RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP651 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000013419

Ensembl transcript IDs: ENSMUST00000093772.4, ENSMUST00000214732.2

Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCCTGCCTGGCTCTCTGCCATGCCTGCAGCCCAGAGCTCCTCCTaGCCTGTATCGGCTGCCTCCAGCACCCCTCGCCTGGAGGGGTGC +
Preference number: 1 (lower is better)
Translates to: GPAWLSAMPAAQSSS*PVSAASSTPRLEGC
Trigger: GCACCCCTCCAGGCGAGGGGTGCTGGAGGCAGCCGATACAGGGCAGGAGGAGCTCTGGGCTGCAGGCATGGCAGAGAGCCAGGCAGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 90 bp CTCTGCCATGCCTGCAGCCCAGAGCTCCTCCTGCCCTGTATCGGCTaGCTCCAGCACCCCTCGCCTGGAGGGGTGCAGCCAACCAGTCCC +
Preference number: 1 (lower is better)
Translates to: LCHACSPELLLPCIG*LQHPSPGGVQPTSP
Trigger: GGGACTGGTTGGCTGCACCCCTCCAGGCGAGGGGTGCTGGAGGCAGCCGATACAGGGCAGGAGGAGCTCTGGGCTGCAGGCATGGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 90 bp TCTGCCAGCCCCTTGGGCACAGGCCTCTTCCAAGTGTGGCCATGCTaGGAGCGGCTGGGAGCAGCAGGGAGCGGCGGGAGGGGTGTAAGG +
Preference number: 1 (lower is better)
Translates to: SASPLGTGLFQVWPC*ERLGAAGSGGRGVR
Trigger: CCTTACACCCCTCCCGCCGCTCCCTGCTGCTCCCAGCCGCTCCCAGCATGGCCACACTTGGAAGAGGCCTGTGCCCAAGGGGCTGGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 90 bp ATCTCCAAGAAGCTGCACCAGGACCCAGGGCCACGGGTATCCAGCTaGAGCCCAGCTCCTAGTCTGTGTCTGCTGGCCCTGGCCAAGAGG +
Preference number: 1 (lower is better)
Translates to: ISKKLHQDPGPRVSS*SPAPSLCLLALAKR
Trigger: CCTCTTGGCCAGGGCCAGCAGACACAGACTAGGAGCTGGGCTGCAGCTGGATACCCGTGGCCCTGGGTCCTGGTGCAGCTTCTTGGAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 90 bp CAGTCACACATGGTATCCTGCCATGCCTCCCCGGCCACAGGCCTCTaGGGCTCCAGAACTCCTTCAACGGGGCACACCCAAATCCTCCCC +
Preference number: 1 (lower is better)
Translates to: QSHMVSCHASPATGL*GSRTPSTGHTQILP
Trigger: GGGGAGGATTTGGGTGTGCCCCGTTGAAGGAGTTCTGGAGCCCCAGAGGCCTGTGGCCGGGGAGGCATGGCAGGATACCATGTGTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 90 bp GGAAAGGGTGCCTATACAGGGACAACAGCTCATTCAACCCTTCCGTaGCCAGAAGACAGCCGACTCAGCCGAGCACCTTGGGCCTGCCCA +
Preference number: 1 (lower is better)
Translates to: GKGAYTGTTAHSTLP*PEDSRLSRAPWACP
Trigger: TGGGCAGGCCCAAGGTGCTCGGCTGAGTCGGCTGTCTTCTGGGCACGGAAGGGTTGAATGAGCTGTTGTCCCTGTATAGGCACCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 90 bp GGAGCCTGGAGCCCAACCTCAGGCAGTGGGGCAGGAGTATGCAAATaGGTAACCTTCCTTTCTCAGAGAGGGAGGGTCCCACCTGTCTCC +
Preference number: 1 (lower is better)
Translates to: GAWSPTSGSGAGVCK*VTFLSQRGRVPPVS
Trigger: GGAGACAGGTGGGACCCTCCCTCTCTGAGAAAGGAAGGTTACCCATTTGCATACTCCTGCCCCACTGCCTGAGGTTGGGCTCCAGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 90 bp CCATGGGCGTGTCACACACAGGCAGGCAGTAAGGCTTCACACACCTaGGCCTGGTCTTCCTGTTATCACCCAGACCCCAGTGAGGGGATG +
Preference number: 1 (lower is better)
Translates to: PWACHTQAGSKASHT*AWSSCYHPDPSEGM
Trigger: CATCCCCTCACTGGGGTCTGGGTGATAACAGGAAGACCAGGCCCAGGTGTGTGAAGCCTTACTGCCTGCCTGTGTGTGACACGCCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 90 bp CCCTGCTCCCACAGAGGCCTAAACACATCAGCTTCTCTCCCTGGCTaGACTGTGGCACCCCAGACTGTACAAGAGTGCAAGAGGGACCAG +
Preference number: 1 (lower is better)
Translates to: PCSHRGLNTSASLPG*TVAPQTVQECKRDQ
Trigger: CTGGTCCCTCTTGCACTCTTGTACAGTCTGGGGTGCCACAGTGCAGCCAGGGAGAGAAGCTGATGTGTTTAGGCCTCTGTGGGAGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR TCA 90 bp TTCACACACCTGGGCCTGGTCTTCCTGTTATCACCCAGACCCCAGTaGGGGGATGTGGGACTGGGCATCCCTGGGTTCCAGGTCTTCTAT +
Preference number: 1 (lower is better)
Translates to: FTHLGLVFLLSPRPQ*GDVGLGIPGFQVFY
Trigger: ATAGAAGACCTGGAACCCAGGGATGCCCAGTCCCACATCCCCTCACTGGGGTCTGGGTGATAACAGGAAGACCAGGCCCAGGTGTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 90 bp GGGCTAAGGGCATGCTTGCAGCCTGCTCCTCAGGCTAGGAAAGGGTaGCTATACAGGGACAACAGCTCATTCAACCCTTCCGTGCCCAGA +
Preference number: 1 (lower is better)
Translates to: GLRACLQPAPQARKG*LYRDNSSFNPSVPR
Trigger: TCTGGGCACGGAAGGGTTGAATGAGCTGTTGTCCCTGTATAGGCACCCTTTCCTAGCCTGAGGAGCAGGCTGCAAGCATGCCCTTAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 90 bp CCATGTCTCATTCTCCTTGTATCCAGCAGGCCTCAGAACCAGGCGTaGACAGATGAGGCGTGGCCTTCCCAACCAGGCCAGTCAGCAGAA +
Preference number: 1 (lower is better)
Translates to: PCLILLVSSRPQNQA*TDEAWPSQPGQSAE
Trigger: TTCTGCTGACTGGCCTGGTTGGGAAGGCCACGCCTCATCTGTGCACGCCTGGTTCTGAGGCCTGCTGGATACAAGGAGAATGAGACATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 90 bp AGCTCCCTGCTCCCACAGAGGCCTAAACACATCAGCTTCTCTCCCTaGCTGCACTGTGGCACCCCAGACTGTACAAGAGTGCAAGAGGGA +
Preference number: 1 (lower is better)
Translates to: SSLLPQRPKHISFSP*LHCGTPDCTRVQEG
Trigger: TCCCTCTTGCACTCTTGTACAGTCTGGGGTGCCACAGTGCAGCCAGGGAGAGAAGCTGATGTGTTTAGGCCTCTGTGGGAGCAGGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 90 bp CCACATCATGGGGATGGGGGCTTATTGCATTTGGCAGTTAGGGAGTaGAACCTTTGTGGGCAGGGCAGGGAGTGTAGCACCAGGCACACA +
Preference number: 1 (lower is better)
Translates to: PHHGDGGLLHLAVRE*NLCGQGRECSTRHT
Trigger: TGTGTGCCTGGTGCTACACTCCCTGCCCTGCCCACAAAGGTTGCACTCCCTAACTGCCAAATGCAATAAGCCCCCATCCCCATGATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 90 bp TGGGATTTCAGGCATACCCTCAGCCCAGTAGACTGCCTGGCAACCTaGCATCAGGAGACTCAGCACCAAGGTGCAGGAGAGGGTATAGTT +
Preference number: 1 (lower is better)
Translates to: WDFRHTLSPVDCLAT*HQETQHQGAGEGIV
Trigger: AACTATACCCTCTCCTGCACCTTGGTGCTGAGTCTCCTGATGCCAGGTTGCCAGGCAGTCTACTGGGCTGAGGGTATGCCTGAAATCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 90 bp GCCTTGAAGGAGAAAGACTGGTCCTATGGATACCCTAAATACTCTTaGGACTTGTGCACTGGGATGCTGGGACACCTGCCACCCTTCCTC +
Preference number: 1 (lower is better)
Translates to: ALKEKDWSYGYPKYS*DLCTGMLGHLPPFL
Trigger: GAGGAAGGGTGGCAGGTGTCCCAGCATCCCAGTGCACAAGTCCCAAGAGTATTTAGGGTATCCATAGGACCAGTCTTTCTCCTTCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 90 bp GGTCCTATGGATACCCTAAATACTCTTGGGACTTGTGCACTGGGATaGTGGGACACCTGCCACCCTTCCTCAGGACAGCAACACATAAAG +
Preference number: 1 (lower is better)
Translates to: GPMDTLNTLGTCALG*WDTCHPSSGQQHIK
Trigger: CTTTATGTGTTGCTGTCCTGAGGAAGGGTGGCAGGTGTCCCAGCATCCCAGTGCACAAGTCCCAAGAGTATTTAGGGTATCCATAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 90 bp GATCACACCGTAGAGATCTTCCACCTATGTCCCCAGGGCCCAGAATaGCACCAAACAGAACATGAGCAGCAGGAAGTACCTATGAGAACC +
Preference number: 1 (lower is better)
Translates to: DHTVEIFHLCPQGPE*HQTEHEQQEVPMRT
Trigger: GGTTCTCATAGGTACTTCCTGCTGCTCATGTTCTGTTTGGTGGCATTCTGGGCCCTGGGGACATAGGTGGAAGATCTCTACGGTGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 90 bp CAGAACCTAAGGGGCTGGAAATGTTCTAGATGCCTGATTTCTCTCTaGCGCCCACAGCCTATTTATTACCCGGGGCCCTGTTTGAAAGCA +
Preference number: 1 (lower is better)
Translates to: QNLRGWKCSRCLISL*RPQPIYYPGPCLKA
Trigger: TGCTTTCAAACAGGGCCCCGGGTAATAAATAGGCTGTGGGCGGCAGAGAGAAATCAGGCATCTAGAACATTTCCAGCCCCTTAGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR TCA 90 bp TGTTTGAAAGCAGCAGCACTGAAGCAAAGGACAGGAGCGCAGAGGTaGGAGAAAACAACAGGATCCTCCCAAGAAGTCCTTTCCTTAGGC +
Preference number: 1 (lower is better)
Translates to: CLKAAALKQRTGAQR*EKTTGSSQEVLSLG
Trigger: GCCTAAGGAAAGGACTTCTTGGGAGGATCCTGTTGTTTTCTCTCACCTCTGCGCTCCTGTCCTTTGCTTCAGTGCTGCTGCTTTCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR TCA 90 bp GAAAACAACAGGATCCTCCCAAGAAGTCCTTTCCTTAGGCCTTTGTaGGACTGGGTGTCAATTCCAAATGGCAGGCTGTCCTGGAACTAT +
Preference number: 1 (lower is better)
Translates to: ENNRILPRSPFLRPL*DWVSIPNGRLSWNY
Trigger: ATAGTTCCAGGACAGCCTGCCATTTGGAATTGACACCCAGTCTCACAAAGGCCTAAGGAAAGGACTTCTTGGGAGGATCCTGTTGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 90 bp GTCAATTCCAAATGGCAGGCTGTCCTGGAACTATGTGGCAATGGGTaGCTTTTAACTCCTAATCCTCTTGCCTCCCAAATGCTGGTGTTA +
Preference number: 1 (lower is better)
Translates to: VNSKWQAVLELCGNG*LLTPNPLASQMLVL
Trigger: TAACACCAGCATTTGGGAGGCAAGAGGATTAGGAGTTAAAAGCCACCCATTGCCACATAGTTCCAGGACAGCCTGCCATTTGGAATTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp CAGCCCCTTGGGCACAGGCCTCTTCCAAGTGTGGCCATGCTGGGAGCGGCTGGGCCACCTGCCCCAGTCTaGCCCACACAGAGGGGCAGC +
Preference number: 2 (lower is better)
Translates to: QPLGHRPLPSVAMLGAAGPPAPV*PTQRGS
Trigger: GCTGCCCCTCTGTGTGGGGCAGACTGGGGCAGGTGG...CCCAGCCGCTCCCAGCATGGCCACACTTGGAAGAGGCCTGTGCCCAAGGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp GGTGGCGATCACGTCCGAATCTCCACAGGCAGCCACCTCACCCACAACATCCCGGGGCCAGCCCCCACCTaGCCCAGTCTGCCCCACACA +
Preference number: 2 (lower is better)
Translates to: GGDHVRISTGSHLTHNIPGPAPT*PSLPHT
Trigger: TGTGTGGGGCAGACTGGGGCAGGTGGGGGCTGGCCC...CGGGATGTTGTGGGTGAGGTGGCTGCCTGTGGAGATTCGGACGTGATCGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp GGGCTGAGCTGGCGGATGAAAGGGGAGGGGCCTACTGTCTGGGCTCCTGTGACTCCTCGCCTGGAGGGGTaGAGCCAACCAGTCCCTCTC +
Preference number: 2 (lower is better)
Translates to: GLSWRMKGEGPTVWAPVTPRLEG*SQPVPL
Trigger: GAGAGGGACTGGTTGGCTGCACCCCTCCAGGCGAGG...AGTCACAGGAGCCCAGACAGTAGGCCCCTCCCCTTTCATCCGCCAGCTCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp GGGCTGAGCTGGCGGATGAAAGGGGAGGGGCCTACTGTCTGGGCTCCTGTGACTGACCCAGGCCCTGCCTaGCTCTCTGCCATGCCTGCA +
Preference number: 2 (lower is better)
Translates to: GLSWRMKGEGPTVWAPVTDPGPA*LSAMPA
Trigger: TGCAGGCATGGCAGAGAGCCAGGCAGGGCCTGGGTC...AGTCACAGGAGCCCAGACAGTAGGCCCCTCCCCTTTCATCCGCCAGCTCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp CTGCTCCCAAGACCAGAGCAGCCTGCACCAGTTGAGAGGCACAGGCCCAGGGCTGGCAGGGATGCCCTGTaGACAGCTCCCCATCCCCTG +
Preference number: 2 (lower is better)
Translates to: LLPRPEQPAPVERHRPRAGRDAL*TAPHPL
Trigger: CAGGGGATGGGGAGCTGTCCACAGGGCATCCCTGCC...AGCCCTGGGCCTGTGCCTCTCAACTGGTGCAGGCTGCTCTGGTCTTGGGAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp TCAGATGCCTACTGTCCCCACCCTGGGACCATGGGCGTGTCACACACAGGCAGGGGGGCGGTAGTGGCCTaGCCCCAAGAGGAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: SDAYCPHPGTMGVSHTGRGAVVA*PQEERR
Trigger: CCTCCTCTCCTCTTGGGGCCAGGCCACTACCGCCCC...CCTGCCTGTGTGTGACACGCCCATGGTCCCAGGGTGGGGACAGTAGGCATCTGA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp TCAACCCTTCCGTGCCCAGAAGACAGCCGACTCAGCCGAGCACCTTGGGCCTGCGGTAAGGGGCAGGGATaGCCTGTGGACAGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: STLPCPEDSRLSRAPWACGKGQG*PVDSSP
Trigger: TGGGGAGCTGTCCACAGGGCATCCCTGCCCCTTACC...GCAGGCCCAAGGTGCTCGGCTGAGTCGGCTGTCTTCTGGGCACGGAAGGGTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR TCA 90 bp TCAACCCTTCCGTGCCCAGAAGACAGCCGACTCAGCCGAGCACCTTGGGCCTGCAGCTCAGTGGGCCTCTaGGGAGGTCAAGGGATTCGG +
Preference number: 2 (lower is better)
Translates to: STLPCPEDSRLSRAPWACSSVGL*GGQGIR
Trigger: CCGAATCCCTTGACCTCCTCAGAGGCCCACTGAGCT...GCAGGCCCAAGGTGCTCGGCTGAGTCGGCTGTCTTCTGGGCACGGAAGGGTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR TCA 90 bp CTGTCATTCTGGGCCACCAAAGCCTCTCCCACAGACCTCACAGGGTCACAGGTGGCAGCCTGCACCAGTTaGGAGGCACAGGCCCAGGGC +
Preference number: 2 (lower is better)
Translates to: LSFWATKASPTDLTGSQVAACTS*EAQAQG
Trigger: GCCCTGGGCCTGTGCCTCTCAACTGGTGCAGGCTGC...CACCTGTGACCCTGTGAGGTCTGTGGGAGAGGCTTTGGTGGCCCAGAATGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp GGGCTGAGCTGGCGGATGAAAGGGGAGGGGCCTACTGTCTGGGCTCCTGTGACTTCAGAGAGAGGGCTGTaGCCCCATCCCAGACAGAGC +
Preference number: 2 (lower is better)
Translates to: GLSWRMKGEGPTVWAPVTSERGL*PHPRQS
Trigger: GCTCTGTCTGGGATGGGGGCACAGCCCTCTCTCTGA...AGTCACAGGAGCCCAGACAGTAGGCCCCTCCCCTTTCATCCGCCAGCTCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp CTGCTCCCAAGACCAGAGCAGCCTGCACCAGTTGAGAGGCACAGGCCCAGGGCTCTAGTCTGTGTCTGCTaGCCCTGGCCAAGAGGGCCT +
Preference number: 2 (lower is better)
Translates to: LLPRPEQPAPVERHRPRALVCVC*PWPRGP
Trigger: AGGCCCTCTTGGCCAGGGCCAGCAGACACAGACTAG...AGCCCTGGGCCTGTGCCTCTCAACTGGTGCAGGCTGCTCTGGTCTTGGGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp CCAGCCCCTTGGGCACAGGCCTCTTCCAAGTGTGGCCATGCTGGGAGCGGCTGGCAGGGAAGCCAGGAATaGGCAGGTGAAACTGACCCA +
Preference number: 2 (lower is better)
Translates to: PAPWAQASSKCGHAGSGWQGSQE*AGETDP
Trigger: TGGGTCAGTTTCACCTGCCCATTCCTGGCTTCCCTG...CCAGCCGCTCCCAGCATGGCCACACTTGGAAGAGGCCTGTGCCCAAGGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp TCAACCCTTCCGTGCCCAGAAGACAGCCGACTCAGCCGAGCACCTTGGGCCTGCTCCCCTCTGGAGGCTTaGTCTCCAGCACCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: STLPCPEDSRLSRAPWACSPLEA*SPAPRD
Trigger: GTCTCTGGGTGCTGGAGACCAAGCCTCCAGAGGGGA...GCAGGCCCAAGGTGCTCGGCTGAGTCGGCTGTCTTCTGGGCACGGAAGGGTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR TCA 90 bp GCTGGAGACCCAACTCCTGTGACAGGGTTCCGTTCCCAGCCTCTGCCCTTCAGACCTGAACTACTTGCCTaGGGCTCCTGTGGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: AGDPTPVTGFRSQPLPFRPELLA*GSCGAP
Trigger: AGGGGCCCCACAGGAGCCTCAGGCAAGTAGTTCAGG...TCTGAAGGGCAGAGGCTGGGAACGGAACCCTGTCACAGGAGTTGGGTCTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp TCAGATGCCTACTGTCCCCACCCTGGGACCATGGGCGTGTCACACACAGGCAGGCAGCTCCCCATCCCCTaGCCCACAGATAGCACCATG +
Preference number: 2 (lower is better)
Translates to: SDAYCPHPGTMGVSHTGRQLPIP*PTDSTM
Trigger: CATGGTGCTATCTGTGGGGCAGGGGATGGGGAGCTG...CCTGCCTGTGTGTGACACGCCCATGGTCCCAGGGTGGGGACAGTAGGCATCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp GGTGGCGATCACGTCCGAATCTCCACAGGCAGCCACCTCACCCACAACATCCCGGCTTCTCTCCCTGGCTaGACTGTGGCACCCCAGACT +
Preference number: 2 (lower is better)
Translates to: GGDHVRISTGSHLTHNIPASLPG*TVAPQT
Trigger: AGTCTGGGGTGCCACAGTGCAGCCAGGGAGAGAAGC...CGGGATGTTGTGGGTGAGGTGGCTGCCTGTGGAGATTCGGACGTGATCGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp TCAACCCTTCCGTGCCCAGAAGACAGCCGACTCAGCCGAGCACCTTGGGCCTGCATCAGCTTCTCTCCCTaGCTGCACTGTGGCACCCCA +
Preference number: 2 (lower is better)
Translates to: STLPCPEDSRLSRAPWACISFSP*LHCGTP
Trigger: TGGGGTGCCACAGTGCAGCCAGGGAGAGAAGCTGAT...GCAGGCCCAAGGTGCTCGGCTGAGTCGGCTGTCTTCTGGGCACGGAAGGGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp GCTGGAGACCCAACTCCTGTGACAGGGTTCCGTTCCCAGCCTCTGCCCTTCAGACCTCTGCCAGCCCCTTaGGCACAGGCCTCTTCCAAG +
Preference number: 2 (lower is better)
Translates to: AGDPTPVTGFRSQPLPFRPLPAP*AQASSK
Trigger: CTTGGAAGAGGCCTGTGCCCAAGGGGCTGGCAGAGG...TCTGAAGGGCAGAGGCTGGGAACGGAACCCTGTCACAGGAGTTGGGTCTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp GCTGGAGACCCAACTCCTGTGACAGGGTTCCGTTCCCAGCCTCTGCCCTTCAGACTCACTGCAGGAGCCTaGAGCCCAACCTCAGGCAGT +
Preference number: 2 (lower is better)
Translates to: AGDPTPVTGFRSQPLPFRLTAGA*SPTSGS
Trigger: ACTGCCTGAGGTTGGGCTCCAGGCTCCTGCAGTGAG...TCTGAAGGGCAGAGGCTGGGAACGGAACCCTGTCACAGGAGTTGGGTCTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp AGTCCCAGTGCAGGGTGGGGATTCCTGTACCTGCCTGGTAGGGATGTAAGAAAGCTGCCCTGTATCGGCTaGCTCCAGCACCCCTCGCCT +
Preference number: 2 (lower is better)
Translates to: SPSAGWGFLYLPGRDVRKLPCIG*LQHPSP
Trigger: AGGCGAGGGGTGCTGGAGGCAGCCGATACAGGGCAG...CTTTCTTACATCCCTACCAGGCAGGTACAGGAATCCCCACCCTGCACTGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp CGACTCAGCCGAGCACCTTGGGCCTGCCCACACCTGTACAGAATAAAGTGCTTCCATGGTATCCTGCCATaGCTCCCCGGCCACAGGCCT +
Preference number: 2 (lower is better)
Translates to: RLSRAPWACPHLYRIKCFHGILP*LPGHRP
Trigger: AGGCCTGTGGCCGGGGAGGCATGGCAGGATACCATG...GAAGCACTTTATTCTGTACAGGTGTGGGCAGGCCCAAGGTGCTCGGCTGAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR TCA 90 bp GGGCTGAGCTGGCGGATGAAAGGGGAGGGGCCTACTGTCTGGGCTCCTGTGACTCCACAGATAGCACCATaGAACCCTGAACTACTTGCC +
Preference number: 2 (lower is better)
Translates to: GLSWRMKGEGPTVWAPVTPQIAP*NPELLA
Trigger: GGCAAGTAGTTCAGGGTTTCATGGTGCTATCTGTGG...AGTCACAGGAGCCCAGACAGTAGGCCCCTCCCCTTTCATCCGCCAGCTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp CGACTCAGCCGAGCACCTTGGGCCTGCCCACACCTGTACAGAATAAAGTGCTTCTTCCAAGTGTGGCCATaGTGGGAGCGGCTGGGAGCA +
Preference number: 2 (lower is better)
Translates to: RLSRAPWACPHLYRIKCFFQVWP*WERLGA
Trigger: TGCTCCCAGCCGCTCCCAGCATGGCCACACTTGGAA...GAAGCACTTTATTCTGTACAGGTGTGGGCAGGCCCAAGGTGCTCGGCTGAGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp GCATTGCTAGGCTACAGCCCATGTCTCATTCTCCTTGTATCCAGCAGGCCTCAGGCGGGGCTAAGGGCATaGTTGCAGCCTGCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: ALLGYSPCLILLVSSRPQAGLRA*LQPAPQ
Trigger: CTGAGGAGCAGGCTGCAAGCATGCCCTTAGCCCCGC...CTGAGGCCTGCTGGATACAAGGAGAATGAGACATGGGCTGTAGCCTAGCAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp CTGCTCCCAAGACCAGAGCAGCCTGCACCAGTTGAGAGGCACAGGCCCAGGGCTACTGTGTCTCGGGCCTaGAAAATTACCACCATGTTC +
Preference number: 2 (lower is better)
Translates to: LLPRPEQPAPVERHRPRATVSRA*KITTMF
Trigger: GAACATGGTGGTAATTTTCCAGGCCCGAGACACAGT...AGCCCTGGGCCTGTGCCTCTCAACTGGTGCAGGCTGCTCTGGTCTTGGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 90 bp AACACAGCGAACAGCCGTGTCACAGCAAGGGAGGGCCGCAGAGCATaGCTAGGCTACAGCCCATGTCTCATTCTCCTTGTATCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: NTANSRVTAREGRRA*LGYSPCLILLVSSR
Trigger: CCTGCTGGATACAAGGAGAATGAGACATGGGCTGTAGCCTAGCAATGCTCTGCGGCCCTCCCTTGCTGTGACACGGCTGTTCGCTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR TCA 90 bp GCATTGCTAGGCTACAGCCCATGTCTCATTCTCCTTGTATCCAGCAGGCCTCAGGCAGGGAAGAGTCCCTaGGGACATCACGGAAGCCCA +
Preference number: 2 (lower is better)
Translates to: ALLGYSPCLILLVSSRPQAGKSP*GHHGSP
Trigger: TGGGCTTCCGTGATGTCCTCAGGGACTCTTCCCTGC...CTGAGGCCTGCTGGATACAAGGAGAATGAGACATGGGCTGTAGCCTAGCAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp CGACTCAGCCGAGCACCTTGGGCCTGCCCACACCTGTACAGAATAAAGTGCTTCAAATCTCCAAGAAGCTaGACCAGGACCCAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: RLSRAPWACPHLYRIKCFKSPRS*TRTQGH
Trigger: GTGGCCCTGGGTCCTGGTGCAGCTTCTTGGAGATTT...GAAGCACTTTATTCTGTACAGGTGTGGGCAGGCCCAAGGTGCTCGGCTGAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp CGACTCAGCCGAGCACCTTGGGCCTGCCCACACCTGTACAGAATAAAGTGCTTCGGGATCTCATTCTCCTaGAGGAGCCCTAGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: RLSRAPWACPHLYRIKCFGISFS*RSPRSW
Trigger: CCAGCTTCTAGGGCTCCTGCAGGAGAATGAGATCCC...GAAGCACTTTATTCTGTACAGGTGTGGGCAGGCCCAAGGTGCTCGGCTGAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp TTTGAAAGCAGCAGCACTGAAGCAAAGGACAGGAGCGCAGAGGTGAGAGAAAACGGATTCGGCACCCTCTaGCAGCCCCTTGGGCACAGG +
Preference number: 2 (lower is better)
Translates to: FESSSTEAKDRSAEVRENGFGTL*QPLGHR
Trigger: CCTGTGCCCAAGGGGCTGGCAGAGGGTGCCGAATCC...GTTTTCTCTCACCTCTGCGCTCCTGTCCTTTGCTTCAGTGCTGCTGCTTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp GGGCTGAGCTGGCGGATGAAAGGGGAGGGGCCTACTGTCTGGGCTCCTGTGACTATTCTCTCCTGGATGTaGGGCTCTTTAAAAGTCCCA +
Preference number: 2 (lower is better)
Translates to: GLSWRMKGEGPTVWAPVTILSWM*GSLKVP
Trigger: TGGGACTTTTAAAGAGCCCCACATCCAGGAGAGAAT...AGTCACAGGAGCCCAGACAGTAGGCCCCTCCCCTTTCATCCGCCAGCTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp TTTGAAAGCAGCAGCACTGAAGCAAAGGACAGGAGCGCAGAGGTGAGAGAAAACTGCCTGAGGCTCCTGTaGGGCCCCTCCCTGGGATCT +
Preference number: 2 (lower is better)
Translates to: FESSSTEAKDRSAEVRENCLRLL*GPSLGS
Trigger: AGATCCCAGGGAGGGGCCCCACAGGAGCCTCAGGCA...GTTTTCTCTCACCTCTGCGCTCCTGTCCTTTGCTTCAGTGCTGCTGCTTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp TTTGAAAGCAGCAGCACTGAAGCAAAGGACAGGAGCGCAGAGGTGAGAGAAAACCCTGGCTCTCTGCCATaGCTGCAGCCCAGAGCTCCT +
Preference number: 2 (lower is better)
Translates to: FESSSTEAKDRSAEVRENPGSLP*LQPRAP
Trigger: AGGAGCTCTGGGCTGCAGGCATGGCAGAGAGCCAGG...GTTTTCTCTCACCTCTGCGCTCCTGTCCTTTGCTTCAGTGCTGCTGCTTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp TTTGAAAGCAGCAGCACTGAAGCAAAGGACAGGAGCGCAGAGGTGAGAGAAAACCCGGCCACAGGCCTCTaGGGCTCCAGAACTCCTTCA +
Preference number: 2 (lower is better)
Translates to: FESSSTEAKDRSAEVRENPATGL*GSRTPS
Trigger: TGAAGGAGTTCTGGAGCCCCAGAGGCCTGTGGCCGG...GTTTTCTCTCACCTCTGCGCTCCTGTCCTTTGCTTCAGTGCTGCTGCTTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp GCATTGCTAGGCTACAGCCCATGTCTCATTCTCCTTGTATCCAGCAGGCCTCAGAGTCCCAGTGCAGGGTaGGGATTCCTGTACCTGCCT +
Preference number: 2 (lower is better)
Translates to: ALLGYSPCLILLVSSRPQSPSAG*GFLYLP
Trigger: AGGCAGGTACAGGAATCCCCACCCTGCACTGGGACT...CTGAGGCCTGCTGGATACAAGGAGAATGAGACATGGGCTGTAGCCTAGCAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 90 bp TTCAACCCTTCCGTGCCCAGAAGACAGCCGACTCAGCCGAGCACCTaGGGCCTGCCCACACCTGTACAGAATAAAGTGCTTCGTTTATTG +
Preference number: 2 (lower is better)
Translates to: FNPSVPRRQPTQPST*GLPTPVQNKVLRLL
Trigger: CAATAAACGAAGCACTTTATTCTGTACAGGTGTGGGCAGGCCCAAGGTGCTCGGCTGAGTCGGCTGTCTTCTGGGCACGGAAGGGTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 90 bp CCAACTCCTGTGACAGGGTTCCGTTCCCAGCCTCTGCCCTTCAGATaGCTGTTTACTGAGGAATGGCCAGGGTTTCTGGACCCAAGAAGT +
Preference number: 2 (lower is better)
Translates to: PTPVTGFRSQPLPFR*LFTEEWPGFLDPRS
Trigger: ACTTCTTGGGTCCAGAAACCCTGGCCATTCCTCAGTAAACAGCAATCTGAAGGGCAGAGGCTGGGAACGGAACCCTGTCACAGGAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 90 bp ACCAAAGCCTCTCCCACAGACCTCACAGGGTCACAGGTGATGTCATaGAAGCAGGGATGGCTTGTCATAGCAGTGGGATCCAGCTTCACC +
Preference number: 2 (lower is better)
Translates to: TKASPTDLTGSQVMS*KQGWLVIAVGSSFT
Trigger: GGTGAAGCTGGATCCCACTGCTATGACAAGCCATCCCTGCTTCAATGACATCACCTGTGACCCTGTGAGGTCTGTGGGAGAGGCTTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR TCA 90 bp TCAGATGCCTACTGTCCCCACCCTGGGACCATGGGCGTGTCACACACAGGCAGGGTAAGGTGCAGAGTGTaGCAAAGAAGCTTATCAACA +
Preference number: 2 (lower is better)
Translates to: SDAYCPHPGTMGVSHTGRVRCRV*QRSLST
Trigger: TGTTGATAAGCTTCTTTGTCACACTCTGCACCTTAC...CCTGCCTGTGTGTGACACGCCCATGGTCCCAGGGTGGGGACAGTAGGCATCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR TCA 90 bp GCATTGCTAGGCTACAGCCCATGTCTCATTCTCCTTGTATCCAGCAGGCCTCAGATGTTAAGCCAGCTCTaGAGAGCTGCCAGGCACTGG +
Preference number: 2 (lower is better)
Translates to: ALLGYSPCLILLVSSRPQMLSQL*RAARHW
Trigger: CCAGTGCCTGGCAGCTCTTCAGAGCTGGCTTAACAT...CTGAGGCCTGCTGGATACAAGGAGAATGAGACATGGGCTGTAGCCTAGCAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp TCCTCCTGTCTCAGTTCTCATCTACCTGGGATTTCAGGCATACCCTCAGCCCAGAGACTCCCCATCAACTaGTCCCAAGACCAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: SSCLSSHLPGISGIPSAQRLPIN*SQDQSS
Trigger: GCTGCTCTGGTCTTGGGAGCAGTTGATGGGGAGTCT...CTGGGCTGAGGGTATGCCTGAAATCCCAGGTAGATGAGAACTGAGACAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp GCATTGCTAGGCTACAGCCCATGTCTCATTCTCCTTGTATCCAGCAGGCCTCAGGGTTTTTCTCCCCTCTaGAGGCTTGGTCTCCAGCAC +
Preference number: 2 (lower is better)
Translates to: ALLGYSPCLILLVSSRPQGFSPL*RLGLQH
Trigger: GTGCTGGAGACCAAGCCTCCAGAGGGGAGAAAAACC...CTGAGGCCTGCTGGATACAAGGAGAATGAGACATGGGCTGTAGCCTAGCAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp TCCTCCTGTCTCAGTTCTCATCTACCTGGGATTTCAGGCATACCCTCAGCCCAGCAGGCTAGGAAAGGGTaGCTATACAGGGACAACAGC +
Preference number: 2 (lower is better)
Translates to: SSCLSSHLPGISGIPSAQQARKG*LYRDNS
Trigger: GCTGTTGTCCCTGTATAGGCACCCTTTCCTAGCCTG...CTGGGCTGAGGGTATGCCTGAAATCCCAGGTAGATGAGAACTGAGACAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp CTGTCATTCTGGGCCACCAAAGCCTCTCCCACAGACCTCACAGGGTCACAGGTGCTCTTGCCTCCCAAATaGTGGTGTTACAGGTATGTT +
Preference number: 2 (lower is better)
Translates to: LSFWATKASPTDLTGSQVLLPPK*WCYRYV
Trigger: AACATACCTGTAACACCAGCATTTGGGAGGCAAGAG...CACCTGTGACCCTGTGAGGTCTGTGGGAGAGGCTTTGGTGGCCCAGAATGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp TTCCAGGTCTTCTATGTCTTCATGAAGACTCCCCATCAACTGCTCCCAAGACCAAGAGGAGGCCTCATGTaGGCTTCTGGGGGAGCAGAC +
Preference number: 2 (lower is better)
Translates to: FQVFYVFMKTPHQLLPRPRGGLM*ASGGAD
Trigger: GTCTGCTCCCCCAGAAGCCCACATGAGGCCTCCTCT...TGGTCTTGGGAGCAGTTGATGGGGAGTCTTCATGAAGACATAGAAGACCTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 90 bp ACCTTGGGCCTGCCCACACCTGTACAGAATAAAGTGCTTCGTTTATaGATGATTAAAATGTCCCCAGCCCGCTGTCCCAGCTCAGTGGGC +
Preference number: 2 (lower is better)
Translates to: TLGLPTPVQNKVLRL*MIKMSPARCPSSVG
Trigger: GCCCACTGAGCTGGGACAGCGGGCTGGGGACATTTTAATCATCAATAAACGAAGCACTTTATTCTGTACAGGTGTGGGCAGGCCCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp TTTGAAAGCAGCAGCACTGAAGCAAAGGACAGGAGCGCAGAGGTGAGAGAAAACCATTCAACCCTTCCGTaGCCAGAAGACAGCCGACTC +
Preference number: 2 (lower is better)
Translates to: FESSSTEAKDRSAEVRENHSTLP*PEDSRL
Trigger: GAGTCGGCTGTCTTCTGGGCACGGAAGGGTTGAATG...GTTTTCTCTCACCTCTGCGCTCCTGTCCTTTGCTTCAGTGCTGCTGCTTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp CTTTCTGTGACAGACCAACAGACCCACATGGAGCATGGGGCCCGTATAATCCCATCCGTTCCCAGCCTCTaGCCTTCAGATTGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: LSVTDQQTHMEHGARIIPSVPSL*PSDCCL
Trigger: TAAACAGCAATCTGAAGGGCAGAGGCTGGGAACGGA...TGGGATTATACGGGCCCCATGCTCCATGTGGGTCTGTTGGTCTGTCACAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp GCATTGCTAGGCTACAGCCCATGTCTCATTCTCCTTGTATCCAGCAGGCCTCAGGGGGATTACCACTTCTaGAGGCTCCAGAATTTCAGG +
Preference number: 2 (lower is better)
Translates to: ALLGYSPCLILLVSSRPQGDYHF*RLQNFR
Trigger: CCTGAAATTCTGGAGCCTGCAGAAGTGGTAATCCCC...CTGAGGCCTGCTGGATACAAGGAGAATGAGACATGGGCTGTAGCCTAGCAATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp TTTGAAAGCAGCAGCACTGAAGCAAAGGACAGGAGCGCAGAGGTGAGAGAAAACAATGGCCAGGGTTTCTaGACCCAAGAAGTCCACAGG +
Preference number: 2 (lower is better)
Translates to: FESSSTEAKDRSAEVRENNGQGF*TQEVHR
Trigger: CCTGTGGACTTCTTGGGTCCAGAAACCCTGGCCATT...GTTTTCTCTCACCTCTGCGCTCCTGTCCTTTGCTTCAGTGCTGCTGCTTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR GCA 90 bp TTTGAAAGCAGCAGCACTGAAGCAAAGGACAGGAGCGCAGAGGTGAGAGAAAACCTCTGCCCTTCAGATTaGTGTTTACTGAGGAATGGC +
Preference number: 2 (lower is better)
Translates to: FESSSTEAKDRSAEVRENLCPSD*CLLRNG
Trigger: GCCATTCCTCAGTAAACAGCAATCTGAAGGGCAGAG...GTTTTCTCTCACCTCTGCGCTCCTGTCCTTTGCTTCAGTGCTGCTGCTTTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp TTCCAGGTCTTCTATGTCTTCATGAAGACTCCCCATCAACTGCTCCCAAGACCAGGGGCTTATTGCATTTaGCAGTTAGGGAGTGCAACC +
Preference number: 2 (lower is better)
Translates to: FQVFYVFMKTPHQLLPRPGAYCI*QLGSAT
Trigger: GGTTGCACTCCCTAACTGCCAAATGCAATAAGCCCC...TGGTCTTGGGAGCAGTTGATGGGGAGTCTTCATGAAGACATAGAAGACCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp GCATTGCTAGGCTACAGCCCATGTCTCATTCTCCTTGTATCCAGCAGGCCTCAGTTGAAGGAGAAAGACTaGTCCTATGGATACCCTAAA +
Preference number: 2 (lower is better)
Translates to: ALLGYSPCLILLVSSRPQLKEKD*SYGYPK
Trigger: TTTAGGGTATCCATAGGACCAGTCTTTCTCCTTCAA...CTGAGGCCTGCTGGATACAAGGAGAATGAGACATGGGCTGTAGCCTAGCAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 90 bp AAATTACCACCATGTTCCAGTTCCCTCATGCTAACATTCAGGGACTaGACCATCTCTTTAAAAATAAAGTATATAGCTGGGGAGATGAGA +
Preference number: 2 (lower is better)
Translates to: KLPPCSSSLMLTFRD*TISLKIKYIAGEMR
Trigger: TCTCATCTCCCCAGCTATATACTTTATTTTTAAAGAGATGGTCAAGTCCCTGAATGTTAGCATGAGGGAACTGGAACATGGTGGTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CCA 90 bp CAGTTCCCTCATGCTAACATTCAGGGACTTGACCATCTCTTTAAAAATAAAGTAAGAGACATTCTCTCCTaGATGTGGGGCTCTTTAAAA +
Preference number: 2 (lower is better)
Translates to: QFPHANIQGLDHLFKNKVRDILS*MWGSLK
Trigger: TTTTAAAGAGCCCCACATCCAGGAGAGAATGTCTCT...TACTTTATTTTTAAAGAGATGGTCAAGTCCCTGAATGTTAGCATGAGGGAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 72 bp GCCTGCAGCCCAGAGCTCCTCCTGCCCTGTATCGGCTaGCTCCAGCACCCCTCGCCTGGAGGGGTGCAGCCA +
Preference number: 3 (lower is better)
Translates to: ACSPELLLPCIG*LQHPSPGGVQP
Trigger: TGGCTGCACCCCTCCAGGCGAGGGGTGCTGGAGGCAGCCGATACAGGGCAGGAGGAGCTCTGGGCTGCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR TCA 72 bp ATGTCCCCAGCCCGCTGTCCCAGCTCAGTGGGCCTCTaGGGAGGTCAAGGGATTCGGCACCCTCTGCCAGCC +
Preference number: 3 (lower is better)
Translates to: MSPARCPSSVGL*GGQGIRHPLPA
Trigger: GGCTGGCAGAGGGTGCCGAATCCCTTGACCTCCTCAGAGGCCCACTGAGCTGGGACAGCGGGCTGGGGACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp AGAGAGGGAGGGTCCCACCTGTCTCCCCAGTGGACATaGGGCGGGGCTAAGGGCATGCTTGCAGCCTGCTCC +
Preference number: 3 (lower is better)
Translates to: REGGSHLSPQWT*GGAKGMLAACS
Trigger: GGAGCAGGCTGCAAGCATGCCCTTAGCCCCGCCCCATGTCCACTGGGGAGACAGGTGGGACCCTCCCTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp CCTGCCCTGTATCGGCTGCCTCCAGCACCCCTCGCCTaGAGGGGTGCAGCCAACCAGTCCCTCTCTGTTCTT +
Preference number: 3 (lower is better)
Translates to: PALYRLPPAPLA*RGAANQSLSVL
Trigger: AAGAACAGAGAGGGACTGGTTGGCTGCACCCCTCCAGGCGAGGGGTGCTGGAGGCAGCCGATACAGGGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp GGAGGTCAAGGGATTCGGCACCCTCTGCCAGCCCCTTaGGCACAGGCCTCTTCCAAGTGTGGCCATGCTGGG +
Preference number: 3 (lower is better)
Translates to: GGQGIRHPLPAP*AQASSKCGHAG
Trigger: CCCAGCATGGCCACACTTGGAAGAGGCCTGTGCCCAAGGGGCTGGCAGAGGGTGCCGAATCCCTTGACCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CAA 90 bp CTGCTCCCAAGACCAGAGCAGCCTGCACCAGTTGAGAGGCACAGGCCCAGGGCTCTCCCCTCTGGAGGCTaGGTCTCCAGCACCCAGAGA +
Preference number: 3 (lower is better)
Translates to: LLPRPEQPAPVERHRPRALPSGG*VSSTQR
Trigger: TCTCTGGGTGCTGGAGACCAAGCCTCCAGAGGGGAG...AGCCCTGGGCCTGTGCCTCTCAACTGGTGCAGGCTGCTCTGGTCTTGGGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 72 bp TGGGCCTCTGAGGAGGTCAAGGGATTCGGCACCCTCTaGCAGCCCCTTGGGCACAGGCCTCTTCCAAGTGTG +
Preference number: 3 (lower is better)
Translates to: WASEEVKGFGTL*QPLGHRPLPSV
Trigger: CACACTTGGAAGAGGCCTGTGCCCAAGGGGCTGGCAGAGGGTGCCGAATCCCTTGACCTCCTCAGAGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp CCTTCACACGCTGACACTCCCCTGCCCAGTCACACATaGTATCCTGCCATGCCTCCCCGGCCACAGGCCTCT +
Preference number: 3 (lower is better)
Translates to: PSHADTPLPSHT*YPAMPPRPQAS
Trigger: AGAGGCCTGTGGCCGGGGAGGCATGGCAGGATACCATGTGTGACTGGGCAGGGGAGTGTCAGCGTGTGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp TGGCCCCAAGAGGAGAGGAGGCCTCATGTGGGCTTCTaGGGGAGCAGACATAGATACGTGTCTCCTGGTGGG +
Preference number: 3 (lower is better)
Translates to: WPQEERRPHVGF*GSRHRYVSPGG
Trigger: CCCACCAGGAGACACGTATCTATGTCTGCTCCCCCAGAAGCCCACATGAGGCCTCCTCTCCTCTTGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp CCACTCATCTCGCTCAGATGCCTACTGTCCCCACCCTaGGACCATGGGCGTGTCACACACAGGCAGGCAGTA +
Preference number: 3 (lower is better)
Translates to: PLISLRCLLSPP*DHGRVTHRQAV
Trigger: TACTGCCTGCCTGTGTGTGACACGCCCATGGTCCCAGGGTGGGGACAGTAGGCATCTGAGCGAGATGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp AGCAGGCCTCAGAACCAGGCGTGCACAGATGAGGCGTaGCCTTCCCAACCAGGCCAGTCAGCAGAACCTAAG +
Preference number: 3 (lower is better)
Translates to: SRPQNQACTDEA*PSQPGQSAEPK
Trigger: CTTAGGTTCTGCTGACTGGCCTGGTTGGGAAGGCCACGCCTCATCTGTGCACGCCTGGTTCTGAGGCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 72 bp ATTCTCCTTGTATCCAGCAGGCCTCAGAACCAGGCGTaGACAGATGAGGCGTGGCCTTCCCAACCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: ILLVSSRPQNQA*TDEAWPSQPGQ
Trigger: CTGGCCTGGTTGGGAAGGCCACGCCTCATCTGTGCACGCCTGGTTCTGAGGCCTGCTGGATACAAGGAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp CCGTGCCCAGAAGACAGCCGACTCAGCCGAGCACCTTaGGCCTGCCCACACCTGTACAGAATAAAGTGCTTC +
Preference number: 3 (lower is better)
Translates to: PCPEDSRLSRAP*ACPHLYRIKCF
Trigger: GAAGCACTTTATTCTGTACAGGTGTGGGCAGGCCCAAGGTGCTCGGCTGAGTCGGCTGTCTTCTGGGCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp AGGCATACCCTCAGCCCAGTAGACTGCCTGGCAACCTaGCATCAGGAGACTCAGCACCAAGGTGCAGGAGAG +
Preference number: 3 (lower is better)
Translates to: RHTLSPVDCLAT*HQETQHQGAGE
Trigger: CTCTCCTGCACCTTGGTGCTGAGTCTCCTGATGCCAGGTTGCCAGGCAGTCTACTGGGCTGAGGGTATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 72 bp GGGGATGGGGGCTTATTGCATTTGGCAGTTAGGGAGTaGAACCTTTGTGGGCAGGGCAGGGAGTGTAGCACC +
Preference number: 3 (lower is better)
Translates to: GDGGLLHLAVRE*NLCGQGRECST
Trigger: GGTGCTACACTCCCTGCCCTGCCCACAAAGGTTGCACTCCCTAACTGCCAAATGCAATAAGCCCCCATCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CAA 90 bp GCTGGAGACCCAACTCCTGTGACAGGGTTCCGTTCCCAGCCTCTGCCCTTCAGAAGGATTGGCGACCCCTaGAGGTGGTCAACTCTTTTT +
Preference number: 3 (lower is better)
Translates to: AGDPTPVTGFRSQPLPFRRIGDP*RWSTLF
Trigger: AAAAAGAGTTGACCACCTCAAGGGGTCGCCAATCCT...TCTGAAGGGCAGAGGCTGGGAACGGAACCCTGTCACAGGAGTTGGGTCTCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 72 bp ACCTGGGATTTCAGGCATACCCTCAGCCCAGTAGACTaGCTGGCAACCTGGCATCAGGAGACTCAGCACCAA +
Preference number: 3 (lower is better)
Translates to: TWDFRHTLSPVD*LATWHQETQHQ
Trigger: TTGGTGCTGAGTCTCCTGATGCCAGGTTGCCAGGCAGTCTACTGGGCTGAGGGTATGCCTGAAATCCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp CTCCCACAGAGGCCTAAACACATCAGCTTCTCTCCCTaGCTGCACTGTGGCACCCCAGACTGTACAAGAGTG +
Preference number: 3 (lower is better)
Translates to: LPQRPKHISFSP*LHCGTPDCTRV
Trigger: CACTCTTGTACAGTCTGGGGTGCCACAGTGCAGCCAGGGAGAGAAGCTGATGTGTTTAGGCCTCTGTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp AGCCCAACCTCAGGCAGTGGGGCAGGAGTATGCAAATaGGTAACCTTCCTTTCTCAGAGAGGGAGGGTCCCA +
Preference number: 3 (lower is better)
Translates to: SPTSGSGAGVCK*VTFLSQRGRVP
Trigger: TGGGACCCTCCCTCTCTGAGAAAGGAAGGTTACCCATTTGCATACTCCTGCCCCACTGCCTGAGGTTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp TGTCACACACAGGCAGGCAGTAAGGCTTCACACACCTaGGCCTGGTCTTCCTGTTATCACCCAGACCCCAGT +
Preference number: 3 (lower is better)
Translates to: CHTQAGSKASHT*AWSSCYHPDPS
Trigger: ACTGGGGTCTGGGTGATAACAGGAAGACCAGGCCCAGGTGTGTGAAGCCTTACTGCCTGCCTGTGTGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CAA 90 bp CTGTCATTCTGGGCCACCAAAGCCTCTCCCACAGACCTCACAGGGTCACAGGTGCATGTCTCATTCTCCTaGTATCCAGCAGGCCTCAGA +
Preference number: 3 (lower is better)
Translates to: LSFWATKASPTDLTGSQVHVSFS*YPAGLR
Trigger: TCTGAGGCCTGCTGGATACAAGGAGAATGAGACATG...CACCTGTGACCCTGTGAGGTCTGTGGGAGAGGCTTTGGTGGCCCAGAATGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR TCA 72 bp TGGGAGATCAAACCCGGGGAAACAGAGGACATGAAATaGCAACAGAGAGGGGTGGCCTATGACTGCCTGCCC +
Preference number: 3 (lower is better)
Translates to: WEIKPGETEDMK*QQRGVAYDCLP
Trigger: GGGCAGGCAGTCATAGGCCACCCCTCTCTGTTGTCATTTCATGTCCTCTGTTTCCCCGGGTTTGATCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR TCA 72 bp GCAGGGAGCGGCGGGAGGGGTGTAAGGTGCAGAGTGTaGCAAAGAAGCTTATCAACAGTGGGAGATCAAACC +
Preference number: 3 (lower is better)
Translates to: AGSGGRGVRCRV*QRSLSTVGDQT
Trigger: GGTTTGATCTCCCACTGTTGATAAGCTTCTTTGTCACACTCTGCACCTTACACCCCTCCCGCCGCTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR TCA 72 bp CCGTTCCCAGCCTCTGCCCTTCAGATTGCTGTTTACTaGGGAATGGCCAGGGTTTCTGGACCCAAGAAGTCC +
Preference number: 3 (lower is better)
Translates to: PFPASALQIAVY*GMARVSGPKKS
Trigger: GGACTTCTTGGGTCCAGAAACCCTGGCCATTCCTCAGTAAACAGCAATCTGAAGGGCAGAGGCTGGGAACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR TCA 72 bp CCACTTCTGCAGGCTCCAGAATTTCAGGTCTTTCTGTaGCAGACCAACAGACCCACATGGAGCATGGGGCCC +
Preference number: 3 (lower is better)
Translates to: PLLQAPEFQVFL*QTNRPTWSMGP
Trigger: GGGCCCCATGCTCCATGTGGGTCTGTTGGTCTGTCACAGAAAGACCTGAAATTCTGGAGCCTGCAGAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 72 bp TACTCCCAAGCACAAGGAGTAAAATCTCCAAGAAGCTaGACCAGGACCCAGGGCCACGGGTATCCAGCTGCA +
Preference number: 3 (lower is better)
Translates to: YSQAQGVKSPRS*TRTQGHGYPAA
Trigger: TGCAGCTGGATACCCGTGGCCCTGGGTCCTGGTGCAGCTTCTTGGAGATTTTACTCCTTGTGCTTGGGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 72 bp CACAGAGGCCTAAACACATCAGCTTCTCTCCCTGGCTaGACTGTGGCACCCCAGACTGTACAAGAGTGCAAG +
Preference number: 3 (lower is better)
Translates to: HRGLNTSASLPG*TVAPQTVQECK
Trigger: CTTGCACTCTTGTACAGTCTGGGGTGCCACAGTGCAGCCAGGGAGAGAAGCTGATGTGTTTAGGCCTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 72 bp GCATGCTTGCAGCCTGCTCCTCAGGCTAGGAAAGGGTaGCTATACAGGGACAACAGCTCATTCAACCCTTCC +
Preference number: 3 (lower is better)
Translates to: ACLQPAPQARKG*LYRDNSSFNPS
Trigger: GGAAGGGTTGAATGAGCTGTTGTCCCTGTATAGGCACCCTTTCCTAGCCTGAGGAGCAGGCTGCAAGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp TGGTCTCCAGCACCCAGAGACATTCTCTCCTGGATGTaGGGCTCTTTAAAAGTCCCAGTGCAGGGTGGGGAT +
Preference number: 3 (lower is better)
Translates to: WSPAPRDILSWM*GSLKVPVQGGD
Trigger: ATCCCCACCCTGCACTGGGACTTTTAAAGAGCCCCACATCCAGGAGAGAATGTCTCTGGGTGCTGGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp GAGGCTTGGTCTCCAGCACCCAGAGACATTCTCTCCTaGATGTGGGGCTCTTTAAAAGTCCCAGTGCAGGGT +
Preference number: 3 (lower is better)
Translates to: EAWSPAPRDILS*MWGSLKVPVQG
Trigger: ACCCTGCACTGGGACTTTTAAAGAGCCCCACATCCAGGAGAGAATGTCTCTGGGTGCTGGAGACCAAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp CAGCCTCTGCCCTTCAGATTGCTGTTTACTGAGGAATaGCCAGGGTTTCTGGACCCAAGAAGTCCACAGGGC +
Preference number: 3 (lower is better)
Translates to: QPLPFRLLFTEE*PGFLDPRSPQG
Trigger: GCCCTGTGGACTTCTTGGGTCCAGAAACCCTGGCCATTCCTCAGTAAACAGCAATCTGAAGGGCAGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp TGTTATCACCCAGACCCCAGTGAGGGGATGTGGGACTaGGCATCCCTGGGTTCCAGGTCTTCTATGTCTTCA +
Preference number: 3 (lower is better)
Translates to: CYHPDPSEGMWD*ASLGSRSSMSS
Trigger: TGAAGACATAGAAGACCTGGAACCCAGGGATGCCCAGTCCCACATCCCCTCACTGGGGTCTGGGTGATAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp ACCCTAAATACTCTTGGGACTTGTGCACTGGGATGCTaGGACACCTGCCACCCTTCCTCAGGACAGCAACAC +
Preference number: 3 (lower is better)
Translates to: TLNTLGTCALGC*DTCHPSSGQQH
Trigger: GTGTTGCTGTCCTGAGGAAGGGTGGCAGGTGTCCCAGCATCCCAGTGCACAAGTCCCAAGAGTATTTAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR TCA 72 bp GAAAGGTGTATAAAGGTGCTGGAGACCCAACTCCTGTaGCAGGGTTCCGTTCCCAGCCTCTGCCCTTCAGAT +
Preference number: 3 (lower is better)
Translates to: ERCIKVLETQLL*QGSVPSLCPSD
Trigger: ATCTGAAGGGCAGAGGCTGGGAACGGAACCCTGTCACAGGAGTTGGGTCTCCAGCACCTTTATACACCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR TCA 72 bp ATGTCCCCAGGGCCCAGAATGCCACCAAACAGAACATaGGCAGCAGGAAGTACCTATGAGAACCCTAGGTGC +
Preference number: 3 (lower is better)
Translates to: MSPGPRMPPNRT*AAGSTYENPRC
Trigger: GCACCTAGGGTTCTCATAGGTACTTCCTGCTGCTCATGTTCTGTTTGGTGGCATTCTGGGCCCTGGGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 72 bp CCAGAAGACAGCCGACTCAGCCGAGCACCTTGGGCCTaGCCACACCTGTACAGAATAAAGTGCTTCGTTTAT +
Preference number: 3 (lower is better)
Translates to: PEDSRLSRAPWA*PHLYRIKCFVY
Trigger: ATAAACGAAGCACTTTATTCTGTACAGGTGTGGGCAGGCCCAAGGTGCTCGGCTGAGTCGGCTGTCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 72 bp TGGTCCTATGGATACCCTAAATACTCTTGGGACTTGTaGACTGGGATGCTGGGACACCTGCCACCCTTCCTC +
Preference number: 3 (lower is better)
Translates to: WSYGYPKYSWDL*TGMLGHLPPFL
Trigger: GAGGAAGGGTGGCAGGTGTCCCAGCATCCCAGTGCACAAGTCCCAAGAGTATTTAGGGTATCCATAGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 72 bp AGGGGCTGGAAATGTTCTAGATGCCTGATTTCTCTCTaGCGCCCACAGCCTATTTATTACCCGGGGCCCTGT +
Preference number: 3 (lower is better)
Translates to: RGWKCSRCLISL*RPQPIYYPGPC
Trigger: ACAGGGCCCCGGGTAATAAATAGGCTGTGGGCGGCAGAGAGAAATCAGGCATCTAGAACATTTCCAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp CTGGATGTGGGGCTCTTTAAAAGTCCCAGTGCAGGGTaGGGATTCCTGTACCTGCCTGGTAGGGATGTAAGA +
Preference number: 3 (lower is better)
Translates to: LDVGLFKSPSAG*GFLYLPGRDVR
Trigger: TCTTACATCCCTACCAGGCAGGTACAGGAATCCCCACCCTGCACTGGGACTTTTAAAGAGCCCCACATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp CTTCCCAACCAGGCCAGTCAGCAGAACCTAAGGGGCTaGAAATGTTCTAGATGCCTGATTTCTCTCTGCCGC +
Preference number: 3 (lower is better)
Translates to: LPNQASQQNLRG*KCSRCLISLCR
Trigger: GCGGCAGAGAGAAATCAGGCATCTAGAACATTTCCAGCCCCTTAGGTTCTGCTGACTGGCCTGGTTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR TCA 72 bp AACAGTGGGAGATCAAACCCGGGGAAACAGAGGACATaGAATGACAACAGAGAGGGGTGGCCTATGACTGCC +
Preference number: 3 (lower is better)
Translates to: NSGRSNPGKQRT*NDNREGWPMTA
Trigger: GGCAGTCATAGGCCACCCCTCTCTGTTGTCATTTCATGTCCTCTGTTTCCCCGGGTTTGATCTCCCACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp CAATTCCACATCATGGGGATGGGGGCTTATTGCATTTaGCAGTTAGGGAGTGCAACCTTTGTGGGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: QFHIMGMGAYCI*QLGSATFVGRA
Trigger: TGCCCTGCCCACAAAGGTTGCACTCCCTAACTGCCAAATGCAATAAGCCCCCATCCCCATGATGTGGAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR TCA 72 bp AGGATCCTCCCAAGAAGTCCTTTCCTTAGGCCTTTGTaGGACTGGGTGTCAATTCCAAATGGCAGGCTGTCC +
Preference number: 3 (lower is better)
Translates to: RILPRSPFLRPL*DWVSIPNGRLS
Trigger: GGACAGCCTGCCATTTGGAATTGACACCCAGTCTCACAAAGGCCTAAGGAAAGGACTTCTTGGGAGGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp GGGGCCCGTATAATCCCAGCCTTGAAGGAGAAAGACTaGTCCTATGGATACCCTAAATACTCTTGGGACTTG +
Preference number: 3 (lower is better)
Translates to: GARIIPALKEKD*SYGYPKYSWDL
Trigger: CAAGTCCCAAGAGTATTTAGGGTATCCATAGGACCAGTCTTTCTCCTTCAAGGCTGGGATTATACGGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR-3UTR CAA 90 bp TTCCAGGTCTTCTATGTCTTCATGAAGACTCCCCATCAACTGCTCCCAAGACCACCTCTGCCCTTCAGATaGCTGTTTACTGAGGAATGG +
Preference number: 3 (lower is better)
Translates to: FQVFYVFMKTPHQLLPRPPLPFR*LFTEEW
Trigger: CCATTCCTCAGTAAACAGCAATCTGAAGGGCAGAGG...TGGTCTTGGGAGCAGTTGATGGGGAGTCTTCATGAAGACATAGAAGACCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR GCA 72 bp AGTCAGCAGAACCTAAGGGGCTGGAAATGTTCTAGATaGCTGATTTCTCTCTGCCGCCCACAGCCTATTTAT +
Preference number: 3 (lower is better)
Translates to: SQQNLRGWKCSR*LISLCRPQPIY
Trigger: ATAAATAGGCTGTGGGCGGCAGAGAGAAATCAGGCATCTAGAACATTTCCAGCCCCTTAGGTTCTGCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp AAATGGCAGGCTGTCCTGGAACTATGTGGCAATGGGTaGCTTTTAACTCCTAATCCTCTTGCCTCCCAAATG +
Preference number: 3 (lower is better)
Translates to: KWQAVLELCGNG*LLTPNPLASQM
Trigger: CATTTGGGAGGCAAGAGGATTAGGAGTTAAAAGCCACCCATTGCCACATAGTTCCAGGACAGCCTGCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CCA 72 bp GTAGGGCTTGGCCATGGTACTAATGGACTAATGGCGTaGAAACATGTCACTTTTGAATGGTGGTATGCAGTT +
Preference number: 3 (lower is better)
Translates to: VGLGHGTNGLMA*KHVTFEWWYAV
Trigger: AACTGCATACCACCATTCAAAAGTGACATGTTTCCACGCCATTAGTCCATTAGTACCATGGCCAAGCCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR TCA 72 bp CTGGTGTTACAGGTATGTTCTATCCCATCTTGTTTTTaGGGGTGTGAATACAACGAGTCTTCTGAAACAGGA +
Preference number: 3 (lower is better)
Translates to: LVLQVCSIPSCF*GCEYNESSETG
Trigger: TCCTGTTTCAGAAGACTCGTTGTATTCACACCCTCAAAAACAAGATGGGATAGAACATACCTGTAACACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp CTGCTCCCAAGACCAGAGCAGCCTGCACCAGTTGAGAGGCACAGGCCCAGGGCTGCTGGTGGCAGGCTGTaGCAGGGCCACAGGGCCCGA +
Preference number: 4 (lower is better)
Translates to: LLPRPEQPAPVERHRPRAAGGRL*QGHRAR
Trigger: TCGGGCCCTGTGGCCCTGGCACAGCCTGCCACCAGC...AGCCCTGGGCCTGTGCCTCTCAACTGGTGCAGGCTGCTCTGGTCTTGGGAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp CCAGCCCCTTGGGCACAGGCCTCTTCCAAGTGTGGCCATGCTGGGAGCGGCTGGCCTCCAGCTTCACCTTaGCCCCCAGCCCGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PAPWAQASSKCGHAGSGWPPASP*PPARQL
Trigger: CAGCTGACGGGCTGGGGGCCAAGGTGAAGCTGGAGG...CCAGCCGCTCCCAGCATGGCCACACTTGGAAGAGGCCTGTGCCCAAGGGGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp CCAGCCCCTTGGGCACAGGCCTCTTCCAAGTGTGGCCATGCTGGGAGCGGCTGGATTGGCACCAGAGCCTaGCTTGCCCTCGGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: PAPWAQASSKCGHAGSGWIGTRA*LALGSG
Trigger: ACCGGACCCGAGGGCAAGCCAGGCTCTGGTGCCAAT...CCAGCCGCTCCCAGCATGGCCACACTTGGAAGAGGCCTGTGCCCAAGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp TCAGATGCCTACTGTCCCCACCCTGGGACCATGGGCGTGTCACACACAGGCAGGCCTCTGGCTCAGGGGTaGCCCGGCGCCGGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: SDAYCPHPGTMGVSHTGRPLAQG*PGAGCS
Trigger: AGAACACCCGGCGCCGGGCCACCCCTGAGCCAGAGG...CCTGCCTGTGTGTGACACGCCCATGGTCCCAGGGTGGGGACAGTAGGCATCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp CCAGCCCCTTGGGCACAGGCCTCTTCCAAGTGTGGCCATGCTGGGAGCGGCTGGGGGCAACCATGTGCTTaGGCACGTGCGCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: PAPWAQASSKCGHAGSGWGQPCA*ARAPWC
Trigger: ACACCATGGCGCACGTGCGCAAGCACATGGTTGCCC...CCAGCCGCTCCCAGCATGGCCACACTTGGAAGAGGCCTGTGCCCAAGGGGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp TCAACCCTTCCGTGCCCAGAAGACAGCCGACTCAGCCGAGCACCTTGGGCCTGCGCGTCCAGCAGCTCCTaGCAGGAGGCCGCGATGTCA +
Preference number: 4 (lower is better)
Translates to: STLPCPEDSRLSRAPWACASSSS*QEAAMS
Trigger: TGACATCGCGGCCTCCTGCCAGGAGCTGCTGGACGC...GCAGGCCCAAGGTGCTCGGCTGAGTCGGCTGTCTTCTGGGCACGGAAGGGTTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp GGGCTGAGCTGGCGGATGAAAGGGGAGGGGCCTACTGTCTGGGCTCCTGTGACTGGCTGGAAGAGGCGCTaGTCATTGAGGCGGCCCATC +
Preference number: 4 (lower is better)
Translates to: GLSWRMKGEGPTVWAPVTGWKRR*SLRRPI
Trigger: GATGGGCCGCCTCAATGAGCAGCGCCTCTTCCAGCC...AGTCACAGGAGCCCAGACAGTAGGCCCCTCCCCTTTCATCCGCCAGCTCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp TGCCTCCAGCACCCCTCGCCTGGAGGGGTGCAGCCAACCAGTCCCTCTCTGTTCCACTGGCCACAGATCTaGATCCGGCTGTGGGTCACG +
Preference number: 4 (lower is better)
Translates to: CLQHPSPGGVQPTSPSLFHWPQI*IRLWVT
Trigger: CGTGACCCACAGCCGGATGCAGATCTGTGGCCAGTG...GAACAGAGAGGGACTGGTTGGCTGCACCCCTCCAGGCGAGGGGTGCTGGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp GCTGGAGACCCAACTCCTGTGACAGGGTTCCGTTCCCAGCCTCTGCCCTTCAGATCTGCTGCAGGCCGCTaGGCGCGAGTGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: AGDPTPVTGFRSQPLPFRSAAGR*ARVPPE
Trigger: CTCTGGAGGCACTCGCGCCCAGCGGCCTGCAGCAGA...TCTGAAGGGCAGAGGCTGGGAACGGAACCCTGTCACAGGAGTTGGGTCTCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 72 bp AGGAGGTCAAGGGATTCGGCACCCTCTGCCAGCCCCTaGGGCACAGGCCTCTTCCAAGTGTGGCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: RRSRDSAPSASP*GTGLFQVWPCW
Trigger: CCAGCATGGCCACACTTGGAAGAGGCCTGTGCCCAAGGGGCTGGCAGAGGGTGCCGAATCCCTTGACCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp TCAACCCTTCCGTGCCCAGAAGACAGCCGACTCAGCCGAGCACCTTGGGCCTGCATGAAGTTGAGGATCTaGTGCAGGCCGCTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: STLPCPEDSRLSRAPWACMKLRI*CRPLGA
Trigger: CGCGCCCAGCGGCCTGCAGCAGATCCTCAACTTCAT...GCAGGCCCAAGGTGCTCGGCTGAGTCGGCTGTCTTCTGGGCACGGAAGGGTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp GCTGGAGACCCAACTCCTGTGACAGGGTTCCGTTCCCAGCCTCTGCCCTTCAGAGCGATGTCAGCCATCTaGAGCAGCGAGGCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: AGDPTPVTGFRSQPLPFRAMSAI*SSEAAL
Trigger: CAGCGCGGCCTCGCTGCTGCAGATGGCTGACATCGC...TCTGAAGGGCAGAGGCTGGGAACGGAACCCTGTCACAGGAGTTGGGTCTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp CTGCTCCCAAGACCAGAGCAGCCTGCACCAGTTGAGAGGCACAGGCCCAGGGCTCACATCGCACAGGTCTaGCTGGAAGAGGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LLPRPEQPAPVERHRPRAHIAQV*LEEALL
Trigger: GAGCAGCGCCTCTTCCAGCCAGACCTGTGCGATGTG...AGCCCTGGGCCTGTGCCTCTCAACTGGTGCAGGCTGCTCTGGTCTTGGGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp GGGCTGAGCTGGCGGATGAAAGGGGAGGGGCCTACTGTCTGGGCTCCTGTGACTGAGGCCTGGGGCATCTaGCTCCTGCTTGATGTCACA +
Preference number: 4 (lower is better)
Translates to: GLSWRMKGEGPTVWAPVTEAWGI*LLLDVT
Trigger: TGTGACATCAAGCAGGAGGCAGATGCCCCAGGCCTC...AGTCACAGGAGCCCAGACAGTAGGCCCCTCCCCTTTCATCCGCCAGCTCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp GGGCTGAGCTGGCGGATGAAAGGGGAGGGGCCTACTGTCTGGGCTCCTGTGACTCTCCTCAGAACTCTCTaGATCCTGCTCACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GLSWRMKGEGPTVWAPVTLLRTL*ILLTGP
Trigger: GGGCCCAGTGAGCAGGATGCAGAGAGTTCTGAGGAG...AGTCACAGGAGCCCAGACAGTAGGCCCCTCCCCTTTCATCCGCCAGCTCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp CCAGCCCCTTGGGCACAGGCCTCTTCCAAGTGTGGCCATGCTGGGAGCGGCTGGCACTTCTGGCACGGATaGTGCTGTTTTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PAPWAQASSKCGHAGSGWHFWHG*CCFSSS
Trigger: GCTGGAGGAAAAACAGCAGCATCCGTGCCAGAAGTG...CCAGCCGCTCCCAGCATGGCCACACTTGGAAGAGGCCTGTGCCCAAGGGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp CGACTCAGCCGAGCACCTTGGGCCTGCCCACACCTGTACAGAATAAAGTGCTTCGCACCGGAGCACAGCTaGTGGCAGGCTGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RLSRAPWACPHLYRIKCFAPEHS*WQAVPG
Trigger: CCCTGGCACAGCCTGCCACCAGCTGTGCTCCGGTGC...GAAGCACTTTATTCTGTACAGGTGTGGGCAGGCCCAAGGTGCTCGGCTGAGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp TGCCTCCAGCACCCCTCGCCTGGAGGGGTGCAGCCAACCAGTCCCTCTCTGTTCGAGTGCTGCAGCGAGTaGACCTTCAGCGACATACTG +
Preference number: 4 (lower is better)
Translates to: CLQHPSPGGVQPTSPSLFECCSE*TFSDIL
Trigger: CAGTATGTCGCTGAAGGTCCACTCGCTGCAGCACTC...GAACAGAGAGGGACTGGTTGGCTGCACCCCTCCAGGCGAGGGGTGCTGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp CTGTCATTCTGGGCCACCAAAGCCTCTCCCACAGACCTCACAGGGTCACAGGTGGCCTGGGAGGTGCTGTaGGGAAGAGCGGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LSFWATKASPTDLTGSQVAWEVL*GRAELW
Trigger: CCACAGCTCCGCTCTTCCCCACAGCACCTCCCAGGC...CACCTGTGACCCTGTGAGGTCTGTGGGAGAGGCTTTGGTGGCCCAGAATGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR TCA 90 bp TCAGATGCCTACTGTCCCCACCCTGGGACCATGGGCGTGTCACACACAGGCAGGGGTACCAGCGGTTGTTaGAGACCCGAGGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: SDAYCPHPGTMGVSHTGRGTSGC*RPEGTS
Trigger: AGAAGTGCCCTCGGGTCTTCAACAACCGCTGGTACC...CCTGCCTGTGTGTGACACGCCCATGGTCCCAGGGTGGGGACAGTAGGCATCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR TCA 90 bp CAGGCACACAGGGGCCTCAGAGAGAGGGCTGTGCCCCCATCCCAGACAGAGCCCCACACCACTGACACATaGACTGCTTGTGGCCAATGT +
Preference number: 4 (lower is better)
Translates to: QAHRGLRERAVPPSQTEPHTTDT*TACGQC
Trigger: ACATTGGCCACAAGCAGTTCATGTGTCAGTGGTGTG...GGGCTCTGTCTGGGATGGGGGCACAGCCCTCTCTCTGAGGCCCCTGTGTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp TCAACCCTTCCGTGCCCAGAAGACAGCCGACTCAGCCGAGCACCTTGGGCCTGCCTTGAAGAGTGTCTGTaGTGGCCCAGCAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: STLPCPEDSRLSRAPWACLEECL*WPSSGR
Trigger: TCTGCCACTGCTGGGCCAGCACAGACACTCTTCAAG...GCAGGCCCAAGGTGCTCGGCTGAGTCGGCTGTCTTCTGGGCACGGAAGGGTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp TCCTCCTGTCTCAGTTCTCATCTACCTGGGATTTCAGGCATACCCTCAGCCCAGGGACCTGCGGGGTCCTaGCTGCCCTCAGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SSCLSSHLPGISGIPSAQGPAGS*LPSASL
Trigger: GAGGGAGGCTGAGGGCAGGCAGGACCCCGCAGGTCC...CTGGGCTGAGGGTATGCCTGAAATCCCAGGTAGATGAGAACTGAGACAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp GGTGGCGATCACGTCCGAATCTCCACAGGCAGCCACCTCACCCACAACATCCCGTCGCACAGGTCTGGCTaGAAGAGGCGCTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: GGDHVRISTGSHLTHNIPSHRSG*KRRCSL
Trigger: CAATGAGCAGCGCCTCTTCCAGCCAGACCTGTGCGA...CGGGATGTTGTGGGTGAGGTGGCTGCCTGTGGAGATTCGGACGTGATCGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp TCAGATGCCTACTGTCCCCACCCTGGGACCATGGGCGTGTCACACACAGGCAGGCCTCTCGATGATCGCTaGGCCCTTCCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SDAYCPHPGTMGVSHTGRPLDDR*ALPPLP
Trigger: AGGAAGAGGAGGAAGGGCCCAGCGATCATCGAGAGG...CCTGCCTGTGTGTGACACGCCCATGGTCCCAGGGTGGGGACAGTAGGCATCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp TCAGATGCCTACTGTCCCCACCCTGGGACCATGGGCGTGTCACACACAGGCAGGGATAGCTCGACCCGCTaGAGCTGCTTGTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SDAYCPHPGTMGVSHTGRDSSTR*SCLFCV
Trigger: CACACAGAACAAGCAGCTGCAGCGGGTCGAGCTATC...CCTGCCTGTGTGTGACACGCCCATGGTCCCAGGGTGGGGACAGTAGGCATCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp TGGGGATTCCTGTACCTGCCTGGTAGGGATGTAAGAAAGGAAACCCATGGGGGCGCGCTGAGCACCTCGTaGACGTTGGCCGCGTTCACG +
Preference number: 4 (lower is better)
Translates to: WGFLYLPGRDVRKETHGGALSTS*TLAAFT
Trigger: CGTGAACGCGGCCAACGTGCACGAGGTGCTCAGCGC...GCCCCCATGGGTTTCCTTTCTTACATCCCTACCAGGCAGGTACAGGAATCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp TGCCTCCAGCACCCCTCGCCTGGAGGGGTGCAGCCAACCAGTCCCTCTCTGTTCTCTCTCCTGTGTGTGTaGGTCGATGCCGCTTCATAT +
Preference number: 4 (lower is better)
Translates to: CLQHPSPGGVQPTSPSLFSLLCV*VDAASY
Trigger: ATATGAAGCGGCATCGACGCACACACACAGGAGAGA...GAACAGAGAGGGACTGGTTGGCTGCACCCCTCCAGGCGAGGGGTGCTGGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp CTGTCATTCTGGGCCACCAAAGCCTCTCCCACAGACCTCACAGGGTCACAGGTGCGAGGCATCCAGTTCTaGCTCCAGCCCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LSFWATKASPTDLTGSQVRGIQF*LQPLST
Trigger: AGTGGAGAGGGGCTGGAGCCAGAACTGGATGCCTCG...CACCTGTGACCCTGTGAGGTCTGTGGGAGAGGCTTTGGTGGCCCAGAATGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp GGGCTGAGCTGGCGGATGAAAGGGGAGGGGCCTACTGTCTGGGCTCCTGTGACTCTGCATCCTGCTCACTaGGCCCATCTTCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: GLSWRMKGEGPTVWAPVTLHPAH*AHLLHP
Trigger: AGGATGAAGAAGATGGGCCCAGTGAGCAGGATGCAG...AGTCACAGGAGCCCAGACAGTAGGCCCCTCCCCTTTCATCCGCCAGCTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR TCA 90 bp GGTGGCGATCACGTCCGAATCTCCACAGGCAGCCACCTCACCCACAACATCCCGCATCTGCCTCCTGCTTaGTGTCACAGTAGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: GGDHVRISTGSHLTHNIPHLPPA*CHSSRV
Trigger: CACCCTACTACTGTGACATCAAGCAGGAGGCAGATG...CGGGATGTTGTGGGTGAGGTGGCTGCCTGTGGAGATTCGGACGTGATCGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp TGGGGATTCCTGTACCTGCCTGGTAGGGATGTAAGAAAGGAAACCCATGGGGGCCACCAGCGAGAACTCTaGCGCCGGGGAGTCTGTCGT +
Preference number: 4 (lower is better)
Translates to: WGFLYLPGRDVRKETHGGHQREL*RRGVCR
Trigger: ACGACAGACTCCCCGGCGGCAGAGTTCTCGCTGGTG...GCCCCCATGGGTTTCCTTTCTTACATCCCTACCAGGCAGGTACAGGAATCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp CGACTCAGCCGAGCACCTTGGGCCTGCCCACACCTGTACAGAATAAAGTGCTTCCCGGGCATAGATCTTTaGGAGGCCTGGGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: RLSRAPWACPHLYRIKCFPGIDL*EAWGIC
Trigger: GCAGATGCCCCAGGCCTCCCAAAGATCTATGCCCGG...GAAGCACTTTATTCTGTACAGGTGTGGGCAGGCCCAAGGTGCTCGGCTGAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp TGGGGATTCCTGTACCTGCCTGGTAGGGATGTAAGAAAGGAAACCCATGGGGGCGGCCGAGCACCACAGTaGCTGGATTGGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: WGFLYLPGRDVRKETHGGGRAPQ*LDWHQS
Trigger: GCTCTGGTGCCAATCCAGCCACTGTGGTGCTCGGCC...GCCCCCATGGGTTTCCTTTCTTACATCCCTACCAGGCAGGTACAGGAATCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp CTGTCATTCTGGGCCACCAAAGCCTCTCCCACAGACCTCACAGGGTCACAGGTGAAGCGCTTCCCACACTaGCCACAGATCTGCATCCGG +
Preference number: 4 (lower is better)
Translates to: LSFWATKASPTDLTGSQVKRFPH*PQICIR
Trigger: CCGGATGCAGATCTGTGGCCAGTGTGGGAAGCGCTT...CACCTGTGACCCTGTGAGGTCTGTGGGAGAGGCTTTGGTGGCCCAGAATGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp CTGTCATTCTGGGCCACCAAAGCCTCTCCCACAGACCTCACAGGGTCACAGGTGGGCATGTCCTTGGTGTaGGCAACCATGTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: LSFWATKASPTDLTGSQVGMSLV*ATMCLR
Trigger: GCGCAAGCACATGGTTGCCCACACCAAGGACATGCC...CACCTGTGACCCTGTGAGGTCTGTGGGAGAGGCTTTGGTGGCCCAGAATGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR TCA 90 bp TCCTCCTGTCTCAGTTCTCATCTACCTGGGATTTCAGGCATACCCTCAGCCCAGAGAGGCGCTGCTCATTaGGGCGGCCCATCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSCLSSHLPGISGIPSAQRGAAH*GGPSSR
Trigger: CCTGCTTGATGGGCCGCCTCAATGAGCAGCGCCTCT...CTGGGCTGAGGGTATGCCTGAAATCCCAGGTAGATGAGAACTGAGACAGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR TCA 90 bp CTGTCATTCTGGGCCACCAAAGCCTCTCCCACAGACCTCACAGGGTCACAGGTGCACAGGTCTCACAGGTaGAGGGCATGTCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LSFWATKASPTDLTGSQVHRSHR*RACPWC
Trigger: ACACCAAGGACATGCCCTTCACCTGTGAGACCTGTG...CACCTGTGACCCTGTGAGGTCTGTGGGAGAGGCTTTGGTGGCCCAGAATGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp AGTCCCAGTGCAGGGTGGGGATTCCTGTACCTGCCTGGTAGGGATGTAAGAAAGCATTCGGCTATGTGGTaGAGGGTCCACCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SPSAGWGFLYLPGRDVRKHSAMW*RVHLAA
Trigger: GGCAGCCAGGTGGACCCTCCACCACATAGCCGAATG...CTTTCTTACATCCCTACCAGGCAGGTACAGGAATCCCCACCCTGCACTGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp TTCCAGGTCTTCTATGTCTTCATGAAGACTCCCCATCAACTGCTCCCAAGACCAACGTCCAGCCTCCTCTaGCTCAGGGGTGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: FQVFYVFMKTPHQLLPRPTSSLL*LRGGPA
Trigger: CGCCGGGCCACCCCTGAGCCAGAGGAGGCTGGACGT...TGGTCTTGGGAGCAGTTGATGGGGAGTCTTCATGAAGACATAGAAGACCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 72 bp TCCGTGCCCAGAAGACAGCCGACTCAGCCGAGCACCTaGGGCCTGCCCACACCTGTACAGAATAAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: SVPRRQPTQPST*GLPTPVQNKVL
Trigger: AAGCACTTTATTCTGTACAGGTGTGGGCAGGCCCAAGGTGCTCGGCTGAGTCGGCTGTCTTCTGGGCACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp CTGTCATTCTGGGCCACCAAAGCCTCTCCCACAGACCTCACAGGGTCACAGGTGGAACTCTCTGCATCCTaGTCACTGGGCCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LSFWATKASPTDLTGSQVELSAS*SLGPSS
Trigger: AGAAGATGGGCCCAGTGAGCAGGATGCAGAGAGTTC...CACCTGTGACCCTGTGAGGTCTGTGGGAGAGGCTTTGGTGGCCCAGAATGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp TTCCAGGTCTTCTATGTCTTCATGAAGACTCCCCATCAACTGCTCCCAAGACCAGAGGGTCCACCTGGCTaGCCTGACACCCAGCGGGAC +
Preference number: 4 (lower is better)
Translates to: FQVFYVFMKTPHQLLPRPEGPPG*PDTQRD
Trigger: GTCCCGCTGGGTGTCAGGGCAGCCAGGTGGACCCTC...TGGTCTTGGGAGCAGTTGATGGGGAGTCTTCATGAAGACATAGAAGACCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 72 bp GGGCCGGTGAATCAGGTTTTTCTCCCCTCTGGAGGCTaGGTCTCCAGCACCCAGAGACATTCTCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: GPVNQVFLPSGG*VSSTQRHSLLD
Trigger: ATCCAGGAGAGAATGTCTCTGGGTGCTGGAGACCAAGCCTCCAGAGGGGAGAAAAACCTGATTCACCGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 72 bp TGCCGCCCACAGCCTATTTATTACCCGGGGCCCTGTTaGAAAGCAGCAGCACTGAAGCAAAGGACAGGAGCG +
Preference number: 4 (lower is better)
Translates to: CRPQPIYYPGPC*KAAALKQRTGA
Trigger: CGCTCCTGTCCTTTGCTTCAGTGCTGCTGCTTTCAAACAGGGCCCCGGGTAATAAATAGGCTGTGGGCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR TCA 90 bp CTGTCATTCTGGGCCACCAAAGCCTCTCCCACAGACCTCACAGGGTCACAGGTGGCTGCTTGTTCTGTGTaGAGAGCGAGTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: LSFWATKASPTDLTGSQVAACSV*RASGRT
Trigger: AGTTCTTCCACTCGCTCTTCACACAGAACAAGCAGC...CACCTGTGACCCTGTGAGGTCTGTGGGAGAGGCTTTGGTGGCCCAGAATGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp TTTGAAAGCAGCAGCACTGAAGCAAAGGACAGGAGCGCAGAGGTGAGAGAAAACCCGAGTGTCCCTGCATaGCATCCTCCTGGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: FESSSTEAKDRSAEVRENPSVPA*HPPGRA
Trigger: TGCTCGGCCAGGAGGATGGCATGCAGGGACACTCGG...GTTTTCTCTCACCTCTGCGCTCCTGTCCTTTGCTTCAGTGCTGCTGCTTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp GCTGGAGACCCAACTCCTGTGACAGGGTTCCGTTCCCAGCCTCTGCCCTTCAGATGGGTCACGTTCATATaGTTTTCTAGGTACCAGCGG +
Preference number: 4 (lower is better)
Translates to: AGDPTPVTGFRSQPLPFRWVTFI*FSRYQR
Trigger: CCGCTGGTACCTAGAAAAGCATATGAACGTGACCCA...TCTGAAGGGCAGAGGCTGGGAACGGAACCCTGTCACAGGAGTTGGGTCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp TCCTCCTGTCTCAGTTCTCATCTACCTGGGATTTCAGGCATACCCTCAGCCCAGGTCTGTCTGTGCAGCTaGAGCTCACTCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSCLSSHLPGISGIPSAQVCLCS*SSLSSR
Trigger: CCTGCTGGAGAGTGAGCTGCAGCTGCACAGACAGAC...CTGGGCTGAGGGTATGCCTGAAATCCCAGGTAGATGAGAACTGAGACAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp CGACTCAGCCGAGCACCTTGGGCCTGCCCACACCTGTACAGAATAAAGTGCTTCTGTGGCCAATGTGGATaGTCATGTGTGACCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RLSRAPWACPHLYRIKCFCGQCG*SCVTAA
Trigger: AGCTGCGGTCACACATGAGCATCCACATTGGCCACA...GAAGCACTTTATTCTGTACAGGTGTGGGCAGGCCCAAGGTGCTCGGCTGAGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 72 bp GTGACAGGGTTCCGTTCCCAGCCTCTGCCCTTCAGATaGCTGTTTACTGAGGAATGGCCAGGGTTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: VTGFRSQPLPFR*LFTEEWPGFLD
Trigger: GTCCAGAAACCCTGGCCATTCCTCAGTAAACAGCAATCTGAAGGGCAGAGGCTGGGAACGGAACCCTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR TCA 90 bp TCAGATGCCTACTGTCCCCACCCTGGGACCATGGGCGTGTCACACACAGGCAGGATCTTGTTGTGCTCATaGAGAGACCACAGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: SDAYCPHPGTMGVSHTGRILLCS*RDHSFL
Trigger: CAAGAAACTGTGGTCTCTTCATGAGCACAACAAGAT...CCTGCCTGTGTGTGACACGCCCATGGTCCCAGGGTGGGGACAGTAGGCATCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp TTTGAAAGCAGCAGCACTGAAGCAAAGGACAGGAGCGCAGAGGTGAGAGAAAACTGCATGCCATCCTCCTaGCCGAGCACCACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: FESSSTEAKDRSAEVRENCMPSS*PSTTVA
Trigger: AGCCACTGTGGTGCTCGGCCAGGAGGATGGCATGCA...GTTTTCTCTCACCTCTGCGCTCCTGTCCTTTGCTTCAGTGCTGCTGCTTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp TTTGAAAGCAGCAGCACTGAAGCAAAGGACAGGAGCGCAGAGGTGAGAGAAAACTCACCGGGCAGCGGGTaGCTGACACGGAAGCACTTT +
Preference number: 4 (lower is better)
Translates to: FESSSTEAKDRSAEVRENSPGSG*LTRKHF
Trigger: AAAGTGCTTCCGTGTCAGCCACCCGCTGCCCGGTGA...GTTTTCTCTCACCTCTGCGCTCCTGTCCTTTGCTTCAGTGCTGCTGCTTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 72 bp CCAATTCCACATCATGGGGATGGGGGCTTATTGCATTaGGCAGTTAGGGAGTGCAACCTTTGTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PIPHHGDGGLLH*AVRECNLCGQG
Trigger: GCCCTGCCCACAAAGGTTGCACTCCCTAACTGCCAAATGCAATAAGCCCCCATCCCCATGATGTGGAATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 72 bp GACTGGTCCTATGGATACCCTAAATACTCTTGGGACTaGTGCACTGGGATGCTGGGACACCTGCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: DWSYGYPKYSWD*CTGMLGHLPPF
Trigger: GAAGGGTGGCAGGTGTCCCAGCATCCCAGTGCACAAGTCCCAAGAGTATTTAGGGTATCCATAGGACCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 72 bp TCTCCCACAGACCTCACAGGGTCACAGGTGATGTCATaGAAGCAGGGATGGCTTGTCATAGCAGTGGGATCC +
Preference number: 4 (lower is better)
Translates to: SPTDLTGSQVMS*KQGWLVIAVGS
Trigger: GGATCCCACTGCTATGACAAGCCATCCCTGCTTCAATGACATCACCTGTGACCCTGTGAGGTCTGTGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR TCA 90 bp CTTTCTGTGACAGACCAACAGACCCACATGGAGCATGGGGCCCGTATAATCCCAACGTGCGCCATGGTGTaGAACTTCTTCTCGCAGATC +
Preference number: 4 (lower is better)
Translates to: LSVTDQQTHMEHGARIIPTCAMV*NFFSQI
Trigger: GATCTGCGAGAAGAAGTTTCACACCATGGCGCACGT...TGGGATTATACGGGCCCCATGCTCCATGTGGGTCTGTTGGTCTGTCACAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp TGGGGATTCCTGTACCTGCCTGGTAGGGATGTAAGAAAGGAAACCCATGGGGGCACTGGAAGCGTTCGTTaGAGTTCTCACAGCGGAAAG +
Preference number: 4 (lower is better)
Translates to: WGFLYLPGRDVRKETHGGTGSVR*SSHSGK
Trigger: CTTTCCGCTGTGAGAACTGCAACGAACGCTTCCAGT...GCCCCCATGGGTTTCCTTTCTTACATCCCTACCAGGCAGGTACAGGAATCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR GCA 90 bp TCCTCCTGTCTCAGTTCTCATCTACCTGGGATTTCAGGCATACCCTCAGCCCAGTTCTGGCACGGATGCTaGTGTTTTTCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSCLSSHLPGISGIPSAQFWHGC*CFSSSF
Trigger: GAAGCTGGAGGAAAAACAGCAGCATCCGTGCCAGAA...CTGGGCTGAGGGTATGCCTGAAATCCCAGGTAGATGAGAACTGAGACAGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR TCA 90 bp GCATTGCTAGGCTACAGCCCATGTCTCATTCTCCTTGTATCCAGCAGGCCTCAGGAGACCACAGTTTCTTaGAGGCTTTGCCACATGTCA +
Preference number: 4 (lower is better)
Translates to: ALLGYSPCLILLVSSRPQETTVS*RLCHMS
Trigger: TGACATGTGGCAAAGCCTTCAAGAAACTGTGGTCTC...CTGAGGCCTGCTGGATACAAGGAGAATGAGACATGGGCTGTAGCCTAGCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp TTCCAGGTCTTCTATGTCTTCATGAAGACTCCCCATCAACTGCTCCCAAGACCATGCGCACGTGCGCCATaGTGTGAAACTTCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: FQVFYVFMKTPHQLLPRPCARAP*CETSSR
Trigger: GCGAGAAGAAGTTTCACACCATGGCGCACGTGCGCA...TGGTCTTGGGAGCAGTTGATGGGGAGTCTTCATGAAGACATAGAAGACCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 72 bp CTGCCCACACCTGTACAGAATAAAGTGCTTCGTTTATaGATGATTAAAATGTCCCCAGCCCGCTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LPTPVQNKVLRL*MIKMSPARCPS
Trigger: GCTGGGACAGCGGGCTGGGGACATTTTAATCATCAATAAACGAAGCACTTTATTCTGTACAGGTGTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CCA 90 bp TTTGAAAGCAGCAGCACTGAAGCAAAGGACAGGAGCGCAGAGGTGAGAGAAAACGACACATGCAGTGTTTaGTTGTTAAGGTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: FESSSTEAKDRSAEVRENDTCSV*LLRFTS
Trigger: TGAGGTGAACCTTAACAACCAAACACTGCATGTGTC...GTTTTCTCTCACCTCTGCGCTCCTGTCCTTTGCTTCAGTGCTGCTGCTTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
3UTR CAA 72 bp CCATGTTCCAGTTCCCTCATGCTAACATTCAGGGACTaGACCATCTCTTTAAAAATAAAGTATATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PCSSSLMLTFRD*TISLKIKYIAG
Trigger: CCCAGCTATATACTTTATTTTTAAAGAGATGGTCAAGTCCCTGAATGTTAGCATGAGGGAACTGGAACATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS GCA 90 bp GTGTCCAGCCTGGGAGGTGCTGTGGGGAAGAGCGGAGCTGTGGGCTaGAGATGCGTGGCAGGCAGGGTGGCGGGGTCACCGGGCAGCGGG +
Preference number: 5 (lower is better)
Translates to: VSSLGGAVGKSGAVG*RCVAGRVAGSPGSG
Trigger: CCCGCTGCCCGGTGACCCCGCCACCCTGCCTGCCACGCATCTGCAGCCCACAGCTCCGCTCTTCCCCACAGCACCTCCCAGGCTGGACAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS CCA 90 bp GCCACAGGGCCCGAGGGCGCCAAGGATCGAGCGTCCAGCAGCTCCTaGCAGGAGGCCGCGATGTCAGCCATCTGCAGCAGCGAGGCCGCG +
Preference number: 5 (lower is better)
Translates to: ATGPEGAKDRASSSS*QEAAMSAICSSEAA
Trigger: CGCGGCCTCGCTGCTGCAGATGGCTGACATCGCGGCCTCCTGCCAGGAGCTGCTGGACGCTCGATCCTTGGCGCCCTCGGGCCCTGTGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 90 bp CGAGCGTCCAGCAGCTCCTGGCAGGAGGCCGCGATGTCAGCCATCTaGAGCAGCGAGGCCGCGCTGAGCACCTCGTGCACGTTGGCCGCG +
Preference number: 5 (lower is better)
Translates to: RASSSSWQEAAMSAI*SSEAALSTSCTLAA
Trigger: CGCGGCCAACGTGCACGAGGTGCTCAGCGCGGCCTCGCTGCTGCAGATGGCTGACATCGCGGCCTCCTGCCAGGAGCTGCTGGACGCTCG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 90 bp GTAGTAGGGTGGTGGAGGCACCGGAGCACAGCTGGTGGCAGGCTGTaGCAGGGCCACAGGGCCCGAGGGCGCCAAGGATCGAGCGTCCAG +
Preference number: 5 (lower is better)
Translates to: VVGWWRHRSTAGGRL*QGHRARGRQGSSVQ
Trigger: CTGGACGCTCGATCCTTGGCGCCCTCGGGCCCTGTGGCCCTGGCACAGCCTGCCACCAGCTGTGCTCCGGTGCCTCCACCACCCTACTAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS TCA 90 bp GGCAGGAGGCCGCGATGTCAGCCATCTGCAGCAGCGAGGCCGCGCTaGGCACCTCGTGCACGTTGGCCGCGTTCACGAGCAGCTTGGACG +
Preference number: 5 (lower is better)
Translates to: GRRPRCQPSAAARPR*APRARWPRSRAAWT
Trigger: CGTCCAAGCTGCTCGTGAACGCGGCCAACGTGCACGAGGTGCTCAGCGCGGCCTCGCTGCTGCAGATGGCTGACATCGCGGCCTCCTGCC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS TCA 90 bp CGTGTGGACATTCGGCTATGTGGTGGAGGGTCCACCTGGCTGCCCTaGCACCCAGCGGGACCTGCGGGGTCCTGCCTGCCCTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: RVDIRLCGGGSTWLP*HPAGPAGSCLPSAS
Trigger: GGAGGCTGAGGGCAGGCAGGACCCCGCAGGTCCCGCTGGGTGTCAGGGCAGCCAGGTGGACCCTCCACCACATAGCCGAATGTCCACACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS-3UTR CAA 90 bp CCAGCCCCTTGGGCACAGGCCTCTTCCAAGTGTGGCCATGCTGGGAGCGGCTGGAGCACCTCGTGCACGTaGGCCGCGTTCACGAGCAGC +
Preference number: 5 (lower is better)
Translates to: PAPWAQASSKCGHAGSGWSTSCT*AAFTSS
Trigger: GCTGCTCGTGAACGCGGCCAACGTGCACGAGGTGCT...CCAGCCGCTCCCAGCATGGCCACACTTGGAAGAGGCCTGTGCCCAAGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CAA 90 bp CCAGCCCCTTGGGCACAGGCCTCTTCCAAGTGTGGCCATGCTGGGAGCGGCTGGACCCGCTGCAGCTGCTaGTTCTGTGTGAAGAGCGAG +
Preference number: 5 (lower is better)
Translates to: PAPWAQASSKCGHAGSGWTRCSC*FCVKSE
Trigger: CTCGCTCTTCACACAGAACAAGCAGCTGCAGCGGGT...CCAGCCGCTCCCAGCATGGCCACACTTGGAAGAGGCCTGTGCCCAAGGGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CAA 90 bp TGCCTCCAGCACCCCTCGCCTGGAGGGGTGCAGCCAACCAGTCCCTCTCTGTTCACCACAGTGGCTGGATaGGCACCAGAGCCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: CLQHPSPGGVQPTSPSLFTTVAG*APEPGL
Trigger: CAAGCCAGGCTCTGGTGCCAATCCAGCCACTGTGGT...GAACAGAGAGGGACTGGTTGGCTGCACCCCTCCAGGCGAGGGGTGCTGGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS TCA 90 bp CTAGGTCCACATCGCACAGGTCTGGCTGGAAGAGGCGCTGCTCATTaGGGCGGCCCATCAAGCAGGCGAAGTGCAGGGCCACGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: LGPHRTGLAGRGAAH*GGPSSRRSAGPRPP
Trigger: TGGAGGACGTGGCCCTGCACTTCGCCTGCTTGATGGGCCGCCTCAATGAGCAGCGCCTCTTCCAGCCAGACCTGTGCGATGTGGACCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 90 bp ACCAGCACTAGGTCCACATCGCACAGGTCTGGCTGGAAGAGGCGCTaGTCATTGAGGCGGCCCATCAAGCAGGCGAAGTGCAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: TSTRSTSHRSGWKRR*SLRRPIKQAKCRAT
Trigger: CGTGGCCCTGCACTTCGCCTGCTTGATGGGCCGCCTCAATGAGCAGCGCCTCTTCCAGCCAGACCTGTGCGATGTGGACCTAGTGCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 90 bp ATCGGGGCCCTCCCGGGCATAGATCTTTGGGAGGCCTGGGGCATCTaGCTCCTGCTTGATGTCACAGTAGTAGGGTGGTGGAGGCACCGG +
Preference number: 5 (lower is better)
Translates to: IGALPGIDLWEAWGI*LLLDVTVVGWWRHR
Trigger: CCGGTGCCTCCACCACCCTACTACTGTGACATCAAGCAGGAGGCAGATGCCCCAGGCCTCCCAAAGATCTATGCCCGGGAGGGCCCCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CCA 90 bp GGCACTTCTGGCACGGATGCTGCTGTTTTTCCTCCAGCTTCACCTTaGCCCCCAGCCCGTCAGCTGCCTGGGATGCCGGAACAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: GTSGTDAAVFPPASP*PPARQLPGMPEQLQ
Trigger: CTGGAGCTGTTCCGGCATCCCAGGCAGCTGACGGGCTGGGGGCCAAGGTGAAGCTGGAGGAAAAACAGCAGCATCCGTGCCAGAAGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS-3UTR CAA 90 bp CCAGCCCCTTGGGCACAGGCCTCTTCCAAGTGTGGCCATGCTGGGAGCGGCTGGAGCGACATACTGCGCTaGAAGGACTTCCCACAGGTC +
Preference number: 5 (lower is better)
Translates to: PAPWAQASSKCGHAGSGWSDILR*KDFPQV
Trigger: GACCTGTGGGAAGTCCTTCAAGCGCAGTATGTCGCT...CCAGCCGCTCCCAGCATGGCCACACTTGGAAGAGGCCTGTGCCCAAGGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS TCA 90 bp GATGCGTGGCAGGCAGGGTGGCGGGGTCACCGGGCAGCGGGTGGCTaGCACGGAAGCACTTTTCTTTGTGTGCCTTCAGCATGTTGGAGA +
Preference number: 5 (lower is better)
Translates to: DAWQAGWRGHRAAGG*HGSTFLCVPSACWR
Trigger: TCTCCAACATGCTGAAGGCACACAAAGAAAAGTGCTTCCGTGTCAGCCACCCGCTGCCCGGTGACCCCGCCACCCTGCCTGCCACGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS GCA 90 bp TGCAGGCCGCTGGGCGCGAGTGCCTCCAGAGATAGCTCGACCCGCTaGAGCTGCTTGTTCTGTGTGAAGAGCGAGTGGAAGAACTGGCTG +
Preference number: 5 (lower is better)
Translates to: CRPLGASASRDSSTR*SCLFCVKSEWKNWL
Trigger: CAGCCAGTTCTTCCACTCGCTCTTCACACAGAACAAGCAGCTGCAGCGGGTCGAGCTATCTCTGGAGGCACTCGCGCCCAGCGGCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 90 bp CACTCCCTCCTCCTTCCTCCTCCTCTTCTTCCGAGTGTCCCTGCATaGCATCCTCCTGGCCGAGCACCACAGTGGCTGGATTGGCACCAG +
Preference number: 5 (lower is better)
Translates to: HSLLLPPPLLPSVPA*HPPGRAPQWLDWHQ
Trigger: CTGGTGCCAATCCAGCCACTGTGGTGCTCGGCCAGGAGGATGGCATGCAGGGACACTCGGAAGAAGAGGAGGAGGAAGGAGGAGGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 90 bp CAAGCAGGCGAAGTGCAGGGCCACGTCCTCCACCAGCGAGAACTCTaGCGCCGGGGAGTCTGTCGTCTTCTCAACCAGCAACTGGAACAG +
Preference number: 5 (lower is better)
Translates to: QAGEVQGHVLHQREL*RRGVCRLLNQQLEQ
Trigger: CTGTTCCAGTTGCTGGTTGAGAAGACGACAGACTCCCCGGCGGCAGAGTTCTCGCTGGTGGAGGACGTGGCCCTGCACTTCGCCTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214732.2
CDS CCA 90 bp CCTTCCTCCTCCTCTTCTTCCGAGTGTCCCTGCATGCCATCCTCCTaGCCGAGCACCACAGTGGCTGGATTGGCACCAGAGCCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: PSSSSSSECPCMPSS*PSTTVAGLAPEPGL
Trigger: CAAGCCAGGCTCTGGTGCCAATCCAGCCACTGTGGTGCTCGGCCAGGAGGATGGCATGCAGGGACACTCGGAAGAAGAGGAGGAGGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CCA 90 bp GGTGAAGGGCATGTCCTTGGTGTGGGTGTGTCCAGGTCTGACCCCTaGGGGAGGTTGCACTCAGGCGATGCCTCAAGCCCAACCATGTGC +
Preference number: 5 (lower is better)
Translates to: GEGHVLGVGVSRSDP*GRLHSGDASSPTMC
Trigger: GCACATGGTTGGGCTTGAGGCATCGCCTGAGTGCAACCTCCCCCAGGGGTCAGACCTGGACACACCCACACCAAGGACATGCCCTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214732.2
CDS-3UTR CAA 90 bp TCAACCCTTCCGTGCCCAGAAGACAGCCGACTCAGCCGAGCACCTTGGGCCTGCAGGTACCAGCGGTTGTaGAAGACCCGAGGGCACTTC +
Preference number: 5 (lower is better)
Translates to: STLPCPEDSRLSRAPWACRYQRL*KTRGHF
Trigger: GAAGTGCCCTCGGGTCTTCAACAACCGCTGGTACCT...GCAGGCCCAAGGTGCTCGGCTGAGTCGGCTGTCTTCTGGGCACGGAAGGGTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS CCA 90 bp AAGGACTTCCCACAGGTCTCACAGGTGAAGGGCATGTCCTTGGTGTaGGTGTGTCCAGGTCTGACCCCTGGGGGAGGTTGCACTCAGGCG +
Preference number: 5 (lower is better)
Translates to: KDFPQVSQVKGMSLV*VCPGLTPGGGCTQA
Trigger: CGCCTGAGTGCAACCTCCCCCAGGGGTCAGACCTGGACACACCCACACCAAGGACATGCCCTTCACCTGTGAGACCTGTGGGAAGTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214732.2
CDS-3UTR CAA 90 bp GCTGGAGACCCAACTCCTGTGACAGGGTTCCGTTCCCAGCCTCTGCCCTTCAGAAAGAGGCGCTGCTCATaGAGGCGGCCCATCAAGCAG +
Preference number: 5 (lower is better)
Translates to: AGDPTPVTGFRSQPLPFRKRRCS*RRPIKQ
Trigger: CTGCTTGATGGGCCGCCTCAATGAGCAGCGCCTCTT...TCTGAAGGGCAGAGGCTGGGAACGGAACCCTGTCACAGGAGTTGGGTCTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CAA 90 bp CCAGCCCCTTGGGCACAGGCCTCTTCCAAGTGTGGCCATGCTGGGAGCGGCTGGTACTGGAAGCGTTCGTaGCAGTTCTCACAGCGGAAA +
Preference number: 5 (lower is better)
Translates to: PAPWAQASSKCGHAGSGWYWKRS*QFSQRK
Trigger: TTTCCGCTGTGAGAACTGCAACGAACGCTTCCAGTA...CCAGCCGCTCCCAGCATGGCCACACTTGGAAGAGGCCTGTGCCCAAGGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CAA 90 bp TCAACCCTTCCGTGCCCAGAAGACAGCCGACTCAGCCGAGCACCTTGGGCCTGCGACCGCAGCTGGTACTaGTACTGGAAGCGTTCGTTG +
Preference number: 5 (lower is better)
Translates to: STLPCPEDSRLSRAPWACDRSWY*YWKRSL
Trigger: CAACGAACGCTTCCAGTACAAGTACCAGCTGCGGTC...GCAGGCCCAAGGTGCTCGGCTGAGTCGGCTGTCTTCTGGGCACGGAAGGGTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS TCA 90 bp GCATCCTGCTCACTGGGCCCATCTTCTTCATCCTCATCCTCTCGATaGTCGCTGGGCCCTTCCTCCTCTTCCTCCTCCTCCTCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: ASCSLGPSSSSSSSR*SLGPSSSSSSSSPW
Trigger: CCAGGGAGAGGAGGAGGAGGAAGAGGAGGAAGGGCCCAGCGATCATCGAGAGGATGAGGATGAAGAAGATGGGCCCAGTGAGCAGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 90 bp TACCAGCGGTTGTTGAAGACCCGAGGGCACTTCTGGCACGGATGCTaGTGTTTTTCCTCCAGCTTCACCTTGGCCCCCAGCCCGTCAGCT +
Preference number: 5 (lower is better)
Translates to: YQRLLKTRGHFWHGC*CFSSSFTLAPSPSA
Trigger: AGCTGACGGGCTGGGGGCCAAGGTGAAGCTGGAGGAAAAACAGCAGCATCCGTGCCAGAAGTGCCCTCGGGTCTTCAACAACCGCTGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 90 bp GTCATGCACTGGATGTTGCGCTCACAGTCCGTCTGTCTGTGCAGCTaGAGCTCACTCTCCAGCAGGAAGCGCTTCCCACACTGGCCACAG +
Preference number: 5 (lower is better)
Translates to: VMHWMLRSQSVCLCS*SSLSSRKRFPHWPQ
Trigger: CTGTGGCCAGTGTGGGAAGCGCTTCCTGCTGGAGAGTGAGCTGCAGCTGCACAGACAGACGGACTGTGAGCGCAACATCCAGTGCATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS-3UTR CAA 90 bp CGACTCAGCCGAGCACCTTGGGCCTGCCCACACCTGTACAGAATAAAGTGCTTCCCCGGGCATAGATCTTaGGGAGGCCTGGGGCATCTG +
Preference number: 5 (lower is better)
Translates to: RLSRAPWACPHLYRIKCFPGHRS*GGLGHL
Trigger: CAGATGCCCCAGGCCTCCCAAAGATCTATGCCCGGG...GAAGCACTTTATTCTGTACAGGTGTGGGCAGGCCCAAGGTGCTCGGCTGAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CAA 90 bp CAGGCACACAGGGGCCTCAGAGAGAGGGCTGTGCCCCCATCCCAGACAGAGCCCAGTTTCTTGAAGGCTTaGCCACATGTCATGCACTGG +
Preference number: 5 (lower is better)
Translates to: QAHRGLRERAVPPSQTEPSFLKA*PHVMHW
Trigger: CCAGTGCATGACATGTGGCAAAGCCTTCAAGAAACT...GGGCTCTGTCTGGGATGGGGGCACAGCCCTCTCTCTGAGGCCCCTGTGTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS GCA 90 bp CCACATGTCATGCACTGGATGTTGCGCTCACAGTCCGTCTGTCTGTaGAGCTGCAGCTCACTCTCCAGCAGGAAGCGCTTCCCACACTGG +
Preference number: 5 (lower is better)
Translates to: PHVMHWMLRSQSVCL*SCSSLSSRKRFPHW
Trigger: CCAGTGTGGGAAGCGCTTCCTGCTGGAGAGTGAGCTGCAGCTGCACAGACAGACGGACTGTGAGCGCAACATCCAGTGCATGACATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CCA 90 bp CCTCAGCCTCCCTCTCCTCCTCAGAACTCTCTGCATCCTGCTCACTaGGCCCATCTTCTTCATCCTCATCCTCTCGATGATCGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PQPPSPPQNSLHPAH*AHLLHPHPLDDRWA
Trigger: GGCCCAGCGATCATCGAGAGGATGAGGATGAAGAAGATGGGCCCAGTGAGCAGGATGCAGAGAGTTCTGAGGAGGAGAGGGAGGCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS-3UTR CAA 90 bp CGACTCAGCCGAGCACCTTGGGCCTGCCCACACCTGTACAGAATAAAGTGCTTCTCTAGGTACCAGCGGTaGTTGAAGACCCGAGGGCAC +
Preference number: 5 (lower is better)
Translates to: RLSRAPWACPHLYRIKCFSRYQR*LKTRGH
Trigger: GTGCCCTCGGGTCTTCAACAACCGCTGGTACCTAGA...GAAGCACTTTATTCTGTACAGGTGTGGGCAGGCCCAAGGTGCTCGGCTGAGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS GCA 90 bp AGCTCACTCTCCAGCAGGAAGCGCTTCCCACACTGGCCACAGATCTaGATCCGGCTGTGGGTCACGTTCATATGCTTTTCTAGGTACCAG +
Preference number: 5 (lower is better)
Translates to: SSLSSRKRFPHWPQI*IRLWVTFICFSRYQ
Trigger: CTGGTACCTAGAAAAGCATATGAACGTGACCCACAGCCGGATGCAGATCTGTGGCCAGTGTGGGAAGCGCTTCCTGCTGGAGAGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS-3UTR CAA 90 bp TGGGGATTCCTGTACCTGCCTGGTAGGGATGTAAGAAAGGAAACCCATGGGGGCCCTTCCTTCTCCTCCTaGAAGAGTGTCTGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: WGFLYLPGRDVRKETHGGPSFSS*KSVCAG
Trigger: GCCAGCACAGACACTCTTCAAGGAGGAGAAGGAAGG...GCCCCCATGGGTTTCCTTTCTTACATCCCTACCAGGCAGGTACAGGAATCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS CCA 90 bp CCAGAGCCTGGCTTGCCCTCGGGTCCGGTGGACACATGCAGTGTTTaGTTGTTAAGGTTCACCTCAACAATGATTTGTGACTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PEPGLPSGPVDTCSV*LLRFTSTMICDCSW
Trigger: CCAGGAGCAGTCACAAATCATTGTTGAGGTGAACCTTAACAACCAAACACTGCATGTGTCCACCGGACCCGAGGGCAAGCCAGGCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 90 bp GGATTGGCACCAGAGCCTGGCTTGCCCTCGGGTCCGGTGGACACATaGAGTGTTTGGTTGTTAAGGTTCACCTCAACAATGATTTGTGAC +
Preference number: 5 (lower is better)
Translates to: GLAPEPGLPSGPVDT*SVWLLRFTSTMICD
Trigger: GTCACAAATCATTGTTGAGGTGAACCTTAACAACCAAACACTGCATGTGTCCACCGGACCCGAGGGCAAGCCAGGCTCTGGTGCCAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS-3UTR CAA 90 bp TTCCAGGTCTTCTATGTCTTCATGAAGACTCCCCATCAACTGCTCCCAAGACCAGTGAAGGGCATGTCCTaGGTGTGGGCAACCATGTGC +
Preference number: 5 (lower is better)
Translates to: FQVFYVFMKTPHQLLPRPVKGMS*VWATMC
Trigger: GCACATGGTTGCCCACACCAAGGACATGCCCTTCAC...TGGTCTTGGGAGCAGTTGATGGGGAGTCTTCATGAAGACATAGAAGACCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS-3UTR CAA 90 bp TGGGGATTCCTGTACCTGCCTGGTAGGGATGTAAGAAAGGAAACCCATGGGGGCCGGAAGCACTTTTCTTaGTGTGCCTTCAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: WGFLYLPGRDVRKETHGGRKHFS*CAFSML
Trigger: CAACATGCTGAAGGCACACAAAGAAAAGTGCTTCCG...GCCCCCATGGGTTTCCTTTCTTACATCCCTACCAGGCAGGTACAGGAATCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS TCA 90 bp CACATGCAGTGTTTGGTTGTTAAGGTTCACCTCAACAATGATTTGTaGCTGCTCCTGGTGCCCATAGGTGCCCGAGGCATCCAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: HMQCLVVKVHLNNDL*LLLVPIGARGIQFW
Trigger: CCAGAACTGGATGCCTCGGGCACCTATGGGCACCAGGAGCAGTCACAAATCATTGTTGAGGTGAACCTTAACAACCAAACACTGCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS-3UTR CAA 90 bp CTTTCTGTGACAGACCAACAGACCCACATGGAGCATGGGGCCCGTATAATCCCAGGACACATGCAGTGTTaGGTTGTTAAGGTTCACCTC +
Preference number: 5 (lower is better)
Translates to: LSVTDQQTHMEHGARIIPGHMQC*VVKVHL
Trigger: GAGGTGAACCTTAACAACCAAACACTGCATGTGTCC...TGGGATTATACGGGCCCCATGCTCCATGTGGGTCTGTTGGTCTGTCACAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS TCA 90 bp AGCCGTGCACTATCTTGTTGTGCTCATGAAGAGACCACAGTTTCTTaGAGGCTTTGCCACATGTCATGCACTGGATGTTGCGCTCACAGT +
Preference number: 5 (lower is better)
Translates to: SRALSCCAHEETTVS*RLCHMSCTGCCAHS
Trigger: ACTGTGAGCGCAACATCCAGTGCATGACATGTGGCAAAGCCTTCAAGAAACTGTGGTCTCTTCATGAGCACAACAAGATAGTGCACGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS-3UTR CAA 90 bp CAGTTCCCTCATGCTAACATTCAGGGACTTGACCATCTCTTTAAAAATAAAGTAACATGCAGTGTTTGGTaGTTAAGGTTCACCTCAACA +
Preference number: 5 (lower is better)
Translates to: QFPHANIQGLDHLFKNKVTCSVW*LRFTST
Trigger: TGTTGAGGTGAACCTTAACAACCAAACACTGCATGT...TACTTTATTTTTAAAGAGATGGTCAAGTCCCTGAATGTTAGCATGAGGGAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS GCA 72 bp CGAGGGGCCCTCCGCGCAGCCTCGGCGCTGGGAAGATaGAGCTCGGCTTGCGGAACGCTGCTCTGGCACCNN +
Preference number: 6 (lower is better)
Translates to: RGALRAASALGR*SSACGTLLWHX
Trigger: NNGGTGCCAGAGCAGCGTTCCGCAAGCCGAGCTGCATCTTCCCAGCGCCGAGGCTGCGCGGAGGGCCCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214732.2
CDS CCA 72 bp GCCGCCGGGGAGTCTGTCGTCTTCTCAACCAGCAACTaGAACAGCCGGGTGGGGGCCAGAGGCCCAGGCCCG +
Preference number: 6 (lower is better)
Translates to: AAGESVVFSTSN*NSRVGARGPGP
Trigger: CGGGCCTGGGCCTCTGGCCCCCACCCGGCTGTTCCAGTTGCTGGTTGAGAAGACGACAGACTCCCCGGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214732.2
CDS TCA 72 bp ATTCGGCTATGTGGTGGAGGGTCCACCTGGCTGCCCTaGCACCCAGCGGGACCTGCGGGGTCCTGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: IRLCGGGSTWLP*HPAGPAGSCLP
Trigger: GGGCAGGCAGGACCCCGCAGGTCCCGCTGGGTGTCAGGGCAGCCAGGTGGACCCTCCACCACATAGCCGAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CCA 72 bp CCCGAGGGCGCCAAGGATCGAGCGTCCAGCAGCTCCTaGCAGGAGGCCGCGATGTCAGCCATCTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: PEGAKDRASSSS*QEAAMSAICSS
Trigger: GCTGCTGCAGATGGCTGACATCGCGGCCTCCTGCCAGGAGCTGCTGGACGCTCGATCCTTGGCGCCCTCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CCA 72 bp TGGCCCGGCGCCGGGTGTTCTGTCCCCGGGACCGTGTaGACATTCGGCTATGTGGTGGAGGGTCCACCTGGC +
Preference number: 6 (lower is better)
Translates to: WPGAGCSVPGTV*TFGYVVEGPPG
Trigger: GCCAGGTGGACCCTCCACCACATAGCCGAATGTCCACACGGTCCCGGGGACAGAACACCCGGCGCCGGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS TCA 72 bp CCGCGATGTCAGCCATCTGCAGCAGCGAGGCCGCGCTaGGCACCTCGTGCACGTTGGCCGCGTTCACGAGCA +
Preference number: 6 (lower is better)
Translates to: PRCQPSAAARPR*APRARWPRSRA
Trigger: TGCTCGTGAACGCGGCCAACGTGCACGAGGTGCTCAGCGCGGCCTCGCTGCTGCAGATGGCTGACATCGCGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CCA 72 bp TGCCATCCTCCTGGCCGAGCACCACAGTGGCTGGATTaGCACCAGAGCCTGGCTTGCCCTCGGGTCCGGTGG +
Preference number: 6 (lower is better)
Translates to: CHPPGRAPQWLD*HQSLACPRVRW
Trigger: CCACCGGACCCGAGGGCAAGCCAGGCTCTGGTGCCAATCCAGCCACTGTGGTGCTCGGCCAGGAGGATGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CCA 72 bp TCCAGCTTCACCTTGGCCCCCAGCCCGTCAGCTGCCTaGGATGCCGGAACAGCTCCAGAGGCCTTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: SSFTLAPSPSAA*DAGTAPEALGL
Trigger: GAGGCCCAAGGCCTCTGGAGCTGTTCCGGCATCCCAGGCAGCTGACGGGCTGGGGGCCAAGGTGAAGCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 72 bp TTCCTCCAGCTTCACCTTGGCCCCCAGCCCGTCAGCTaGCTGGGATGCCGGAACAGCTCCAGAGGCCTTGGG +
Preference number: 6 (lower is better)
Translates to: FLQLHLGPQPVS*LGCRNSSRGLG
Trigger: CCCAAGGCCTCTGGAGCTGTTCCGGCATCCCAGGCAGCTGACGGGCTGGGGGCCAAGGTGAAGCTGGAGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CAA 72 bp ATGCCATCCTCCTGGCCGAGCACCACAGTGGCTGGATaGGCACCAGAGCCTGGCTTGCCCTCGGGTCCGGTG +
Preference number: 6 (lower is better)
Translates to: MPSSWPSTTVAG*APEPGLPSGPV
Trigger: CACCGGACCCGAGGGCAAGCCAGGCTCTGGTGCCAATCCAGCCACTGTGGTGCTCGGCCAGGAGGATGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS TCA 72 bp CATCGCACAGGTCTGGCTGGAAGAGGCGCTGCTCATTaGGGCGGCCCATCAAGCAGGCGAAGTGCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: HRTGLAGRGAAH*GGPSSRRSAGP
Trigger: TGGCCCTGCACTTCGCCTGCTTGATGGGCCGCCTCAATGAGCAGCGCCTCTTCCAGCCAGACCTGTGCGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS TCA 72 bp CAGGCAGGGTGGCGGGGTCACCGGGCAGCGGGTGGCTaGCACGGAAGCACTTTTCTTTGTGTGCCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: QAGWRGHRAAGG*HGSTFLCVPSA
Trigger: TGCTGAAGGCACACAAAGAAAAGTGCTTCCGTGTCAGCCACCCGCTGCCCGGTGACCCCGCCACCCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS CAA 72 bp ACATCGCACAGGTCTGGCTGGAAGAGGCGCTGCTCATaGAGGCGGCCCATCAAGCAGGCGAAGTGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: TSHRSGWKRRCS*RRPIKQAKCRA
Trigger: GGCCCTGCACTTCGCCTGCTTGATGGGCCGCCTCAATGAGCAGCGCCTCTTCCAGCCAGACCTGTGCGATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CAA 90 bp ACTAGGTCCACATCGCACAGGTCTGGCTGGAAGAGGCGCTGCTCATaGAGGCGGCCCATCAAGCAGGCGAAGTGCAGGGCCACGTCCTCC +
Preference number: 6 (lower is better)
Translates to: TRSTSHRSGWKRRCS*RRPIKQAKCRATSS
Trigger: GGAGGACGTGGCCCTGCACTTCGCCTGCTTGATGGGCCGCCTCAATGAGCAGCGCCTCTTCCAGCCAGACCTGTGCGATGTGGACCTAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CAA 90 bp GGGCACTTCTGGCACGGATGCTGCTGTTTTTCCTCCAGCTTCACCTaGGCCCCCAGCCCGTCAGCTGCCTGGGATGCCGGAACAGCTCCA +
Preference number: 6 (lower is better)
Translates to: GHFWHGCCCFSSSFT*APSPSAAWDAGTAP
Trigger: TGGAGCTGTTCCGGCATCCCAGGCAGCTGACGGGCTGGGGGCCAAGGTGAAGCTGGAGGAAAAACAGCAGCATCCGTGCCAGAAGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 72 bp GAAGTGCAGGGCCACGTCCTCCACCAGCGAGAACTCTaGCGCCGGGGAGTCTGTCGTCTTCTCAACCAGCAA +
Preference number: 6 (lower is better)
Translates to: EVQGHVLHQREL*RRGVCRLLNQQ
Trigger: TTGCTGGTTGAGAAGACGACAGACTCCCCGGCGGCAGAGTTCTCGCTGGTGGAGGACGTGGCCCTGCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 72 bp AGGTCCACATCGCACAGGTCTGGCTGGAAGAGGCGCTaGTCATTGAGGCGGCCCATCAAGCAGGCGAAGTGC +
Preference number: 6 (lower is better)
Translates to: RSTSHRSGWKRR*SLRRPIKQAKC
Trigger: GCACTTCGCCTGCTTGATGGGCCGCCTCAATGAGCAGCGCCTCTTCCAGCCAGACCTGTGCGATGTGGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 72 bp CCAGTTCTGGCTCCAGCCCCTCTCCACTTTCCAGTTTaGACAGGCTACCTGGGGCCTCTGCCTCTTCAGGGG +
Preference number: 6 (lower is better)
Translates to: PVLAPAPLHFPV*TGYLGPLPLQG
Trigger: CCCCTGAAGAGGCAGAGGCCCCAGGTAGCCTGTGCAAACTGGAAAGTGGAGAGGGGCTGGAGCCAGAACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 72 bp GCACCACAGTGGCTGGATTGGCACCAGAGCCTGGCTTaGCCTCGGGTCCGGTGGACACATGCAGTGTTTGGT +
Preference number: 6 (lower is better)
Translates to: APQWLDWHQSLA*PRVRWTHAVFG
Trigger: ACCAAACACTGCATGTGTCCACCGGACCCGAGGGCAAGCCAGGCTCTGGTGCCAATCCAGCCACTGTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 72 bp CCTCCTCCTTCCTCCTCCTCTTCTTCCGAGTGTCCCTaGATGCCATCCTCCTGGCCGAGCACCACAGTGGCT +
Preference number: 6 (lower is better)
Translates to: PPPSSSSSSECP*MPSSWPSTTVA
Trigger: AGCCACTGTGGTGCTCGGCCAGGAGGATGGCATGCAGGGACACTCGGAAGAAGAGGAGGAGGAAGGAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CCA 72 bp GGCACCAGCACTAGGTCCACATCGCACAGGTCTGGCTaGAAGAGGCGCTGCTCATTGAGGCGGCCCATCAAG +
Preference number: 6 (lower is better)
Translates to: GTSTRSTSHRSG*KRRCSLRRPIK
Trigger: CTTGATGGGCCGCCTCAATGAGCAGCGCCTCTTCCAGCCAGACCTGTGCGATGTGGACCTAGTGCTGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS TCA 72 bp GCCAGCACACCCTTGTGTGCGGGGAACACGCTATGCTaGGGCACCAGCACTAGGTCCACATCGCACAGGTCT +
Preference number: 6 (lower is better)
Translates to: ASTPLCAGNTLC*GTSTRSTSHRS
Trigger: AGACCTGTGCGATGTGGACCTAGTGCTGGTGCCTCAGCATAGCGTGTTCCCCGCACACAAGGGTGTGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 72 bp CTGGGCGCGAGTGCCTCCAGAGATAGCTCGACCCGCTaGAGCTGCTTGTTCTGTGTGAAGAGCGAGTGGAAG +
Preference number: 6 (lower is better)
Translates to: LGASASRDSSTR*SCLFCVKSEWK
Trigger: CTTCCACTCGCTCTTCACACAGAACAAGCAGCTGCAGCGGGTCGAGCTATCTCTGGAGGCACTCGCGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 72 bp CTCCTTCCTCCTCCTCTTCTTCCGAGTGTCCCTGCATaGCATCCTCCTGGCCGAGCACCACAGTGGCTGGAT +
Preference number: 6 (lower is better)
Translates to: LLPPPLLPSVPA*HPPGRAPQWLD
Trigger: ATCCAGCCACTGTGGTGCTCGGCCAGGAGGATGGCATGCAGGGACACTCGGAAGAAGAGGAGGAGGAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CAA 72 bp TCCAGTTCTGGCTCCAGCCCCTCTCCACTTTCCAGTTaGCACAGGCTACCTGGGGCCTCTGCCTCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: SSSGSSPSPLSS*HRLPGASASSG
Trigger: CCCTGAAGAGGCAGAGGCCCCAGGTAGCCTGTGCAAACTGGAAAGTGGAGAGGGGCTGGAGCCAGAACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CAA 72 bp GACTTCCCACAGGTCTCACAGGTGAAGGGCATGTCCTaGGTGTGGGTGTGTCCAGGTCTGACCCCTGGGGGA +
Preference number: 6 (lower is better)
Translates to: DFPQVSQVKGMS*VWVCPGLTPGG
Trigger: TCCCCCAGGGGTCAGACCTGGACACACCCACACCAAGGACATGCCCTTCACCTGTGAGACCTGTGGGAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214732.2
CDS GCA 72 bp CTCCCGGGCATAGATCTTTGGGAGGCCTGGGGCATCTaGCTCCTGCTTGATGTCACAGTAGTAGGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: LPGIDLWEAWGI*LLLDVTVVGWW
Trigger: CCACCACCCTACTACTGTGACATCAAGCAGGAGGCAGATGCCCCAGGCCTCCCAAAGATCTATGCCCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 72 bp CGGTTGTTGAAGACCCGAGGGCACTTCTGGCACGGATaGTGCTGTTTTTCCTCCAGCTTCACCTTGGCCCCC +
Preference number: 6 (lower is better)
Translates to: RLLKTRGHFWHG*CCFSSSFTLAP
Trigger: GGGGGCCAAGGTGAAGCTGGAGGAAAAACAGCAGCATCCGTGCCAGAAGTGCCCTCGGGTCTTCAACAACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 72 bp TGGATGTTGCGCTCACAGTCCGTCTGTCTGTGCAGCTaGAGCTCACTCTCCAGCAGGAAGCGCTTCCCACAC +
Preference number: 6 (lower is better)
Translates to: WMLRSQSVCLCS*SSLSSRKRFPH
Trigger: GTGTGGGAAGCGCTTCCTGCTGGAGAGTGAGCTGCAGCTGCACAGACAGACGGACTGTGAGCGCAACATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 72 bp GCGAGTGCCTCCAGAGATAGCTCGACCCGCTGCAGCTaGTTGTTCTGTGTGAAGAGCGAGTGGAAGAACTGG +
Preference number: 6 (lower is better)
Translates to: ASASRDSSTRCS*LFCVKSEWKNW
Trigger: CCAGTTCTTCCACTCGCTCTTCACACAGAACAAGCAGCTGCAGCGGGTCGAGCTATCTCTGGAGGCACTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 72 bp ATGCACTGGATGTTGCGCTCACAGTCCGTCTGTCTGTaGAGCTGCAGCTCACTCTCCAGCAGGAAGCGCTTC +
Preference number: 6 (lower is better)
Translates to: MHWMLRSQSVCL*SCSSLSSRKRF
Trigger: GAAGCGCTTCCTGCTGGAGAGTGAGCTGCAGCTGCACAGACAGACGGACTGTGAGCGCAACATCCAGTGCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 72 bp CAGTTCTCACAGCGGAAAGGTTTCTCCCCCGAGTGCTaGAGCGAGTGGACCTTCAGCGACATACTGCGCTTG +
Preference number: 6 (lower is better)
Translates to: QFSQRKGFSPEC*SEWTFSDILRL
Trigger: CAAGCGCAGTATGTCGCTGAAGGTCCACTCGCTGCAGCACTCGGGGGAGAAACCTTTCCGCTGTGAGAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS GCA 72 bp TTGCAGTTCTCACAGCGGAAAGGTTTCTCCCCCGAGTaGTGCAGCGAGTGGACCTTCAGCGACATACTGCGC +
Preference number: 6 (lower is better)
Translates to: LQFSQRKGFSPE*CSEWTFSDILR
Trigger: GCGCAGTATGTCGCTGAAGGTCCACTCGCTGCAGCACTCGGGGGAGAAACCTTTCCGCTGTGAGAACTGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093772.4
CDS CCA 72 bp GCCCATCTTCTTCATCCTCATCCTCTCGATGATCGCTaGGCCCTTCCTCCTCTTCCTCCTCCTCCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: AHLLHPHPLDDR*ALPPLPPPPLP
Trigger: AGGGAGAGGAGGAGGAGGAAGAGGAGGAAGGGCCCAGCGATCATCGAGAGGATGAGGATGAAGAAGATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CAA 72 bp AGTGCCTCCAGAGATAGCTCGACCCGCTGCAGCTGCTaGTTCTGTGTGAAGAGCGAGTGGAAGAACTGGCTG +
Preference number: 6 (lower is better)
Translates to: SASRDSSTRCSC*FCVKSEWKNWL
Trigger: CAGCCAGTTCTTCCACTCGCTCTTCACACAGAACAAGCAGCTGCAGCGGGTCGAGCTATCTCTGGAGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS GCA 72 bp CCAGAGCCTGGCTTGCCCTCGGGTCCGGTGGACACATaGAGTGTTTGGTTGTTAAGGTTCACCTCAACAATG +
Preference number: 6 (lower is better)
Translates to: PEPGLPSGPVDT*SVWLLRFTSTM
Trigger: CATTGTTGAGGTGAACCTTAACAACCAAACACTGCATGTGTCCACCGGACCCGAGGGCAAGCCAGGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CAA 90 bp GAGCCTGGCTTGCCCTCGGGTCCGGTGGACACATGCAGTGTTTGGTaGTTAAGGTTCACCTCAACAATGATTTGTGACTGCTCCTGGTGC +
Preference number: 6 (lower is better)
Translates to: EPGLPSGPVDTCSVW*LRFTSTMICDCSWC
Trigger: GCACCAGGAGCAGTCACAAATCATTGTTGAGGTGAACCTTAACAACCAAACACTGCATGTGTCCACCGGACCCGAGGGCAAGCCAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CAA 90 bp GACCACAGTTTCTTGAAGGCTTTGCCACATGTCATGCACTGGATGTaGCGCTCACAGTCCGTCTGTCTGTGCAGCTGCAGCTCACTCTCC +
Preference number: 6 (lower is better)
Translates to: DHSFLKALPHVMHWM*RSQSVCLCSCSSLS
Trigger: GGAGAGTGAGCTGCAGCTGCACAGACAGACGGACTGTGAGCGCAACATCCAGTGCATGACATGTGGCAAAGCCTTCAAGAAACTGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CCA 72 bp CCCTCTCCTCCTCAGAACTCTCTGCATCCTGCTCACTaGGCCCATCTTCTTCATCCTCATCCTCTCGATGAT +
Preference number: 6 (lower is better)
Translates to: PSPPQNSLHPAH*AHLLHPHPLDD
Trigger: ATCATCGAGAGGATGAGGATGAAGAAGATGGGCCCAGTGAGCAGGATGCAGAGAGTTCTGAGGAGGAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CCA 72 bp GGCTTGCCCTCGGGTCCGGTGGACACATGCAGTGTTTaGTTGTTAAGGTTCACCTCAACAATGATTTGTGAC +
Preference number: 6 (lower is better)
Translates to: GLPSGPVDTCSV*LLRFTSTMICD
Trigger: GTCACAAATCATTGTTGAGGTGAACCTTAACAACCAAACACTGCATGTGTCCACCGGACCCGAGGGCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS TCA 72 bp TGTTTGGTTGTTAAGGTTCACCTCAACAATGATTTGTaGCTGCTCCTGGTGCCCATAGGTGCCCGAGGCATC +
Preference number: 6 (lower is better)
Translates to: CLVVKVHLNNDL*LLLVPIGARGI
Trigger: GATGCCTCGGGCACCTATGGGCACCAGGAGCAGTCACAAATCATTGTTGAGGTGAACCTTAACAACCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS CAA 72 bp TTGCCCTCGGGTCCGGTGGACACATGCAGTGTTTGGTaGTTAAGGTTCACCTCAACAATGATTTGTGACTGC +
Preference number: 6 (lower is better)
Translates to: LPSGPVDTCSVW*LRFTSTMICDC
Trigger: GCAGTCACAAATCATTGTTGAGGTGAACCTTAACAACCAAACACTGCATGTGTCCACCGGACCCGAGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2
CDS TCA 72 bp CTATCTTGTTGTGCTCATGAAGAGACCACAGTTTCTTaGAGGCTTTGCCACATGTCATGCACTGGATGTTGC +
Preference number: 6 (lower is better)
Translates to: LSCCAHEETTVS*RLCHMSCTGCC
Trigger: GCAACATCCAGTGCATGACATGTGGCAAAGCCTTCAAGAAACTGTGGTCTCTTCATGAGCACAACAAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093772.4
ENSMUST00000214732.2