Pregenerated sensors for ZFP653 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038895Ensembl transcript IDs: ENSMUST00000043922.7, ENSMUST00000179605.9
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTTTCACTTTAATCTCATTCTGTGCTCTTGACACAGTTCAGCAGTaGAATCCCATGTGCCAGCTCCATGGGTGGGATGTGATGGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: FFTLISFCALDTVQQ*NPMCQLHGWDVMGQ Trigger: CTGCCCCATCACATCCCACCCATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGAGATTAAAGTGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| 3UTR-3UTR TCA 90 bp | GGTGGGGCACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGCAAATAAATAGAGGCTaGGGTCCATGGGCATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: GGAPAQGRVGMPPSGLRLQINRG*GPWAWA Trigger: TGCCCATGCCCATGGACCTCAGCCTCTATTTATTTG...CAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTGCCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATGGGTGTGATGGGGCAGGGTaGGGCACCTGCCCAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: FCALDTVQQCNPMCQLHGCDGAG*GTCPGK Trigger: CTTCCCTGGGCAGGTGCCCCACCCTGCCCCATCACA...CCCATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| 3UTR-3UTR GCA 90 bp | TTTTTCACTTTAATCTCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCGCAGGGTGGGGCACCTaGCCAGGGAAGAGTGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: FFTLISFCALDTVQQCNPAGWGT*PGKSGN Trigger: ATTCCCACTCTTCCCTGGGCAGGTGCCCCACCCTGC...GGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGAGATTAAAGTGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| 3UTR-3UTR CCA 90 bp | TTTTTCACTTTAATCTCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCTGCCAGCTCCATGGGTaGGATGTGATGGGGCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: FFTLISFCALDTVQQCNPCQLHG*DVMGQG Trigger: ACCCTGCCCCATCACATCCCACCCATGGAGCTGGCA...GGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGAGATTAAAGTGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| 3UTR CCA 72 bp | AGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTaGGGCAGCCCCTGTGGCTGGCTATCTAGGGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: REEWECLLPACG*GSPCGWLSRAL Trigger: CAGAGCCCTAGATAGCCAGCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| 3UTR GCA 72 bp | TTAATCTCATTCTGTGCTCTTGACACAGTTCAGCAGTaGAATCCCATGTGCCAGCTCCATGGGTGGGATGTG | + |
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Preference number: 3 (lower is better) Translates to: LISFCALDTVQQ*NPMCQLHGWDV Trigger: CACATCCCACCCATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGAGATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR TCA 90 bp | AGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCGCCGGGCACCATGCCTaGCACCGGGCAGCTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: REEWECLLPACGWGSPCGAGHHA*HRAAGH Trigger: GTGGCCAGCTGCCCGGTGTCAGGCATGGTGCCCGGC...GCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | AGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCCGTCGCTCCAGCCGCTaGGGCGTCTCAGGTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: REEWECLLPACGWGSPCGRRSSR*GVSGPP Trigger: GGGTGGACCTGAGACGCCGCAGCGGCTGGAGCGACG...GCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR TCA 90 bp | AGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTCCATGGTGCTGTGCTaGGTGCCCTCGGGCTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: REEWECLLPACGWGSPCGSMVLC*VPSGSV Trigger: GACGGAGCCCGAGGGCACTCAGCACAGCACCATGGA...GCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | CCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTAGGGCTCTGATCGTCGGGTGCCGGGGCCAGTaGCCACTTGCATGGGAACTG | + |
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Preference number: 4 (lower is better) Translates to: PACGWGSPCGWLSRALIVGCRGQ*PLAWEL Trigger: CAGTTCCCATGCAAGTGGGCACTGGCCCCGGCACCC...GACGATCAGAGCCCTAGATAGCCAGCCACAGGGGCTGCCCCAACCGCAGGCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | AGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCGAGGCTTTGGCTGGCTaGGTCTCAGGAGGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: REEWECLLPACGWGSPCGEALAG*VSGGSS Trigger: GGAGGAGCCTCCTGAGACCCAGCCAGCCAAAGCCTC...GCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | CCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTAGGGCTCTGATCGTCCTGCCTGCAGGGTTTTaGCACAGAGGGGTGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PACGWGSPCGWLSRALIVLPAGF*HRGVPC Trigger: GCAGGGCACCCCTCTGTGCCAAAACCCTGCAGGCAG...GACGATCAGAGCCCTAGATAGCCAGCCACAGGGGCTGCCCCAACCGCAGGCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR TCA 90 bp | TGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTGGATGCCCTCGGCTGTaGGAGCGTCATAGCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: WECLLPACGWGSPCGWLSGCPRL*ERHSQD Trigger: GTCCTGGCTATGACGCTCTCACAGCCGAGGGCATCC...AGATAGCCAGCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | GAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGCCACACCCTCCATCATaGCACAGGGCACCTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: EEWECLLPACGWGSPCGWPHPPS*HRAPPH Trigger: GTGAGGAGGTGCCCTGTGCCATGATGGAGGGTGTGG...CCAGCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | CCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTAGGGCTCTGATCGTCCATTCTCAGGCACCGTaGCTGCCAGCTCTGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PACGWGSPCGWLSRALIVHSQAP*LPALPA Trigger: AGCTGGCAGAGCTGGCAGCCACGGTGCCTGAGAATG...GACGATCAGAGCCCTAGATAGCCAGCCACAGGGGCTGCCCCAACCGCAGGCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR TCA 90 bp | GAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGGGTTCTGGAAGCTGCTaGGAGCCACATACACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: EEWECLLPACGWGSPCGWGSGSC*EPHTPG Trigger: GCCAGGTGTATGTGGCTCTCAGCAGCTTCCAGAACC...CCAGCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR TCA 90 bp | TGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTCGCAGCGATCGCACGTaGAGTTGTACTGCACCTCGG | + |
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Preference number: 4 (lower is better) Translates to: WECLLPACGWGSPCGWLSRSDRT*SCTAPR Trigger: CCGAGGTGCAGTACAACTTCACGTGCGATCGCTGCG...AGATAGCCAGCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | GGTGGGGCACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGCTTTTTGGGGACTTaGTCCCAAGGCTTCCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: GGAPAQGRVGMPPSGLRLGFLGT*SQGFPW Trigger: CCACGGGAAGCCTTGGGAGCAAGTCCCCAAAAAGCC...CAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTGCCCCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | TGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTAGGGCTCTGATCGTCTGGACACTCAGGCACCGTGGCTaGCAGCTCTGCCAGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: CGWGSPCGWLSRALIVWTLRHRG*QLCQLW Trigger: CCAGAGCTGGCAGAGCTGGCAGCCACGGTGCCTGAG...TGTCCAGACGATCAGAGCCCTAGATAGCCAGCCACAGGGGCTGCCCCAACCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | CACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCTTCTGCCTCTGCCTCTaGATTCTCAGGCACCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: HLPREEWECLLPACGWGSFCLCL*ILRHRG Trigger: GCCACGGTGCCTGAGAATGCAGAGGCAGAGGCAGAA...GCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | CACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCTCGCGGACGCCTGAATaGATGATCATGTGGCGTCGC | + |
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Preference number: 4 (lower is better) Translates to: HLPREEWECLLPACGWGSSRTPE*MIMWRR Trigger: GCGACGCCACATGATCATCCATTCAGGCGTCCGCGA...GCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR TCA 90 bp | GAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGTTGCCACAGCCAGGGTaGGGACACACTTTGGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: EEWECLLPACGWGSPCGWLPQPG*GHTLVF Trigger: GAAGACCAAAGTGTGTCCTCACCCTGGCTGTGGCAA...CCAGCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | TGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTCGTCTGTGTGTAGGCTaGCACACCCTCCATCATGGC | + |
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Preference number: 4 (lower is better) Translates to: WECLLPACGWGSPCGWLSRLCVG*HTLHHG Trigger: GCCATGATGGAGGGTGTGGCAGCCTACACACAGACG...AGATAGCCAGCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | AGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCCCACATACACCTGGCTaGAGCCCTCGTATGGACAGT | + |
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Preference number: 4 (lower is better) Translates to: REEWECLLPACGWGSPCGPHTPG*SPRMDS Trigger: ACTGTCCATACGAGGGCTGCAGCCAGGTGTATGTGG...GCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | CACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCGCCAGGCTCTCCACATaGTGGACGTCAAAGGGGATA | + |
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Preference number: 4 (lower is better) Translates to: HLPREEWECLLPACGWGSARLST*WTSKGI Trigger: TATCCCCTTTGACGTCCACCATGTGGAGAGCCTGGC...GCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | CACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCAGTGCCCACTTGCATaGGAACTGGCACACACACCA | + |
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Preference number: 4 (lower is better) Translates to: HLPREEWECLLPACGWGSQCPLA*ELAHTP Trigger: TGGTGTGTGTGCCAGTTCCCATGCAAGTGGGCACTG...GCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | GGTGGGGCACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGCCCTCGTATGGACAGTaGAACATCTCCAGCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GGAPAQGRVGMPPSGLRLPSYGQ*NISSRP Trigger: TGGCCTGCTGGAGATGTTCCACTGTCCATACGAGGG...CAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTGCCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | GGTGGGGCACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGCTGCAGCCCTCGTATaGACAGTGGAACATCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GGAPAQGRVGMPPSGLRLAAALV*TVEHLQ Trigger: CTGGAGATGTTCCACTGTCCATACGAGGGCTGCAGC...CAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTGCCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | CACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCAGAGCCACATACACCTaGCTGCAGCCCTCGTATGGA | + |
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Preference number: 4 (lower is better) Translates to: HLPREEWECLLPACGWGSRATYT*LQPSYG Trigger: TCCATACGAGGGCTGCAGCCAGGTGTATGTGGCTCT...GCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | AGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCGGTTTGTGGTCCGGGTaGCTTTTGAGCGTGTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: REEWECLLPACGWGSPCGGLWSG*LLSVWN Trigger: GTTCCACACGCTCAAAAGCCACCCGGACCACAAACC...GCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR TCA 90 bp | TGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTTCTTCATGTGCCAATTaGGCGAAGCACGCTGCCGAC | + |
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Preference number: 4 (lower is better) Translates to: WECLLPACGWGSPCGWLSSSCAN*AKHAAD Trigger: GTCGGCAGCGTGCTTCGCTCAATTGGCACATGAAGA...AGATAGCCAGCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | TGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTAGGGCTCTGATCGTCTGGACACACCACCTCACCCAGTaGCTCCTGGGGCATGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: CGWGSPCGWLSRALIVWTHHLTQ*LLGHVL Trigger: GAGAACATGCCCCAGGAGGCACTGGGTGAGGTGGTG...TGTCCAGACGATCAGAGCCCTAGATAGCCAGCCACAGGGGCTGCCCCAACCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | AGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCCACGTGAAGTTGTACTaGACCTCGGCTGTGTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: REEWECLLPACGWGSPCGHVKLY*TSAVCF Trigger: GAAGCACACAGCCGAGGTGCAGTACAACTTCACGTG...GCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | CACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCGTAAAGGCCAAAGGTTaGGTCAAGCTCAGCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: HLPREEWECLLPACGWGSVKAKG*VKLSQV Trigger: CACCTGGCTGAGCTTGACCCAACCTTTGGCCTTTAC...GCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | TTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATGGGGGCCCCGCGCCTTTCTaGCTGCCGCGCCTTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: FCALDTVQQCNPMCQLHGGPAPF*LPRLPL Trigger: CAGAGGAAGGCGCGGCAGGCAGAAAGGCGCGGGGCC...CCCATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | GGTGGGGCACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGTTCTCCATCCACTTCTaGCTCTGCCTCTGCATTCTC | + |
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Preference number: 4 (lower is better) Translates to: GGAPAQGRVGMPPSGLRLFSIHF*LCLCIL Trigger: GAGAATGCAGAGGCAGAGGCAGAAGTGGATGGAGAA...CAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTGCCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | CACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCGTCTTCCCTTTTCGGTaGACAAGGTTGACGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: HLPREEWECLLPACGWGSVFPFR*TRLTWF Trigger: GAACCACGTCAACCTTGTGCACCGAAAAGGGAAGAC...GCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | GAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGTGCACCTCGGCTGTGTaGTTCTTCATGTGCCAATTG | + |
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Preference number: 4 (lower is better) Translates to: EEWECLLPACGWGSPCGWCTSAV*FFMCQL Trigger: CAATTGGCACATGAAGAAGCACACAGCCGAGGTGCA...CCAGCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | GGTGGGGCACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGTGGCTTTTGAGCGTGTaGAACTTGACACTGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GGAPAQGRVGMPPSGLRLWLLSV*NLTLSS Trigger: GCTGGACAGTGTCAAGTTCCACACGCTCAAAAGCCA...CAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTGCCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR TCA 90 bp | TGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTCCTCTTTCTCCTCCTTaGGCATATACAGGTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: WECLLPACGWGSPCGWLSPLSPP*AYTGPP Trigger: AGGAGGACCTGTATATGCTCAAGGAGGAGAAAGAGG...AGATAGCCAGCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | TGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTAGGGCTCTGATCGTCTGGACATCACCCAGTGCCTCCTaGGGCATGTTCTCAAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: CGWGSPCGWLSRALIVWTSPSAS*GMFSKR Trigger: CCTCTTTGAGAACATGCCCCAGGAGGCACTGGGTGA...TGTCCAGACGATCAGAGCCCTAGATAGCCAGCCACAGGGGCTGCCCCAACCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR TCA 90 bp | AGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCCTCATAGATGATGGCTaGCATTTCACTGCTGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: REEWECLLPACGWGSPCGLIDDG*HFTAVQ Trigger: TTGGACAGCAGTGAAATGTCAGCCATCATCTATGAG...GCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | TTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATGGGGGTAGGCGGCAAGTTTaGCGTCGCTCCAGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FCALDTVQQCNPMCQLHGGRRQV*RRSSRC Trigger: GCAGCGGCTGGAGCGACGCCAAACTTGCCGCCTACC...CCCATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | TCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATCACCCAGGCTGCTGCTaGGAGTGCCGCCGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SFCALDTVQQCNPMCQLHHPGCC*ECRRQQ Trigger: CTGCTGGCGGCGGCACTCCCAGCAGCAGCCTGGGTG...ATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR TCA 90 bp | TGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTAGGGCTCTGATCGTCTGGACAGATGGTTCTTCCTCTTaGAAGACTTGCCGCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: CGWGSPCGWLSRALIVWTDGSSS*KTCRRS Trigger: AGACCTGCGGCAAGTCTTTCAAGAGGAAGAACCATC...TGTCCAGACGATCAGAGCCCTAGATAGCCAGCCACAGGGGCTGCCCCAACCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | AGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGCTGACATTTCACTaGTGTCCAATTCTTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: REEWECLLPACGWGSPCGWLTFH*CPILLH Trigger: ATGGAGAAGAATTGGACAGCAGTGAAATGTCAGCCA...GCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | GAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGATAAATAAAACTTCTTaGCACAGCCAGGGTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EEWECLLPACGWGSPCGWINKTS*HSQGED Trigger: GTCCTCACCCTGGCTGTGGCAAGAAGTTTTATTTAT...CCAGCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | TGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTAGGGCTCTGATCGTCTGGACATGCACAAGGTTGACGTaGTTCTGGAAGCTGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CGWGSPCGWLSRALIVWTCTRLT*FWKLLR Trigger: TCTCAGCAGCTTCCAGAACCACGTCAACCTTGTGCA...TGTCCAGACGATCAGAGCCCTAGATAGCCAGCCACAGGGGCTGCCCCAACCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | TGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTAGGGCTCTGATCGTCTGGACAGGTGAGGACACACTTTaGTCTTCCCTTTTCGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGWGSPCGWLSRALIVWTGEDTL*SSLFGA Trigger: TGCACCGAAAAGGGAAGACCAAAGTGTGTCCTCACC...TGTCCAGACGATCAGAGCCCTAGATAGCCAGCCACAGGGGCTGCCCCAACCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR TCA 90 bp | TCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATGGAGCCCGAGCTGGATaGGTCAGAGCTGCCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SFCALDTVQQCNPMCQLHGARAG*VRAASH Trigger: GTGGCTGGCAGCTCTGACTCATCCAGCTCGGGCTCC...ATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR TCA 90 bp | TTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATGGGAGCATCCATCACACGTaGCCGCTTGCTCCGCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FCALDTVQQCNPMCQLHGSIHHT*PLAPPS Trigger: AGACGGCGGAGCAAGCGGTCACGTGTGATGGATGCT...CCCATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | TTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATGGGTGGATGAGTCAGAGCTaGCAGCCACCAGGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FCALDTVQQCNPMCQLHGWMSQS*QPPGHC Trigger: GCAGTGGCCTGGTGGCTGGCAGCTCTGACTCATCCA...CCCATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | TTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATGGGCAGCAGCTGAGGCTTTaGCTGGCTGGGTCTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FCALDTVQQCNPMCQLHGQQLRL*LAGSQE Trigger: CTCCTGAGACCCAGCCAGCCAAAGCCTCAGCTGCTG...CCCATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | TCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATAAGCTCAGCCAGGTGTaGCTCATACGGGCAGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFCALDTVQQCNPMCQLHKLSQV*LIRAAV Trigger: CACCGCTGCCCGTATGAGCCACACCTGGCTGAGCTT...ATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | TCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATAGCTGGAGCCCGAGCTaGATGAGTCAGAGCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFCALDTVQQCNPMCQLHSWSPS*MSQSCQ Trigger: CTGGCAGCTCTGACTCATCCAGCTCGGGCTCCAGCT...ATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | TTTTTCACTTTAATCTCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCTCCACCCAGGGGCCGTaGGCCTCGCCCAGGTACACG | + |
|
Preference number: 4 (lower is better) Translates to: FFTLISFCALDTVQQCNPSTQGP*ASPRYT Trigger: CGTGTACCTGGGCGAGGCGCACGGCCCCTGGGTGGA...GGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGAGATTAAAGTGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | TCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATGCAATGATGATCACCTaGGAGCCGGGCACCATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFCALDTVQQCNPMCQLHAMMIT*EPGTMP Trigger: AGGCATGGTGCCCGGCTCCCAGGTGATCATCATTGC...ATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | TCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATTCCGCTTTGGCTTTTTaGGGACTTGCTCCCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFCALDTVQQCNPMCQLHSALAF*GLAPKA Trigger: AGCCTTGGGAGCAAGTCCCCAAAAAGCCAAAGCGGA...ATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | TTTTTCACTTTAATCTCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCCACAGAGGGGTGCCCTaGTCAGCCAGGCTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FFTLISFCALDTVQQCNPHRGVP*SARLST Trigger: TGTGGAGAGCCTGGCTGAGCAGGGCACCCCTCTGTG...GGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGAGATTAAAGTGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | TTTTTCACTTTAATCTCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCCAGCCACCAGGCCACTaGCCACTTTGTCACTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FFTLISFCALDTVQQCNPQPPGH*PLCHCQ Trigger: CTGACAGTGACAAAGTGGGCAGTGGCCTGGTGGCTG...GGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGAGATTAAAGTGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | TCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATGGCGTCGCAGGTGGTTaGATAAATAAAACTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFCALDTVQQCNPMCQLHGVAGG*INKTSC Trigger: GCAAGAAGTTTTATTTATCCAACCACCTGCGACGCC...ATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | TTTTTCACTTTAATCTCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCGGGCAGCGGTGTTTGTaGTCCTCATACCAGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: FFTLISFCALDTVQQCNPGQRCL*SSYQMT Trigger: GGTCATCTGGTATGAGGACCACAAACACCGCTGCCC...GGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGAGATTAAAGTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR GCA 90 bp | TTTTTCACTTTAATCTCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCGTGTGCTTCTTCATGTaGCAATTGAGCGAAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: FFTLISFCALDTVQQCNPVCFFM*QLSEAR Trigger: GCGTGCTTCGCTCAATTGGCACATGAAGAAGCACAC...GGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGAGATTAAAGTGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CCA 90 bp | TTTTTCACTTTAATCTCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCGAATGGATGATCATGTaGCGTCGCAGGTGGTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FFTLISFCALDTVQQCNPEWMIM*RRRWLD Trigger: ATCCAACCACCTGCGACGCCACATGATCATCCATTC...GGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGAGATTAAAGTGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS GCA 90 bp | GCGTCGCTCCAGCCGCTGCGGCGTCTCAGGTCCACCCAGGGGCCGTaGGCCTCGCCCAGGTACACGCGCCGCACGTCGTACTTCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ASLQPLRRLRSTQGP*ASPRYTRRTSYFFR Trigger: CCGGAAGAAGTACGACGTGCGGCGCGTGTACCTGGGCGAGGCGCACGGCCCCTGGGTGGACCTGAGACGCCGCAGCGGCTGGAGCGACGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS TCA 90 bp | AAGGCTTCCCGTGGCGACCGCTACGCTGGCCACGCTCCAGCGAAATaGGGTAGGCGGCAAGTTTGGCGTCGCTCCAGCCGCTGCGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: KASRGDRYAGHAPAK*GRRQVWRRSSRCGV Trigger: GACGCCGCAGCGGCTGGAGCGACGCCAAACTTGCCGCCTACCTCATTTCGCTGGAGCGTGGCCAGCGTAGCGGTCGCCACGGGAAGCCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS GCA 90 bp | TGGGAACTGGCACACACACCACCGTCTCCAGGGCCTCAGGCCCGCTaGCTGCAGGGTTTTGGCACAGAGGGGTGCCCTGCTCAGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: WELAHTPPSPGPQAR*LQGFGTEGCPAQPG Trigger: GCCTGGCTGAGCAGGGCACCCCTCTGTGCCAAAACCCTGCAGGCAGCGGGCCTGAGGCCCTGGAGACGGTGGTGTGTGTGCCAGTTCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS-3UTR CAA 90 bp | GGTGGGGCACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGCTGCCTGCAGGGTTTaGGCACAGAGGGGTGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGAPAQGRVGMPPSGLRLAACRV*AQRGAL Trigger: CAGGGCACCCCTCTGTGCCAAAACCCTGCAGGCAGC...CAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTGCCCCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS GCA 90 bp | AACTGGCACACACACCACCGTCTCCAGGGCCTCAGGCCCGCTGCCTaGAGGGTTTTGGCACAGAGGGGTGCCCTGCTCAGCCAGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: NWHTHHRLQGLRPAA*RVLAQRGALLSQAL Trigger: GAGAGCCTGGCTGAGCAGGGCACCCCTCTGTGCCAAAACCCTGCAGGCAGCGGGCCTGAGGCCCTGGAGACGGTGGTGTGTGTGCCAGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 90 bp | CTGGCAGGGGTGAGAGCTGCAGCAGCAGCTGAGGCTTTGGCTGGCTaGGTCTCAGGAGGCTCCTCCGAGTCAGAGCTGGAGCCCGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAGVRAAAAAEALAG*VSGGSSESELEPEL Trigger: CAGCTCGGGCTCCAGCTCTGACTCGGAGGAGCCTCCTGAGACCCAGCCAGCCAAAGCCTCAGCTGCTGCTGCAGCTCTCACCCCTGCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 90 bp | GGGGCATGTTCTCAAAGAGGGTGCCGGGGCCAGTGCCCACTTGCATaGGAACTGGCACACACACCACCGTCTCCAGGGCCTCAGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GACSQRGCRGQCPLA*ELAHTPPSPGPQAR Trigger: GCGGGCCTGAGGCCCTGGAGACGGTGGTGTGTGTGCCAGTTCCCATGCAAGTGGGCACTGGCCCCGGCACCCTCTTTGAGAACATGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS-3UTR CAA 90 bp | CACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCGGGGCCAGTGCCCACTaGCATGGGAACTGGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: HLPREEWECLLPACGWGSGASAH*HGNWHT Trigger: TGTGTGCCAGTTCCCATGCAAGTGGGCACTGGCCCC...GCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CAA 90 bp | GGTGGGGCACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGTGGCTTTTTGGGGACTaGCTCCCAAGGCTTCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGAPAQGRVGMPPSGLRLWLFGD*LPRLPV Trigger: CACGGGAAGCCTTGGGAGCAAGTCCCCAAAAAGCCA...CAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTGCCCCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CAA 90 bp | TGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTCGATCGCACGTGAAGTaGTACTGCACCTCGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WECLLPACGWGSPCGWLSRSHVK*YCTSAV Trigger: CACAGCCGAGGTGCAGTACAACTTCACGTGCGATCG...AGATAGCCAGCCACAGGGGCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CAA 90 bp | GGTGGGGCACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGTGGTCCGGGTGGCTTTaGAGCGTGTGGAACTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: GGAPAQGRVGMPPSGLRLWSGWL*SVWNLT Trigger: TGTCAAGTTCCACACGCTCAAAAGCCACCCGGACCA...CAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTGCCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS CCA 90 bp | GGCAGTTCACATTGCGCCGCCGCCTTTTCTTCCGCTTTGGCTTTTTaGGGACTTGCTCCCAAGGCTTCCCGTGGCGACCGCTACGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSHCAAAFSSALAF*GLAPKASRGDRYAG Trigger: GCCAGCGTAGCGGTCGCCACGGGAAGCCTTGGGAGCAAGTCCCCAAAAAGCCAAAGCGGAAGAAAAGGCGGCGGCGCAATGTGAACTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS-3UTR CAA 90 bp | CACCTGCCCAGGGAAGAGTGGGAATGCCTCCTTCCGGCCTGCGGTTGGGGCAGCTTGAGCGTGTGGAACTaGACACTGTCCAGCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HLPREEWECLLPACGWGSLSVWN*TLSSFS Trigger: CGAGAAGCTGGACAGTGTCAAGTTCCACACGCTCAA...GCTGCCCCAACCGCAGGCCGGAAGGAGGCATTCCCACTCTTCCCTGGGCAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS GCA 90 bp | ACCTCGGCTGTGTGCTTCTTCATGTGCCAATTGAGCGAAGCACGCTaGCGACACTGGTACCCGCATATCTCGCACTGCAGGGGCGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSAVCFFMCQLSEAR*RHWYPHISHCRGVS Trigger: GGAGACGCCCCTGCAGTGCGAGATATGCGGGTACCAGTGTCGGCAGCGTGCTTCGCTCAATTGGCACATGAAGAAGCACACAGCCGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 90 bp | GTGTGCTTCTTCATGTGCCAATTGAGCGAAGCACGCTGCCGACACTaGTACCCGCATATCTCGCACTGCAGGGGCGTCTCCCCAGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VCFFMCQLSEARCRH*YPHISHCRGVSPVC Trigger: GCACACTGGGGAGACGCCCCTGCAGTGCGAGATATGCGGGTACCAGTGTCGGCAGCGTGCTTCGCTCAATTGGCACATGAAGAAGCACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS TCA 90 bp | TGGACAGTGGAACATCTCCAGCAGGCCATCAGCATCCATCACACGTaGCCGCTTGCTCCGCCGTCTCTTCTCGGGCTCCTTGGGAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: WTVEHLQQAISIHHT*PLAPPSLLGLLGNL Trigger: GAGATTCCCAAGGAGCCCGAGAAGAGACGGCGGAGCAAGCGGTCACGTGTGATGGATGCTGATGGCCTGCTGGAGATGTTCCACTGTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 90 bp | TCCAGCCTCGCACTGCCACACAGCCGTTGTGTAAAGGCCAAAGGTTaGGTCAAGCTCAGCCAGGTGTGGCTCATACGGGCAGCGGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLALPHSRCVKAKG*VKLSQVWLIRAAVF Trigger: AAACACCGCTGCCCGTATGAGCCACACCTGGCTGAGCTTGACCCAACCTTTGGCCTTTACACAACGGCTGTGTGGCAGTGCGAGGCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS-3UTR CAA 90 bp | CCGGCCTGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTAGGGCTCTGATCGTCTCCTCCTTCTCTTTCTaGGTCTCAATGCTGGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: PACGWGSPCGWLSRALIVSSFSF*VSMLAI Trigger: TATAGCCAGCATTGAGACCAAGAAAGAGAAGGAGGA...GACGATCAGAGCCCTAGATAGCCAGCCACAGGGGCTGCCCCAACCGCAGGCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CAA 90 bp | TGCGGTTGGGGCAGCCCCTGTGGCTGGCTATCTAGGGCTCTGATCGTCTGGACATTTCGGTGCACAAGGTaGACGTGGTTCTGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CGWGSPCGWLSRALIVWTFRCTR*TWFWKL Trigger: CAGCTTCCAGAACCACGTCAACCTTGTGCACCGAAA...TGTCCAGACGATCAGAGCCCTAGATAGCCAGCCACAGGGGCTGCCCCAACCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS GCA 90 bp | TTCCCGCAGCGATCGCACGTGAAGTTGTACTGCACCTCGGCTGTGTaGTTCTTCATGTGCCAATTGAGCGAAGCACGCTGCCGACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: FPQRSHVKLYCTSAV*FFMCQLSEARCRHW Trigger: CCAGTGTCGGCAGCGTGCTTCGCTCAATTGGCACATGAAGAAGCACACAGCCGAGGTGCAGTACAACTTCACGTGCGATCGCTGCGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 90 bp | ACAAGGTTGACGTGGTTCTGGAAGCTGCTGAGAGCCACATACACCTaGCTGCAGCCCTCGTATGGACAGTGGAACATCTCCAGCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TRLTWFWKLLRATYT*LQPSYGQWNISSRP Trigger: TGGCCTGCTGGAGATGTTCCACTGTCCATACGAGGGCTGCAGCCAGGTGTATGTGGCTCTCAGCAGCTTCCAGAACCACGTCAACCTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
||
| CDS GCA 90 bp | TCGCACGTGAAGTTGTACTGCACCTCGGCTGTGTGCTTCTTCATGTaGCAATTGAGCGAAGCACGCTGCCGACACTGGTACCCGCATATC | + |
|
Preference number: 5 (lower is better) Translates to: SHVKLYCTSAVCFFM*QLSEARCRHWYPHI Trigger: GATATGCGGGTACCAGTGTCGGCAGCGTGCTTCGCTCAATTGGCACATGAAGAAGCACACAGCCGAGGTGCAGTACAACTTCACGTGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
||
| CDS GCA 90 bp | AGCTTCTCGAAGCGCTTCCCGCAGCGATCGCACGTGAAGTTGTACTaGACCTCGGCTGTGTGCTTCTTCATGTGCCAATTGAGCGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFSKRFPQRSHVKLY*TSAVCFFMCQLSEA Trigger: TGCTTCGCTCAATTGGCACATGAAGAAGCACACAGCCGAGGTGCAGTACAACTTCACGTGCGATCGCTGCGGGAAGCGCTTCGAGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
||
| CDS CCA 90 bp | GGGTCAAGCTCAGCCAGGTGTGGCTCATACGGGCAGCGGTGTTTGTaGTCCTCATACCAGATGACCACGTTCTTCAGGCAGTTCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: GSSSARCGSYGQRCL*SSYQMTTFFRQFTL Trigger: CAATGTGAACTGCCTGAAGAACGTGGTCATCTGGTATGAGGACCACAAACACCGCTGCCCGTATGAGCCACACCTGGCTGAGCTTGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
||
| CDS CCA 90 bp | AGCCGTTGTGTAAAGGCCAAAGGTTGGGTCAAGCTCAGCCAGGTGTaGCTCATACGGGCAGCGGTGTTTGTGGTCCTCATACCAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: SRCVKAKGWVKLSQV*LIRAAVFVVLIPDD Trigger: GTCATCTGGTATGAGGACCACAAACACCGCTGCCCGTATGAGCCACACCTGGCTGAGCTTGACCCAACCTTTGGCCTTTACACAACGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
||
| CDS-3UTR CAA 90 bp | TTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATGGGTTCAGGCAGTTCACATaGCGCCGCCGCCTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FCALDTVQQCNPMCQLHGFRQFT*RRRLFF Trigger: GAAGAAAAGGCGGCGGCGCAATGTGAACTGCCTGAA...CCCATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CAA 90 bp | TCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATTTCCGCTTTGGCTTTTaGGGGACTTGCTCCCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: SFCALDTVQQCNPMCQLHFRFGF*GTCSQG Trigger: GCCTTGGGAGCAAGTCCCCAAAAAGCCAAAGCGGAA...ATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CAA 90 bp | TCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATTACGGGCAGCGGTGTTaGTGGTCCTCATACCAGATG | + |
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Preference number: 5 (lower is better) Translates to: SFCALDTVQQCNPMCQLHYGQRC*WSSYQM Trigger: CATCTGGTATGAGGACCACAAACACCGCTGCCCGTA...ATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS TCA 90 bp | TCTTTCTCCTCCTTGAGCATATACAGGTCCTCCTTCTCTACGGGGTaGCACGGGGTGGTGTCTTTCTTGGTCTCAATGCTGGCTATAGAG | + |
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Preference number: 5 (lower is better) Translates to: SFSSLSIYRSSFSTG*HGVVSFLVSMLAIE Trigger: CTCTATAGCCAGCATTGAGACCAAGAAAGACACCACCCCGTGTCACCCCGTAGAGAAGGAGGACCTGTATATGCTCAAGGAGGAGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179605.9 |
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| CDS-3UTR CAA 90 bp | TCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATTGTAAAGGCCAAAGGTaGGGTCAAGCTCAGCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: SFCALDTVQQCNPMCQLHCKGQR*GQAQPG Trigger: ACCTGGCTGAGCTTGACCCAACCTTTGGCCTTTACA...ATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CAA 90 bp | TTTTTCACTTTAATCTCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCCCGCCAGCAGCTACATaGAGGCGGATGCCCTCGGCT | + |
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Preference number: 5 (lower is better) Translates to: FFTLISFCALDTVQQCNPPPAAT*RRMPSA Trigger: AGCCGAGGGCATCCGCCTCAATGTAGCTGCTGGCGG...GGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGAGATTAAAGTGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CAA 90 bp | TCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATTTCTTCATGTGCCAATaGAGCGAAGCACGCTGCCGA | + |
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Preference number: 5 (lower is better) Translates to: SFCALDTVQQCNPMCQLHFFMCQ*SEARCR Trigger: TCGGCAGCGTGCTTCGCTCAATTGGCACATGAAGAA...ATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS-3UTR CAA 90 bp | TCATTCTGTGCTCTTGACACAGTTCAGCAGTGCAATCCCATGTGCCAGCTCCATAGATGGTTCTTCCTCTaGAAAGACTTGCCGCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: SFCALDTVQQCNPMCQLHRWFFL*KDLPQV Trigger: GACCTGCGGCAAGTCTTTCAAGAGGAAGAACCATCT...ATGGAGCTGGCACATGGGATTGCACTGCTGAACTGTGTCAAGAGCACAGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043922.7 |
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| CDS GCA 72 bp | CAGCCGCTGCGGCGTCTCAGGTCCACCCAGGGGCCGTaGGCCTCGCCCAGGTACACGCGCCGCACGTCGTAC | + |
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Preference number: 6 (lower is better) Translates to: QPLRRLRSTQGP*ASPRYTRRTSY Trigger: GTACGACGTGCGGCGCGTGTACCTGGGCGAGGCGCACGGCCCCTGGGTGGACCTGAGACGCCGCAGCGGCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS TCA 72 bp | CGTGGCGACCGCTACGCTGGCCACGCTCCAGCGAAATaGGGTAGGCGGCAAGTTTGGCGTCGCTCCAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RGDRYAGHAPAK*GRRQVWRRSSR Trigger: GCGGCTGGAGCGACGCCAAACTTGCCGCCTACCTCATTTCGCTGGAGCGTGGCCAGCGTAGCGGTCGCCACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS GCA 72 bp | ACACACCACCGTCTCCAGGGCCTCAGGCCCGCTGCCTaGAGGGTTTTGGCACAGAGGGGTGCCCTGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: THHRLQGLRPAA*RVLAQRGALLS Trigger: GCTGAGCAGGGCACCCCTCTGTGCCAAAACCCTGCAGGCAGCGGGCCTGAGGCCCTGGAGACGGTGGTGTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS TCA 72 bp | AGGCTCCTCCGAGTCAGAGCTGGAGCCCGAGCTGGATaGGTCAGAGCTGCCAGCCACCAGGCCACTGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: RLLRVRAGARAG*VRAASHQATAH Trigger: GTGGGCAGTGGCCTGGTGGCTGGCAGCTCTGACTCATCCAGCTCGGGCTCCAGCTCTGACTCGGAGGAGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 72 bp | CAGGAGGCTCCTCCGAGTCAGAGCTGGAGCCCGAGCTaGATGAGTCAGAGCTGCCAGCCACCAGGCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: QEAPPSQSWSPS*MSQSCQPPGHC Trigger: GCAGTGGCCTGGTGGCTGGCAGCTCTGACTCATCCAGCTCGGGCTCCAGCTCTGACTCGGAGGAGCCTCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 72 bp | CTGGCTGGGTCTCAGGAGGCTCCTCCGAGTCAGAGCTaGAGCCCGAGCTGGATGAGTCAGAGCTGCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LAGSQEAPPSQS*SPSWMSQSCQP Trigger: TGGCTGGCAGCTCTGACTCATCCAGCTCGGGCTCCAGCTCTGACTCGGAGGAGCCTCCTGAGACCCAGCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS GCA 72 bp | CCGCTGCCTGCAGGGTTTTGGCACAGAGGGGTGCCCTaGTCAGCCAGGCTCTCCACATGGTGGACGTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: PLPAGFWHRGVP*SARLSTWWTSK Trigger: CTTTGACGTCCACCATGTGGAGAGCCTGGCTGAGCAGGGCACCCCTCTGTGCCAAAACCCTGCAGGCAGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 72 bp | GTGAGAGCTGCAGCAGCAGCTGAGGCTTTGGCTGGCTaGGTCTCAGGAGGCTCCTCCGAGTCAGAGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: VRAAAAAEALAG*VSGGSSESELE Trigger: CTCCAGCTCTGACTCGGAGGAGCCTCCTGAGACCCAGCCAGCCAAAGCCTCAGCTGCTGCTGCAGCTCTCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 72 bp | TCTCAAAGAGGGTGCCGGGGCCAGTGCCCACTTGCATaGGAACTGGCACACACACCACCGTCTCCAGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SQRGCRGQCPLA*ELAHTPPSPGP Trigger: AGGCCCTGGAGACGGTGGTGTGTGTGCCAGTTCCCATGCAAGTGGGCACTGGCCCCGGCACCCTCTTTGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 72 bp | CATTGCGCCGCCGCCTTTTCTTCCGCTTTGGCTTTTTaGGGACTTGCTCCCAAGGCTTCCCGTGGCGACCGC | + |
|
Preference number: 6 (lower is better) Translates to: HCAAAFSSALAF*GLAPKASRGDR Trigger: GCGGTCGCCACGGGAAGCCTTGGGAGCAAGTCCCCAAAAAGCCAAAGCGGAAGAAAAGGCGGCGGCGCAATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS GCA 72 bp | CCAGCAGGCCATCAGCATCCATCACACGTGACCGCTTaGTCCGCCGTCTCTTCTCGGGCTCCTTGGGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: PAGHQHPSHVTA*SAVSSRAPWES Trigger: AGATTCCCAAGGAGCCCGAGAAGAGACGGCGGAGCAAGCGGTCACGTGTGATGGATGCTGATGGCCTGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 72 bp | TTTGGCTTTTTGGGGACTTGCTCCCAAGGCTTCCCGTaGCGACCGCTACGCTGGCCACGCTCCAGCGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: FGFLGTCSQGFP*RPLRWPRSSEM Trigger: CATTTCGCTGGAGCGTGGCCAGCGTAGCGGTCGCCACGGGAAGCCTTGGGAGCAAGTCCCCAAAAAGCCAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CAA 90 bp | GTCCAGCCTCGCACTGCCACACAGCCGTTGTGTAAAGGCCAAAGGTaGGGTCAAGCTCAGCCAGGTGTGGCTCATACGGGCAGCGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VQPRTATQPLCKGQR*GQAQPGVAHTGSGV Trigger: AACACCGCTGCCCGTATGAGCCACACCTGGCTGAGCTTGACCCAACCTTTGGCCTTTACACAACGGCTGTGTGGCAGTGCGAGGCTGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS TCA 72 bp | GAACATCTCCAGCAGGCCATCAGCATCCATCACACGTaGCCGCTTGCTCCGCCGTCTCTTCTCGGGCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: EHLQQAISIHHT*PLAPPSLLGLL Trigger: AAGGAGCCCGAGAAGAGACGGCGGAGCAAGCGGTCACGTGTGATGGATGCTGATGGCCTGCTGGAGATGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 72 bp | TTCATGTGCCAATTGAGCGAAGCACGCTGCCGACACTaGTACCCGCATATCTCGCACTGCAGGGGCGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FMCQLSEARCRH*YPHISHCRGVS Trigger: GGAGACGCCCCTGCAGTGCGAGATATGCGGGTACCAGTGTCGGCAGCGTGCTTCGCTCAATTGGCACATGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CAA 90 bp | GATCCTGGAAGTAGCGGTGTCCAGCCTCGCACTGCCACACAGCCGTaGTGTAAAGGCCAAAGGTTGGGTCAAGCTCAGCCAGGTGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DPGSSGVQPRTATQP*CKGQRLGQAQPGVA Trigger: AGCCACACCTGGCTGAGCTTGACCCAACCTTTGGCCTTTACACAACGGCTGTGTGGCAGTGCGAGGCTGGACACCGCTACTTCCAGGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS TCA 72 bp | CCAGCTTCTCGAAGCGCTTCCCGCAGCGATCGCACGTaGAGTTGTACTGCACCTCGGCTGTGTGCTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PASRSASRSDRT*SCTAPRLCASS Trigger: TGAAGAAGCACACAGCCGAGGTGCAGTACAACTTCACGTGCGATCGCTGCGGGAAGCGCTTCGAGAAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 72 bp | GCACTGCCACACAGCCGTTGTGTAAAGGCCAAAGGTTaGGTCAAGCTCAGCCAGGTGTGGCTCATACGGGCA | + |
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Preference number: 6 (lower is better) Translates to: ALPHSRCVKAKG*VKLSQVWLIRA Trigger: TGCCCGTATGAGCCACACCTGGCTGAGCTTGACCCAACCTTTGGCCTTTACACAACGGCTGTGTGGCAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 72 bp | GCTGAGAGCCACATACACCTGGCTGCAGCCCTCGTATaGACAGTGGAACATCTCCAGCAGGCCATCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: AESHIHLAAALV*TVEHLQQAISI Trigger: GATGCTGATGGCCTGCTGGAGATGTTCCACTGTCCATACGAGGGCTGCAGCCAGGTGTATGTGGCTCTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CAA 72 bp | AGTAGCGGTGTCCAGCCTCGCACTGCCACACAGCCGTaGTGTAAAGGCCAAAGGTTGGGTCAAGCTCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSGVQPRTATQP*CKGQRLGQAQP Trigger: TGGCTGAGCTTGACCCAACCTTTGGCCTTTACACAACGGCTGTGTGGCAGTGCGAGGCTGGACACCGCTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CAA 72 bp | GGTTTGTGGTCCGGGTGGCTTTTGAGCGTGTGGAACTaGACACTGTCCAGCTTCTCGAAGCGCTTCCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLWSGWLLSVWN*TLSSFSKRFPQ Trigger: CTGCGGGAAGCGCTTCGAGAAGCTGGACAGTGTCAAGTTCCACACGCTCAAAAGCCACCCGGACCACAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CAA 90 bp | CTGTCCAGCTTCTCGAAGCGCTTCCCGCAGCGATCGCACGTGAAGTaGTACTGCACCTCGGCTGTGTGCTTCTTCATGTGCCAATTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSSFSKRFPQRSHVK*YCTSAVCFFMCQLS Trigger: GCTCAATTGGCACATGAAGAAGCACACAGCCGAGGTGCAGTACAACTTCACGTGCGATCGCTGCGGGAAGCGCTTCGAGAAGCTGGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS TCA 72 bp | ACTGCACCTCGGCTGTGTGCTTCTTCATGTGCCAATTaGGCGAAGCACGCTGCCGACACTGGTACCCGCATA | + |
|
Preference number: 6 (lower is better) Translates to: TAPRLCASSCAN*AKHAADTGTRI Trigger: TATGCGGGTACCAGTGTCGGCAGCGTGCTTCGCTCAATTGGCACATGAAGAAGCACACAGCCGAGGTGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS GCA 72 bp | GTGTGCTTCTTCATGTGCCAATTGAGCGAAGCACGCTaGCGACACTGGTACCCGCATATCTCGCACTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VCFFMCQLSEAR*RHWYPHISHCR Trigger: CCTGCAGTGCGAGATATGCGGGTACCAGTGTCGGCAGCGTGCTTCGCTCAATTGGCACATGAAGAAGCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 72 bp | TCAGCCAGGTGTGGCTCATACGGGCAGCGGTGTTTGTaGTCCTCATACCAGATGACCACGTTCTTCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SARCGSYGQRCL*SSYQMTTFFRQ Trigger: CTGCCTGAAGAACGTGGTCATCTGGTATGAGGACCACAAACACCGCTGCCCGTATGAGCCACACCTGGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CAA 72 bp | AGCTCAGCCAGGTGTGGCTCATACGGGCAGCGGTGTTaGTGGTCCTCATACCAGATGACCACGTTCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSARCGSYGQRC*WSSYQMTTFFR Trigger: CCTGAAGAACGTGGTCATCTGGTATGAGGACCACAAACACCGCTGCCCGTATGAGCCACACCTGGCTGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CAA 72 bp | TACTGCACCTCGGCTGTGTGCTTCTTCATGTGCCAATaGAGCGAAGCACGCTGCCGACACTGGTACCCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: YCTSAVCFFMCQ*SEARCRHWYPH Trigger: ATGCGGGTACCAGTGTCGGCAGCGTGCTTCGCTCAATTGGCACATGAAGAAGCACACAGCCGAGGTGCAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CAA 72 bp | TTCTCGAAGCGCTTCCCGCAGCGATCGCACGTGAAGTaGTACTGCACCTCGGCTGTGTGCTTCTTCATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: FSKRFPQRSHVK*YCTSAVCFFMC Trigger: GCACATGAAGAAGCACACAGCCGAGGTGCAGTACAACTTCACGTGCGATCGCTGCGGGAAGCGCTTCGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CAA 90 bp | GTTGGGTCAAGCTCAGCCAGGTGTGGCTCATACGGGCAGCGGTGTTaGTGGTCCTCATACCAGATGACCACGTTCTTCAGGCAGTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: VGSSSARCGSYGQRC*WSSYQMTTFFRQFT Trigger: TGTGAACTGCCTGAAGAACGTGGTCATCTGGTATGAGGACCACAAACACCGCTGCCCGTATGAGCCACACCTGGCTGAGCTTGACCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CAA 90 bp | GTGAAGTTGTACTGCACCTCGGCTGTGTGCTTCTTCATGTGCCAATaGAGCGAAGCACGCTGCCGACACTGGTACCCGCATATCTCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: VKLYCTSAVCFFMCQ*SEARCRHWYPHISH Trigger: GTGCGAGATATGCGGGTACCAGTGTCGGCAGCGTGCTTCGCTCAATTGGCACATGAAGAAGCACACAGCCGAGGTGCAGTACAACTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS GCA 72 bp | CGATCGCACGTGAAGTTGTACTGCACCTCGGCTGTGTaGTTCTTCATGTGCCAATTGAGCGAAGCACGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSHVKLYCTSAV*FFMCQLSEARC Trigger: GCAGCGTGCTTCGCTCAATTGGCACATGAAGAAGCACACAGCCGAGGTGCAGTACAACTTCACGTGCGATCG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS GCA 72 bp | AAGCGCTTCCCGCAGCGATCGCACGTGAAGTTGTACTaGACCTCGGCTGTGTGCTTCTTCATGTGCCAATTG | + |
|
Preference number: 6 (lower is better) Translates to: KRFPQRSHVKLY*TSAVCFFMCQL Trigger: CAATTGGCACATGAAGAAGCACACAGCCGAGGTGCAGTACAACTTCACGTGCGATCGCTGCGGGAAGCGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 72 bp | GTAAAGGCCAAAGGTTGGGTCAAGCTCAGCCAGGTGTaGCTCATACGGGCAGCGGTGTTTGTGGTCCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: VKAKGWVKLSQV*LIRAAVFVVLI Trigger: TATGAGGACCACAAACACCGCTGCCCGTATGAGCCACACCTGGCTGAGCTTGACCCAACCTTTGGCCTTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CCA 72 bp | CAGGTAGGTTTGTGGTCCGGGTGGCTTTTGAGCGTGTaGAACTTGACACTGTCCAGCTTCTCGAAGCGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QVGLWSGWLLSV*NLTLSSFSKRF Trigger: GAAGCGCTTCGAGAAGCTGGACAGTGTCAAGTTCCACACGCTCAAAAGCCACCCGGACCACAAACCTACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS TCA 72 bp | TCCTTGAGCATATACAGGTCCTCCTTCTCTACGGGGTaGCACGGGGTGGTGTCTTTCTTGGTCTCAATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLSIYRSSFSTG*HGVVSFLVSML Trigger: CAGCATTGAGACCAAGAAAGACACCACCCCGTGTCACCCCGTAGAGAAGGAGGACCTGTATATGCTCAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179605.9 |
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| CDS GCA 72 bp | TGTGGCGTCGCAGGTGGTTGGATAAATAAAACTTCTTaGCACAGCCAGGGTGAGGACACACTTTGGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CGVAGGWINKTS*HSQGEDTLWSS Trigger: GGAAGACCAAAGTGTGTCCTCACCCTGGCTGTGGCAAGAAGTTTTATTTATCCAACCACCTGCGACGCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS CAA 72 bp | TCATACCAGATGACCACGTTCTTCAGGCAGTTCACATaGCGCCGCCGCCTTTTCTTCCGCTTTGGCTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SYQMTTFFRQFT*RRRLFFRFGFL Trigger: CAAAAAGCCAAAGCGGAAGAAAAGGCGGCGGCGCAATGTGAACTGCCTGAAGAACGTGGTCATCTGGTATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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| CDS TCA 72 bp | GCCGTCTCTTCTCGGGCTCCTTGGGAATCTCATAGATaGTGGCTGACATTTCACTGCTGTCCAATTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: AVSSRAPWESHR*WLTFHCCPILL Trigger: GAGAAGAATTGGACAGCAGTGAAATGTCAGCCATCATCTATGAGATTCCCAAGGAGCCCGAGAAGAGACGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043922.7 ENSMUST00000179605.9 |
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