Pregenerated sensors for ZFP648 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066797Ensembl transcript IDs: ENSMUST00000086195.7
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CACAGAGGAAGTCCTTGTCCCCTGAATGGATCTGCTGGTGTCGCTTaGGGGTGGAGGAACGGGCGAAGGCCTGGCCGCATTCAGCACAAG | + |
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Preference number: 5 (lower is better) Translates to: HRGSPCPLNGSAGVA*GWRNGRRPGRIQHK Trigger: CTTGTGCTGAATGCGGCCAGGCCTTCGCCCGTTCCTCCACCCTCAAGCGACACCAGCAGATCCATTCAGGGGACAAGGACTTCCTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS GCA 90 bp | GCATGCGGATGTGCTGCGCCAACTCGGACGCGATGCGGAAAGCCCTaGCACACTCTGCACAGAGGAAGTCCTTGTCCCCTGAATGGATCT | + |
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Preference number: 5 (lower is better) Translates to: ACGCAAPTRTRCGKP*HTLHRGSPCPLNGS Trigger: AGATCCATTCAGGGGACAAGGACTTCCTCTGTGCAGAGTGTGGCAGGGCTTTCCGCATCGCGTCCGAGTTGGCGCAGCACATCCGCATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CCA 90 bp | AGACCCTCCTCTTCCTGCCCGCTGCCTTCTGGGCCCGCCTGGCCCTaGACTTTTCTACTGCTCCGTACTTTTACTAACAGGCTGGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: RPSSSCPLPSGPAWP*TFLLLRTFTNRLAG Trigger: TCCTGCCAGCCTGTTAGTAAAAGTACGGAGCAGTAGAAAAGTCCAGGGCCAGGCGGGCCCAGAAGGCAGCGGGCAGGAAGAGGAGGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS GCA 90 bp | CCTGCCCGCTGCCTTCTGGGCCCGCCTGGCCCTGGACTTTTCTACTaGTCCGTACTTTTACTAACAGGCTGGCAGGAATGGTTGGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: PARCLLGPPGPGLFY*SVLLLTGWQEWLES Trigger: AGACTCCAACCATTCCTGCCAGCCTGTTAGTAAAAGTACGGAGCAGTAGAAAAGTCCAGGGCCAGGCGGGCCCAGAAGGCAGCGGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CCA 90 bp | CTATCGAGACCCTCCTCTTCCTGCCCGCTGCCTTCTGGGCCCGCCTaGCCCTGGACTTTTCTACTGCTCCGTACTTTTACTAACAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LSRPSSSCPLPSGPA*PWTFLLLRTFTNRL Trigger: CAGCCTGTTAGTAAAAGTACGGAGCAGTAGAAAAGTCCAGGGCCAGGCGGGCCCAGAAGGCAGCGGGCAGGAAGAGGAGGGTCTCGATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS TCA 90 bp | TCTTCCCAGGCATCTCCCCAGGTTTCTGCGCCACACACCCAGCACTaGAGCACTCAGGCCAGTTCTCTTCCTCTTTGCAGGACTGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: SSQASPQVSAPHTQH*STQASSLPLCRTEC Trigger: ACACTCAGTCCTGCAAAGAGGAAGAGAACTGGCCTGAGTGCTTCAGTGCTGGGTGTGTGGCGCAGAAACCTGGGGAGATGCCTGGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS GCA 90 bp | CATCCTCTTCTTCACTCTCCAAGCTCATTCTCAGCATCTGAGTGCTaGCAAGGGGCACCTTGGTCCACCTATCCTGGGAGTCCACCTGTG | + |
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Preference number: 5 (lower is better) Translates to: HPLLHSPSSFSASEC*QGAPWSTYPGSPPV Trigger: CACAGGTGGACTCCCAGGATAGGTGGACCAAGGTGCCCCTTGGCAGCACTCAGATGCTGAGAATGAGCTTGGAGAGTGAAGAAGAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS TCA 90 bp | TTCCTACCATCCTCTTCTTCACTCTCCAAGCTCATTCTCAGCATCTaGGTGCTGCCAAGGGGCACCTTGGTCCACCTATCCTGGGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: FLPSSSSLSKLILSI*VLPRGTLVHLSWES Trigger: GGACTCCCAGGATAGGTGGACCAAGGTGCCCCTTGGCAGCACTCAGATGCTGAGAATGAGCTTGGAGAGTGAAGAAGAGGATGGTAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS GCA 90 bp | TACCATCCTCTTCTTCACTCTCCAAGCTCATTCTCAGCATCTGAGTaGTGCCAAGGGGCACCTTGGTCCACCTATCCTGGGAGTCCACCT | + |
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Preference number: 5 (lower is better) Translates to: YHPLLHSPSSFSASE*CQGAPWSTYPGSPP Trigger: AGGTGGACTCCCAGGATAGGTGGACCAAGGTGCCCCTTGGCAGCACTCAGATGCTGAGAATGAGCTTGGAGAGTGAAGAAGAGGATGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CCA 90 bp | GCAGGACTGAGTGTCAAACTGCGAGTCGGTGTTGTTCTGAGTTCCTaGGGAGCCACCCTTCCTACCATCCTCTTCTTCACTCTCCAAGCT | + |
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Preference number: 5 (lower is better) Translates to: AGLSVKLRVGVVLSS*GATLPTILFFTLQA Trigger: AGCTTGGAGAGTGAAGAAGAGGATGGTAGGAAGGGTGGCTCCCCAGGAACTCAGAACAACACCGACTCGCAGTTTGACACTCAGTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CCA 90 bp | GGCTGGCAGGAATGGTTGGAGTCTGAACTAGTGTACTCTCAGACCTaGGAAAGTGCTCCAGAGAGTTCTTGTCTAGGGAAGATGCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: GWQEWLESELVYSQT*ESAPESSCLGKMPQ Trigger: TTGAGGCATCTTCCCTAGACAAGAACTCTCTGGAGCACTTTCCCAGGTCTGAGAGTACACTAGTTCAGACTCCAACCATTCCTGCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CCA 90 bp | CCTGGCCCTGGACTTTTCTACTGCTCCGTACTTTTACTAACAGGCTaGCAGGAATGGTTGGAGTCTGAACTAGTGTACTCTCAGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: PGPGLFYCSVLLLTG*QEWLESELVYSQTW Trigger: CCAGGTCTGAGAGTACACTAGTTCAGACTCCAACCATTCCTGCCAGCCTGTTAGTAAAAGTACGGAGCAGTAGAAAAGTCCAGGGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS TCA 90 bp | CTGCTCCGTACTTTTACTAACAGGCTGGCAGGAATGGTTGGAGTCTaGACTAGTGTACTCTCAGACCTGGGAAAGTGCTCCAGAGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LLRTFTNRLAGMVGV*TSVLSDLGKCSREF Trigger: GAACTCTCTGGAGCACTTTCCCAGGTCTGAGAGTACACTAGTTCAGACTCCAACCATTCCTGCCAGCCTGTTAGTAAAAGTACGGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS TCA 72 bp | AGGGCTGCGCGAAGGTTACACCGCAGTCGGTGCATTTaGAGGGCCTCTGGCCGGTGTGCAGCGTCTGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: RAARRLHRSRCI*RASGRCAASGA Trigger: AGCACCAGACGCTGCACACCGGCCAGAGGCCCTTCAAATGCACCGACTGCGGTGTAACCTTCGCGCAGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS GCA 72 bp | CCGTTGCTGGTCTTCCCAGGCATCTCCCCAGGTTTCTaGGCCACACACCCAGCACTGAAGCACTCAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PLLVFPGISPGF*ATHPALKHSGQ Trigger: CTGGCCTGAGTGCTTCAGTGCTGGGTGTGTGGCGCAGAAACCTGGGGAGATGCCTGGGAAGACCAGCAACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS GCA 72 bp | TGTGCTGCGCCAACTCGGACGCGATGCGGAAAGCCCTaGCACACTCTGCACAGAGGAAGTCCTTGTCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: CAAPTRTRCGKP*HTLHRGSPCPL Trigger: CAGGGGACAAGGACTTCCTCTGTGCAGAGTGTGGCAGGGCTTTCCGCATCGCGTCCGAGTTGGCGCAGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS GCA 72 bp | TGTGCATGCGGATGTGCTGCGCCAACTCGGACGCGATaGGGAAAGCCCTGCCACACTCTGCACAGAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: CACGCAAPTRTR*GKPCHTLHRGS Trigger: ACTTCCTCTGTGCAGAGTGTGGCAGGGCTTTCCGCATCGCGTCCGAGTTGGCGCAGCACATCCGCATGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS GCA 72 bp | AGGGCTTGTCATTGCTGTGCATGTTGCGCTGGTGTTTaGGCAGATCGGAGGAGCGCACAAAAGCCCTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RACHCCACCAGV*ADRRSAQKPCR Trigger: GCGGCAGGGCTTTTGTGCGCTCCTCCGATCTGCGCAAACACCAGCGCAACATGCACAGCAATGACAAGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS GCA 72 bp | GGGCACACGGGAAGGGCTTGTCATTGCTGTGCATGTTaGGCTGGTGTTTGCGCAGATCGGAGGAGCGCACAA | + |
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Preference number: 6 (lower is better) Translates to: GHTGRACHCCAC*AGVCADRRSAQ Trigger: TTGTGCGCTCCTCCGATCTGCGCAAACACCAGCGCAACATGCACAGCAATGACAAGCCCTTCCCGTGTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CAA 72 bp | TTCGGGACTTCTGAGGCTGGGTCCTTATTTGCCTTCTaGCCTCCGTCACTGCCCACGGAGTCCCTAAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: FGTSEAGSLFAF*PPSLPTESLRG Trigger: GCCCCTTAGGGACTCCGTGGGCAGTGACGGAGGCAAGAAGGCAAATAAGGACCCAGCCTCAGAAGTCCCGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS TCA 72 bp | GCATCTCCCCAGGTTTCTGCGCCACACACCCAGCACTaGAGCACTCAGGCCAGTTCTCTTCCTCTTTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ASPQVSAPHTQH*STQASSLPLCR Trigger: CCTGCAAAGAGGAAGAGAACTGGCCTGAGTGCTTCAGTGCTGGGTGTGTGGCGCAGAAACCTGGGGAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CCA 72 bp | TCTTCCTGCCCGCTGCCTTCTGGGCCCGCCTGGCCCTaGACTTTTCTACTGCTCCGTACTTTTACTAACAGG | + |
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Preference number: 6 (lower is better) Translates to: SSCPLPSGPAWP*TFLLLRTFTNR Trigger: CCTGTTAGTAAAAGTACGGAGCAGTAGAAAAGTCCAGGGCCAGGCGGGCCCAGAAGGCAGCGGGCAGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CCA 72 bp | GCTTGGAGCCATGATGTTCCGCGGGGACCTGAACTTTaGTGGACTTCTGGAAGGCCCGCACACACCTATCGA | + |
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Preference number: 6 (lower is better) Translates to: AWSHDVPRGPEL*WTSGRPAHTYR Trigger: TCGATAGGTGTGTGCGGGCCTTCCAGAAGTCCACCAAAGTTCAGGTCCCCGCGGAACATCATGGCTCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CCA 72 bp | CACGGGAAGGGCTTGTCATTGCTGTGCATGTTGCGCTaGTGTTTGCGCAGATCGGAGGAGCGCACAAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: HGKGLSLLCMLR*CLRRSEERTKA Trigger: GGCTTTTGTGCGCTCCTCCGATCTGCGCAAACACCAGCGCAACATGCACAGCAATGACAAGCCCTTCCCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CAA 72 bp | AAGGGCTTGTCATTGCTGTGCATGTTGCGCTGGTGTTaGCGCAGATCGGAGGAGCGCACAAAAGCCCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: KGLSLLCMLRWC*RRSEERTKALP Trigger: CGGCAGGGCTTTTGTGCGCTCCTCCGATCTGCGCAAACACCAGCGCAACATGCACAGCAATGACAAGCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CAA 72 bp | AGGGACAGGCTCCTTCTTGCAGGTGTCATGCTTGGCTaGATGCCTTTGGAGGTGGCTGGAGCGGGTGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: RDRLLLAGVMLG*MPLEVAGAGEG Trigger: ACCTTCACCCGCTCCAGCCACCTCCAAAGGCATCAAGCCAAGCATGACACCTGCAAGAAGGAGCCTGTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS GCA 72 bp | CTTCACTCTCCAAGCTCATTCTCAGCATCTGAGTGCTaGCAAGGGGCACCTTGGTCCACCTATCCTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LHSPSSFSASEC*QGAPWSTYPGS Trigger: ACTCCCAGGATAGGTGGACCAAGGTGCCCCTTGGCAGCACTCAGATGCTGAGAATGAGCTTGGAGAGTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS GCA 72 bp | CTTCTTCACTCTCCAAGCTCATTCTCAGCATCTGAGTaGTGCCAAGGGGCACCTTGGTCCACCTATCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LLHSPSSFSASE*CQGAPWSTYPG Trigger: CCCAGGATAGGTGGACCAAGGTGCCCCTTGGCAGCACTCAGATGCTGAGAATGAGCTTGGAGAGTGAAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS TCA 72 bp | TCCTCTTCTTCACTCTCCAAGCTCATTCTCAGCATCTaGGTGCTGCCAAGGGGCACCTTGGTCCACCTATCC | + |
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Preference number: 6 (lower is better) Translates to: SSSSLSKLILSI*VLPRGTLVHLS Trigger: GGATAGGTGGACCAAGGTGCCCCTTGGCAGCACTCAGATGCTGAGAATGAGCTTGGAGAGTGAAGAAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CAA 72 bp | AAACTTCTGGAAGGGGCACCAAGAGCCTCCTGTAATTaGGGGGAGTCTCGAATCTGGGTGATCCTCGATGCC | + |
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Preference number: 6 (lower is better) Translates to: KLLEGAPRASCN*GESRIWVILDA Trigger: GGCATCGAGGATCACCCAGATTCGAGACTCCCCCAAATTACAGGAGGCTCTTGGTGCCCCTTCCAGAAGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CCA 72 bp | AGTGTCAAACTGCGAGTCGGTGTTGTTCTGAGTTCCTaGGGAGCCACCCTTCCTACCATCCTCTTCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: SVKLRVGVVLSS*GATLPTILFFT Trigger: AGTGAAGAAGAGGATGGTAGGAAGGGTGGCTCCCCAGGAACTCAGAACAACACCGACTCGCAGTTTGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CAA 72 bp | GTACTCTCAGACCTGGGAAAGTGCTCCAGAGAGTTCTaGTCTAGGGAAGATGCCTCAACACTGTTCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VLSDLGKCSREF*SREDASTLFCA Trigger: GGCACAGAACAGTGTTGAGGCATCTTCCCTAGACAAGAACTCTCTGGAGCACTTTCCCAGGTCTGAGAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS TCA 72 bp | ACTTTTACTAACAGGCTGGCAGGAATGGTTGGAGTCTaGACTAGTGTACTCTCAGACCTGGGAAAGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: TFTNRLAGMVGV*TSVLSDLGKCS Trigger: GGAGCACTTTCCCAGGTCTGAGAGTACACTAGTTCAGACTCCAACCATTCCTGCCAGCCTGTTAGTAAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CCA 72 bp | GAATGGTTGGAGTCTGAACTAGTGTACTCTCAGACCTaGGAAAGTGCTCCAGAGAGTTCTTGTCTAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: EWLESELVYSQT*ESAPESSCLGK Trigger: CTTCCCTAGACAAGAACTCTCTGGAGCACTTTCCCAGGTCTGAGAGTACACTAGTTCAGACTCCAACCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CCA 72 bp | TACTGCTCCGTACTTTTACTAACAGGCTGGCAGGAATaGTTGGAGTCTGAACTAGTGTACTCTCAGACCTGG | + |
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Preference number: 6 (lower is better) Translates to: YCSVLLLTGWQE*LESELVYSQTW Trigger: CCAGGTCTGAGAGTACACTAGTTCAGACTCCAACCATTCCTGCCAGCCTGTTAGTAAAAGTACGGAGCAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CAA 72 bp | TGCTCCGTACTTTTACTAACAGGCTGGCAGGAATGGTaGGAGTCTGAACTAGTGTACTCTCAGACCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: CSVLLLTGWQEW*ESELVYSQTWE Trigger: TTCCCAGGTCTGAGAGTACACTAGTTCAGACTCCAACCATTCCTGCCAGCCTGTTAGTAAAAGTACGGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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| CDS CCA 72 bp | GGACTTTTCTACTGCTCCGTACTTTTACTAACAGGCTaGCAGGAATGGTTGGAGTCTGAACTAGTGTACTCT | + |
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Preference number: 6 (lower is better) Translates to: GLFYCSVLLLTG*QEWLESELVYS Trigger: AGAGTACACTAGTTCAGACTCCAACCATTCCTGCCAGCCTGTTAGTAAAAGTACGGAGCAGTAGAAAAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086195.7 |
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