | TATGCTTCAAAATACTACCCTGGCTTGATGAAGGGAGTGGAGGAGGGAACAGATAATCAGACTCACATCTaGTACATTCTGATGACAGAT | + |
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Preference number: 2 (lower is better) Translates to: YASKYYPGLMKGVEEGTDNQTHI*YILMTD Trigger: ATCTGTCATCAGAATGTACCAGATGTGAGTCTGATT...ATCTGTTCCCTCCTCCACTCCCTTCATCAAGCCAGGGTAGTATTTTGAAGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGGAGGAGGGAACAGATAAAGAAGCAATCCTAATGATTAAGGTTTTACCATCACTTGCAAATGTTTaGGTGCCTGCCACAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: GVEEGTDKEAILMIKVLPSLANV*VPATNS Trigger: TGAGTTTGTGGCAGGCACCCAAACATTTGCAAGTGA...TGGTAAAACCTTAATCATTAGGATTGCTTCTTTATCTGTTCCCTCCTCCACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR CCA 90 bp | TATGCTTCAAAATACTACCCTGGCTTGATGAAGGGAGTGGAGGAGGGAACAGATACTTATAAACCTCTCTaGTTTCAGGAACTTGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: YASKYYPGLMKGVEEGTDTYKPL*FQELEQ Trigger: TTGCTCAAGTTCCTGAAACCAGAGAGGTTTATAAGT...ATCTGTTCCCTCCTCCACTCCCTTCATCAAGCCAGGGTAGTATTTTGAAGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGGAGGAGGGAACAGATAAAGAAGCAATCCTAATGATTAAGGTTTTACCACATTCAGTACATATGTaGCTTTCCCTGGTCTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: GVEEGTDKEAILMIKVLPHSVHM*LSLVSV Trigger: AACTGAGACCAGGGAAAGTCACATATGTACTGAATG...TGGTAAAACCTTAATCATTAGGATTGCTTCTTTATCTGTTCCCTCCTCCACTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR TCA 90 bp | CAGATTCTGCTACTTAGGAATGAATCAAATCCTCTGCCTCAGTCACTGGAAGTGGATACTGTGAGAAAATaGCTTCGTTTCCCAATTATC | + |
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Preference number: 2 (lower is better) Translates to: QILLLRNESNPLPQSLEVDTVRK*LRFPII Trigger: GATAATTGGGAAACGAAGTCATTTTCTCACAGTATC...CACTTCCAGTGACTGAGGCAGAGGATTTGATTCATTCCTAAGTAGCAGAATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTGGTGAGAAGCTAACACCAGAACATCATTTAAGGATGCCTAAGAGAACGTTCTCACATATTGAATaGGGCCTGAACTTGACTAAA | + |
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Preference number: 2 (lower is better) Translates to: SAGEKLTPEHHLRMPKRTFSHIE*GLNLTK Trigger: TTTAGTCAAGTTCAGGCCTCATTCAATATGTGAGAA...CGTTCTCTTAGGCATCCTTAAATGATGTTCTGGTGTTAGCTTCTCACCAGCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
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| 3UTR-3UTR GCA 90 bp | CAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACAAACTCAATGCACAAAGCTTTATaGTTCAAAATACTACCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: QLKTWTSLANVWVPATNSMHKAL*FKILPW Trigger: CCAGGGTAGTATTTTGAAGCATAAAGCTTTGTGCAT...TGAGTTTGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR-3UTR CCA 90 bp | AAATGTTTGGGTGCCTGCCACAAACTCAGGAAGACTGAATCCTCCAAACGTATGTATATCAGTCTCATCTaGTGCAGATGTTTTGATCTT | + |
|
Preference number: 2 (lower is better) Translates to: KCLGACHKLRKTESSKRMYISLI*CRCFDL Trigger: AAGATCAAAACATCTGCACCAGATGAGACTGATATA...CATACGTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGGCAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACATATATCAGTCTCATCTaGTGCAGATGTTTTGATCTT | + |
|
Preference number: 2 (lower is better) Translates to: TRQLKTWTSLANVWVPATYISLI*CRCFDL Trigger: AAGATCAAAACATCTGCACCAGATGAGACTGATATA...TGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTGCCTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR-3UTR CCA 90 bp | TATGCTTCAAAATACTACCCTGGCTTGATGAAGGGAGTGGAGGAGGGAACAGATATACTGGATAAGGCCTaGAAAATAGAGTGGTTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: YASKYYPGLMKGVEEGTDILDKA*KIEWLN Trigger: ATTTAACCACTCTATTTTCCAGGCCTTATCCAGTAT...ATCTGTTCCCTCCTCCACTCCCTTCATCAAGCCAGGGTAGTATTTTGAAGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR-3UTR CCA 90 bp | AAATGTTTGGGTGCCTGCCACAAACTCAGGAAGACTGAATCCTCCAAACGTATGTTCCCAATTATCTTCTaGATTCAGTTATTCAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: KCLGACHKLRKTESSKRMFPIIF*IQLFSS Trigger: ACTGCTGAATAACTGAATCCAGAAGATAATTGGGAA...CATACGTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR-3UTR CCA 90 bp | TGCCTAGTGCAAACATTTAATCAAGGGACTACTCTTTTGGTGCCTGTGATAAATGCTGACCACCAAGTGTaGTTTATGAATGAACGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: CLVQTFNQGTTLLVPVINADHQV*FMNERS Trigger: ACTCCGTTCATTCATAAACCACACTTGGTGGTCAGC...ATTTATCACAGGCACCAAAAGAGTAGTCCCTTGATTAAATGTTTGCACTAGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200039.5 |
||
| 3UTR-3UTR TCA 90 bp | GGAGTGGAGGAGGGAACAGATAAAGAAGCAATCCTAATGATTAAGGTTTTACCAGGAATAAGCTATGACTaGAGACATCATAGCATTCAG | + |
|
Preference number: 2 (lower is better) Translates to: GVEEGTDKEAILMIKVLPGISYD*RHHSIQ Trigger: CTGAATGCTATGATGTCTTCAGTCATAGCTTATTCC...TGGTAAAACCTTAATCATTAGGATTGCTTCTTTATCTGTTCCCTCCTCCACTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR-3UTR TCA 90 bp | GGAGTGGAGGAGGGAACAGATAAAGAAGCAATCCTAATGATTAAGGTTTTACCAGATACTGTGAGAAAATaGCTTCGTTTCCCAATTATC | + |
|
Preference number: 2 (lower is better) Translates to: GVEEGTDKEAILMIKVLPDTVRK*LRFPII Trigger: GATAATTGGGAAACGAAGTCATTTTCTCACAGTATC...TGGTAAAACCTTAATCATTAGGATTGCTTCTTTATCTGTTCCCTCCTCCACTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTGGAGGAGGGAACAGATAAAGAAGCAATCCTAATGATTAAGGTTTTACCAAATCAGACTCACATCTaGTACATTCTGATGACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: GVEEGTDKEAILMIKVLPNQTHI*YILMTD Trigger: ATCTGTCATCAGAATGTACCAGATGTGAGTCTGATT...TGGTAAAACCTTAATCATTAGGATTGCTTCTTTATCTGTTCCCTCCTCCACTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAAGGTAATATAAATACAGCAATTGGTTTGGTACCACAACAAATCAGGTACGCTGACCACCAAGTGTaGTTTATGAATGAACGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: RKGNINTAIGLVPQQIRYADHQV*FMNERS Trigger: ACTCCGTTCATTCATAAACCACACTTGGTGGTCAGC...GTACCTGATTTGTTGTGGTACCAAACCAATTGCTGTATTTATATTACCTTTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196069.5 ENSMUST00000200039.5 |
||
| 3UTR-3UTR TCA 90 bp | AGATGTTTTGATCTTAGCATTTGCATAACAATCAGACTCACATCTGGTACATTCCTGCTGGGTTCTGGTTaGAGTTCATGTCATATTTAC | + |
|
Preference number: 2 (lower is better) Translates to: RCFDLSICITIRLTSGTFLLGSG*SSCHIY Trigger: GTAAATATGACATGAACTTCAACCAGAACCCAGCAG...GAATGTACCAGATGTGAGTCTGATTGTTATGCAAATGCTAAGATCAAAACATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
||
| 3UTR TCA 72 bp | TTGGAGAGTACTCTGGCCAGAACAGAGAAGGCTCATTaGGCTACTCTCCAGAAGCTATGTCAACACTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LESTLARTEKAH*ATLQKLCQHWH Trigger: GTGCCAGTGTTGACATAGCTTCTGGAGAGTAGCTCAATGAGCCTTCTCTGTTCTGGCCAGAGTACTCTCCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR TCA 72 bp | AATGTAGCTAGGCCAACAGGAGTCTTACTGGCTCCCTaGTGTCCTTGTCATCTCATTAGAGGGCTGTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: NVARPTGVLLAP*CPCHLIRGLWM Trigger: CATCCACAGCCCTCTAATGAGATGACAAGGACATCAGGGAGCCAGTAAGACTCCTGTTGGCCTAGCTACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR TCA 72 bp | CAAATGTTTGGGTGCCTGCCACAAACTCAGGAAGACTaGATCCTCCAAACGTATGGATGGCTGATGTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QMFGCLPQTQED*ILQTYGWLMWK Trigger: CTTCCACATCAGCCATCCATACGTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR CCA 72 bp | AAAAGAATAGGCCTGAGTCTCCTTTGGAGAGTACTCTaGCCAGAACAGAGAAGGCTCATTGAGCTACTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KRIGLSLLWRVL*PEQRRLIELLS Trigger: GGAGAGTAGCTCAATGAGCCTTCTCTGTTCTGGCCAGAGTACTCTCCAAAGGAGACTCAGGCCTATTCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR-3UTR CAA 90 bp | TATGCTTCAAAATACTACCCTGGCTTGATGAAGGGAGTGGAGGAGGGAACAGATAACAGAGAAGGCTCATaGAGCTACTCTCCAGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: YASKYYPGLMKGVEEGTDNREGS*SYSPEA Trigger: AGCTTCTGGAGAGTAGCTCAATGAGCCTTCTCTGTT...ATCTGTTCCCTCCTCCACTCCCTTCATCAAGCCAGGGTAGTATTTTGAAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGATTCTGCTACTTAGGAATGAATCAAATCCTCTGCCTCAGTCACTGGAAGTGGCAGACCTGAGCATTTaGTTGGCCTTCAATATAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QILLLRNESNPLPQSLEVADLSI*LAFNIG Trigger: GCCTATATTGAAGGCCAACAAAATGCTCAGGTCTGC...CACTTCCAGTGACTGAGGCAGAGGATTTGATTCATTCCTAAGTAGCAGAATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR CCA 72 bp | TTCCCAAGGATGTTAAAACAGTTGCTAAGGATGTGCTaGCTCAGTCACAAAAGCAAGCTGGGTAGTGTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FPRMLKQLLRMC*LSHKSKLGSVG Trigger: TCCTACACTACCCAGCTTGCTTTTGTGACTGAGCCAGCACATCCTTAGCAACTGTTTTAACATCCTTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200039.5 |
||
| 3UTR-3UTR CAA 90 bp | TATGCTTCAAAATACTACCCTGGCTTGATGAAGGGAGTGGAGGAGGGAACAGATTCTAATGGGAACTTCTaGTTGCAGAGTAAGATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: YASKYYPGLMKGVEEGTDSNGNF*LQSKIR Trigger: TCTGATCTTACTCTGCAACAAGAAGTTCCCATTAGA...ATCTGTTCCCTCCTCCACTCCCTTCATCAAGCCAGGGTAGTATTTTGAAGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
||
| 3UTR CCA 72 bp | CAATCAGACTCACATCTGGTACATTCTGATGACAGATaGACTCCTGCTCACAGATCTGCCACATTTACTATA | + |
|
Preference number: 3 (lower is better) Translates to: QSDSHLVHSDDR*TPAHRSATFTI Trigger: TATAGTAAATGTGGCAGATCTGTGAGCAGGAGTCCATCTGTCATCAGAATGTACCAGATGTGAGTCTGATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGGATGCCTAAGAGAACGCAGAAATCAACAGGAAGCCAAGGGTGTGGCTATATGGCTTTTTCACATTaGACAGTGGAATTTTACTCC | + |
|
Preference number: 3 (lower is better) Translates to: LRMPKRTQKSTGSQGCGYMAFSH*TVEFYS Trigger: GGAGTAAAATTCCACTGTCAAATGTGAAAAAGCCAT...ATAGCCACACCCTTGGCTTCCTGTTGATTTCTGCGTTCTCTTAGGCATCCTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTGGAGGAGGGAACAGATAAAGAAGCAATCCTAATGATTAAGGTTTTACCAAAACTTGGACATCACTaGCAAATGTTTGGGTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GVEEGTDKEAILMIKVLPKLGHH*QMFGCL Trigger: CAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTT...TGGTAAAACCTTAATCATTAGGATTGCTTCTTTATCTGTTCCCTCCTCCACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR-3UTR CAA 90 bp | GACCCTTCTTATGTTGAAGCACATCTGAGCTCTGGCTACAAGACTTATCAGGTGCTGCTGAAAGTCTTCTaGCTGATTGTTATTTGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: DPSYVEAHLSSGYKTYQVLLKVF*LIVICL Trigger: TAGACAAATAACAATCAGCAAGAAGACTTTCAGCAG...CACCTGATAAGTCTTGTAGCCAGAGCTCAGATGTGCTTCAACATAAGAAGGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACAAACTCAACTGCTGGGTTCTGGTaGAAGTTCATGTCATATTTA | + |
|
Preference number: 3 (lower is better) Translates to: QLKTWTSLANVWVPATNSTAGFW*KFMSYL Trigger: TAAATATGACATGAACTTCAACCAGAACCCAGCAGT...TGAGTTTGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
||
| 3UTR-3UTR CAA 90 bp | AAATGTTTGGGTGCCTGCCACAAACTCAGGAAGACTGAATCCTCCAAACGTATGTCTCTGTTAGATTTATaGGTTCTTGTTCACCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: KCLGACHKLRKTESSKRMSLLDL*VLVHQL Trigger: CAGTTGGTGAACAAGAACCAATAAATCTAACAGAGA...CATACGTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
||
| 3UTR GCA 72 bp | CAAACCCAAATGCATACGTGGGGTTTTTACAGATTCTaGTACTTAGGAATGAATCAAATCCTCTGCCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: QTQMHTWGFYRF*YLGMNQILCLS Trigger: ACTGAGGCAGAGGATTTGATTCATTCCTAAGTAGCAGAATCTGTAAAAACCCCACGTATGCATTTGGGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGATTCTGCTACTTAGGAATGAATCAAATCCTCTGCCTCAGTCACTGGAAGTGATGGCTTTTTCACATTaGACAGTGGAATTTTACTCC | + |
|
Preference number: 3 (lower is better) Translates to: QILLLRNESNPLPQSLEVMAFSH*TVEFYS Trigger: GGAGTAAAATTCCACTGTCAAATGTGAAAAAGCCAT...CACTTCCAGTGACTGAGGCAGAGGATTTGATTCATTCCTAAGTAGCAGAATCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR TCA 72 bp | CAATTCTCTGATGCCGACCACGGAATAAGCTATGACTaGAGACATCATAGCATTCAGTACATATGTGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: QFSDADHGISYD*RHHSIQYICDF Trigger: AAAGTCACATATGTACTGAATGCTATGATGTCTTCAGTCATAGCTTATTCCGTGGTCGGCATCAGAGAATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR TCA 72 bp | TTATTGGTTCTTGTTCACCAACTGCTGGGTTCTGGTTaGAGTTCATGTCATATTTACTGTCATCAGTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLVLVHQLLGSG*SSCHIYCHQWS Trigger: AGACCACTGATGACAGTAAATATGACATGAACTTCAACCAGAACCCAGCAGTTGGTGAACAAGAACCAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
||
| 3UTR CCA 72 bp | AAGTACAAAAGCACGTTCCAAACCCAAATGCATACGTaGGGTTTTTACAGATTCTGCTACTTAGGAATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KYKSTFQTQMHT*GFYRFCYLGMN Trigger: ATTCATTCCTAAGTAGCAGAATCTGTAAAAACCCCACGTATGCATTTGGGTTTGGAACGTGCTTTTGTACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR CCA 72 bp | AGATTTATTGGTTCTTGTTCACCAACTGCTGGGTTCTaGTTGAAGTTCATGTCATATTTACTGTCATCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RFIGSCSPTAGF*LKFMSYLLSSV Trigger: CACTGATGACAGTAAATATGACATGAACTTCAACCAGAACCCAGCAGTTGGTGAACAAGAACCAATAAATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
||
| 3UTR GCA 72 bp | CAACAAAGACTGCATCCCAACACAAAAGTATGGCAATaGACAAATAATTATGCACAAAGCTTTATGCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QQRLHPNTKVWQ*TNNYAQSFMLQ Trigger: TTGAAGCATAAAGCTTTGTGCATAATTATTTGTGCATTGCCATACTTTTGTGTTGGGATGCAGTCTTTGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR TCA 72 bp | AAGATTTACAGTGAGCAGCATATTTTATATACTGGTTaGGGATCCCTAGTGAACATTATGACATCTGAACTA | + |
|
Preference number: 3 (lower is better) Translates to: KIYSEQHILYTG*GSLVNIMTSEL Trigger: TAGTTCAGATGTCATAATGTTCACTAGGGATCCTCAACCAGTATATAAAATATGCTGCTCACTGTAAATCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR TCA 72 bp | TTTCAAATGAAGTATGGTGGACCCACAAAGATAAAATaGATTCCCAAGGATGTTAAAACAGTTGCTAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: FQMKYGGPTKIK*IPKDVKTVAKD Trigger: ATCCTTAGCAACTGTTTTAACATCCTTGGGAATTCATTTTATCTTTGTGGGTCCACCATACTTCATTTGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200039.5 |
||
| 3UTR GCA 72 bp | AAATTTCACCGTTTGCATTATATCAGTCTCATCTGGTaGAGATGTTTTGATCTTAGCATTTGCATAACAATC | + |
|
Preference number: 3 (lower is better) Translates to: KFHRLHYISLIW*RCFDLSICITI Trigger: GATTGTTATGCAAATGCTAAGATCAAAACATCTGCACCAGATGAGACTGATATAATGCAAACGGTGAAATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR CCA 72 bp | GTTAAATTTCACCGTTTGCATTATATCAGTCTCATCTaGTGCAGATGTTTTGATCTTAGCATTTGCATAACA | + |
|
Preference number: 3 (lower is better) Translates to: VKFHRLHYISLI*CRCFDLSICIT Trigger: TGTTATGCAAATGCTAAGATCAAAACATCTGCACCAGATGAGACTGATATAATGCAAACGGTGAAATTTAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| 3UTR CCA 72 bp | AATACTTTGATACTGGATAAGGCCTGGAAAATAGAGTaGTTAAATTTCACCGTTTGCATTATATCAGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: NTLILDKAWKIE*LNFTVCIISVS Trigger: TGAGACTGATATAATGCAAACGGTGAAATTTAACCACTCTATTTTCCAGGCCTTATCCAGTATCAAAGTATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| CDS-3UTR CCA 90 bp | GGGATGAGCACTCCCGATGGAAAGCCGATCCCTGGGCCATCTCTTGGTGATTCCGCTGGAAGTGGCCCCTaGGTGACTCTGCGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GMSTPDGKPIPGPSLGDSAGSGP*VTLRLL Trigger: AAGAAGCCGCAGAGTCACCCAGGGGCCACTTCCAGC...GGAATCACCAAGAGATGGCCCAGGGATCGGCTTTCCATCGGGAGTGCTCATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196069.5 |
||
| CDS-3UTR CCA 90 bp | GGGATGAGCACTCCCGATGGAAAGCCGATCCCTGGGCCATCTCTTGGTGATTCCCACAATGAATCCGGGTaGTGGGAAGGCGGAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GMSTPDGKPIPGPSLGDSHNESG*WEGGEV Trigger: TACTTCTCCGCCTTCCCACCACCCGGATTCATTGTG...GGAATCACCAAGAGATGGCCCAGGGATCGGCTTTCCATCGGGAGTGCTCATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196069.5 |
||
| CDS-3UTR TCA 90 bp | AATGTTTGGGTGCCTGCCACAAACTCAGGAAGACTGAATCCTCCAAACGTATGGCAGGTGGAGCCCCACTaGATCCCTGCTCCATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NVWVPATNSGRLNPPNVWQVEPH*IPAPCP Trigger: CGGACATGGAGCAGGGATTCAGTGGGGCTCCACCTG...CCATACGTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
||
| CDS-3UTR TCA 90 bp | TATGCTTCAAAATACTACCCTGGCTTGATGAAGGGAGTGGAGGAGGGAACAGATGAAGTGGCCCCTGGGTaGCTCTGCGGCTTCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YASKYYPGLMKGVEEGTDEVAPG*LCGFLG Trigger: TCCCAAGAAGCCGCAGAGTCACCCAGGGGCCACTTC...ATCTGTTCCCTCCTCCACTCCCTTCATCAAGCCAGGGTAGTATTTTGAAGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGCTTCCATGTTAGAGATTCACCAAATGTCACTTAGGGAGGGAGCAGCAGCTGGAAGTGGCCCCTaGGTGACTCTGCGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKASMLEIHQMSLREGAAAGSGP*VTLRLL Trigger: AAGAAGCCGCAGAGTCACCCAGGGGCCACTTCCAGC...TGCTGCTCCCTCCCTAAGTGACATTTGGTGAATCTCTAACATGGAAGCCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000196069.5 ENSMUST00000199003.5 ENSMUST00000200039.5 |
||
| CDS-3UTR CCA 90 bp | GGGATGAGCACTCCCGATGGAAAGCCGATCCCTGGGCCATCTCTTGGTGATTCCGAAAGACATTCAGACTaGTTCTCCAAAGGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GMSTPDGKPIPGPSLGDSERHSD*FSKGWK Trigger: CTTCCAGCCTTTGGAGAACCAGTCTGAATGTCTTTC...GGAATCACCAAGAGATGGCCCAGGGATCGGCTTTCCATCGGGAGTGCTCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196069.5 |
||
| CDS-3UTR TCA 90 bp | TCAGCTGGTGAGAAGCTAACACCAGAACATCATTTAAGGATGCCTAAGAGAACGGAAGTGGCCCCTGGGTaGCTCTGCGGCTTCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SAGEKLTPEHHLRMPKRTEVAPG*LCGFLG Trigger: TCCCAAGAAGCCGCAGAGTCACCCAGGGGCCACTTC...CGTTCTCTTAGGCATCCTTAAATGATGTTCTGGTGTTAGCTTCTCACCAGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| CDS-3UTR TCA 90 bp | GCTTCCATGTTAGAGATTCACCAAATGTCACTTAGGGAGGGAGCAGCAACTTTAGAAGTGGCCCCTGGGTaGCTCTGCGGCTTCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASMLEIHQMSLREGAATLEVAPG*LCGFLG Trigger: TCCCAAGAAGCCGCAGAGTCACCCAGGGGCCACTTC...TAAAGTTGCTGCTCCCTCCCTAAGTGACATTTGGTGAATCTCTAACATGGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000196069.5 ENSMUST00000199003.5 ENSMUST00000200039.5 |
||
| CDS-3UTR GCA 90 bp | ACAAGGCAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACACCCCCACTGAATCCCTaGTCCATGTCCGTGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TRQLKTWTSLANVWVPATPPLNP*SMSVSC Trigger: GCAGGACACGGACATGGAGCAGGGATTCAGTGGGGG...TGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTGCCTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
||
| CDS-3UTR GCA 90 bp | AAATGTTTGGGTGCCTGCCACAAACTCAGGAAGACTGAATCCTCCAAACGTATGGCCCCACTGAATCCCTaGTCCATGTCCGTGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KCLGACHKLRKTESSKRMAPLNP*SMSVSC Trigger: GCAGGACACGGACATGGAGCAGGGATTCAGTGGGGC...CATACGTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
||
| CDS-3UTR GCA 90 bp | TTCACCAAATGTCACTTAGGGAGGGAGCAGCAACTTTACATAATGGTGGCATCCGCCCCACTGAATCCCTaGTCCATGTCCGTGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTKCHLGREQQLYIMVASAPLNP*SMSVSC Trigger: GCAGGACACGGACATGGAGCAGGGATTCAGTGGGGC...GGATGCCACCATTATGTAAAGTTGCTGCTCCCTCCCTAAGTGACATTTGGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196069.5 ENSMUST00000200039.5 |
||
| CDS-3UTR CCA 90 bp | TATGCTTCAAAATACTACCCTGGCTTGATGAAGGGAGTGGAGGAGGGAACAGATGCTGGAAGTGGCCCCTaGGTGACTCTGCGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YASKYYPGLMKGVEEGTDAGSGP*VTLRLL Trigger: AAGAAGCCGCAGAGTCACCCAGGGGCCACTTCCAGC...ATCTGTTCCCTCCTCCACTCCCTTCATCAAGCCAGGGTAGTATTTTGAAGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| CDS-3UTR TCA 90 bp | TCCATGTTAGAGATTCACCAAATGTCACTTAGGGAGGGAGCAGCAACTTTACATGAAGTGGCCCCTGGGTaGCTCTGCGGCTTCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SMLEIHQMSLREGAATLHEVAPG*LCGFLG Trigger: TCCCAAGAAGCCGCAGAGTCACCCAGGGGCCACTTC...ATGTAAAGTTGCTGCTCCCTCCCTAAGTGACATTTGGTGAATCTCTAACATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000196069.5 ENSMUST00000199003.5 ENSMUST00000200039.5 |
||
| CDS-3UTR TCA 90 bp | ATCATAAGGAAGGCTTCCATGTTAGAGATTCACCAAATGTCACTTAGGGAGGGACAGGTGGAGCCCCACTaGATCCCTGCTCCATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IIRKASMLEIHQMSLREGQVEPH*IPAPCP Trigger: CGGACATGGAGCAGGGATTCAGTGGGGCTCCACCTG...TCCCTCCCTAAGTGACATTTGGTGAATCTCTAACATGGAAGCCTTCCTTATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196069.5 ENSMUST00000200039.5 |
||
| CDS-3UTR CCA 90 bp | CAGATTCTGCTACTTAGGAATGAATCAAATCCTCTGCCTCAGTCACTGGAAGTGTCCAAAGGCTGGAAGTaGCCCCTGGGTGACTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QILLLRNESNPLPQSLEVSKGWK*PLGDSA Trigger: CGCAGAGTCACCCAGGGGCCACTTCCAGCCTTTGGA...CACTTCCAGTGACTGAGGCAGAGGATTTGATTCATTCCTAAGTAGCAGAATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| CDS-3UTR TCA 90 bp | AATGCACGTGATCATAAGGAAGGCTTCCATGTTAGAGATTCACCAAATGTCACTCAGGTGGAGCCCCACTaGATCCCTGCTCCATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NARDHKEGFHVRDSPNVTQVEPH*IPAPCP Trigger: CGGACATGGAGCAGGGATTCAGTGGGGCTCCACCTG...AGTGACATTTGGTGAATCTCTAACATGGAAGCCTTCCTTATGATCACGTGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196069.5 ENSMUST00000200039.5 |
||
| CDS-3UTR GCA 90 bp | TCCATGTTAGAGATTCACCAAATGTCACTTAGGGAGGGAGCAGCAACTTTACATCCCCCACTGAATCCCTaGTCCATGTCCGTGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SMLEIHQMSLREGAATLHPPLNP*SMSVSC Trigger: GCAGGACACGGACATGGAGCAGGGATTCAGTGGGGG...ATGTAAAGTTGCTGCTCCCTCCCTAAGTGACATTTGGTGAATCTCTAACATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199003.5 |
||
| CDS-3UTR GCA 90 bp | TTCACCAAATGTCACTTAGGGAGGGAGCAGCAACTTTACATAATGGTGGCATCCGAAGGCGGAGAAGTATaGCTGGTACCTGGCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTKCHLGREQQLYIMVASEGGEV*LVPGCQ Trigger: CTGACAGCCAGGTACCAGGCATACTTCTCCGCCTTC...GGATGCCACCATTATGTAAAGTTGCTGCTCCCTCCCTAAGTGACATTTGGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196069.5 |
||
| CDS-3UTR CCA 90 bp | CACGTGATCATAAGGAAGGCTTCCATGTTAGAGATTCACCAAATGTCACTTAGGGCTGGAAGTGGCCCCTaGGTGACTCTGCGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HVIIRKASMLEIHQMSLRAGSGP*VTLRLL Trigger: AAGAAGCCGCAGAGTCACCCAGGGGCCACTTCCAGC...CCTAAGTGACATTTGGTGAATCTCTAACATGGAAGCCTTCCTTATGATCACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000196069.5 ENSMUST00000199003.5 ENSMUST00000200039.5 |
||
| 3UTR CAA 72 bp | GTAGGGTCCTCAGAAAAGAATAGGCCTGAGTCTCCTTaGGAGAGTACTCTGGCCAGAACAGAGAAGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGSSEKNRPESP*ESTLARTEKAH Trigger: ATGAGCCTTCTCTGTTCTGGCCAGAGTACTCTCCAAAGGAGACTCAGGCCTATTCTTTTCTGAGGACCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| CDS-3UTR CCA 90 bp | TTCACCAAATGTCACTTAGGGAGGGAGCAGCAACTTTACATAATGGTGGCATCCAATGAATCCGGGTGGTaGGAAGGCGGAGAAGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: FTKCHLGREQQLYIMVASNESGW*EGGEVC Trigger: GCATACTTCTCCGCCTTCCCACCACCCGGATTCATT...GGATGCCACCATTATGTAAAGTTGCTGCTCCCTCCCTAAGTGACATTTGGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000196069.5 ENSMUST00000199003.5 ENSMUST00000200039.5 |
||
| CDS-3UTR CCA 90 bp | TTCACCAAATGTCACTTAGGGAGGGAGCAGCAACTTTACATAATGGTGGCATCCCACAATGAATCCGGGTaGTGGGAAGGCGGAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FTKCHLGREQQLYIMVASHNESG*WEGGEV Trigger: TACTTCTCCGCCTTCCCACCACCCGGATTCATTGTG...GGATGCCACCATTATGTAAAGTTGCTGCTCCCTCCCTAAGTGACATTTGGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000196069.5 ENSMUST00000199003.5 ENSMUST00000200039.5 |
||
| CDS-3UTR CCA 90 bp | CACGTGATCATAAGGAAGGCTTCCATGTTAGAGATTCACCAAATGTCACTTAGGGCGGAGAAGTATGCCTaGTACCTGGCTGTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVIIRKASMLEIHQMSLRAEKYA*YLAVRS Trigger: GCTCCTGACAGCCAGGTACCAGGCATACTTCTCCGC...CCTAAGTGACATTTGGTGAATCTCTAACATGGAAGCCTTCCTTATGATCACGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196069.5 |
||
| CDS-3UTR GCA 90 bp | ATGTTAGAGATTCACCAAATGTCACTTAGGGAGGGAGCAGCAACTTTACATAATGCCCCACTGAATCCCTaGTCCATGTCCGTGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MLEIHQMSLREGAATLHNAPLNP*SMSVSC Trigger: GCAGGACACGGACATGGAGCAGGGATTCAGTGGGGC...ATTATGTAAAGTTGCTGCTCCCTCCCTAAGTGACATTTGGTGAATCTCTAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196069.5 ENSMUST00000200039.5 |
||
| CDS-3UTR TCA 90 bp | ATCATAAGGAAGGCTTCCATGTTAGAGATTCACCAAATGTCACTTAGGGAGGGACAGGAATTCACACAATaGATCCGGGTGGTGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IIRKASMLEIHQMSLREGQEFTQ*IRVVGR Trigger: CCTTCCCACCACCCGGATTCATTGTGTGAATTCCTG...TCCCTCCCTAAGTGACATTTGGTGAATCTCTAACATGGAAGCCTTCCTTATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199003.5 ENSMUST00000200039.5 |
||
| CDS-3UTR TCA 90 bp | TCCATGTTAGAGATTCACCAAATGTCACTTAGGGAGGGAGCAGCAACTTTACATCAGGAATTCACACAATaGATCCGGGTGGTGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SMLEIHQMSLREGAATLHQEFTQ*IRVVGR Trigger: CCTTCCCACCACCCGGATTCATTGTGTGAATTCCTG...ATGTAAAGTTGCTGCTCCCTCCCTAAGTGACATTTGGTGAATCTCTAACATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199003.5 ENSMUST00000200039.5 |
||
| CDS-3UTR TCA 90 bp | TTAAGGATGCCTAAGAGAACGCAGAAATCAACAGGAAGCCAAGGGTGTGGCTATATGAGGTGTGCTCTCTaGCTGAAGTTCTCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRMPKRTQKSTGSQGCGYMRCAL*LKFSSH Trigger: ATGGGAAGAGAACTTCAGTCAGAGAGCACACCTCAT...ATAGCCACACCCTTGGCTTCCTGTTGATTTCTGCGTTCTCTTAGGCATCCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
||
| CDS-3UTR CCA 90 bp | CACGTGATCATAAGGAAGGCTTCCATGTTAGAGATTCACCAAATGTCACTTAGGAATGAATCCGGGTGGTaGGAAGGCGGAGAAGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: HVIIRKASMLEIHQMSLRNESGW*EGGEVC Trigger: GCATACTTCTCCGCCTTCCCACCACCCGGATTCATT...CCTAAGTGACATTTGGTGAATCTCTAACATGGAAGCCTTCCTTATGATCACGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000196069.5 ENSMUST00000199003.5 ENSMUST00000200039.5 |
||
| CDS-3UTR CCA 90 bp | ATCATAAGGAAGGCTTCCATGTTAGAGATTCACCAAATGTCACTTAGGGAGGGAAATGAATCCGGGTGGTaGGAAGGCGGAGAAGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: IIRKASMLEIHQMSLREGNESGW*EGGEVC Trigger: GCATACTTCTCCGCCTTCCCACCACCCGGATTCATT...TCCCTCCCTAAGTGACATTTGGTGAATCTCTAACATGGAAGCCTTCCTTATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000196069.5 ENSMUST00000199003.5 ENSMUST00000200039.5 |
||
| CDS-3UTR CCA 90 bp | AATGTTTGGGTGCCTGCCACAAACTCAGGAAGACTGAATCCTCCAAACGTATGGATCAGGCTTCGAAATTaGAAATCCCCCACTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: NVWVPATNSGRLNPPNVWIRLRN*KSPTES Trigger: GGATTCAGTGGGGGATTTCCAATTTCGAAGCCTGAT...CCATACGTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCTGGTGAGAAGCTAACACCAGAACATCATTTAAGGATGCCTAAGAGAACGTCTGGTCTCTCCATCTaGACAGTCACCTCTTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SAGEKLTPEHHLRMPKRTSGLSI*TVTSYD Trigger: GTCATAAGAGGTGACTGTTCAGATGGAGAGACCAGA...CGTTCTCTTAGGCATCCTTAAATGATGTTCTGGTGTTAGCTTCTCACCAGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
||
| CDS-3UTR TCA 90 bp | TATGCTTCAAAATACTACCCTGGCTTGATGAAGGGAGTGGAGGAGGGAACAGATATGTTGAAGCACATCTaGGCTCTGGCTACAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: YASKYYPGLMKGVEEGTDMLKHI*ALATRL Trigger: AAGTCTTGTAGCCAGAGCTCAGATGTGCTTCAACAT...ATCTGTTCCCTCCTCCACTCCCTTCATCAAGCCAGGGTAGTATTTTGAAGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
||
| CDS-3UTR GCA 90 bp | CAGATTCTGCTACTTAGGAATGAATCAAATCCTCTGCCTCAGTCACTGGAAGTGTGTGGCAGAAGTCACTaGCACACACGGTACATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QILLLRNESNPLPQSLEVCGRSH*HTRYIY Trigger: GTAAATGTACCGTGTGTGGCAGTGACTTCTGCCACA...CACTTCCAGTGACTGAGGCAGAGGATTTGATTCATTCCTAAGTAGCAGAATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGCAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACAGAAAGACATTCAGACTaGTTCTCCAAAGGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TRQLKTWTSLANVWVPATERHSD*FSKGWK Trigger: CTTCCAGCCTTTGGAGAACCAGTCTGAATGTCTTTC...TGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTGCCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| CDS-3UTR CCA 90 bp | TTCACCAAATGTCACTTAGGGAGGGAGCAGCAACTTTACATAATGGTGGCATCCGAAAGACATTCAGACTaGTTCTCCAAAGGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTKCHLGREQQLYIMVASERHSD*FSKGWK Trigger: CTTCCAGCCTTTGGAGAACCAGTCTGAATGTCTTTC...GGATGCCACCATTATGTAAAGTTGCTGCTCCCTCCCTAAGTGACATTTGGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000196069.5 ENSMUST00000199003.5 ENSMUST00000200039.5 |
||
| CDS-3UTR CCA 90 bp | TCAAGGGACTACTCTTTTGGTGCCTGTGATAAATACAAATACAGCCATGGGAAACACAATGAATCCGGGTaGTGGGAAGGCGGAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SRDYSFGACDKYKYSHGKHNESG*WEGGEV Trigger: TACTTCTCCGCCTTCCCACCACCCGGATTCATTGTG...TTTCCCATGGCTGTATTTGTATTTATCACAGGCACCAAAAGAGTAGTCCCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200039.5 |
||
| CDS-3UTR CCA 90 bp | AATGTTTGGGTGCCTGCCACAAACTCAGGAAGACTGAATCCTCCAAACGTATGGGGTTTCTCTTTGGTATaGACCCTTTCATGTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NVWVPATNSGRLNPPNVWGFSLV*TLSCWM Trigger: CATCCAACATGAAAGGGTCCATACCAAAGAGAAACC...CCATACGTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
||
| CDS-3UTR CCA 90 bp | AGACTCTTTCACAGGTTCCACACTTGTAAGACTTGGCTTTGGCATGACCCTTCTATCAGGCTTCGAAATTaGAAATCCTGGTACCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLFHRFHTCKTWLWHDPSIRLRN*KSWYLA Trigger: AGCCAGGTACCAGGATTTCCAATTTCGAAGCCTGAT...AGAAGGGTCATGCCAAAGCCAAGTCTTACAAGTGTGGAACCTGTGAAAGAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
||
| CDS-3UTR TCA 90 bp | ATAAGGAAGGCTTCCATGTTAGAGATTCACCAAATGTCACTTAGGGAGGGAGCAGAGAAGTATGCCCAGTaGGACCACGTTTCCATAATT | + |
|
Preference number: 4 (lower is better) Translates to: IRKASMLEIHQMSLREGAEKYAQ*DHVSII Trigger: AATTATGGAAACGTGGTCTCACTGGGCATACTTCTC...TGCTCCCTCCCTAAGTGACATTTGGTGAATCTCTAACATGGAAGCCTTCCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200039.5 |
||
| CDS-3UTR CCA 90 bp | CAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACAAACTCAGAAAGACATTCAGACTaGTTCTCCAAAGGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QLKTWTSLANVWVPATNSERHSD*FSKGWK Trigger: CTTCCAGCCTTTGGAGAACCAGTCTGAATGTCTTTC...TGAGTTTGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167316.8 ENSMUST00000199322.5 |
||
| CDS-3UTR CCA 90 bp | TTAAGGATGCCTAAGAGAACGCAGAAATCAACAGGAAGCCAAGGGTGTGGCTATCCAACTGCTGGGTTCTaGTTGAAGTTCATGTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LRMPKRTQKSTGSQGCGYPTAGF*LKFMSY Trigger: ATATGACATGAACTTCAACCAGAACCCAGCAGTTGG...ATAGCCACACCCTTGGCTTCCTGTTGATTTCTGCGTTCTCTTAGGCATCCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
||
| CDS-3UTR CCA 90 bp | AATGCACGTGATCATAAGGAAGGCTTCCATGTTAGAGATTCACCAAATGTCACTAATGTCACAAACTCCTaGTACCTGGCTGTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NARDHKEGFHVRDSPNVTNVTNS*YLAVRS Trigger: GCTCCTGACAGCCAGGTACCAGGAGTTTGTGACATT...AGTGACATTTGGTGAATCTCTAACATGGAAGCCTTCCTTATGATCACGTGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200039.5 |
||
| CDS-3UTR TCA 90 bp | CAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACAAACTCACTGCTGGGTTCTGGTTaGAGTTCATGTCATATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QLKTWTSLANVWVPATNSLLGSG*SSCHIY Trigger: GTAAATATGACATGAACTTCAACCAGAACCCAGCAG...TGAGTTTGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGGATGCCTAAGAGAACGCAGAAATCAACAGGAAGCCAAGGGTGTGGCTATATGGGAACTTCTTGTTaGAGAGTAAGATCAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LRMPKRTQKSTGSQGCGYMGTSC*RVRSEL Trigger: CAGTTCTGATCTTACTCTGCAACAAGAAGTTCCCAT...ATAGCCACACCCTTGGCTTCCTGTTGATTTCTGCGTTCTCTTAGGCATCCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
||
| CDS-3UTR CCA 90 bp | ATCATAAGGAAGGCTTCCATGTTAGAGATTCACCAAATGTCACTTAGGGAGGGAGAAAGACATTCAGACTaGTTCTCCAAAGGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IIRKASMLEIHQMSLREGERHSD*FSKGWK Trigger: CTTCCAGCCTTTGGAGAACCAGTCTGAATGTCTTTC...TCCCTCCCTAAGTGACATTTGGTGAATCTCTAACATGGAAGCCTTCCTTATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000196069.5 ENSMUST00000199003.5 ENSMUST00000200039.5 |
||
| CDS-3UTR TCA 90 bp | ACAAGGCAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACACTGGTTTCAGGAACTTaGGCAATATCTTGTTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TRQLKTWTSLANVWVPATLVSGT*AISCLN Trigger: ATTCAAACAAGATATTGCTCAAGTTCCTGAAACCAG...TGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTGCCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGGCAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACAGATCAGAACTGTGACTaGAACTTTCCTCATAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: TRQLKTWTSLANVWVPATDQNCD*NFPHNC Trigger: ACAATTATGAGGAAAGTTTCAGTCACAGTTCTGATC...TGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTGCCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTGGAGGAGGGAACAGATAAAGAAGCAATCCTAATGATTAAGGTTTTACCAATGTTGGATGAGGTGTaGTCTCTGACTGAAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVEEGTDKEAILMIKVLPMLDEV*SLTEVL Trigger: GAGAACTTCAGTCAGAGAGCACACCTCATCCAACAT...TGGTAAAACCTTAATCATTAGGATTGCTTCTTTATCTGTTCCCTCCTCCACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
||
| CDS-3UTR CCA 90 bp | AAATGTTTGGGTGCCTGCCACAAACTCAGGAAGACTGAATCCTCCAAACGTATGACTTATAAACCTCTCTaGTTTCAGGAACTTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KCLGACHKLRKTESSKRMTYKPL*FQELEQ Trigger: TTGCTCAAGTTCCTGAAACCAGAGAGGTTTATAAGT...CATACGTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
||
| CDS-3UTR CCA 90 bp | AGATGTTTTGATCTTAGCATTTGCATAACAATCAGACTCACATCTGGTACATTCACTAAGTATGAGGTGTaGCAGAAGTCACTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RCFDLSICITIRLTSGTFTKYEV*QKSLPH Trigger: GTGTGGCAGTGACTTCTGCCACACCTCATACTTAGT...GAATGTACCAGATGTGAGTCTGATTGTTATGCAAATGCTAAGATCAAAACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
||
| 3UTR CAA 72 bp | TGCCTAGTGCAAACATTTAATCAAGGGACTACTCTTTaGGTGCCTGTGATAAATACAAATACAGCCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLVQTFNQGTTL*VPVINTNTAMG Trigger: TCCCATGGCTGTATTTGTATTTATCACAGGCACCAAAAGAGTAGTCCCTTGATTAAATGTTTGCACTAGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200039.5 |
||
| 3UTR CAA 72 bp | TTTATTGGTTCTTGTTCACCAACTGCTGGGTTCTGGTaGAAGTTCATGTCATATTTACTGTCATCAGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FIGSCSPTAGFW*KFMSYLLSSVV Trigger: GACCACTGATGACAGTAAATATGACATGAACTTCAACCAGAACCCAGCAGTTGGTGAACAAGAACCAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
||
| CDS GCA 90 bp | ATCCGGGTGGTGGGAAGGCGGAGAAGTATGCCCCCACTGAATCCCTaGTCCATGTCCGTGTCCTGCAGAAACCGAAGCTCTGGGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: IRVVGRRRSMPPLNP*SMSVSCRNRSSGER Trigger: TCTTTCCCCAGAGCTTCGGTTTCTGCAGGACACGGACATGGAGCAGGGATTCAGTGGGGGCATACTTCTCCGCCTTCCCACCACCCGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199003.5 |
||
| CDS GCA 90 bp | CGGAGAAGTATGCCCCCACTGAATCCCTGCTCCATGTCCGTGTCCTaGAGAAACCGAAGCTCTGGGGAAAGACATTCAGACTGGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RRSMPPLNPCSMSVS*RNRSSGERHSDWFS Trigger: GGAGAACCAGTCTGAATGTCTTTCCCCAGAGCTTCGGTTTCTGCAGGACACGGACATGGAGCAGGGATTCAGTGGGGGCATACTTCTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199003.5 |
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| CDS CCA 90 bp | ACTGAATCCCTGCTCCATGTCCGTGTCCTGCAGAAACCGAAGCTCTaGGGAAAGACATTCAGACTGGTTCTCCAAAGGCTGGAAGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: TESLLHVRVLQKPKL*GKTFRLVLQRLEVA Trigger: GGCCACTTCCAGCCTTTGGAGAACCAGTCTGAATGTCTTTCCCCAGAGCTTCGGTTTCTGCAGGACACGGACATGGAGCAGGGATTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000085661.9 ENSMUST00000167316.8 ENSMUST00000196069.5 ENSMUST00000199003.5 ENSMUST00000199322.5 ENSMUST00000200039.5 |
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| CDS GCA 90 bp | ATGTCACAAACTCCCCCACTGAATCCCTGCTCCATGTCCGTGTCCTaGAGAAACCGAAGCTCTGGGGAAAGACATTCAGACTGGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: MSQTPPLNPCSMSVS*RNRSSGERHSDWFS Trigger: GGAGAACCAGTCTGAATGTCTTTCCCCAGAGCTTCGGTTTCTGCAGGACACGGACATGGAGCAGGGATTCAGTGGGGGAGTTTGTGACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085661.9 |
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| CDS-3UTR CAA 90 bp | TCAGCTGGTGAGAAGCTAACACCAGAACATCATTTAAGGATGCCTAAGAGAACGATGGACCCTTTCATGTaGGATGAGGTGTGCTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: SAGEKLTPEHHLRMPKRTMDPFM*DEVCSL Trigger: CAGAGAGCACACCTCATCCAACATGAAAGGGTCCAT...CGTTCTCTTAGGCATCCTTAAATGATGTTCTGGTGTTAGCTTCTCACCAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
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| CDS-3UTR CAA 90 bp | CAGATTCTGCTACTTAGGAATGAATCAAATCCTCTGCCTCAGTCACTGGAAGTGCATCAGGCTTCGAAATaGGAAATCCTGGTACCTGGC | + |
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Preference number: 5 (lower is better) Translates to: QILLLRNESNPLPQSLEVHQASK*EILVPG Trigger: GCCAGGTACCAGGATTTCCAATTTCGAAGCCTGATG...CACTTCCAGTGACTGAGGCAGAGGATTTGATTCATTCCTAAGTAGCAGAATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199322.5 |
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| CDS-3UTR CAA 90 bp | ACAAGGCAGCTAAAAACTTGGACATCACTTGCAAATGTTTGGGTGCCTGCCACAACTGCTGGGTTCTGGTaGAAGTTCATGTCATATTTA | + |
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Preference number: 5 (lower is better) Translates to: TRQLKTWTSLANVWVPATTAGFW*KFMSYL Trigger: TAAATATGACATGAACTTCAACCAGAACCCAGCAGT...TGTGGCAGGCACCCAAACATTTGCAAGTGATGTCCAAGTTTTTAGCTGCCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
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| CDS-3UTR CAA 90 bp | AAATGTTTGGGTGCCTGCCACAAACTCAGGAAGACTGAATCCTCCAAACGTATGTCTAATGGGAACTTCTaGTTGCAGAGTAAGATCAGA | + |
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Preference number: 5 (lower is better) Translates to: KCLGACHKLRKTESSKRMSNGNF*LQSKIR Trigger: TCTGATCTTACTCTGCAACAAGAAGTTCCCATTAGA...CATACGTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
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| CDS-3UTR CAA 90 bp | AAATGTTTGGGTGCCTGCCACAAACTCAGGAAGACTGAATCCTCCAAACGTATGCTGCTGAAAGTCTTCTaGCTGATTGTTATTTGTCTA | + |
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Preference number: 5 (lower is better) Translates to: KCLGACHKLRKTESSKRMLLKVF*LIVICL Trigger: TAGACAAATAACAATCAGCAAGAAGACTTTCAGCAG...CATACGTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167316.8 |
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| CDS GCA 72 bp | GTGGGAAGGCGGAGAAGTATGCCCCCACTGAATCCCTaGTCCATGTCCGTGTCCTGCAGAAACCGAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VGRRRSMPPLNP*SMSVSCRNRSS Trigger: AGAGCTTCGGTTTCTGCAGGACACGGACATGGAGCAGGGATTCAGTGGGGGCATACTTCTCCGCCTTCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199003.5 |
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| CDS CCA 72 bp | TCTGGGGAAAGACATTCAGACTGGTTCTCCAAAGGCTaGAAGTGGCCCCTGGGTGACTCTGCGGCTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SGERHSDWFSKG*KWPLGDSAASW Trigger: CCAAGAAGCCGCAGAGTCACCCAGGGGCCACTTCCAGCCTTTGGAGAACCAGTCTGAATGTCTTTCCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000085661.9 ENSMUST00000167316.8 ENSMUST00000196069.5 ENSMUST00000199003.5 ENSMUST00000199322.5 ENSMUST00000200039.5 |
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| CDS CCA 72 bp | TGCAGAAACCGAAGCTCTGGGGAAAGACATTCAGACTaGTTCTCCAAAGGCTGGAAGTGGCCCCTGGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: CRNRSSGERHSD*FSKGWKWPLGD Trigger: GTCACCCAGGGGCCACTTCCAGCCTTTGGAGAACCAGTCTGAATGTCTTTCCCCAGAGCTTCGGTTTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000085661.9 ENSMUST00000167316.8 ENSMUST00000196069.5 ENSMUST00000199003.5 ENSMUST00000199322.5 ENSMUST00000200039.5 |
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| CDS GCA 72 bp | CATCCTCGAATGTCACAAACTCCCCCACTGAATCCCTaGTCCATGTCCGTGTCCTGCAGAAACCGAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: HPRMSQTPPLNP*SMSVSCRNRSS Trigger: AGAGCTTCGGTTTCTGCAGGACACGGACATGGAGCAGGGATTCAGTGGGGGAGTTTGTGACATTCGAGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085661.9 |
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| CDS CCA 72 bp | GAAAGACATTCAGACTGGTTCTCCAAAGGCTGGAAGTaGCCCCTGGGTGACTCTGCGGCTTCTTGGGATGTT | + |
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Preference number: 6 (lower is better) Translates to: ERHSDWFSKGWK*PLGDSAASWDV Trigger: AACATCCCAAGAAGCCGCAGAGTCACCCAGGGGCCACTTCCAGCCTTTGGAGAACCAGTCTGAATGTCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000085661.9 ENSMUST00000167316.8 ENSMUST00000196069.5 ENSMUST00000199003.5 ENSMUST00000199322.5 ENSMUST00000200039.5 |
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| CDS CCA 72 bp | CTGCTCCATGTCCGTGTCCTGCAGAAACCGAAGCTCTaGGGAAAGACATTCAGACTGGTTCTCCAAAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLHVRVLQKPKL*GKTFRLVLQRL Trigger: CAGCCTTTGGAGAACCAGTCTGAATGTCTTTCCCCAGAGCTTCGGTTTCTGCAGGACACGGACATGGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000085661.9 ENSMUST00000167316.8 ENSMUST00000196069.5 ENSMUST00000199003.5 ENSMUST00000199322.5 ENSMUST00000200039.5 |
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