Pregenerated sensors for ZFP65 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071281Ensembl transcript IDs: ENSMUST00000073157.15, ENSMUST00000127979.9, ENSMUST00000130891.3, ENSMUST00000223829.2
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGTGTCAGCGTTTGGTGGCTGATTATAGGATGGATCCCTGGGTATaGCAGTCTCTAGATGGTCCATCCTTTCATCTCAGCTCCAAACTT | + |
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Preference number: 1 (lower is better) Translates to: WCQRLVADYRMDPWV*QSLDGPSFHLSSKL Trigger: AAGTTTGGAGCTGAGATGAAAGGATGGACCATCTAGAGACTGCCATACCCAGGGATCCATCCTATAATCAGCCACCAAACGCTGACACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR CCA 90 bp | ATGAAATGGTGTCAGCGTTTGGTGGCTGATTATAGGATGGATCCCTaGGTATGGCAGTCTCTAGATGGTCCATCCTTTCATCTCAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: MKWCQRLVADYRMDP*VWQSLDGPSFHLSS Trigger: GGAGCTGAGATGAAAGGATGGACCATCTAGAGACTGCCATACCCAGGGATCCATCCTATAATCAGCCACCAAACGCTGACACCATTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR GCA 90 bp | CTTCATTTACATTTCCAATACTATCCCAAAAGTCCCCTATACCATTaGTCCCAATCCTCTACCCACCCACTCCCACTTCTTAGCCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: LHLHFQYYPKSPLYH*SQSSTHPLPLLSPG Trigger: GCCAGGGCTAAGAAGTGGGAGTGGGTGGGTAGAGGATTGGGAGCAATGGTATAGGGGACTTTTGGGATAGTATTGGAAATGTAAATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR GCA 90 bp | TGGAGCATGTGTCTTTCTTACCAGTTGGAACATCTTCTGGATAGATaGCCAGGAGAGGTATTGGACAACCCTCTGGTAGTACTATGTCCA | + |
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Preference number: 1 (lower is better) Translates to: WSMCLSYQLEHLLDR*PGEVLDNPLVVLCP Trigger: TGGACATAGTACTACCAGAGGGTTGTCCAATACCTCTCCTGGGCATCTATCCAGAAGATGTTCCAACTGGTAAGAAAGACACATGCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR TCA 90 bp | CTGAAGCATATAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCAATaGTGGTCGACTAGGCCATCTCCTGATACATATGCAGGTAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: LKHIKFARPMGLSFQ*WSTRPSPDTYAGKD Trigger: GTCTTTACCTGCATATGTATCAGGAGATGGCCTAGTCGACCATCATTGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTATATGCTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR TCA 90 bp | GGAGAGGTATTGGACAACCCTCTGGTAGTACTATGTCCAATTTTCTaGGGAACTGCCAGACTGATTTCCATATTTTTGTATCTGTTGAGG | + |
|
Preference number: 1 (lower is better) Translates to: GEVLDNPLVVLCPIF*GTARLISIFLYLLR Trigger: CCTCAACAGATACAAAAATATGGAAATCAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACCAGAGGGTTGTCCAATACCTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR TCA 90 bp | GAGACAGCTATATCTGGATCCTTTCAGCAAAATCTTTCTAGTGTATaGAATGGTGTCAGCGTTTGGTGGCTGATTATAGGATGGATCCCT | + |
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Preference number: 1 (lower is better) Translates to: ETAISGSFQQNLSSV*NGVSVWWLIIGWIP Trigger: AGGGATCCATCCTATAATCAGCCACCAAACGCTGACACCATTTCATACACTAGAAAGATTTTGCTGAAAGGATCCAGATATAGCTGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR TCA 90 bp | ACCCAGGAAAGATCAGCCCTAAATGCGGAGAACAAACACATAATCTaGCAGCTCTACTTTTGGCATGATTGTGTGAATGATTCCAAAGTC | + |
|
Preference number: 1 (lower is better) Translates to: TQERSALNAENKHII*QLYFWHDCVNDSKV Trigger: GACTTTGGAATCATTCACACAATCATGCCAAAAGTAGAGCTGTCAGATTATGTGTTTGTTCTCCGCATTTAGGGCTGATCTTTCCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR TCA 90 bp | ACATATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGGATaGTGCCCTCCAGGTCCATCCATTTGCCTAGAAATTTCAAAAATT | + |
|
Preference number: 1 (lower is better) Translates to: TYHVSSFVIGLPHSG*CPPGPSICLEISKI Trigger: AATTTTTGAAATTTCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR GCA 90 bp | ATTGGACAACCCTCTGGTAGTACTATGTCCAATTTTCTGAGGAACTaGCAGACTGATTTCCATATTTTTGTATCTGTTGAGGCCTATTTT | + |
|
Preference number: 1 (lower is better) Translates to: IGQPSGSTMSNFLRN*QTDFHIFVSVEAYF Trigger: AAAATAGGCCTCAACAGATACAAAAATATGGAAATCAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACCAGAGGGTTGTCCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR GCA 90 bp | CTCTACTTTTGGCATGATTGTGTGAATGATTCCAAAGTCTTTACTTaGCCCATTCCTCAATCTTATATGGTTTTTATTCAGGAAGGAGCT | + |
|
Preference number: 1 (lower is better) Translates to: LYFWHDCVNDSKVFT*PIPQSYMVFIQEGA Trigger: AGCTCCTTCCTGAATAAAAACCATATAAGATTGAGGAATGGGGCAAGTAAAGACTTTGGAATCATTCACACAATCATGCCAAAAGTAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR GCA 90 bp | CACTTATCAGTGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACGACCTTGGGGGTGCCTaGGGACTTCGAGCCCAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: HLSVSTYHVSSFVIGLPHDLGGA*GLRAQG Trigger: ACCTTGGGCTCGAAGTCCGCAGGCACCCCCAAGGTC...GTGAGGTAACCCAATCACAAAAGAACTCACATGATATGTACTCACTGATAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR TCA 90 bp | ATCCCAAAAGTCCCCTATACCATTGCTCCCAATCCTCTACCCACCCACTCCCACGCTCTTTGTTCTTCTTaGGTTTCATGTGTTTTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: IPKVPYTIAPNPLPTHSHALCSS*VSCVLQ Trigger: TTGCAAAACACATGAAACTCAAGAAGAACAAAGAGC...GTGGGAGTGGGTGGGTAGAGGATTGGGAGCAATGGTATAGGGGACTTTTGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR GCA 90 bp | ATCCCAAAAGTCCCCTATACCATTGCTCCCAATCCTCTACCCACCCACTCCCACAAAGTCTCCACACTTTaGTCTTTGTTCTTCTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: IPKVPYTIAPNPLPTHSHKVSTL*SLFFLS Trigger: ACTCAAGAAGAACAAAGAGCAAAGTGTGGAGACTTT...GTGGGAGTGGGTGGGTAGAGGATTGGGAGCAATGGTATAGGGGACTTTTGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR GCA 90 bp | CAACCCTCTGGTAGTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCGAGCCAGCATGTAGTTaGCAGGAATTGAACTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: QPSGSTMSNFLRNCQTDFEPACS*QELNSG Trigger: TCCTGAGTTCAATTCCTGGCAACTACATGCTGGCTC...GAAATCAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACCAGAGGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTATGGCAGTCTCTAGATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGGAGGAACTGCCAGACTaGTTTCCATATTTTTGTATC | + |
|
Preference number: 2 (lower is better) Translates to: LGMAVSRWSILSSQLQTLEELPD*FPYFCI Trigger: GATACAAAAATATGGAAATCAGTCTGGCAGTTCCTC...CAAAGTTTGGAGCTGAGATGAAAGGATGGACCATCTAGAGACTGCCATACCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTGATTGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGTTATATGGTCAATTTTaGAGAAGGTACCATGAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: FCDWVTSLRMMPSRSIHLLYGQF*RRYHEV Trigger: CACCTCATGGTACCTTCTCCAAAATTGACCATATAA...CAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR GCA 90 bp | CTGGGTATGGCAGTCTCTAGATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGCCAGGTCCATCCATTTaGCTAGAAATTTCAAAAATT | + |
|
Preference number: 2 (lower is better) Translates to: LGMAVSRWSILSSQLQTLPGPSI*LEISKI Trigger: AATTTTTGAAATTTCTAGGCAAATGGATGGACCTGG...CAAAGTTTGGAGCTGAGATGAAAGGATGGACCATCTAGAGACTGCCATACCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTGATTGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGTACATACTTCCTAATTaGAGGGTTTCTTTCCCATAT | + |
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Preference number: 2 (lower is better) Translates to: FCDWVTSLRMMPSRSIHLYILPN*RVSFPY Trigger: ATATGGGAAAGAAACCCTCCAATTAGGAAGTATGTA...CAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR TCA 90 bp | ATCAGCCCTAAATGCGGAGAACAAACACATAATCTGACAGCTCTACTTTTGGCAGGTTTCTTTCCCATATaGTTTCTCTTGGGGTTAGAA | + |
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Preference number: 2 (lower is better) Translates to: ISPKCGEQTHNLTALLLAGFFPI*FLLGLE Trigger: TTCTAACCCCAAGAGAAATCATATGGGAAAGAAACC...TGCCAAAAGTAGAGCTGTCAGATTATGTGTTTGTTCTCCGCATTTAGGGCTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR CCA 90 bp | TCCAAAGTCTTTACTTGCCCCATTCCTCAATCTTATATGGTTTTTATTCAGGAAATGGATCCCTGGGTATaGCAGTCTCTAGATGGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: SKVFTCPIPQSYMVFIQEMDPWV*QSLDGP Trigger: TGGACCATCTAGAGACTGCCATACCCAGGGATCCAT...TTCCTGAATAAAAACCATATAAGATTGAGGAATGGGGCAAGTAAAGACTTTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR CCA 90 bp | ACTCAAGGCAATCTCTTATGTGTGAGCTCTTACAACATAAGAACAAGACACTATTGGCTGATTATAGGATaGATCCCTGGGTATGGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: TQGNLLCVSSYNIRTRHYWLIIG*IPGYGS Trigger: ACTGCCATACCCAGGGATCCATCCTATAATCAGCCA...ATAGTGTCTTGTTCTTATGTTGTAAGAGCTCACACATAAGAGATTGCCTTGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR TCA 90 bp | TCCAAAGTCTTTACTTGCCCCATTCCTCAATCTTATATGGTTTTTATTCAGGAATTGGAGAAGGTACCATaGGGTGATGAGAAGAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: SKVFTCPIPQSYMVFIQELEKVP*GDEKKV Trigger: TACCTTCTTCTCATCACCTCATGGTACCTTCTCCAA...TTCCTGAATAAAAACCATATAAGATTGAGGAATGGGGCAAGTAAAGACTTTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR CCA 90 bp | ACTCAAGGCAATCTCTTATGTGTGAGCTCTTACAACATAAGAACAAGACACTATAGTTTGCAAGACCAATaGGCCTCTCTTTCCAATGAT | + |
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Preference number: 2 (lower is better) Translates to: TQGNLLCVSSYNIRTRHYSLQDQ*ASLSND Trigger: ATCATTGGAAAGAGAGGCCCATTGGTCTTGCAAACT...ATAGTGTCTTGTTCTTATGTTGTAAGAGCTCACACATAAGAGATTGCCTTGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR TCA 90 bp | ACTCAAGGCAATCTCTTATGTGTGAGCTCTTACAACATAAGAACAAGACACTATAATCTTTCTAGTGTATaGAATGGTGTCAGCGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: TQGNLLCVSSYNIRTRHYNLSSV*NGVSVW Trigger: CCAAACGCTGACACCATTTCATACACTAGAAAGATT...ATAGTGTCTTGTTCTTATGTTGTAAGAGCTCACACATAAGAGATTGCCTTGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR GCA 90 bp | TCCAAAGTCTTTACTTGCCCCATTCCTCAATCTTATATGGTTTTTATTCAGGAATATGAGTTCTCTACCTaGATGTATCCCTACATACCA | + |
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Preference number: 2 (lower is better) Translates to: SKVFTCPIPQSYMVFIQEYEFST*MYPYIP Trigger: TGGTATGTAGGGATACATGCAGGTAGAGAACTCATA...TTCCTGAATAAAAACCATATAAGATTGAGGAATGGGGCAAGTAAAGACTTTGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR GCA 90 bp | CACTTATCAGTGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACAATTTTCTGAGGAACTaGCAGACTGATTTCCATATT | + |
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Preference number: 2 (lower is better) Translates to: HLSVSTYHVSSFVIGLPHNFLRN*QTDFHI Trigger: AATATGGAAATCAGTCTGGCAGTTCCTCAGAAAATT...GTGAGGTAACCCAATCACAAAAGAACTCACATGATATGTACTCACTGATAAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR GCA 90 bp | ACTCAAGGCAATCTCTTATGTGTGAGCTCTTACAACATAAGAACAAGACACTATAAGATCAGCCCTAAATaGGGAGAACAAACACATAAT | + |
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Preference number: 2 (lower is better) Translates to: TQGNLLCVSSYNIRTRHYKISPK*GEQTHN Trigger: ATTATGTGTTTGTTCTCCGCATTTAGGGCTGATCTT...ATAGTGTCTTGTTCTTATGTTGTAAGAGCTCACACATAAGAGATTGCCTTGAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR CCA 72 bp | TGTCAGCGTTTGGTGGCTGATTATAGGATGGATCCCTaGGTATGGCAGTCTCTAGATGGTCCATCCTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: CQRLVADYRMDP*VWQSLDGPSFH Trigger: ATGAAAGGATGGACCATCTAGAGACTGCCATACCCAGGGATCCATCCTATAATCAGCCACCAAACGCTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR CAA 90 bp | TTTTGTGATTGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGTGTAGTTGCCAGGAATaGAACTCAGGACAGCACAAT | + |
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Preference number: 3 (lower is better) Translates to: FCDWVTSLRMMPSRSIHLCSCQE*NSGQHN Trigger: ATTGTGCTGTCCTGAGTTCAATTCCTGGCAACTACA...CAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR CAA 90 bp | ATCAGCCCTAAATGCGGAGAACAAACACATAATCTGACAGCTCTACTTTTGGCAGACCTCTTTAGCTCCTaGGGTACTTTCTCTAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: ISPKCGEQTHNLTALLLADLFSS*GTFSSS Trigger: GGAGCTAGAGAAAGTACCCAAGGAGCTAAAGAGGTC...TGCCAAAAGTAGAGCTGTCAGATTATGTGTTTGTTCTCCGCATTTAGGGCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR TCA 72 bp | GTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGGATaGTGCCCTCCAGGTCCATCCATTTGCCTAGAAATT | + |
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Preference number: 3 (lower is better) Translates to: VSSFVIGLPHSG*CPPGPSICLEI Trigger: AATTTCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR TCA 72 bp | ATAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCAATaGTGGTCGACTAGGCCATCTCCTGATACATATGCA | + |
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Preference number: 3 (lower is better) Translates to: IKFARPMGLSFQ*WSTRPSPDTYA Trigger: TGCATATGTATCAGGAGATGGCCTAGTCGACCATCATTGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR CCA 72 bp | TATGAACATAGTGGAGCATGTGTCTTTCTTACCAGTTaGAACATCTTCTGGATAGATGCCCAGGAGAGGTAT | + |
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Preference number: 3 (lower is better) Translates to: YEHSGACVFLTS*NIFWIDAQERY Trigger: ATACCTCTCCTGGGCATCTATCCAGAAGATGTTCCAACTGGTAAGAAAGACACATGCTCCACTATGTTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR GCA 72 bp | AGAAACAAAAGACACCCAGGAAAGATCAGCCCTAAATaGGGAGAACAAACACATAATCTGACAGCTCTACTT | + |
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Preference number: 3 (lower is better) Translates to: RNKRHPGKISPK*GEQTHNLTALL Trigger: AAGTAGAGCTGTCAGATTATGTGTTTGTTCTCCGCATTTAGGGCTGATCTTTCCTGGGTGTCTTTTGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR TCA 72 bp | AGATCAGCCCTAAATGCGGAGAACAAACACATAATCTaGCAGCTCTACTTTTGGCATGATTGTGTGAATGAT | + |
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Preference number: 3 (lower is better) Translates to: RSALNAENKHII*QLYFWHDCVND Trigger: ATCATTCACACAATCATGCCAAAAGTAGAGCTGTCAGATTATGTGTTTGTTCTCCGCATTTAGGGCTGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR GCA 72 bp | CCCTCTGGTAGTACTATGTCCAATTTTCTGAGGAACTaGCAGACTGATTTCCATATTTTTGTATCTGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: PSGSTMSNFLRN*QTDFHIFVSVE Trigger: CTCAACAGATACAAAAATATGGAAATCAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACCAGAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR TCA 72 bp | TTGGACAACCCTCTGGTAGTACTATGTCCAATTTTCTaGGGAACTGCCAGACTGATTTCCATATTTTTGTAT | + |
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Preference number: 3 (lower is better) Translates to: LDNPLVVLCPIF*GTARLISIFLY Trigger: ATACAAAAATATGGAAATCAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACCAGAGGGTTGTCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR TCA 72 bp | ATATCTGGATCCTTTCAGCAAAATCTTTCTAGTGTATaGAATGGTGTCAGCGTTTGGTGGCTGATTATAGGA | + |
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Preference number: 3 (lower is better) Translates to: ISGSFQQNLSSV*NGVSVWWLIIG Trigger: TCCTATAATCAGCCACCAAACGCTGACACCATTTCATACACTAGAAAGATTTTGCTGAAAGGATCCAGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR CAA 90 bp | ACTCAAGGCAATCTCTTATGTGTGAGCTCTTACAACATAAGAACAAGACACTATTCCACACTTTGCTCTTaGTTCTTCTTGAGTTTCATG | + |
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Preference number: 3 (lower is better) Translates to: TQGNLLCVSSYNIRTRHYSTLCS*FFLSFM Trigger: CATGAAACTCAAGAAGAACAAAGAGCAAAGTGTGGA...ATAGTGTCTTGTTCTTATGTTGTAAGAGCTCACACATAAGAGATTGCCTTGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR CAA 90 bp | TCCAAAGTCTTTACTTGCCCCATTCCTCAATCTTATATGGTTTTTATTCAGGAACAAAGTCTCCACACTTaGCTCTTTGTTCTTCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: SKVFTCPIPQSYMVFIQEQSLHT*LFVLLE Trigger: CTCAAGAAGAACAAAGAGCAAAGTGTGGAGACTTTG...TTCCTGAATAAAAACCATATAAGATTGAGGAATGGGGCAAGTAAAGACTTTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR CAA 90 bp | TCCAAAGTCTTTACTTGCCCCATTCCTCAATCTTATATGGTTTTTATTCAGGAATCTAAAGGAGTTGACTaGCACTTAATAAATGTAGGG | + |
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Preference number: 3 (lower is better) Translates to: SKVFTCPIPQSYMVFIQESKGVD*HLINVG Trigger: CCCTACATTTATTAAGTGCAAGTCAACTCCTTTAGA...TTCCTGAATAAAAACCATATAAGATTGAGGAATGGGGCAAGTAAAGACTTTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR-3UTR CAA 90 bp | TCCAAAGTCTTTACTTGCCCCATTCCTCAATCTTATATGGTTTTTATTCAGGAACTTTCCATGGGTGTTTaGTTCCCAATTTTAAGAATG | + |
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Preference number: 3 (lower is better) Translates to: SKVFTCPIPQSYMVFIQELSMGV*FPILRM Trigger: CATTCTTAAAATTGGGAACAAAACACCCATGGAAAG...TTCCTGAATAAAAACCATATAAGATTGAGGAATGGGGCAAGTAAAGACTTTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR GCA 72 bp | TGGCATGATTGTGTGAATGATTCCAAAGTCTTTACTTaGCCCATTCCTCAATCTTATATGGTTTTTATTCAG | + |
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Preference number: 3 (lower is better) Translates to: WHDCVNDSKVFT*PIPQSYMVFIQ Trigger: CTGAATAAAAACCATATAAGATTGAGGAATGGGGCAAGTAAAGACTTTGGAATCATTCACACAATCATGCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR CAA 72 bp | TGTTCCACCTATAGGGGTGCAGACCTCTTTAGCTCCTaGGGTACTTTCTCTAGCTCCACCATTGGGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: CSTYRGADLFSS*GTFSSSTIGNP Trigger: AGGGTTCCCAATGGTGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGAGGTCTGCACCCCTATAGGTGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR TCA 90 bp | CTGGGTATGGCAGTCTCTAGATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGCAATGGCCACATCCCTaGATGACAGCATTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LGMAVSRWSILSSQLQTLQWPHP*MTAFPP Trigger: TGGAGGAAATGCTGTCATTCAGGGATGTGGCCATTG...CAAAGTTTGGAGCTGAGATGAAAGGATGGACCATCTAGAGACTGCCATACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR CCA 90 bp | CTGGGTATGGCAGTCTCTAGATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGATAGCATTTTCCTCCTaGGAGCATAAATGGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LGMAVSRWSILSSQLQTLIAFSS*EHKWSS Trigger: GGAGCTCCATTTATGCTCCCAGGAGGAAAATGCTAT...CAAAGTTTGGAGCTGAGATGAAAGGATGGACCATCTAGAGACTGCCATACCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR CAA 72 bp | ACATTTCCAATACTATCCCAAAAGTCCCCTATACCATaGCTCCCAATCCTCTACCCACCCACTCCCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: TFPILSQKSPIP*LPILYPPTPTS Trigger: AGAAGTGGGAGTGGGTGGGTAGAGGATTGGGAGCAATGGTATAGGGGACTTTTGGGATAGTATTGGAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR GCA 90 bp | TTTTGTGATTGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGAAAGAAATGATGAATTaGGGAAGGCCTTGCCACATT | + |
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Preference number: 4 (lower is better) Translates to: FCDWVTSLRMMPSRSIHLKEMMN*GRPCHI Trigger: AATGTGGCAAGGCCTTCCGCAATTCATCATTTCTTT...CAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR TCA 90 bp | ACTCAAGGCAATCTCTTATGTGTGAGCTCTTACAACATAAGAACAAGACACTATCTGTACAAATTCCACTaGGCAGGACCTAGGCATTCC | + |
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Preference number: 4 (lower is better) Translates to: TQGNLLCVSSYNIRTRHYLYKFH*AGPRHS Trigger: GGAATGCCTAGGTCCTGCTCAGTGGAATTTGTACAG...ATAGTGTCTTGTTCTTATGTTGTAAGAGCTCACACATAAGAGATTGCCTTGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR TCA 90 bp | CAACCCTCTGGTAGTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCTCCTCTTTTCACACCTaGAGTCTCTTGTATTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QPSGSTMSNFLRNCQTDFSSFHT*SLLYFL Trigger: GAGAAAATACAAGAGACTTCAGGTGTGAAAAGAGGA...GAAATCAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACCAGAGGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR TCA 90 bp | CACTTATCAGTGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACCTTGTGTTTAGAAAGTaGGGACAGATAGCAGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: HLSVSTYHVSSFVIGLPHLVFRK*GQIAEG Trigger: CCCTTCTGCTATCTGTCCTCACTTTCTAAACACAAG...GTGAGGTAACCCAATCACAAAAGAACTCACATGATATGTACTCACTGATAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR TCA 90 bp | CACTTATCAGTGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACGGTTTCCCTCCTGTATaGATTCTGCTCTCTTTAGAA | + |
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Preference number: 4 (lower is better) Translates to: HLSVSTYHVSSFVIGLPHGFPPV*ILLSLE Trigger: TTCTAAAGAGAGCAGAATTCATACAGGAGGGAAACC...GTGAGGTAACCCAATCACAAAAGAACTCACATGATATGTACTCACTGATAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR GCA 90 bp | CATTGGAAGTCCTTGCCACATTATTCCATTAGTAGCGTTGGTTGTTCTCTGGTAAAAGTAATAATGGAATaGAGAAGGCCTTGCCACAAA | + |
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Preference number: 4 (lower is better) Translates to: HWKSLPHYSISSVGCSLVKVIME*RRPCHK Trigger: TTTGTGGCAAGGCCTTCTGCATTCCATTATTACTTT...TACCAGAGAACAACCAACGCTACTAATGGAATAATGTGGCAAGGACTTCCAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR GCA 90 bp | ACTCAAGGCAATCTCTTATGTGTGAGCTCTTACAACATAAGAACAAGACACTATTTTTGCCACACTCTGTaGACGTATAGCATTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: TQGNLLCVSSYNIRTRHYFCHTL*TYSIFL Trigger: GAGGAAAATGCTATACGTGCACAGAGTGTGGCAAAA...ATAGTGTCTTGTTCTTATGTTGTAAGAGCTCACACATAAGAGATTGCCTTGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| 3UTR CAA 72 bp | GTTCCCAATTTTAAGAATGGGCAAAGTCTCCACACTTaGCTCTTTGTTCTTCTTGAGTTTCATGTGTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: VPNFKNGQSLHT*LFVLLEFHVFC Trigger: GCAAAACACATGAAACTCAAGAAGAACAAAGAGCAAAGTGTGGAGACTTTGCCCATTCTTAAAATTGGGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR TCA 90 bp | ACTCAAGGCAATCTCTTATGTGTGAGCTCTTACAACATAAGAACAAGACACTATATGGTTGTAAAGTCTTaGTGGATAATGGAAGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TQGNLLCVSSYNIRTRHYMVVKS*WIMEVL Trigger: AAGGACTTCCATTATCCATCAAGACTTTACAACCAT...ATAGTGTCTTGTTCTTATGTTGTAAGAGCTCACACATAAGAGATTGCCTTGAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR CCA 90 bp | TCCAAAGTCTTTACTTGCCCCATTCCTCAATCTTATATGGTTTTTATTCAGGAAAGTTTTGATGGATATTaGAAGGCCTTGCCACATATA | + |
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Preference number: 4 (lower is better) Translates to: SKVFTCPIPQSYMVFIQESFDGY*KALPHI Trigger: TATATGTGGCAAGGCCTTCCAATATCCATCAAAACT...TTCCTGAATAAAAACCATATAAGATTGAGGAATGGGGCAAGTAAAGACTTTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR CAA 90 bp | ATTGTGTCCCTAGGGACCTTGGGGGTGCCTGCGGACTTCGAGCCCAAGGTGACCGGACTATGGAAAGACTaGGCACATTCTTCACACTTG | + |
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Preference number: 5 (lower is better) Translates to: IVSLGTLGVPADFEPKVTGLWKD*AHSSHL Trigger: CAAGTGTGAAGAATGTGCCAAGTCTTTCCATAGTCC...GGTCACCTTGGGCTCGAAGTCCGCAGGCACCCCCAAGGTCCCTAGGGACACAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR CAA 90 bp | CAACCCTCTGGTAGTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCGGATATTGGAAGGCCTaGCCACATATATCACACTTG | + |
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Preference number: 5 (lower is better) Translates to: QPSGSTMSNFLRNCQTDFGYWKA*PHISHL Trigger: CAAGTGTGATATATGTGGCAAGGCCTTCCAATATCC...GAAATCAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACCAGAGGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR CAA 90 bp | CATTGGAAGTCCTTGCCACATTATTCCATTAGTAGCGTTGGTTGTTCTCTGGTAGAAAGAAATGATGAATaGCGGAAGGCCTTGCCACAT | + |
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Preference number: 5 (lower is better) Translates to: HWKSLPHYSISSVGCSLVERNDE*RKALPH Trigger: ATGTGGCAAGGCCTTCCGCAATTCATCATTTCTTTC...TACCAGAGAACAACCAACGCTACTAATGGAATAATGTGGCAAGGACTTCCAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR CAA 90 bp | ATCAGCCCTAAATGCGGAGAACAAACACATAATCTGACAGCTCTACTTTTGGCATATGGTTGTAAAGTCTaGATGGATAATGGAAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: ISPKCGEQTHNLTALLLAYGCKV*MDNGSP Trigger: AGGACTTCCATTATCCATCAAGACTTTACAACCATA...TGCCAAAAGTAGAGCTGTCAGATTATGTGTTTGTTCTCCGCATTTAGGGCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS-3UTR CAA 90 bp | CACTTATCAGTGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTATGTCTGGAAAGTTTaGATGGATATTGGAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: HLSVSTYHVSSFVIGLPHYVWKV*MDIGRP Trigger: AGGCCTTCCAATATCCATCAAAACTTTCCAGACATA...GTGAGGTAACCCAATCACAAAAGAACTCACATGATATGTACTCACTGATAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073157.15 |
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| CDS CCA 72 bp | TTTGCCACACTCTGTGCACGTATAGCATTTTCCTCCTaGGAGCATAAATGGAGCTCCTCCTCTTTTCACACC | + |
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Preference number: 6 (lower is better) Translates to: FATLCARIAFSS*EHKWSSSSFHT Trigger: GGTGTGAAAAGAGGAGGAGCTCCATTTATGCTCCCAGGAGGAAAATGCTATACGTGCACAGAGTGTGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073157.15 ENSMUST00000127979.9 ENSMUST00000130891.3 ENSMUST00000223829.2 |
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| CDS TCA 72 bp | TGGGAGCATAAATGGAGCTCCTCCTCTTTTCACACCTaGAGTCTCTTGTATTTTCTCCAGACATGTGACCAG | + |
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Preference number: 6 (lower is better) Translates to: WEHKWSSSSFHT*SLLYFLQTCDQ Trigger: CTGGTCACATGTCTGGAGAAAATACAAGAGACTTCAGGTGTGAAAAGAGGAGGAGCTCCATTTATGCTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073157.15 ENSMUST00000127979.9 ENSMUST00000130891.3 ENSMUST00000223829.2 |
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