RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP646 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049739

Ensembl transcript IDs: ENSMUST00000050383.8, ENSMUST00000131000.2, ENSMUST00000206340.2

Found 571 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATTCAAGCCTTTGCGTCCTGTGTGTGAGGCCCCAGGTCTCACCGTaGCCAGCATCTTTCCCTCACCAAACCAACCAAGCCCAGGAGTCC +
Preference number: 1 (lower is better)
Translates to: HSSLCVLCVRPQVSP*PASFPHQTNQAQES
Trigger: GGACTCCTGGGCTTGGTTGGTTTGGTGAGGGAAAGATGCTGGGCACGGTGAGACCTGGGGCCTCACACACAGGACGCAAAGGCTTGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR TCA 90 bp GCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTaGGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGA +
Preference number: 1 (lower is better)
Translates to: AAFAPVVLSDLPLPG*ESGSLCILAESGPG
Trigger: TCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR GCA 90 bp CTCCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTaGCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAG +
Preference number: 1 (lower is better)
Translates to: LPCHRQLSHQWFSLI*LSLGENLALSAFWQ
Trigger: CTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR TCA 90 bp AAAGGCTCCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTaGTCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTT +
Preference number: 1 (lower is better)
Translates to: KGSPVTGSFRTSGSL*SASPWVRIWLSLHF
Trigger: AAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGGAGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR GCA 90 bp GGAACAGTTTTCTCTCTAGATGTGGAAGATGAGCTTACAGCCCCATaGCTCCACATCCTTACCCTTCTGCGGGCTGGGTGGAGACCAGCT +
Preference number: 1 (lower is better)
Translates to: GTVFSLDVEDELTAP*LHILTLLRAGWRPA
Trigger: AGCTGGTCTCCACCCAGCCCGCAGAAGGGTAAGGATGTGGAGGCATGGGGCTGTAAGCTCATCTTCCACATCTAGAGAGAAAACTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR CCA 90 bp ACCCCAGCACCCATCTCCCTGACTCACACCAGATTCACACCTCAGTaGCTCAAAGGCAGTCAGGCCTTTCAAGCTAGATGGTCAGTCCAT +
Preference number: 1 (lower is better)
Translates to: TPAPISLTHTRFTPQ*LKGSQAFQARWSVH
Trigger: ATGGACTGACCATCTAGCTTGAAAGGCCTGACTGCCTTTGAGCCACTGAGGTGTGAATCTGGTGTGAGTCAGGGAGATGGGTGCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR CCA 90 bp CTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTaGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGA +
Preference number: 1 (lower is better)
Translates to: LICLSLGENLALSAF*QSLALENHGDKGLG
Trigger: TCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR CCA 90 bp TTCTCAGGAACCATCACCACTATCCTGTCCTTCCCAGTCAAGCTCTaGGCAAGGGCATACCATTTCAGGGACATCACCCTTGGTGGCTGT +
Preference number: 1 (lower is better)
Translates to: FSGTITTILSFPVKL*ARAYHFRDITLGGC
Trigger: ACAGCCACCAAGGGTGATGTCCCTGAAATGGTATGCCCTTGCCCAGAGCTTGACTGGGAAGGACAGGATAGTGGTGATGGTTCCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR GCA 90 bp CAAGCAACTCCTGAGCAAAATGAGGAGAGCAAGCCTCTCCCTGCCTaGCCCATCCTTCAGTCAACTGTTCTTTGGAGACCTGTCATTCAG +
Preference number: 1 (lower is better)
Translates to: QATPEQNEESKPLPA*PILQSTVLWRPVIQ
Trigger: CTGAATGACAGGTCTCCAAAGAACAGTTGACTGAAGGATGGGGCAGGCAGGGAGAGGCTTGCTCTCCTCATTTTGCTCAGGAGTTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR CCA 90 bp TCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTaGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCT +
Preference number: 1 (lower is better)
Translates to: SPWVRIWLSLHFGRV*PWKIMVTKGWEGDP
Trigger: AGGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR CCA 90 bp TGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTaGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCTTCATCC +
Preference number: 1 (lower is better)
Translates to: WVRIWLSLHFGRVWP*KIMVTKGWEGDPSS
Trigger: GGATGAAGGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR TCA 90 bp CAAAGGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATaGAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTAGG +
Preference number: 1 (lower is better)
Translates to: QRVGKEILHPSWAQT*RLPHALLGGKSQIR
Trigger: CCTAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR GCA 90 bp AAGAAAACAGCCATTCCTCCTTGGTTATATAAGAGTTCACACCGCTaGCCAACCTACCCCAGCACCCATCTCCCTGACTCACACCAGATT +
Preference number: 1 (lower is better)
Translates to: KKTAIPPWLYKSSHR*PTYPSTHLPDSHQI
Trigger: AATCTGGTGTGAGTCAGGGAGATGGGTGCTGGGGTAGGTTGGGCAGCGGTGTGAACTCTTATATAACCAAGGAGGAATGGCTGTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR TCA 90 bp ATCCCAGCAACCACATGGTGGCTCACAACCATCAGTAATGAGATCTaGTGCCCTCTTCCGGTGTGTCTGAAGACAGCTATGGTGTACTTA +
Preference number: 1 (lower is better)
Translates to: IPATTWWLTTISNEI*CPLPVCLKTAMVYL
Trigger: TAAGTACACCATAGCTGTCTTCAGACACACCGGAAGAGGGCATCAGATCTCATTACTGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR CCA 90 bp CATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTaGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACT +
Preference number: 1 (lower is better)
Translates to: HFGRVWPWKIMVTKG*EGDPSSFMGTDMKT
Trigger: AGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR-3UTR TCA 90 bp CTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCCTACACCACCTCTCAGCCCTGTTTGCGTCCTGTGTGTaGGGCCCCAGGTCTCACCGT +
Preference number: 2 (lower is better)
Translates to: LRREGEDTEGGLHHLSALFASCV*GPRSHR
Trigger: ACGGTGAGACCTGGGGCCTCACACACAGGACGCAAA...CAGGGCTGAGAGGTGGTGTAGGCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR GCA 90 bp TGCGTCCTGTGTGTGAGGCCCCAGGTCTCACCGTGCCCAGCATCTTTCCCTCACGAATCTGGCTCTCTCTaGATTTTGGCAGAGTCTGGC +
Preference number: 2 (lower is better)
Translates to: CVLCVRPQVSPCPASFPHESGSL*ILAESG
Trigger: GCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTC...GTGAGGGAAAGATGCTGGGCACGGTGAGACCTGGGGCCTCACACACAGGACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR CCA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTACCCTTCTGCGGGCTaGGTGGAGACCAGCTTACCA +
Preference number: 2 (lower is better)
Translates to: SHQWFSLICLSLGENLALYPSAG*VETSLP
Trigger: TGGTAAGCTGGTCTCCACCCAGCCCGCAGAAGGGTA...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR CCA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTTTAGGGTCCTCTTCGTaGGAAGAGGAGATGGGGATG +
Preference number: 2 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPLGSSS*EEEMGM
Trigger: CATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAA...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR-3UTR GCA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCAAGCATTCAAGCCTTTaGGTCCTGTGTGTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: SHQWFSLICLSLGENLALKHSSL*VLCVRP
Trigger: GGGCCTCACACACAGGACGCAAAGGCTTGAATGCTT...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR TCA 90 bp AGGCTCCTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCCTACACCACCTCTCACTGGCTCATTGTACCTaGAGTTACAGTTCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: RLLRREGEDTEGGLHHLSLAHCT*SYSSQE
Trigger: TTCCTGAGAACTGTAACTTCAGGTACAATGAGCCAG...TGAGAGGTGGTGTAGGCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAGGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR CCA 90 bp CTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCCTACACCACCTCTCAGCCCTGTCCACCCTTTTCCTCTaGAAACTGTCACTGACTAAA +
Preference number: 2 (lower is better)
Translates to: LRREGEDTEGGLHHLSALSTLFL*KLSLTK
Trigger: TTTAGTCAGTGACAGTTTCCAGAGGAAAAGGGTGGA...CAGGGCTGAGAGGTGGTGTAGGCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR CCA 90 bp TTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCGTGGGAAGAGGAGATaGGGATGCCCAAGCAACTCC +
Preference number: 2 (lower is better)
Translates to: FGRVWPWKIMVTKGWEGDRGKRR*GCPSNS
Trigger: GGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACG...ATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR-3UTR TCA 90 bp ACAGTTTTCTCTCTAGATGTGGAAGATGAGCTTACAGCCCCATGCCTCCACATCACCAGTGGTTCTCTCTaGTCTGCCTCTCCCTGGGTG +
Preference number: 2 (lower is better)
Translates to: TVFSLDVEDELTAPCLHITSGSL*SASPWV
Trigger: CACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGT...GATGTGGAGGCATGGGGCTGTAAGCTCATCTTCCACATCTAGAGAGAAAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR TCA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCCAGCACCCATCTCCCTaGCTCACACCAGATTCACAC +
Preference number: 2 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFQHPSP*LTPDSH
Trigger: GTGTGAATCTGGTGTGAGTCAGGGAGATGGGTGCTG...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR GCA 90 bp GGTGACAAAGGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAAAGCCTCTCCCTGCCTaGCCCATCCTTCAGTCAACT +
Preference number: 2 (lower is better)
Translates to: GDKGLGRRSFILHGHRHEKPLPA*PILQST
Trigger: AGTTGACTGAAGGATGGGGCAGGCAGGGAGAGGCTT...TTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCCTTTGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR-3UTR GCA 90 bp TCAGAGACAAACTATAGGGGGAGGAGACAGAAGAATGAGCATTGGCCAGTGACCAAGCCTCTCCCTGCCTaGCCCATCCTTCAGTCAACT +
Preference number: 2 (lower is better)
Translates to: SETNYRGRRQKNEHWPVTKPLPA*PILQST
Trigger: AGTTGACTGAAGGATGGGGCAGGCAGGGAGAGGCTT...GGTCACTGGCCAATGCTCATTCTTCTGTCTCCTCCCCCTATAGTTTGTCTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR TCA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCATGAGCATTGGCCAGTaGCCCAGCACACAGCTAAGT +
Preference number: 2 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFMSIGQ*PSTQLS
Trigger: ACTTAGCTGTGTGCTGGGTCACTGGCCAATGCTCAT...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR CCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAATTAGGGTCCTCTTCGTaGGAAGAGGAGATGGGGATG +
Preference number: 2 (lower is better)
Translates to: LALSAFWQSLALENHGDKLGSSS*EEEMGM
Trigger: CATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAA...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR CAA 90 bp GCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTaGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGAC +
Preference number: 2 (lower is better)
Translates to: AFWQSLALENHGDKG*GRRSFILHGHRHED
Trigger: GTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR-3UTR TCA 90 bp TCAGAGACAAACTATAGGGGGAGGAGACAGAAGAATGAGCATTGGCCAGTGACCCCTGGAAAATCATGGTaGCAAAGGGTTGGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: SETNYRGRRQKNEHWPVTPGKSW*QRVGKE
Trigger: CTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGG...GGTCACTGGCCAATGCTCATTCTTCTGTCTCCTCCCCCTATAGTTTGTCTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR GCA 90 bp GTTACAGTTCTCAGGAACCATCACCACTATCCTGTCCTTCCCAGTCAAGCTCTGTGGTTCTCTCTGATCTaGCTCTCCCTGGGTGAGAAT +
Preference number: 2 (lower is better)
Translates to: VTVLRNHHHYPVLPSQALWFSLI*LSLGEN
Trigger: ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA...CAGAGCTTGACTGGGAAGGACAGGATAGTGGTGATGGTTCCTGAGAACTGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR GCA 90 bp GTTACAGTTCTCAGGAACCATCACCACTATCCTGTCCTTCCCAGTCAAGCTCTGCCTCTGCCTTGGACCTaGAGACCACTAACTATCTGT +
Preference number: 2 (lower is better)
Translates to: VTVLRNHHHYPVLPSQALPLPWT*RPLTIC
Trigger: ACAGATAGTTAGTGGTCTGCAGGTCCAAGGCAGAGG...CAGAGCTTGACTGGGAAGGACAGGATAGTGGTGATGGTTCCTGAGAACTGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR CCA 90 bp ACAGTTTTCTCTCTAGATGTGGAAGATGAGCTTACAGCCCCATGCCTCCACATCGCTCTCTCTGCATTTTaGCAGAGTCTGGCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: TVFSLDVEDELTAPCLHIALSAF*QSLALE
Trigger: TTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGC...GATGTGGAGGCATGGGGCTGTAAGCTCATCTTCCACATCTAGAGAGAAAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR CCA 90 bp TGGACCTGCAGACCACTAACTATCTGTATGACAACCCAGGAGTTGGCAATCCTTCCCTGGGTGAGAATCTaGCTCTCTCTGCATTTTGGC +
Preference number: 2 (lower is better)
Translates to: WTCRPLTICMTTQELAILPWVRI*LSLHFG
Trigger: GCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGG...AAGGATTGCCAACTCCTGGGTTGTCATACAGATAGTTAGTGGTCTGCAGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR CAA 90 bp CAGTCAAGCTCTGGGCAAGGGCATACCATTTCAGGGACATCACCCTaGGTGGCTGTAGATGGAACAGTTTTCTCTCTAGATGTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: QSSSGQGHTISGTSP*VAVDGTVFSLDVED
Trigger: ATCTTCCACATCTAGAGAGAAAACTGTTCCATCTACAGCCACCAAGGGTGATGTCCCTGAAATGGTATGCCCTTGCCCAGAGCTTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR TCA 90 bp ACTATCCTGTCCTTCCCAGTCAAGCTCTGGGCAAGGGCATACCATTTCAGGGACTTCTCAGATGCTCACTaGAAGAAAACAGCCATTCCT +
Preference number: 2 (lower is better)
Translates to: TILSFPVKLWARAYHFRDFSDAH*KKTAIP
Trigger: AGGAATGGCTGTTTTCTTTCAGTGAGCATCTGAGAA...GTCCCTGAAATGGTATGCCCTTGCCCAGAGCTTGACTGGGAAGGACAGGATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR CCA 90 bp TCAGAGACAAACTATAGGGGGAGGAGACAGAAGAATGAGCATTGGCCAGTGACCTTTCTCCTTAGTCCCTaGCTTCTTGCCAACTCTAGG +
Preference number: 2 (lower is better)
Translates to: SETNYRGRRQKNEHWPVTFLLSP*LLANSR
Trigger: CCTAGAGTTGGCAAGAAGCCAGGGACTAAGGAGAAA...GGTCACTGGCCAATGCTCATTCTTCTGTCTCCTCCCCCTATAGTTTGTCTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR GCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAATGAAGACTACCTCATaGCCTTCTTGGGGGAAAAAG +
Preference number: 2 (lower is better)
Translates to: LALSAFWQSLALENHGDKMKTTS*PSWGKK
Trigger: CTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCAT...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR-3UTR GCA 90 bp TCAGAGACAAACTATAGGGGGAGGAGACAGAAGAATGAGCATTGGCCAGTGACCATCAAGATTCTCAGATaGTCACTGAAAGAAAACAGC +
Preference number: 2 (lower is better)
Translates to: SETNYRGRRQKNEHWPVTIKILR*SLKENS
Trigger: GCTGTTTTCTTTCAGTGAGCATCTGAGAATCTTGAT...GGTCACTGGCCAATGCTCATTCTTCTGTCTCCTCCCCCTATAGTTTGTCTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR CAA 90 bp CTGCTGGTGCCACTGAGGCTCCTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCGAGCCCGCCTCTGCCTaGGACCTGCAGACCACTAAC +
Preference number: 3 (lower is better)
Translates to: LLVPLRLLRREGEDTEGGEPASA*DLQTTN
Trigger: GTTAGTGGTCTGCAGGTCCAAGGCAGAGGCGGGCTC...GCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAGGAGCCTCAGTGGCACCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR GCA 72 bp CTTTGCGTCCTGTGTGTGAGGCCCCAGGTCTCACCGTaGCCAGCATCTTTCCCTCACCAAACCAACCAAGCC +
Preference number: 3 (lower is better)
Translates to: LCVLCVRPQVSP*PASFPHQTNQA
Trigger: GGCTTGGTTGGTTTGGTGAGGGAAAGATGCTGGGCACGGTGAGACCTGGGGCCTCACACACAGGACGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR CAA 90 bp AGGCTCCTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCCTACACCACCTCTCACCCCTCAGGCTCCACTaGACTCTCTTTTCTGCTTGC +
Preference number: 3 (lower is better)
Translates to: RLLRREGEDTEGGLHHLSPLRLH*TLFSAC
Trigger: GCAAGCAGAAAAGAGAGTCAAGTGGAGCCTGAGGGG...TGAGAGGTGGTGTAGGCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR TCA 72 bp CCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTaGTCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCT +
Preference number: 3 (lower is better)
Translates to: PVTGSFRTSGSL*SASPWVRIWLS
Trigger: AGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR GCA 72 bp CACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTaGCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCA +
Preference number: 3 (lower is better)
Translates to: HRQLSHQWFSLI*LSLGENLALSA
Trigger: TGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR GCA 72 bp AGCTTACAGCCCCATGCCTCCACATCCTTACCCTTCTaGGGGCTGGGTGGAGACCAGCTTACCAGAGATTCA +
Preference number: 3 (lower is better)
Translates to: SLQPHASTSLPF*GLGGDQLTRDS
Trigger: TGAATCTCTGGTAAGCTGGTCTCCACCCAGCCCGCAGAAGGGTAAGGATGTGGAGGCATGGGGCTGTAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR CCA 72 bp AGCCCCATGCCTCCACATCCTTACCCTTCTGCGGGCTaGGTGGAGACCAGCTTACCAGAGATTCACAGTGAT +
Preference number: 3 (lower is better)
Translates to: SPMPPHPYPSAG*VETSLPEIHSD
Trigger: ATCACTGTGAATCTCTGGTAAGCTGGTCTCCACCCAGCCCGCAGAAGGGTAAGGATGTGGAGGCATGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR CAA 90 bp AGGCTCCTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCCTACACCACCTCTCATACCTCATGCCCTTCTaGGGGGAAAAAGCCAGATTA +
Preference number: 3 (lower is better)
Translates to: RLLRREGEDTEGGLHHLSYLMPF*GEKARL
Trigger: TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTA...TGAGAGGTGGTGTAGGCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAGGAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR TCA 72 bp AGATGGATAAGCATTCAAGCCTTTGCGTCCTGTGTGTaGGGCCCCAGGTCTCACCGTGCCCAGCATCTTTCC +
Preference number: 3 (lower is better)
Translates to: RWISIQAFASCV*GPRSHRAQHLS
Trigger: GGAAAGATGCTGGGCACGGTGAGACCTGGGGCCTCACACACAGGACGCAAAGGCTTGAATGCTTATCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR CCA 72 bp AAAAGGCTCCCCTGTCACAGGCAGCTTTCGCACCAGTaGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAAT +
Preference number: 3 (lower is better)
Translates to: KRLPCHRQLSHQ*FSLICLSLGEN
Trigger: ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGGAGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR CCA 72 bp CCATGCCTCCACATCCTTACCCTTCTGCGGGCTGGGTaGAGACCAGCTTACCAGAGATTCACAGTGATAGAG +
Preference number: 3 (lower is better)
Translates to: PCLHILTLLRAG*RPAYQRFTVIE
Trigger: CTCTATCACTGTGAATCTCTGGTAAGCTGGTCTCCACCCAGCCCGCAGAAGGGTAAGGATGTGGAGGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR TCA 72 bp GCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTaGGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCT +
Preference number: 3 (lower is better)
Translates to: APVVLSDLPLPG*ESGSLCILAES
Trigger: AGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR GCA 72 bp CCTGAGCAAAATGAGGAGAGCAAGCCTCTCCCTGCCTaGCCCATCCTTCAGTCAACTGTTCTTTGGAGACCT +
Preference number: 3 (lower is better)
Translates to: PEQNEESKPLPA*PILQSTVLWRP
Trigger: AGGTCTCCAAAGAACAGTTGACTGAAGGATGGGGCAGGCAGGGAGAGGCTTGCTCTCCTCATTTTGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR GCA 72 bp GCCATTCCTCCTTGGTTATATAAGAGTTCACACCGCTaGCCAACCTACCCCAGCACCCATCTCCCTGACTCA +
Preference number: 3 (lower is better)
Translates to: AIPPWLYKSSHR*PTYPSTHLPDS
Trigger: TGAGTCAGGGAGATGGGTGCTGGGGTAGGTTGGGCAGCGGTGTGAACTCTTATATAACCAAGGAGGAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR CCA 72 bp CCCATCTCCCTGACTCACACCAGATTCACACCTCAGTaGCTCAAAGGCAGTCAGGCCTTTCAAGCTAGATGG +
Preference number: 3 (lower is better)
Translates to: PISLTHTRFTPQ*LKGSQAFQARW
Trigger: CCATCTAGCTTGAAAGGCCTGACTGCCTTTGAGCCACTGAGGTGTGAATCTGGTGTGAGTCAGGGAGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR TCA 72 bp GCAGCCTTGGCTAACAGGCCCCTGGCTCATTGTACCTaGAGTTACAGTTCTCAGGAACCATCACCACTATCC +
Preference number: 3 (lower is better)
Translates to: AALANRPLAHCT*SYSSQEPSPLS
Trigger: GGATAGTGGTGATGGTTCCTGAGAACTGTAACTTCAGGTACAATGAGCCAGGGGCCTGTTAGCCAAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR CCA 72 bp ACCATCACCACTATCCTGTCCTTCCCAGTCAAGCTCTaGGCAAGGGCATACCATTTCAGGGACATCACCCTT +
Preference number: 3 (lower is better)
Translates to: TITTILSFPVKL*ARAYHFRDITL
Trigger: AAGGGTGATGTCCCTGAAATGGTATGCCCTTGCCCAGAGCTTGACTGGGAAGGACAGGATAGTGGTGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR TCA 72 bp GGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATaGAGACTACCTCATGCCCTTCTTGGGGGAAAAAGC +
Preference number: 3 (lower is better)
Translates to: GKEILHPSWAQT*RLPHALLGGKS
Trigger: GCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR CCA 72 bp AGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTaGGAAGGAGATCCTTCATCCTTCATGGGCACAGAC +
Preference number: 3 (lower is better)
Translates to: RVWPWKIMVTKG*EGDPSSFMGTD
Trigger: GTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR CCA 72 bp CTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTaGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAA +
Preference number: 3 (lower is better)
Translates to: LSLGENLALSAF*QSLALENHGDK
Trigger: TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR CCA 72 bp ATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTaGAAAATCATGGTGACAAAGGGTTGGGAAGGAGAT +
Preference number: 3 (lower is better)
Translates to: IWLSLHFGRVWP*KIMVTKGWEGD
Trigger: ATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR CCA 72 bp GTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTaGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAA +
Preference number: 3 (lower is better)
Translates to: VRIWLSLHFGRV*PWKIMVTKGWE
Trigger: TTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR CCA 72 bp AGGAGTTGGCAATCCTTCACCTTTCTCCTTAGTCCCTaGCTTCTTGCCAACTCTAGGGAAGACCAGAACCTA +
Preference number: 3 (lower is better)
Translates to: RSWQSFTFLLSP*LLANSREDQNL
Trigger: TAGGTTCTGGTCTTCCCTAGAGTTGGCAAGAAGCCAGGGACTAAGGAGAAAGGTGAAGGATTGCCAACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR CCA 72 bp ACAAACTATAGGGGGAGGAGACAGAAGAATGAGCATTaGCCAGTGACCCAGCACACAGCTAAGTCAGCAGTA +
Preference number: 3 (lower is better)
Translates to: TNYRGRRQKNEH*PVTQHTAKSAV
Trigger: TACTGCTGACTTAGCTGTGTGCTGGGTCACTGGCCAATGCTCATTCTTCTGTCTCCTCCCCCTATAGTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR CCA 72 bp GGGTGTGTGGGGGAAATGCTGGCAGAGAGAGTAGTTTaGTTAGCTCCTATAAGATCTGTAGCAGAAGGAGGA +
Preference number: 3 (lower is better)
Translates to: GCVGEMLAERVV*LAPIRSVAEGG
Trigger: TCCTCCTTCTGCTACAGATCTTATAGGAGCTAACCAAACTACTCTCTCTGCCAGCATTTCCCCCACACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR-3UTR CAA 90 bp TTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATACCTCATGCCCTTCTaGGGGGAAAAAGCCAGATTA +
Preference number: 3 (lower is better)
Translates to: FWQSLALENHGDKGLGRRYLMPF*GEKARL
Trigger: TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTA...TCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR-3UTR CAA 90 bp TGGACCTGCAGACCACTAACTATCTGTATGACAACCCAGGAGTTGGCAATCCTTCATGGTGACAAAGGGTaGGGAAGGAGATCCTTCATC +
Preference number: 3 (lower is better)
Translates to: WTCRPLTICMTTQELAILHGDKG*GRRSFI
Trigger: GATGAAGGATCTCCTTCCCAACCCTTTGTCACCATG...AAGGATTGCCAACTCCTGGGTTGTCATACAGATAGTTAGTGGTCTGCAGGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR TCA 72 bp TGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTaGCAAAGGGTTGGGAAGGAGATCCTTCATCCTTCA +
Preference number: 3 (lower is better)
Translates to: CILAESGPGKSW*QRVGKEILHPS
Trigger: TGAAGGATGAAGGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR TCA 72 bp CTCAACTGGGCCTGGCTTCAAAGAAACAATTATCTGTaGGTCAATCCTTCAGTTAAAAGGGGTGTGTGGGGG +
Preference number: 3 (lower is better)
Translates to: LNWAWLQRNNYL*VNPSVKRGVWG
Trigger: CCCCCACACACCCCTTTTAACTGAAGGATTGACTCACAGATAATTGTTTCTTTGAAGCCAGGCCCAGTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR TCA 72 bp TGTAGATGGAACAGTTTTCTCTCTAGATGTGGAAGATaGGCTTACAGCCCCATGCCTCCACATCCTTACCCT +
Preference number: 3 (lower is better)
Translates to: CRWNSFLSRCGR*AYSPMPPHPYP
Trigger: AGGGTAAGGATGTGGAGGCATGGGGCTGTAAGCTCATCTTCCACATCTAGAGAGAAAACTGTTCCATCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
3UTR TCA 72 bp GAGACCAGCTTACCAGAGATTCACAGTGATAGAGGATaGGAGATAGGAACTAATGACTGTGGCTGCTCAACT +
Preference number: 3 (lower is better)
Translates to: ETSLPEIHSDRG*EIGTNDCGCST
Trigger: AGTTGAGCAGCCACAGTCATTAGTTCCTATCTCTCATCCTCTATCACTGTGAATCTCTGGTAAGCTGGTCTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp CTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCCTACACCACCTCTCAGCCCTGGGGCTACTGGGACTCTaGCTGTGTCCCCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRREGEDTEGGLHHLSALGLLGL*LCPPGL
Trigger: GAGGCCTGGGGGACACAGTCAGAGTCCCAGTAGCCC...CAGGGCTGAGAGGTGGTGTAGGCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TGCGTCCTGTGTGTGAGGCCCCAGGTCTCACCGTGCCCAGCATCTTTCCCTCACGCCTGGCAGCCAAAGTaGCCAGTCTGGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CVLCVRPQVSPCPASFPHAWQPK*PVWWLC
Trigger: GCAGAGCCACCAGACTGGCCACTTTGGCTGCCAGGC...GTGAGGGAAAGATGCTGGGCACGGTGAGACCTGGGGCCTCACACACAGGACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp CTGCTGGTGCCACTGAGGCTCCTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCCTTGACAGGGCTGGGTaGACCTTCAGTCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: LLVPLRLLRREGEDTEGGLDRAG*TFSPWI
Trigger: GATCCAGGGACTGAAGGTTCACCCAGCCCTGTCAAG...GCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAGGAGCCTCAGTGGCACCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGCTACTGGGACTCTaGCTGTGTCCCCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPGLLGL*LCPPGL
Trigger: GAGGCCTGGGGGACACAGTCAGAGTCCCAGTAGCCC...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp CTGCTGGTGCCACTGAGGCTCCTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCGAGTCAGTTTCTGGGTaGCCCTACTCCTGCGTCGCT +
Preference number: 4 (lower is better)
Translates to: LLVPLRLLRREGEDTEGGESVSG*PYSCVA
Trigger: AGCGACGCAGGAGTAGGGGCACCCAGAAACTGACTC...GCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAGGAGCCTCAGTGGCACCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGCTGGTGCCACTGAGGCTCCTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCATGGTGTGGGCCTTCTaGTGGTTCAGCAGGCTACCG +
Preference number: 4 (lower is better)
Translates to: LLVPLRLLRREGEDTEGGMVWAF*WFSRLP
Trigger: CGGTAGCCTGCTGAACCACCAGAAGGCCCACACCAT...GCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAGGAGCCTCAGTGGCACCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp CTGCTGGTGCCACTGAGGCTCCTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCCAGTACCATCTGACCTaGCCTCCAGTCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: LLVPLRLLRREGEDTEGGQYHLT*PPVPSH
Trigger: ATGACTGGGGACTGGAGGGCAGGTCAGATGGTACTG...GCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAGGAGCCTCAGTGGCACCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGCTGGTGCCACTGAGGCTCCTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCTGCCATCCCAGCCTGTaGACCTCTGGTCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LLVPLRLLRREGEDTEGGCHPSL*TSGLLH
Trigger: ATGGAGAAGACCAGAGGTCCACAGGCTGGGATGGCA...GCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAGGAGCCTCAGTGGCACCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATATCTTCCCACGTCCCTaGCGCTGCCCTGGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RQLSHQWFSLICLSLGENIFPRP*RCPGVS
Trigger: GCTGACCCCAGGGCAGCGTCAGGGACGTGGGAAGAT...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR TCA 90 bp CTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCCTACACCACCTCTCAGCCCTGCCCACACTTCTTCTTTaGCACCTGCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LRREGEDTEGGLHHLSALPTLLL*HLPAPP
Trigger: TGGAGGAGCTGGCAGGTGTCAAAGAAGAAGTGTGGG...CAGGGCTGAGAGGTGGTGTAGGCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTCTCCTGCCCTGCCTCTaGTGCATTCTGGGGCTCACT +
Preference number: 4 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPLLPCL*CILGLT
Trigger: AGTGAGCCCCAGAATGCAGCAGAGGCAGGGCAGGAG...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp CTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCCTACACCACCTCTCAGCCCTGCAGCATGCTTGTAGGTaGGGCCACACACTTCACAGC +
Preference number: 4 (lower is better)
Translates to: LRREGEDTEGGLHHLSALQHACR*GHTLHS
Trigger: GCTGTGAAGTGTGTGGCCGCACCTACAAGCATGCTG...CAGGGCTGAGAGGTGGTGTAGGCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp AGGCTCCTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCCTACACCACCTCTCAGGTACAACGTACAGCTaGTGCCCTCTGGGGACATCC +
Preference number: 4 (lower is better)
Translates to: RLLRREGEDTEGGLHHLSGTTYS*CPLGTS
Trigger: GGATGTCCCCAGAGGGCAGCAGCTGTACGTTGTACC...TGAGAGGTGGTGTAGGCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATTGGTCCCTCCTGGGGTaGATGGACCCGTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: RQLSHQWFSLICLSLGENWSLLG*MDPSMA
Trigger: GGCCATGGACGGGTCCATGCACCCCAGGAGGGACCA...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGCTGGTGCCACTGAGGCTCCTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCATCGCAGCCATGGTATaGAAATGCTTGGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: LLVPLRLLRREGEDTEGGIAAMV*KCLAQA
Trigger: GGCCTGTGCCAAGCATTTCCATACCATGGCTGCGAT...GCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAGGAGCCTCAGTGGCACCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCCTACACCACCTCTCAGCCCTGTCCCCACCTGCTGTGTaGATTCTGTGCCTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LRREGEDTEGGLHHLSALSPPAV*ILCLLN
Trigger: GTTCAGGAGGCACAGAATCCACACAGCAGGTGGGGA...CAGGGCTGAGAGGTGGTGTAGGCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGTGTGGGCCTTCTGGTaGTTCAGCAGGCTACCGGCA +
Preference number: 4 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPVWAFW*FSRLPA
Trigger: TGCCGGTAGCCTGCTGAACCACCAGAAGGCCCACAC...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGATGGGGCCTCCTaGGCTTTCCCTGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: SHQWFSLICLSLGENLALSDGAS*AFPGPG
Trigger: TCCTGGTCCAGGGAAAGCTCAGGAGGCCCCATCAGA...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp ACCGTGCCCAGCATCTTTCCCTCACCAAACCAACCAAGCCCAGGAGTCCTAGAAAGGAGGACCCACCTCTaGCATCCCAGCCTGTGGACC +
Preference number: 4 (lower is better)
Translates to: TVPSIFPSPNQPSPGVLERRTHL*HPSLWT
Trigger: GGTCCACAGGCTGGGATGGCAGAGGTGGGTCCTCCT...TTCTAGGACTCCTGGGCTTGGTTGGTTTGGTGAGGGAAAGATGCTGGGCACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp AGGCTCCTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCCTACACCACCTCTCAGGCCGATACTGGGCATaGAGTCTCGAGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RLLRREGEDTEGGLHHLSGRYWA*SLEWFF
Trigger: GAAGAACCACTCGAGACTCCATGCCCAGTATCGGCC...TGAGAGGTGGTGTAGGCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAGGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGCTGGTGCCACTGAGGCTCCTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCTGTTCCTCATCTCCGTaGAATGCTGCTTCCATTCCC +
Preference number: 4 (lower is better)
Translates to: LLVPLRLLRREGEDTEGGCSSSP*NAASIP
Trigger: GGGAATGGAAGCAGCATTCCACGGAGATGAGGAACA...GCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAGGAGCCTCAGTGGCACCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGGCCTGGCAGCCAAAGTaGCCAGTCTGGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: IRVLFVGRGDGDAQATPEAWQPK*PVWWLC
Trigger: GCAGAGCCACCAGACTGGCCACTTTGGCTGCCAGGC...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCGCATGGACTCGCTGGTaGTTGGCCAGCTGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: SHQWFSLICLSLGENLALAWTRW*LASCFR
Trigger: GCGAAAGCAGCTGGCCAACCACCAGCGAGTCCATGC...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCGTGAATGGTCCCTCCTaGGGTGCATGGACCCGTCCA +
Preference number: 4 (lower is better)
Translates to: SHQWFSLICLSLGENLALVNGPS*GAWTRP
Trigger: TGGACGGGTCCATGCACCCCAGGAGGGACCATTCAC...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATTCTGGCGGTGGTTGGTaGGGCTCCCGGCATGCTTAT +
Preference number: 4 (lower is better)
Translates to: RQLSHQWFSLICLSLGENSGGGW*GSRHAY
Trigger: ATAAGCATGCCGGGAGCCTCACCAACCACCGCCAGA...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCCACAGGCCCCACAACTaGAGTCTCCTGTCTGATGGG +
Preference number: 4 (lower is better)
Translates to: SHQWFSLICLSLGENLALHRPHN*SLLSDG
Trigger: CCCATCAGACAGGAGACTTCAGTTGTGGGGCCTGTG...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCGAGGAAGGGCTGTGCTaGGGCTACCTCTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLEEGLC*GYLSWP
Trigger: CGGCCAGGAGAGGTAGCCTCAGCACAGCCCTTCCTC...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCCCCCATTTGGGGCTCTaGGCCTTTGCAGCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: WQSLALENHGDKGLGRRSPHLGL*AFAARV
Trigger: CACCCTCGCTGCAAAGGCTCAGAGCCCCAAATGGGG...GGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCGCAGCCTCCTGCTTCTaGGATGGGCCCCATTTGGGG +
Preference number: 4 (lower is better)
Translates to: WQSLALENHGDKGLGRRSAASCF*DGPHLG
Trigger: CCCCAAATGGGGCCCATCTCAGAAGCAGGAGGCTGC...GGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp AGCCTCTCCCTGCCTGCCCCATCCTTCAGTCAACTGTTCTTTGGAGACCTGTCAGGATTCTGTGCCTCCTaGACACGCTGGGCTACTGGG +
Preference number: 4 (lower is better)
Translates to: SLSLPAPSFSQLFFGDLSGFCAS*TRWATG
Trigger: CCCAGTAGCCCAGCGTGTTCAGGAGGCACAGAATCC...TGACAGGTCTCCAAAGAACAGTTGACTGAAGGATGGGGCAGGCAGGGAGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp AGCCTCTCCCTGCCTGCCCCATCCTTCAGTCAACTGTTCTTTGGAGACCTGTCAGCCGGGCAGCGGTTCTaGAAGCCTTGCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: SLSLPAPSFSQLFFGDLSAGQRF*KPCHRC
Trigger: ACATCTGTGGCAAGGCTTTCAGAACCGCTGCCCGGC...TGACAGGTCTCCAAAGAACAGTTGACTGAAGGATGGGGCAGGCAGGGAGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTCATTCTGGGGCTCACTaGAGCCTCCTGCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPHSGAH*SLLLLR
Trigger: TCTCAGAAGCAGGAGGCTGCAGTGAGCCCCAGAATG...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp AGCCTCTCCCTGCCTGCCCCATCCTTCAGTCAACTGTTCTTTGGAGACCTGTCACTCCTGCCCTGCCTCTaGTGCATTCTGGGGCTCACT +
Preference number: 4 (lower is better)
Translates to: SLSLPAPSFSQLFFGDLSLLPCL*CILGLT
Trigger: AGTGAGCCCCAGAATGCAGCAGAGGCAGGGCAGGAG...TGACAGGTCTCCAAAGAACAGTTGACTGAAGGATGGGGCAGGCAGGGAGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATTGCCCTATGACAGCCTaGTCCTGCCCTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RQLSHQWFSLICLSLGENCPMTA*SCPASA
Trigger: AGCAGAGGCAGGGCAGGAGCAGGCTGTCATAGGGCA...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCGTTGGCAGTAGGCCTTaGCACACTGGCTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SHQWFSLICLSLGENLALVGSRP*HTGCSS
Trigger: ACTGCTGCAGCCAGTGTGGCAAGGCCTACTGCCAAC...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTCACTCTTCCTGGTGCTaGTGCTGGTGTCGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPHSSWC*CWCRRK
Trigger: CTTTCTGCGACACCAGCAGCAGCACCAGGAAGAGTG...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTCTCACTCCCAAGGTGTaGAGCGGTTTCCATGGCATG +
Preference number: 4 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPLTPKV*SGFHGM
Trigger: CATGCCATGGAAACCGCTCCACACCTTGGGAGTGAG...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR CCA 90 bp TCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGTCCCTGACGCTGCCCTaGGGTCAGCTCCAGATTCCC +
Preference number: 4 (lower is better)
Translates to: SLICLSLGENLALSAFWQSLTLP*GQLQIP
Trigger: GGGAATCTGGAGCTGACCCCAGGGCAGCGTCAGGGA...CTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR CCA 90 bp ACCGTGCCCAGCATCTTTCCCTCACCAAACCAACCAAGCCCAGGAGTCCTAGAAGAGGAGGAGTCAGAGTaGCAGATGCCCCTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: TVPSIFPSPNQPSPGVLEEEESE*QMPLFR
Trigger: CCGGAAGAGGGGCATCTGCCACTCTGACTCCTCCTC...TTCTAGGACTCCTGGGCTTGGTTGGTTTGGTGAGGGAAAGATGCTGGGCACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATGTGTGGGCCTTCTGGTaGTTCAGCAGGCTACCGGCA +
Preference number: 4 (lower is better)
Translates to: RQLSHQWFSLICLSLGENVWAFW*FSRLPA
Trigger: TGCCGGTAGCCTGCTGAACCACCAGAAGGCCCACAC...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGTCTGGCGGTGGTTGGTaGGGCTCCCGGCATGCTTAT +
Preference number: 4 (lower is better)
Translates to: SLICLSLGENLALSAFWQSGGGW*GSRHAY
Trigger: ATAAGCATGCCGGGAGCCTCACCAACCACCGCCAGA...CTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCCCTCATGGGACTGCTaGTGTTCCAGCAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: RQLSHQWFSLICLSLGENPSWDC*CSSRSL
Trigger: CAGGGATCTGCTGGAACATCAGCAGTCCCATGAGGG...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGTTAATAAGGCTGCCTaGGTGGCGATAGCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPVNKAA*VAIALA
Trigger: GGCAAGAGCTATCGCCACTCAGGCAGCCTTATTAAC...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TCAGAGACAAACTATAGGGGGAGGAGACAGAAGAATGAGCATTGGCCAGTGACCGAGGAAGGGCTGTGCTaGGGCTACCTCTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: SETNYRGRRQKNEHWPVTEEGLC*GYLSWP
Trigger: CGGCCAGGAGAGGTAGCCTCAGCACAGCCCTTCCTC...GGTCACTGGCCAATGCTCATTCTTCTGTCTCCTCCCCCTATAGTTTGTCTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTAAGGGCCGCTCCGAGGTaGCCTCAGTCTGACAGCCTG +
Preference number: 4 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLRAAPR*PQSDSL
Trigger: CAGGCTGTCAGACTGAGGTCACCTCGGAGCGGCCCT...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCAGGGCCGCTCCGAGGTaGCCTCAGTCTGACAGCCTG +
Preference number: 4 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFRAAPR*PQSDSL
Trigger: CAGGCTGTCAGACTGAGGTCACCTCGGAGCGGCCCT...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp ACCGTGCCCAGCATCTTTCCCTCACCAAACCAACCAAGCCCAGGAGTCCTAGAATGCACTGGTGGTTCATaGGACTGCCAGCATGGCGGT +
Preference number: 4 (lower is better)
Translates to: TVPSIFPSPNQPSPGVLECTGGS*DCQHGG
Trigger: ACCGCCATGCTGGCAGTCTCATGAACCACCAGTGCA...TTCTAGGACTCCTGGGCTTGGTTGGTTTGGTGAGGGAAAGATGCTGGGCACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp AGCCTCTCCCTGCCTGCCCCATCCTTCAGTCAACTGTTCTTTGGAGACCTGTCAAGTTCTCCGGGTGACTaGCATAGGGGTGAGGGATGC +
Preference number: 4 (lower is better)
Translates to: SLSLPAPSFSQLFFGDLSSSPGD*HRGEGC
Trigger: GCATCCCTCACCCCTATGGCAGTCACCCGGAGAACT...TGACAGGTCTCCAAAGAACAGTTGACTGAAGGATGGGGCAGGCAGGGAGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR GCA 90 bp TCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGCTGCCCTGCCTCTGCTaGATTCTGGGGCTCACTGCA +
Preference number: 4 (lower is better)
Translates to: SLICLSLGENLALSAFWQLPCLC*ILGLTA
Trigger: TGCAGTGAGCCCCAGAATGCAGCAGAGGCAGGGCAG...CTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTAGCCTGCTCCTGCCCTaGCTCTGCTGCATTCTGGGG +
Preference number: 4 (lower is better)
Translates to: WFSLICLSLGENLALSAFSLLLP*LCCILG
Trigger: CCCCAGAATGCAGCAGAGGCAGGGCAGGAGCAGGCT...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGGCTGTGTGGATTCTGTaGCTCCTGAACACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: IRVLFVGRGDGDAQATPEAVWIL*LLNTLG
Trigger: GCCCAGCGTGTTCAGGAGGCACAGAATCCACACAGC...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp TTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATGGTCCCTCCTGGGGTaGATGGACCCGTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: FWQSLALENHGDKGLGRRWSLLG*MDPSMA
Trigger: GGCCATGGACGGGTCCATGCACCCCAGGAGGGACCA...TCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCGGTCCAGGCTGGCAGTaGGGACCTCGTCCACTTTTG +
Preference number: 4 (lower is better)
Translates to: WQSLALENHGDKGLGRRSGPGWQ*GPRPLL
Trigger: CAAAAGTGGACGAGGTCCCCACTGCCAGCCTGGACC...GGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTGACGATGGTCCAGGCTaGCAGTGGGGACCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: WFSLICLSLGENLALSAFDDGPG*QWGPRP
Trigger: TGGACGAGGTCCCCACTGCCAGCCTGGACCATCGTC...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGACGGTGGCTGTGGCGGTaGTTCACCAGGCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: FWQSLALENHGDKGLGRRRWLWR*FTRLPL
Trigger: CAGAGGGAGCCTGGTGAACCACCGCCACAGCCACCG...TCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCCGGTGGCTGTGGCGGTaGTTCACCAGGCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFRWLWR*FTRLPL
Trigger: CAGAGGGAGCCTGGTGAACCACCGCCACAGCCACCG...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ACTATCCTGTCCTTCCCAGTCAAGCTCTGGGCAAGGGCATACCATTTCAGGGACTCAGCGTCAGCAGGGTaGGAGGAGGAGTCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: TILSFPVKLWARAYHFRDSASAG*EEESEW
Trigger: CCACTCTGACTCCTCCTCCCACCCTGCTGACGCTGA...GTCCCTGAAATGGTATGCCCTTGCCCAGAGCTTGACTGGGAAGGACAGGATAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTTGGAAAGGGCGAGGGTaGGACTCCAGAAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPWKGRG*DSRKLS
Trigger: TGAAAGCTTTCTGGAGTCCCACCCTCGCCCTTTCCA...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTTGGTGGATCTTTCGGTaGTTTACCAAGCTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPWWIFR*FTKLPP
Trigger: CGGAGGCAGCTTGGTAAACCACCGAAAGATCCACCA...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGTGTCGAGGGTCTGCATaGATGCGCCGGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: IRVLFVGRGDGDAQATPECRGSA*MRRWFL
Trigger: CAAGAACCACCGGCGCATCCATGCAGACCCTCGACA...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGGGCCTCCCTGGCCACTaGCTACCTCTAGTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: IRVLFVGRGDGDAQATPEGLPGH*LPLVWC
Trigger: ACACCAAACTAGAGGTAGCCAGTGGCCAGGGAGGCC...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGGCATGTTGGCCTCCCTaGCCACTGGCTACCTCTAGT +
Preference number: 4 (lower is better)
Translates to: IRVLFVGRGDGDAQATPEACWPP*PLATSS
Trigger: ACTAGAGGTAGCCAGTGGCCAGGGAGGCCAACATGC...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCCTTCTGTAGCATGTTaGCCTCCCTGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: RQLSHQWFSLICLSLGENPSVAC*PPWPLA
Trigger: AGCCAGTGGCCAGGGAGGCCAACATGCTACAGAAGG...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCTGCAGCTGTAGCGCTTaGGGTCCGTGTGGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLCSCSA*GPCGSD
Trigger: GTCGGACCCACACGGACCCCAAGCGCTACAGCTGCA...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCCACAGGCCCCACAACTaGAGTCTCCTGTCTGATGGG +
Preference number: 4 (lower is better)
Translates to: WQSLALENHGDKGLGRRSHRPHN*SLLSDG
Trigger: CCCATCAGACAGGAGACTTCAGTTGTGGGGCCTGTG...GGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATCCCCATTTGGGGCTCTaGGCCTTTGCAGCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GENLALSAFWQSLALENHPHLGL*AFAARV
Trigger: CACCCTCGCTGCAAAGGCTCAGAGCCCCAAATGGGG...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTGCAGCCTCCTGCTTCTaGGATGGGCCCCATTTGGGG +
Preference number: 4 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGAASCF*DGPHLG
Trigger: CCCCAAATGGGGCCCATCTCAGAAGCAGGAGGCTGC...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTGTCCTCTGTCTCCTTaGCTCCCATCTACTTTCCCC +
Preference number: 4 (lower is better)
Translates to: SHQWFSLICLSLGENLALCPLSP*LPSTFP
Trigger: GGGGAAAGTAGATGGGAGTCAAGGAGACAGAGGACA...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCGCCATGGTATGGAAATaGTTGGCACAGGCCCCACAA +
Preference number: 4 (lower is better)
Translates to: SHQWFSLICLSLGENLALAMVWK*LAQAPQ
Trigger: TTGTGGGGCCTGTGCCAAGCATTTCCATACCATGGC...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATGGCTGTCTGCAACTGTaGCACCTACTCCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RQLSHQWFSLICLSLGENGCLQL*HLLPLQ
Trigger: CTGAAGAGGGAGTAGGTGGCACAGTTGCAGACAGCC...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGTGACAAAGGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAAGCCTGCTCCTGCCCTaGCTCTGCTGCATTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GDKGLGRRSFILHGHRHESLLLP*LCCILG
Trigger: CCCCAGAATGCAGCAGAGGCAGGGCAGGAGCAGGCT...TTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCCTTTGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp CTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATTGCCCTATGACAGCCTaGTCCTGCCCTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LGENLALSAFWQSLALENCPMTA*SCPASA
Trigger: AGCAGAGGCAGGGCAGGAGCAGGCTGTCATAGGGCA...ATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGCAGCATGCTTGTAGGTaGGGCCACACACTTCACAGC +
Preference number: 4 (lower is better)
Translates to: IRVLFVGRGDGDAQATPEQHACR*GHTLHS
Trigger: GCTGTGAAGTGTGTGGCCGCACCTACAAGCATGCTG...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp ACTATCCTGTCCTTCCCAGTCAAGCTCTGGGCAAGGGCATACCATTTCAGGGACGAACTGTCGAGGGTCTaGATGGATGCGCCGGTGGTT +
Preference number: 4 (lower is better)
Translates to: TILSFPVKLWARAYHFRDELSRV*MDAPVV
Trigger: AACCACCGGCGCATCCATGCAGACCCTCGACAGTTC...GTCCCTGAAATGGTATGCCCTTGCCCAGAGCTTGACTGGGAAGGACAGGATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp TGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCGTTGGCAGTAGGCCTTaGCACACTGGCTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: WQSLALENHGDKGLGRRSVGSRP*HTGCSS
Trigger: ACTGCTGCAGCCAGTGTGGCAAGGCCTACTGCCAAC...GGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATAGGAGGACCCACCTCTaGCATCCCAGCCTGTGGACC +
Preference number: 4 (lower is better)
Translates to: GENLALSAFWQSLALENHRRTHL*HPSLWT
Trigger: GGTCCACAGGCTGGGATGGCAGAGGTGGGTCCTCCT...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp CTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATGGCCACTCTTCCTGGTaGTGCTGCTGGTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: LGENLALSAFWQSLALENGHSSW*CCWCRR
Trigger: TCTGCGACACCAGCAGCAGCACCAGGAAGAGTGGCC...ATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCGGCCACTCTTCCTGGTaGTGCTGCTGGTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLGHSSW*CCWCRR
Trigger: TCTGCGACACCAGCAGCAGCACCAGGAAGAGTGGCC...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCGGCTCAGTGGGCTCCTaGGCCTCTGTGAAGTTCACT +
Preference number: 4 (lower is better)
Translates to: WQSLALENHGDKGLGRRSGSVGS*ASVKFT
Trigger: AGTGAACTTCACAGAGGCCCAGGAGCCCACTGAGCC...GGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR CCA 90 bp CTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATGGTCCAGGCTGGCAGTaGGGACCTCGTCCACTTTTG +
Preference number: 4 (lower is better)
Translates to: LGENLALSAFWQSLALENGPGWQ*GPRPLL
Trigger: CAAAAGTGGACGAGGTCCCCACTGCCAGCCTGGACC...ATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGACGATGGTCCAGGCTaGCAGTGGGGACCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LALSAFWQSLALENHGDKDDGPG*QWGPRP
Trigger: TGGACGAGGTCCCCACTGCCAGCCTGGACCATCGTC...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCCAATGTACCCGCACATaGTTGCGCAGAGCCATAAGG +
Preference number: 4 (lower is better)
Translates to: SHQWFSLICLSLGENLALQCTRT*LRRAIR
Trigger: CCTTATGGCTCTGCGCAACCATGTGCGGGTACATTG...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTTGTTCCTCATCTCCGTaGAATGCTGCTTCCATTCCC +
Preference number: 4 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPCSSSP*NAASIP
Trigger: GGGAATGGAAGCAGCATTCCACGGAGATGAGGAACA...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTGGGTGGCAGGACCTATaGCTCAACAGGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: WFSLICLSLGENLALSAFGWQDL*LNRPAA
Trigger: TGCTGCTGGCCTGTTGAGCCATAGGTCCTGCCACCC...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTGCAGGGGAGGACTATaGGTAGAGGCTGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SHQWFSLICLSLGENLALCRGGL*VEAVSA
Trigger: AGCAGAAACAGCCTCTACCCATAGTCCTCCCCTGCA...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCGCCTCTGCTGCATTCTaGGGCTCACTGCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLASAAF*GSLQPP
Trigger: AGGAGGCTGCAGTGAGCCCCAGAATGCAGCAGAGGC...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ACTATCCTGTCCTTCCCAGTCAAGCTCTGGGCAAGGGCATACCATTTCAGGGACGGCCTCCCTGGCCACTaGCTACCTCTAGTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: TILSFPVKLWARAYHFRDGLPGH*LPLVWC
Trigger: ACACCAAACTAGAGGTAGCCAGTGGCCAGGGAGGCC...GTCCCTGAAATGGTATGCCCTTGCCCAGAGCTTGACTGGGAAGGACAGGATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGTCCCCACCTGCTGTGTaGATTCTGTGCCTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: IRVLFVGRGDGDAQATPESPPAV*ILCLLN
Trigger: GTTCAGGAGGCACAGAATCCACACAGCAGGTGGGGA...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCATGGTGTGGGCCTTCTaGTGGTTCAGCAGGCTACCG +
Preference number: 4 (lower is better)
Translates to: WQSLALENHGDKGLGRRSMVWAF*WFSRLP
Trigger: CGGTAGCCTGCTGAACCACCAGAAGGCCCACACCAT...GGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ACCGTGCCCAGCATCTTTCCCTCACCAAACCAACCAAGCCCAGGAGTCCTAGAAAGGGGTAGAGTCCAATaGTGTGGGCCTTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TVPSIFPSPNQPSPGVLERGRVQ*CGPSGG
Trigger: ACCACCAGAAGGCCCACACCATTGGACTCTACCCCT...TTCTAGGACTCCTGGGCTTGGTTGGTTTGGTGAGGGAAAGATGCTGGGCACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATGTGTGGGTCCGACTGTaGTTCTTGAGAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: RQLSHQWFSLICLSLGENVWVRL*FLRDSR
Trigger: CCTGCTGTCTCTCAAGAACCACAGTCGGACCCACAC...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCGCTTGGGGTCCGTGTaGGTCCGACTGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LGENLALSAFWQSLALENRLGSV*VRLWFL
Trigger: CAAGAACCACAGTCGGACCCACACGGACCCCAAGCG...ATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGCAGCTGTAGCGCTTaGGGTCCGTGTGGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGCSCSA*GPCGSD
Trigger: GTCGGACCCACACGGACCCCAAGCGCTACAGCTGCA...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTACTGGCCACTCTTCCTaGTGCTGCTGCTGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: WFSLICLSLGENLALSAFTGHSS*CCCWCR
Trigger: GCGACACCAGCAGCAGCACCAGGAAGAGTGGCCAGT...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATAGGTCTGCAGGCCACTaGGGTGAGGGGTTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: GENLALSAFWQSLALENHRSAGH*GEGFGS
Trigger: GCTTCCGAACCCCTCACCCCAGTGGCCTGCAGACCT...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR TCA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGGTCAGAGCAACTGAATaGGAGGGGCATGTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: IRVLFVGRGDGDAQATPEVRATE*EGHVLH
Trigger: ATGGAGGACATGCCCCTCTCATTCAGTTGCTCTGAC...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR TCA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATGTCTCATGGTTCCTCTaGTGGTTGGCCAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: RQLSHQWFSLICLSLGENVSWFL*WLAKFS
Trigger: GGAGAACTTGGCCAACCATCAGAGGAACCATGAGAC...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR TCA 90 bp ACCGTGCCCAGCATCTTTCCCTCACCAAACCAACCAAGCCCAGGAGTCCTAGAAGTTAATAAGGCTGCCTaGGTGGCGATAGCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: TVPSIFPSPNQPSPGVLEVNKAA*VAIALA
Trigger: GGCAAGAGCTATCGCCACTCAGGCAGCCTTATTAAC...TTCTAGGACTCCTGGGCTTGGTTGGTTTGGTGAGGGAAAGATGCTGGGCACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp CTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATGAGGTGACCTCAGTCTaGCAGCCTGTCTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: LGENLALSAFWQSLALENEVTSV*QPVSNS
Trigger: GGAGTTGGAGACAGGCTGTCAGACTGAGGTCACCTC...ATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGATTCTGTGCCTCCTaGACACGCTGGGCTACTGGG +
Preference number: 4 (lower is better)
Translates to: GENLALSAFWQSLALENHGFCAS*TRWATG
Trigger: CCCAGTAGCCCAGCGTGTTCAGGAGGCACAGAATCC...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATTGGCTCTCAGAGAGGTaGCAAGGATTCCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: RQLSHQWFSLICLSLGENWLSER*QGFLET
Trigger: TGTCTCCAGGAATCCTTGTCACCTCTCTGAGAGCCA...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCGCCGGGCAGCGGTTCTaGAAGCCTTGCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFAGQRF*KPCHRC
Trigger: ACATCTGTGGCAAGGCTTTCAGAACCGCTGCCCGGC...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATTGGCGCAGTTCTCGATaGCGTGCCAGTTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GENLALSAFWQSLALENHWRSSR*RASSGR
Trigger: CCTCCCAGAACTGGCACGGCATCGAGAACTGCGCCA...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR GCA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCCACTATCTTGCTTCTaGCGCCTTCTGTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: RQLSHQWFSLICLSLGENPLSCF*RLLFHC
Trigger: GCAGTGGAACAGAAGGCGGCAGAAGCAAGATAGTGG...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp AGCCTCTCCCTGCCTGCCCCATCCTTCAGTCAACTGTTCTTTGGAGACCTGTCACCTCTAGATCCAGCCTaGAAACAGTCCCCATCCCTT +
Preference number: 4 (lower is better)
Translates to: SLSLPAPSFSQLFFGDLSPLDPA*KQSPSL
Trigger: AAGGGATGGGGACTGTTTGCAGGCTGGATCTAGAGG...TGACAGGTCTCCAAAGAACAGTTGACTGAAGGATGGGGCAGGCAGGGAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp AGCCTCTCCCTGCCTGCCCCATCCTTCAGTCAACTGTTCTTTGGAGACCTGTCACATGCAAAGGCTGTCTaGAACTGTGCCACCTACTCC +
Preference number: 4 (lower is better)
Translates to: SLSLPAPSFSQLFFGDLSHAKAV*NCATYS
Trigger: GGAGTAGGTGGCACAGTTGCAGACAGCCTTTGCATG...TGACAGGTCTCCAAAGAACAGTTGACTGAAGGATGGGGCAGGCAGGGAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCATGCAAAGGCTGTCTaGAACTGTGCCACCTACTCC +
Preference number: 4 (lower is better)
Translates to: RQLSHQWFSLICLSLGENHAKAV*NCATYS
Trigger: GGAGTAGGTGGCACAGTTGCAGACAGCCTTTGCATG...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTATGACAGCCTGCTCCTaGCCTGCCTCTGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: WFSLICLSLGENLALSAFMTACS*PASAAF
Trigger: GAATGCAGCAGAGGCAGGGCAGGAGCAGGCTGTCAT...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCGGTTTCCATGGCATGTaGAGGCCCGTGCCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFGFHGM*RPVPSV
Trigger: CACCGAAGGCACGGGCCTCCACATGCCATGGAAACC...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR CCA 90 bp TTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGAGAGGAGGAGTCAGAGTaGCAGATGCCCCTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: FWQSLALENHGDKGLGRREEESE*QMPLFR
Trigger: CCGGAAGAGGGGCATCTGCCACTCTGACTCCTCCTC...TCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAATCAGCGTCAGCAGGGTaGGAGGAGGAGTCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LALSAFWQSLALENHGDKSASAG*EEESEW
Trigger: CCACTCTGACTCCTCCTCCCACCCTGCTGACGCTGA...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTGGGTGGCAGGACCTATaGCTCAACAGGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGGWQDL*LNRPAA
Trigger: TGCTGCTGGCCTGTTGAGCCATAGGTCCTGCCACCC...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATGCCTCTGCTGCATTCTaGGGCTCACTGCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FGRVWPWKIMVTKGWEGDASAAF*GSLQPP
Trigger: AGGAGGCTGCAGTGAGCCCCAGAATGCAGCAGAGGC...ATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCCCTTCTGTAGCATGTTaGCCTCCCTGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLPSVAC*PPWPLA
Trigger: AGCCAGTGGCCAGGGAGGCCAACATGCTACAGAAGG...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ACTATCCTGTCCTTCCCAGTCAAGCTCTGGGCAAGGGCATACCATTTCAGGGACGCAGCAGTGGCTTTCTaGTTGGAGTTGAGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: TILSFPVKLWARAYHFRDAAVAF*LELRAA
Trigger: AGCGGCTCTCAACTCCAACCAGAAAGCCACTGCTGC...GTCCCTGAAATGGTATGCCCTTGCCCAGAGCTTGACTGGGAAGGACAGGATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGTGCCATCCCAGCCTGTaGACCTCTGGTCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLICLSLGENLALSAFWQCHPSL*TSGLLH
Trigger: ATGGAGAAGACCAGAGGTCCACAGGCTGGGATGGCA...CTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGGGGTAGAGTCCAATaGTGTGGGCCTTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SLICLSLGENLALSAFWQRGRVQ*CGPSGG
Trigger: ACCACCAGAAGGCCCACACCATTGGACTCTACCCCT...CTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ACTATCCTGTCCTTCCCAGTCAAGCTCTGGGCAAGGGCATACCATTTCAGGGACGTGTGGGTCCGACTGTaGTTCTTGAGAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: TILSFPVKLWARAYHFRDVWVRL*FLRDSR
Trigger: CCTGCTGTCTCTCAAGAACCACAGTCGGACCCACAC...GTCCCTGAAATGGTATGCCCTTGCCCAGAGCTTGACTGGGAAGGACAGGATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGACGCTTGGGGTCCGTGTaGGTCCGACTGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: FWQSLALENHGDKGLGRRRLGSV*VRLWFL
Trigger: CAAGAACCACAGTCGGACCCACACGGACCCCAAGCG...TCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAACTGGCCACTCTTCCTaGTGCTGCTGCTGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: LALSAFWQSLALENHGDKTGHSS*CCCWCR
Trigger: GCGACACCAGCAGCAGCACCAGGAAGAGTGGCCAGT...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR CAA 72 bp TCTCCCTGCCTGCCCCATCCTTCAGTCAACTGTTCTTaGGAGACCTGTCATTCAGAGGGAGAGACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SPCLPHPSVNCS*ETCHSEGETEV
Trigger: GACCTCAGTCTCTCCCTCTGAATGACAGGTCTCCAAAGAACAGTTGACTGAAGGATGGGGCAGGCAGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGACCCTCATGGGACTGCTaGTGTTCCAGCAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: FWQSLALENHGDKGLGRRPSWDC*CSSRSL
Trigger: CAGGGATCTGCTGGAACATCAGCAGTCCCATGAGGG...TCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCCTTGACAGGGCTGGGTaGACCTTCAGTCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFLDRAG*TFSPWI
Trigger: GATCCAGGGACTGAAGGTTCACCCAGCCCTGTCAAG...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp CTGCTGGTGCCACTGAGGCTCCTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCGATGTTCGAGACTTTTaGGATCTTCAAACAACATTC +
Preference number: 4 (lower is better)
Translates to: LLVPLRLLRREGEDTEGGDVRDF*DLQTTF
Trigger: GAATGTTGTTTGAAGATCTCAAAAGTCTCGAACATC...GCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAGGAGCCTCAGTGGCACCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGCACTGGTGGTTCATaGGACTGCCAGCATGGCGGT +
Preference number: 4 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGCTGGS*DCQHGG
Trigger: ACCGCCATGCTGGCAGTCTCATGAACCACCAGTGCA...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCGCTTCCTCCCCGTCCTaGTTAGCAGATGAATGGCGC +
Preference number: 4 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFASSPS*LADEWR
Trigger: GCGCCATTCATCTGCTAAGCAGGACGGGGAGGAAGC...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR GCA 90 bp ACTATCCTGTCCTTCCCAGTCAAGCTCTGGGCAAGGGCATACCATTTCAGGGACGCCATGGTATGGAAATaGTTGGCACAGGCCCCACAA +
Preference number: 4 (lower is better)
Translates to: TILSFPVKLWARAYHFRDAMVWK*LAQAPQ
Trigger: TTGTGGGGCCTGTGCCAAGCATTTCCATACCATGGC...GTCCCTGAAATGGTATGCCCTTGCCCAGAGCTTGACTGGGAAGGACAGGATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTGGCTGTCTGCAACTGTaGCACCTACTCCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: WFSLICLSLGENLALSAFGCLQL*HLLPLQ
Trigger: CTGAAGAGGGAGTAGGTGGCACAGTTGCAGACAGCC...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCGGTGGTTTACCAAGCTaGCTCCGTGGCGATAGGTCT +
Preference number: 4 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLGGLPS*LRGDRS
Trigger: AGACCTATCGCCACGGAGGCAGCTTGGTAAACCACC...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp AGTTACAGTTCTCAGGAACCATCACCACTATCCTGTCCTTCCCAGTCAAGCTCTCTGCCCTGCCTCTGCTaGATTCTGGGGCTCACTGCA +
Preference number: 4 (lower is better)
Translates to: SYSSQEPSPLSCPSQSSSLPCLC*ILGLTA
Trigger: TGCAGTGAGCCCCAGAATGCAGCAGAGGCAGGGCAG...AGAGCTTGACTGGGAAGGACAGGATAGTGGTGATGGTTCCTGAGAACTGTAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GTTACAGTTCTCAGGAACCATCACCACTATCCTGTCCTTCCCAGTCAAGCTCTGATGACAGCCTGCTCCTaGCCTGCCTCTGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: VTVLRNHHHYPVLPSQALMTACS*PASAAF
Trigger: GAATGCAGCAGAGGCAGGGCAGGAGCAGGCTGTCAT...CAGAGCTTGACTGGGAAGGACAGGATAGTGGTGATGGTTCCTGAGAACTGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGAACTGTCGAGGGTCTaGATGGATGCGCCGGTGGTT +
Preference number: 4 (lower is better)
Translates to: GENLALSAFWQSLALENHELSRV*MDAPVV
Trigger: AACCACCGGCGCATCCATGCAGACCCTCGACAGTTC...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTAGAGTCAGTTTCTGGGTaGCCCTACTCCTGCGTCGCT +
Preference number: 4 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLESVSG*PYSCVA
Trigger: AGCGACGCAGGAGTAGGGGCACCCAGAAACTGACTC...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTAGGTACAACGTACAGCTaGTGCCCTCTGGGGACATCC +
Preference number: 4 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLGTTYS*CPLGTS
Trigger: GGATGTCCCCAGAGGGCAGCAGCTGTACGTTGTACC...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCGCTGTGTGGATTCTGTaGCTCCTGAACACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFAVWIL*LLNTLG
Trigger: GCCCAGCGTGTTCAGGAGGCACAGAATCCACACAGC...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp CTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCCTTGCCACAGATGTTaGAGCTGTAGCGCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LGENLALSAFWQSLALENPCHRC*SCSAWG
Trigger: ACCCCAAGCGCTACAGCTGCAACATCTGTGGCAAGG...ATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCCACTCTTCCTGGTGCTaGTGCTGGTGTCGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLHSSWC*CWCRRK
Trigger: CTTTCTGCGACACCAGCAGCAGCACCAGGAAGAGTG...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTAGGTTGCTCGCTGGAGTaGGGAGTGGTGATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLGCSLE*GVVMLL
Trigger: AAGGAGCATCACCACTCCCCACTCCAGCGAGCAACC...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR CCA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTGGCCGATACTGGGCATaGAGTCTCGAGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: WFSLICLSLGENLALSAFGRYWA*SLEWFF
Trigger: GAAGAACCACTCGAGACTCCATGCCCAGTATCGGCC...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGTCTCCCAAAGGATCTTaGGAAGAATCTGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: IRVLFVGRGDGDAQATPESPKGS*EESGSS
Trigger: CGAGGACCCAGATTCTTCCCAAGATCCTTTGGGAGA...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ACCGTGCCCAGCATCTTTCCCTCACCAAACCAACCAAGCCCAGGAGTCCTAGAATCTCCCAAAGGATCTTaGGAAGAATCTGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: TVPSIFPSPNQPSPGVLESPKGS*EESGSS
Trigger: CGAGGACCCAGATTCTTCCCAAGATCCTTTGGGAGA...TTCTAGGACTCCTGGGCTTGGTTGGTTTGGTGAGGGAAAGATGCTGGGCACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGTAGGCAGCCAGATTaGGGTAGCAGCGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: LALSAFWQSLALENHGDKGRQPD*GSSGNR
Trigger: TCTGTTCCCGCTGCTACCCCAATCTGGCTGCCTACC...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTAGGCAGCCAGATTaGGGTAGCAGCGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: GENLALSAFWQSLALENHGRQPD*GSSGNR
Trigger: TCTGTTCCCGCTGCTACCCCAATCTGGCTGCCTACC...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGAGATGGGCCCCATTTaGGGCTCTGAGCCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LALSAFWQSLALENHGDKEMGPI*GSEPLQ
Trigger: CTGCAAAGGCTCAGAGCCCCAAATGGGGCCCATCTC...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GTTACAGTTCTCAGGAACCATCACCACTATCCTGTCCTTCCCAGTCAAGCTCTGGAGATGGGCCCCATTTaGGGCTCTGAGCCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: VTVLRNHHHYPVLPSQALEMGPI*GSEPLQ
Trigger: CTGCAAAGGCTCAGAGCCCCAAATGGGGCCCATCTC...CAGAGCTTGACTGGGAAGGACAGGATAGTGGTGATGGTTCCTGAGAACTGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTGGTTTGAGAAACCCTTaGAGCAGGCCTGGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: WFSLICLSLGENLALSAFGLRNP*SRPGSQ
Trigger: TTGGCTGCCAGGCCTGCTCCAAGGGTTTCTCAAACC...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTGCATGGATGCGCCGGTaGTTCTTGAGTGACATGAGG +
Preference number: 4 (lower is better)
Translates to: WFSLICLSLGENLALSAFAWMRR*FLSDMR
Trigger: CCTCATGTCACTCAAGAACCACCGGCGCATCCATGC...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGTGACAAAGGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAATGTCGAGGGTCTGCATaGATGCGCCGGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GDKGLGRRSFILHGHRHECRGSA*MRRWFL
Trigger: CAAGAACCACCGGCGCATCCATGCAGACCCTCGACA...TTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCCTTTGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTGCATGTTGGCCTCCCTaGCCACTGGCTACCTCTAGT +
Preference number: 4 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGACWPP*PLATSS
Trigger: ACTAGAGGTAGCCAGTGGCCAGGGAGGCCAACATGC...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTAACACGCTGGGCTACTaGGACTCTGACTGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGNTLGY*DSDCVP
Trigger: GGGGACACAGTCAGAGTCCCAGTAGCCCAGCGTGTT...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAAACACGCTGGGCTACTaGGACTCTGACTGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LALSAFWQSLALENHGDKNTLGY*DSDCVP
Trigger: GGGGACACAGTCAGAGTCCCAGTAGCCCAGCGTGTT...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGGTGGCCAGTTCACTGTaGGACTCACACACTTTGCTA +
Preference number: 4 (lower is better)
Translates to: IRVLFVGRGDGDAQATPEVASSL*DSHTLL
Trigger: TAGCAAAGTGTGTGAGTCCCACAGTGAACTGGCCAC...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp AGTTACAGTTCTCAGGAACCATCACCACTATCCTGTCCTTCCCAGTCAAGCTCTGTGAATGGTCCCTCCTaGGGTGCATGGACCCGTCCA +
Preference number: 4 (lower is better)
Translates to: SYSSQEPSPLSCPSQSSSVNGPS*GAWTRP
Trigger: TGGACGGGTCCATGCACCCCAGGAGGGACCATTCAC...AGAGCTTGACTGGGAAGGACAGGATAGTGGTGATGGTTCCTGAGAACTGTAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTAGAAAGCTGATTCGGTaGCGGAAGCGGCGAGGACAA +
Preference number: 4 (lower is better)
Translates to: WFSLICLSLGENLALSAFRKLIR*RKRRGQ
Trigger: TTGTCCTCGCCGCTTCCGCCACCGAATCAGCTTTCT...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR CAA 72 bp CATGGGCACAGACATGAAGACTACCTCATGCCCTTCTaGGGGGAAAAAGCCAGATTAGGGTCCTCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: HGHRHEDYLMPF*GEKARLGSSSW
Trigger: CCACGAAGAGGACCCTAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATGGCTCTCAGGAGCATaGGTCCTCATATGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FWQSLALENHGDKGLGRRWLSGA*VLIWLW
Trigger: CCAGAGCCATATGAGGACTCATGCTCCTGAGAGCCA...TCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR TCA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTCGTACCAACTTCGTCTaGTTTTCCCAGCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: WFSLICLSLGENLALSAFRTNFV*FSQPSP
Trigger: TGGGGAAGGCTGGGAAAATCAGACGAAGTTGGTACG...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR TCA 90 bp TGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCCTGAAGTCTCCTGTCTaGTGGGTCTGCCTATGGTTA +
Preference number: 4 (lower is better)
Translates to: WQSLALENHGDKGLGRRSLKSPV*WVCLWL
Trigger: TAACCATAGGCAGACCCATCAGACAGGAGACTTCAG...GGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCACCTCACGCTGCAGTTaGTTCAGCAGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLTSRCS*FSSSAS
Trigger: AGAAGCAGAGCTGCTGAATCAACTGCAGCGTGAGGT...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGGTGCCCTCAAAGCCATaGTCTGCAACCATTTCTGTT +
Preference number: 4 (lower is better)
Translates to: IRVLFVGRGDGDAQATPEVPSKP*SATISV
Trigger: AACAGAAATGGTTGCAGATCATGGCTTTGAGGGCAC...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATCCCACACTTCTTCTTTaGCACCTGCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GENLALSAFWQSLALENHPTLLL*HLPAPP
Trigger: TGGAGGAGCTGGCAGGTGTCAAAGAAGAAGTGTGGG...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp AGTTACAGTTCTCAGGAACCATCACCACTATCCTGTCCTTCCCAGTCAAGCTCTGAGGTGACCTCAGTCTaGCAGCCTGTCTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: SYSSQEPSPLSCPSQSSSEVTSV*QPVSNS
Trigger: GGAGTTGGAGACAGGCTGTCAGACTGAGGTCACCTC...AGAGCTTGACTGGGAAGGACAGGATAGTGGTGATGGTTCCTGAGAACTGTAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGTCAGAATGTACCCTCTaGTGGTCTTTCAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SLICLSLGENLALSAFWQSECTL*WSFRAV
Trigger: CACAGCCCTGAAAGACCATCAGAGGGTACATTCTGA...CTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCACAACATTCCACAAATaGTACACACCTGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: SHQWFSLICLSLGENLALTTFHK*YTPVAL
Trigger: CAGTGCCACAGGTGTGTAGCATTTGTGGAATGTTGT...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp ACCGTGCCCAGCATCTTTCCCTCACCAAACCAACCAAGCCCAGGAGTCCTAGAACTAGTCCTTCCTCAGTaGCCTCTTTATCACCCAGAA +
Preference number: 4 (lower is better)
Translates to: TVPSIFPSPNQPSPGVLELVLPQ*PLYHPE
Trigger: TTCTGGGTGATAAAGAGGGCACTGAGGAAGGACTAG...TTCTAGGACTCCTGGGCTTGGTTGGTTTGGTGAGGGAAAGATGCTGGGCACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp ACTATCCTGTCCTTCCCAGTCAAGCTCTGGGCAAGGGCATACCATTTCAGGGACTTTCACCAGCCTGCATaGAAAGGCTGTCTGCAACTG +
Preference number: 4 (lower is better)
Translates to: TILSFPVKLWARAYHFRDFHQPA*KGCLQL
Trigger: CAGTTGCAGACAGCCTTTGCATGCAGGCTGGTGAAA...GTCCCTGAAATGGTATGCCCTTGCCCAGAGCTTGACTGGGAAGGACAGGATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp TGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCCGTGGCGATAGGTCTTaGCACACTGGTTACATTGGA +
Preference number: 4 (lower is better)
Translates to: WQSLALENHGDKGLGRRSRGDRS*HTGYIG
Trigger: TCCAATGTAACCAGTGTGGCAAGACCTATCGCCACG...GGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGTGACAAAGGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGGTGGTTTACCAAGCTaGCTCCGTGGCGATAGGTCT +
Preference number: 4 (lower is better)
Translates to: GDKGLGRRSFILHGHRHEGGLPS*LRGDRS
Trigger: AGACCTATCGCCACGGAGGCAGCTTGGTAAACCACC...TTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCCTTTGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GTTACAGTTCTCAGGAACCATCACCACTATCCTGTCCTTCCCAGTCAAGCTCTGCATTCTGGGGCTCACTaGAGCCTCCTGCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: VTVLRNHHHYPVLPSQALHSGAH*SLLLLR
Trigger: TCTCAGAAGCAGGAGGCTGCAGTGAGCCCCAGAATG...CAGAGCTTGACTGGGAAGGACAGGATAGTGGTGATGGTTCCTGAGAACTGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTACAGTACCATCTGACCTaGCCTCCAGTCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLQYHLT*PPVPSH
Trigger: ATGACTGGGGACTGGAGGGCAGGTCAGATGGTACTG...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTCCTTGCCACAGATGTTaGAGCTGTAGCGCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGPCHRC*SCSAWG
Trigger: ACCCCAAGCGCTACAGCTGCAACATCTGTGGCAAGG...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTGGTTCCTCTGATGGTTaGCCAAGTTCTCCGGGTGAC +
Preference number: 4 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGGSSDG*PSSPGD
Trigger: GTCACCCGGAGAACTTGGCCAACCATCAGAGGAACC...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR CCA 90 bp CTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCAATGTACCCGCACATaGTTGCGCAGAGCCATAAGG +
Preference number: 4 (lower is better)
Translates to: LGENLALSAFWQSLALENQCTRT*LRRAIR
Trigger: CCTTATGGCTCTGCGCAACCATGTGCGGGTACATTG...ATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGACCACACTGGTTACATTaGAAAGGGCGAGGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: FWQSLALENHGDKGLGRRPHWLH*KGRGWD
Trigger: GTCCCACCCTCGCCCTTTCCAATGTAACCAGTGTGG...TCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGTGACAAAGGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAACCACACTGGTTACATTaGAAAGGGCGAGGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: GDKGLGRRSFILHGHRHEPHWLH*KGRGWD
Trigger: GTCCCACCCTCGCCCTTTCCAATGTAACCAGTGTGG...TTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCCTTTGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCAAATCACCTGTCTGGTaGATCTTTCGGTGGTTTACC +
Preference number: 4 (lower is better)
Translates to: SHQWFSLICLSLGENLALKSPVW*IFRWFT
Trigger: GGTAAACCACCGAAAGATCCACCAGACAGGTGATTT...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTAGGTTTGAGAAACCCTTaGAGCAGGCCTGGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLGLRNP*SRPGSQ
Trigger: TTGGCTGCCAGGCCTGCTCCAAGGGTTTCTCAAACC...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGCATGGATGCGCCGGTaGTTCTTGAGTGACATGAGG +
Preference number: 4 (lower is better)
Translates to: LALSAFWQSLALENHGDKAWMRR*FLSDMR
Trigger: CCTCATGTCACTCAAGAACCACCGGCGCATCCATGC...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGGGTGACAAGGATTCCTaGAGACAGTGTCTTCCAACT +
Preference number: 4 (lower is better)
Translates to: IRVLFVGRGDGDAQATPEGDKDS*RQCLPT
Trigger: AGTTGGAAGACACTGTCTCCAGGAATCCTTGTCACC...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATGCAGCAGTGGCTTTCTaGTTGGAGTTGAGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: FGRVWPWKIMVTKGWEGDAAVAF*LELRAA
Trigger: AGCGGCTCTCAACTCCAACCAGAAAGCCACTGCTGC...ATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCGCAGTAGTGTGGTTGTaGATCTCAGTGGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: WQSLALENHGDKGLGRRSAVVWL*ISVVTG
Trigger: TCCTGTGACCACTGAGATCCACAACCACACTACTGC...GGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGACGCTGGGCAGTAGTGTaGTTGTGGATCTCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: FWQSLALENHGDKGLGRRRWAVV*LWISVV
Trigger: GACCACTGAGATCCACAACCACACTACTGCCCAGCG...TCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTACGCTGGGCAGTAGTGTaGTTGTGGATCTCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLRWAVV*LWISVV
Trigger: GACCACTGAGATCCACAACCACACTACTGCCCAGCG...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ACTATCCTGTCCTTCCCAGTCAAGCTCTGGGCAAGGGCATACCATTTCAGGGACGTGGCCAGTTCACTGTaGGACTCACACACTTTGCTA +
Preference number: 4 (lower is better)
Translates to: TILSFPVKLWARAYHFRDVASSL*DSHTLL
Trigger: TAGCAAAGTGTGTGAGTCCCACAGTGAACTGGCCAC...GTCCCTGAAATGGTATGCCCTTGCCCAGAGCTTGACTGGGAAGGACAGGATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATAGAAAGCTGATTCGGTaGCGGAAGCGGCGAGGACAA +
Preference number: 4 (lower is better)
Translates to: FGRVWPWKIMVTKGWEGDRKLIR*RKRRGQ
Trigger: TTGTCCTCGCCGCTTCCGCCACCGAATCAGCTTTCT...ATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCGCTCCTGGGCCTCTGTaGAGTTCACTACTGATTCAG +
Preference number: 4 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFAPGPL*SSLLIQ
Trigger: CTGAATCAGTAGTGAACTTCACAGAGGCCCAGGAGC...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR TCA 90 bp CTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCTGAAGTCTCCTGTCTaGTGGGTCTGCCTATGGTTA +
Preference number: 4 (lower is better)
Translates to: LGENLALSAFWQSLALENLKSPV*WVCLWL
Trigger: TAACCATAGGCAGACCCATCAGACAGGAGACTTCAG...ATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGGTGCCCTCAAAGCCATaGTCTGCAACCATTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SLICLSLGENLALSAFWQVPSKP*SATISV
Trigger: AACAGAAATGGTTGCAGATCATGGCTTTGAGGGCAC...CTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATTGTCCTCTGTCTCCTTaGCTCCCATCTACTTTCCCC +
Preference number: 4 (lower is better)
Translates to: GENLALSAFWQSLALENHCPLSP*LPSTFP
Trigger: GGGGAAAGTAGATGGGAGTCAAGGAGACAGAGGACA...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTATGGCTCTCAGAGAGGTaGCAAGGATTCCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLWLSER*QGFLET
Trigger: TGTCTCCAGGAATCCTTGTCACCTCTCTGAGAGCCA...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAACCACTATCTTGCTTCTaGCGCCTTCTGTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: LALSAFWQSLALENHGDKPLSCF*RLLFHC
Trigger: GCAGTGGAACAGAAGGCGGCAGAAGCAAGATAGTGG...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCCCTGTACCACTATCTTaGTTCTGCCGCCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLPVPLS*FCRLLF
Trigger: GAACAGAAGGCGGCAGAAGCAAGATAGTGGTACAGG...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTCCTGTCTCCAACTCCTaGTCCAGCTCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGPVSNS*SSSSSF
Trigger: AAAGGAAGAGGAGCTGGAGCAGGAGTTGGAGACAGG...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCCCTGTCTCCAACTCCTaGTCCAGCTCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFPVSNS*SSSSSF
Trigger: AAAGGAAGAGGAGCTGGAGCAGGAGTTGGAGACAGG...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGCTCCTTGTCTTCAGCTaGTGGGAAATGTATTCCTTG +
Preference number: 4 (lower is better)
Translates to: IRVLFVGRGDGDAQATPELLVFS*WEMYSL
Trigger: CAAGGAATACATTTCCCAGCAGCTGAAGACAAGGAG...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGTGACAAAGGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAATCGCAGCCATGGTATaGAAATGCTTGGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: GDKGLGRRSFILHGHRHEIAAMV*KCLAQA
Trigger: GGCCTGTGCCAAGCATTTCCATACCATGGCTGCGAT...TTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCCTTTGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCGCATTGATAGATGCCTaGAGGGTGGCAGGACCTATG +
Preference number: 4 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFALIDA*RVAGPM
Trigger: CATAGGTCCTGCCACCCTCCAGGCATCTATCAATGC...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCTGCAGGGGAGGACTATaGGTAGAGGCTGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFCRGGL*VEAVSA
Trigger: AGCAGAAACAGCCTCTACCCATAGTCCTCCCCTGCA...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATTGGAAAGGGCGAGGGTaGGACTCCAGAAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: FGRVWPWKIMVTKGWEGDWKGRG*DSRKLS
Trigger: TGAAAGCTTTCTGGAGTCCCACCCTCGCCCTTTCCA...ATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATGGTGGATCTTTCGGTaGTTTACCAAGCTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: FWQSLALENHGDKGLGRRWWIFR*FTKLPP
Trigger: CGGAGGCAGCTTGGTAAACCACCGAAAGATCCACCA...TCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp AGCCTCTCCCTGCCTGCCCCATCCTTCAGTCAACTGTTCTTTGGAGACCTGTCAGGTTGTGGATCTCAGTaGTCACAGGATTCAAGAACT +
Preference number: 4 (lower is better)
Translates to: SLSLPAPSFSQLFFGDLSGCGSQ*SQDSRT
Trigger: AGTTCTTGAATCCTGTGACCACTGAGATCCACAACC...TGACAGGTCTCCAAAGAACAGTTGACTGAAGGATGGGGCAGGCAGGGAGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp AGCCTCTCCCTGCCTGCCCCATCCTTCAGTCAACTGTTCTTTGGAGACCTGTCACTTGTCTTCAGCTGCTaGGAAATGTATTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SLSLPAPSFSQLFFGDLSLVFSC*EMYSLS
Trigger: GGACAAGGAATACATTTCCCAGCAGCTGAAGACAAG...TGACAGGTCTCCAAAGAACAGTTGACTGAAGGATGGGGCAGGCAGGGAGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR CAA 72 bp CAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTaGGGAAGGAGATCCTTCATCCTTCATGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: QSLALENHGDKG*GRRSFILHGHR
Trigger: TCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTCCTGTTTTAGATAGCTaGCCCCAACTCCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: WFSLICLSLGENLALSAFPVLDS*PQLLSS
Trigger: AGATGAGAGGAGTTGGGGTCAGCTATCTAAAACAGG...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTCATGTTGTTCTTTCTTaGCAGGGCTGGGTGAACCTT +
Preference number: 4 (lower is better)
Translates to: WFSLICLSLGENLALSAFHVVLS*QGWVNL
Trigger: AAGGTTCACCCAGCCCTGTCAAGAAAGAACAACATG...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCCATGTTGTTCTTTCTTaGCAGGGCTGGGTGAACCTT +
Preference number: 4 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLHVVLS*QGWVNL
Trigger: AAGGTTCACCCAGCCCTGTCAAGAAAGAACAACATG...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp ACAGTTTTCTCTCTAGATGTGGAAGATGAGCTTACAGCCCCATGCCTCCACATCACCTCACGCTGCAGTTaGTTCAGCAGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TVFSLDVEDELTAPCLHITSRCS*FSSSAS
Trigger: AGAAGCAGAGCTGCTGAATCAACTGCAGCGTGAGGT...GATGTGGAGGCATGGGGCTGTAAGCTCATCTTCCACATCTAGAGAGAAAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTAATCTCCGTGGAATGCTaGTTCCATTCCCACTGGATC +
Preference number: 4 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLISVEC*FHSHWI
Trigger: GATCCAGTGGGAATGGAAGCAGCATTCCACGGAGAT...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp TCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGACAACATTCCACAAATaGTACACACCTGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: SLICLSLGENLALSAFWQTTFHK*YTPVAL
Trigger: CAGTGCCACAGGTGTGTAGCATTTGTGGAATGTTGT...CTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTAGTGGCGATAGCTCTTaGCACAGTCTTGGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGSGDSS*HSLGKQ
Trigger: TTGCTTGCCAAGACTGTGGCAAGAGCTATCGCCACT...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCAGTGGCGATAGCTCTTaGCACAGTCTTGGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFSGDSS*HSLGKQ
Trigger: TTGCTTGCCAAGACTGTGGCAAGAGCTATCGCCACT...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATCCTGTACCACTATCTTaGTTCTGCCGCCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: GENLALSAFWQSLALENHPVPLS*FCRLLF
Trigger: GAACAGAAGGCGGCAGAAGCAAGATAGTGGTACAGG...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp TTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATTTCACCAGCCTGCATaGAAAGGCTGTCTGCAACTG +
Preference number: 4 (lower is better)
Translates to: FWQSLALENHGDKGLGRRFHQPA*KGCLQL
Trigger: CAGTTGCAGACAGCCTTTGCATGCAGGCTGGTGAAA...TCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTACGTGGCGATAGGTCTTaGCACACTGGTTACATTGGA +
Preference number: 4 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLRGDRS*HTGYIG
Trigger: TCCAATGTAACCAGTGTGGCAAGACCTATCGCCACG...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGTGACAAAGGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAATCTACTTTCCCCACCTaGTGTGTGGATTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GDKGLGRRSFILHGHRHESTFPT*CVDSVP
Trigger: AGGCACAGAATCCACACAGCAGGTGGGGAAAGTAGA...TTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCCTTTGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTATCTACTTTCCCCACCTaGTGTGTGGATTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLSTFPT*CVDSVP
Trigger: AGGCACAGAATCCACACAGCAGGTGGGGAAAGTAGA...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp TGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCCAGTGTCTTCCAACTTaGCTTCTGGCTTGGTTAACT +
Preference number: 4 (lower is better)
Translates to: WQSLALENHGDKGLGRRSQCLPT*LLAWLT
Trigger: AGTTAACCAAGCCAGAAGGCAAGTTGGAAGACACTG...GGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGTCCTCATATGGCTCTaGAGGGCCAAGCGATTAGAA +
Preference number: 4 (lower is better)
Translates to: GENLALSAFWQSLALENHVLIWL*RAKRLE
Trigger: TTCTAATCGCTTGGCCCTCCAGAGCCATATGAGGAC...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR CCA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTGCTGCTTGGAACAAATaGAACAGGGGTAGATACCTG +
Preference number: 4 (lower is better)
Translates to: WFSLICLSLGENLALSAFAAWNK*NRGRYL
Trigger: CAGGTATCTACCCCTGTTCCATTTGTTCCAAGCAGC...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATAACAGGCCAGCAGCATaGGAGAAAGAATCTCCACAG +
Preference number: 4 (lower is better)
Translates to: FGRVWPWKIMVTKGWEGDNRPAA*EKESPQ
Trigger: CTGTGGAGATTCTTTCTCCCATGCTGCTGGCCTGTT...ATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTAAACAGGCCAGCAGCATaGGAGAAAGAATCTCCACAG +
Preference number: 4 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLNRPAA*EKESPQ
Trigger: CTGTGGAGATTCTTTCTCCCATGCTGCTGGCCTGTT...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp AGTTACAGTTCTCAGGAACCATCACCACTATCCTGTCCTTCCCAGTCAAGCTCTGCATTGATAGATGCCTaGAGGGTGGCAGGACCTATG +
Preference number: 4 (lower is better)
Translates to: SYSSQEPSPLSCPSQSSSALIDA*RVAGPM
Trigger: CATAGGTCCTGCCACCCTCCAGGCATCTATCAATGC...AGAGCTTGACTGGGAAGGACAGGATAGTGGTGATGGTTCCTGAGAACTGTAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTGGTGACAAGGATTCCTaGAGACAGTGTCTTCCAACT +
Preference number: 4 (lower is better)
Translates to: WFSLICLSLGENLALSAFGDKDS*RQCLPT
Trigger: AGTTGGAAGACACTGTCTCCAGGAATCCTTGTCACC...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGATTCAAGAACTCTTTaGAACAGAGCAGACAAATGT +
Preference number: 4 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPDSRTL*NRADKC
Trigger: ACATTTGTCTGCTCTGTTCCAAAGAGTTCTTGAATC...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGCAGTAGTGTGGTTGTaGATCTCAGTGGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: GENLALSAFWQSLALENHAVVWL*ISVVTG
Trigger: TCCTGTGACCACTGAGATCCACAACCACACTACTGC...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp TGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCCTTGTCTTCAGCTGCTaGGAAATGTATTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: WQSLALENHGDKGLGRRSLVFSC*EMYSLS
Trigger: GGACAAGGAATACATTTCCCAGCAGCTGAAGACAAG...GGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAACCTGTTTTAGATAGCTaGCCCCAACTCCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: LALSAFWQSLALENHGDKPVLDS*PQLLSS
Trigger: AGATGAGAGGAGTTGGGGTCAGCTATCTAAAACAGG...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp ACAGTTTTCTCTCTAGATGTGGAAGATGAGCTTACAGCCCCATGCCTCCACATCTCAGAATGTACCCTCTaGTGGTCTTTCAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TVFSLDVEDELTAPCLHISECTL*WSFRAV
Trigger: CACAGCCCTGAAAGACCATCAGAGGGTACATTCTGA...GATGTGGAGGCATGGGGCTGTAAGCTCATCTTCCACATCTAGAGAGAAAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCCAGAGCAGACAAATGTaGCAGTCTTTCCCATTAATG +
Preference number: 4 (lower is better)
Translates to: WQSLALENHGDKGLGRRSQSRQM*QSFPLM
Trigger: CATTAATGGGAAAGACTGTCACATTTGTCTGCTCTG...GGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp AGTTACAGTTCTCAGGAACCATCACCACTATCCTGTCCTTCCCAGTCAAGCTCTATCTCCGTGGAATGCTaGTTCCATTCCCACTGGATC +
Preference number: 4 (lower is better)
Translates to: SYSSQEPSPLSCPSQSSSISVEC*FHSHWI
Trigger: GATCCAGTGGGAATGGAAGCAGCATTCCACGGAGAT...AGAGCTTGACTGGGAAGGACAGGATAGTGGTGATGGTTCCTGAGAACTGTAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp TTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGACTAGTCCTTCCTCAGTaGCCTCTTTATCACCCAGAA +
Preference number: 4 (lower is better)
Translates to: FWQSLALENHGDKGLGRRLVLPQ*PLYHPE
Trigger: TTCTGGGTGATAAAGAGGGCACTGAGGAAGGACTAG...TCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCGCTGCTTGGAACAAATaGAACAGGGGTAGATACCTG +
Preference number: 4 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFAAWNK*NRGRYL
Trigger: CAGGTATCTACCCCTGTTCCATTTGTTCCAAGCAGC...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGTGCTTCCATTCCCACTaGATCATGTTGTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: IRVLFVGRGDGDAQATPECFHSH*IMLFFL
Trigger: AAGAAAGAACAACATGATCCAGTGGGAATGGAAGCA...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTAGAATCAAATTCCTTTaGACAGAGAGAGCATTGATA +
Preference number: 4 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPRIKFL*TERALI
Trigger: TATCAATGCTCTCTCTGTCCAAAGGAATTTGATTCT...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATCCTGCTCCTTCCAAATaGCTAGGAACATTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GENLALSAFWQSLALENHPAPSK*LGTFSV
Trigger: GACAGAGAATGTTCCTAGCCATTTGGAAGGAGCAGG...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAACCTGCTCCTTCCAAATaGCTAGGAACATTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LALSAFWQSLALENHGDKPAPSK*LGTFSV
Trigger: GACAGAGAATGTTCCTAGCCATTTGGAAGGAGCAGG...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
3UTR CAA 72 bp TCTGGGCAAGGGCATACCATTTCAGGGACATCACCCTaGGTGGCTGTAGATGGAACAGTTTTCTCTCTAGAT +
Preference number: 4 (lower is better)
Translates to: SGQGHTISGTSP*VAVDGTVFSLD
Trigger: ATCTAGAGAGAAAACTGTTCCATCTACAGCCACCAAGGGTGATGTCCCTGAAATGGTATGCCCTTGCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCAGAGCAGCTGCATTaGATAGCTGCTTGGAACAAA +
Preference number: 4 (lower is better)
Translates to: FWQSLALENHGDKGLGRRSEQLH*IAAWNK
Trigger: TTTGTTCCAAGCAGCTATTCAATGCAGCTGCTCTGA...TCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAATTTTCGAGGACAAAGTaGACACTGGTACTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LALSAFWQSLALENHGDKFSRTK*TLVLSC
Trigger: ACAGGAGAGTACCAGTGTTCACTTTGTCCTCGAAAA...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp AGCCTCTCCCTGCCTGCCCCATCCTTCAGTCAACTGTTCTTTGGAGACCTGTCAGATGTTCGAGACTTTTaGGATCTTCAAACAACATTC +
Preference number: 4 (lower is better)
Translates to: SLSLPAPSFSQLFFGDLSDVRDF*DLQTTF
Trigger: GAATGTTGTTTGAAGATCTCAAAAGTCTCGAACATC...TGACAGGTCTCCAAAGAACAGTTGACTGAAGGATGGGGCAGGCAGGGAGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp GATTCTCAGATGCTCACTGAAAGAAAACAGCCATTCCTCCTTGGTTATATAAGATCTGATGGGGCCTCCTaGGCTTTCCCTGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: DSQMLTERKQPFLLGYIRSDGAS*AFPGPG
Trigger: TCCTGGTCCAGGGAAAGCTCAGGAGGCCCCATCAGA...TCTTATATAACCAAGGAGGAATGGCTGTTTTCTTTCAGTGAGCATCTGAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATTGCAACCATTTCTGTTaGATCACCTGCTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: GENLALSAFWQSLALENHCNHFC*ITCSFQ
Trigger: TTGGAAGGAGCAGGTGATGCAACAGAAATGGTTGCA...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGCAACCATTTCTGTTaGATCACCTGCTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGCNHFC*ITCSFQ
Trigger: TTGGAAGGAGCAGGTGATGCAACAGAAATGGTTGCA...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAACAGTGTCTTCCAACTTaGCTTCTGGCTTGGTTAACT +
Preference number: 4 (lower is better)
Translates to: LALSAFWQSLALENHGDKQCLPT*LLAWLT
Trigger: AGTTAACCAAGCCAGAAGGCAAGTTGGAAGACACTG...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp TTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCTCCTTGTCTTCAGCTaGTGGGAAATGTATTCCTTG +
Preference number: 4 (lower is better)
Translates to: FGRVWPWKIMVTKGWEGDLLVFS*WEMYSL
Trigger: CAAGGAATACATTTCCCAGCAGCTGAAGACAAGGAG...ATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTAAATCACCTGTCTGGTaGATCTTTCGGTGGTTTACC +
Preference number: 4 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGKSPVW*IFRWFT
Trigger: GGTAAACCACCGAAAGATCCACCAGACAGGTGATTT...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GATTCTCAGATGCTCACTGAAAGAAAACAGCCATTCCTCCTTGGTTATATAAGAGCATGGACTCGCTGGTaGTTGGCCAGCTGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: DSQMLTERKQPFLLGYIRAWTRW*LASCFR
Trigger: GCGAAAGCAGCTGGCCAACCACCAGCGAGTCCATGC...TCTTATATAACCAAGGAGGAATGGCTGTTTTCTTTCAGTGAGCATCTGAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTAGGTTGTGGATCTCAGTaGTCACAGGATTCAAGAACT +
Preference number: 4 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLGCGSQ*SQDSRT
Trigger: AGTTCTTGAATCCTGTGACCACTGAGATCCACAACC...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp ACAGTTTTCTCTCTAGATGTGGAAGATGAGCTTACAGCCCCATGCCTCCACATCTCAGAGCAGCTGCATTaGATAGCTGCTTGGAACAAA +
Preference number: 4 (lower is better)
Translates to: TVFSLDVEDELTAPCLHISEQLH*IAAWNK
Trigger: TTTGTTCCAAGCAGCTATTCAATGCAGCTGCTCTGA...GATGTGGAGGCATGGGGCTGTAAGCTCATCTTCCACATCTAGAGAGAAAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp TGGACCTGCAGACCACTAACTATCTGTATGACAACCCAGGAGTTGGCAATCCTTTTTTCGAGGACAAAGTaGACACTGGTACTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: WTCRPLTICMTTQELAILFSRTK*TLVLSC
Trigger: ACAGGAGAGTACCAGTGTTCACTTTGTCCTCGAAAA...AAGGATTGCCAACTCCTGGGTTGTCATACAGATAGTTAGTGGTCTGCAGGTCCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAACAGAGCAGACAAATGTaGCAGTCTTTCCCATTAATG +
Preference number: 4 (lower is better)
Translates to: LALSAFWQSLALENHGDKQSRQM*QSFPLM
Trigger: CATTAATGGGAAAGACTGTCACATTTGTCTGCTCTG...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCCCTTTAGAATCTGGCTaGATTTCTAAGCCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLPLESG*ISKPCL
Trigger: AAGACAAGGCTTAGAAATGCAGCCAGATTCTAAAGG...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR GCA 90 bp GGTGACAAAGGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGCTGCATTGAATAGCTaGTTGGAACAAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: GDKGLGRRSFILHGHRHEAALNS*LEQMEQ
Trigger: CTGTTCCATTTGTTCCAAGCAGCTATTCAATGCAGC...TTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCCTTTGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATTGCTTCCATTCCCACTaGATCATGTTGTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LGENLALSAFWQSLALENCFHSH*IMLFFL
Trigger: AAGAAAGAACAACATGATCCAGTGGGAATGGAAGCA...ATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTAACTTGCCTTCTGGCTTaGTTAACTGATCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLTCLLA*LTDPEE
Trigger: TTCTTCAGGATCAGTTAACCAAGCCAGAAGGCAAGT...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAACTTGCCTTCTGGCTTaGTTAACTGATCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LALSAFWQSLALENHGDKTCLLA*LTDPEE
Trigger: TTCTTCAGGATCAGTTAACCAAGCCAGAAGGCAAGT...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp ACTATCCTGTCCTTCCCAGTCAAGCTCTGGGCAAGGGCATACCATTTCAGGGACGATTCAAGAACTCTTTaGAACAGAGCAGACAAATGT +
Preference number: 4 (lower is better)
Translates to: TILSFPVKLWARAYHFRDDSRTL*NRADKC
Trigger: ACATTTGTCTGCTCTGTTCCAAAGAGTTCTTGAATC...GTCCCTGAAATGGTATGCCCTTGCCCAGAGCTTGACTGGGAAGGACAGGATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR TCA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGTGAAGTTCACTACTaGTTCAGCCAAATACTGTTC +
Preference number: 4 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGCEVHY*FSQILF
Trigger: GAACAGTATTTGGCTGAATCAGTAGTGAACTTCACA...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR GCA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGGACTCACACACTTTaGTACAATTACTACAAGCAA +
Preference number: 4 (lower is better)
Translates to: GENLALSAFWQSLALENHGTHTL*YNYYKQ
Trigger: TTGCTTGTAGTAATTGTAGCAAAGTGTGTGAGTCCC...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GTTACAGTTCTCAGGAACCATCACCACTATCCTGTCCTTCCCAGTCAAGCTCTGGGGACTCACACACTTTaGTACAATTACTACAAGCAA +
Preference number: 4 (lower is better)
Translates to: VTVLRNHHHYPVLPSQALGTHTL*YNYYKQ
Trigger: TTGCTTGTAGTAATTGTAGCAAAGTGTGTGAGTCCC...CAGAGCTTGACTGGGAAGGACAGGATAGTGGTGATGGTTCCTGAGAACTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR GCA 90 bp GATTCTCAGATGCTCACTGAAAGAAAACAGCCATTCCTCCTTGGTTATATAAGACCTCTAGATCCAGCCTaGAAACAGTCCCCATCCCTT +
Preference number: 4 (lower is better)
Translates to: DSQMLTERKQPFLLGYIRPLDPA*KQSPSL
Trigger: AAGGGATGGGGACTGTTTGCAGGCTGGATCTAGAGG...TCTTATATAACCAAGGAGGAATGGCTGTTTTCTTTCAGTGAGCATCTGAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CCA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCAGAATCAAATTCCTTTaGACAGAGAGAGCATTGATA +
Preference number: 4 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLRIKFL*TERALI
Trigger: TATCAATGCTCTCTCTGTCCAAAGGAATTTGATTCT...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 90 bp GCCACTGAGGCTCCTGAGCTCGACACTGGCCACTCTTCCTGGTGCTaGTGCTGGTGTCGCAGAAAGCTGATTCGGTGGCGGAAGCGGCGA +
Preference number: 5 (lower is better)
Translates to: ATEAPELDTGHSSWC*CWCRRKLIRWRKRR
Trigger: TCGCCGCTTCCGCCACCGAATCAGCTTTCTGCGACACCAGCAGCAGCACCAGGAAGAGTGGCCAGTGTCGAGCTCAGGAGCCTCAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS GCA 90 bp GGTGCCACTGAGGCTCCTGAGCTCGACACTGGCCACTCTTCCTGGTaGTGCTGCTGGTGTCGCAGAAAGCTGATTCGGTGGCGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: GATEAPELDTGHSSW*CCWCRRKLIRWRKR
Trigger: CCGCTTCCGCCACCGAATCAGCTTTCTGCGACACCAGCAGCAGCACCAGGAAGAGTGGCCAGTGTCGAGCTCAGGAGCCTCAGTGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS CCA 90 bp GCTGATTCGGTGGCGGAAGCGGCGAGGACAATGAGAACAGGTGAATaGTCCCTCCTGGGGTGCATGGACCCGTCCATGGCCCTGAAGCCG +
Preference number: 5 (lower is better)
Translates to: ADSVAEAARTMRTGE*SLLGCMDPSMALKP
Trigger: CGGCTTCAGGGCCATGGACGGGTCCATGCACCCCAGGAGGGACCATTCACCTGTTCTCATTGTCCTCGCCGCTTCCGCCACCGAATCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 90 bp ACCCCATTCTCCTCTGGGTCTCCAGGAAGTTCTGATGGGGCCTCCTaGGCTTTCCCTGGACCAGGAGGACCCACCTCTGCCATCCCAGCC +
Preference number: 5 (lower is better)
Translates to: TPFSSGSPGSSDGAS*AFPGPGGPTSAIPA
Trigger: GGCTGGGATGGCAGAGGTGGGTCCTCCTGGTCCAGGGAAAGCTCAGGAGGCCCCATCAGAACTTCCTGGAGACCCAGAGGAGAATGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 90 bp ACTGAGGCTCCTGAGCTCGACACTGGCCACTCTTCCTGGTGCTGCTaGTGGTGTCGCAGAAAGCTGATTCGGTGGCGGAAGCGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: TEAPELDTGHSSWCC*WCRRKLIRWRKRRG
Trigger: TCCTCGCCGCTTCCGCCACCGAATCAGCTTTCTGCGACACCAGCAGCAGCACCAGGAAGAGTGGCCAGTGTCGAGCTCAGGAGCCTCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS CCA 90 bp CCTCTGACCCCAGGAGTCAGTAGCCATGGTCTCACTCCCAAGGTGTaGAGCGGTTTCCATGGCATGTGGAGGCCCGTGCCTTCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: PLTPGVSSHGLTPKV*SGFHGMWRPVPSVA
Trigger: AGCCACCGAAGGCACGGGCCTCCACATGCCATGGAAACCGCTCCACACCTTGGGAGTGAGACCATGGCTACTGACTCCTGGGGTCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS CCA 90 bp CCTGCTTTAGCCCCTCATGGGACTGCTGATGTTCCAGCAGATCCCTaGGGAGCCGAAAGGCACGGGGGCAGTGAGGACAGTGGTAAGGCC +
Preference number: 5 (lower is better)
Translates to: PALAPHGTADVPADP*GAERHGGSEDSGKA
Trigger: GGCCTTACCACTGTCCTCACTGCCCCCGTGCCTTTCGGCTCCCCAGGGATCTGCTGGAACATCAGCAGTCCCATGAGGGGCTAAAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
ENSMUST00000206340.2
CDS CCA 90 bp CCACACTGCCCACATCTGAAAGGCCGGTCCTCACGAGTCAGTTTCTaGGTGCCCCTACTCCTGCGTCGCTCAGCATGGACTCGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: PHCPHLKGRSSRVSF*VPLLLRRSAWTRWW
Trigger: CCACCAGCGAGTCCATGCTGAGCGACGCAGGAGTAGGGGCACCCAGAAACTGACTCGTGAGGACCGGCCTTTCAGATGTGGGCAGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 90 bp GAGGCTCCTGAGCTCGACACTGGCCACTCTTCCTGGTGCTGCTGCTaGTGTCGCAGAAAGCTGATTCGGTGGCGGAAGCGGCGAGGACAA +
Preference number: 5 (lower is better)
Translates to: EAPELDTGHSSWCCC*CRRKLIRWRKRRGQ
Trigger: TTGTCCTCGCCGCTTCCGCCACCGAATCAGCTTTCTGCGACACCAGCAGCAGCACCAGGAAGAGTGGCCAGTGTCGAGCTCAGGAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS CCA 90 bp GCTGGTGCCACTGAGGCTCCTGAGCTCGACACTGGCCACTCTTCCTaGTGCTGCTGCTGGTGTCGCAGAAAGCTGATTCGGTGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: AGATEAPELDTGHSS*CCCWCRRKLIRWRK
Trigger: CTTCCGCCACCGAATCAGCTTTCTGCGACACCAGCAGCAGCACCAGGAAGAGTGGCCAGTGTCGAGCTCAGGAGCCTCAGTGGCACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS GCA 90 bp CCCAACCACATACCTGAGCTCGACACTGGCCACTCTTCCTGGTGCTaGTGCTGGTGTCGCAGAAAGCTGATTCGGTGGCGGAAGCGGCGA +
Preference number: 5 (lower is better)
Translates to: PNHIPELDTGHSSWC*CWCRRKLIRWRKRR
Trigger: TCGCCGCTTCCGCCACCGAATCAGCTTTCTGCGACACCAGCAGCAGCACCAGGAAGAGTGGCCAGTGTCGAGCTCAGGTATGTGGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS GCA 90 bp CTGCCCAACCACATACCTGAGCTCGACACTGGCCACTCTTCCTGGTaGTGCTGCTGGTGTCGCAGAAAGCTGATTCGGTGGCGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: LPNHIPELDTGHSSW*CCWCRRKLIRWRKR
Trigger: CCGCTTCCGCCACCGAATCAGCTTTCTGCGACACCAGCAGCAGCACCAGGAAGAGTGGCCAGTGTCGAGCTCAGGTATGTGGTTGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp CTGCTGGTGCCACTGAGGCTCCTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCTGTACCCGCACATGGTaGCGCAGAGCCATAAGGTTG +
Preference number: 5 (lower is better)
Translates to: LLVPLRLLRREGEDTEGGCTRTW*RRAIRL
Trigger: CAACCTTATGGCTCTGCGCAACCATGTGCGGGTACA...GCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAGGAGCCTCAGTGGCACCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS TCA 90 bp CTGTTCCAAATTGCTAAGAAGGTTGCTCGCTGGAGTGGGGAGTGGTaGTGCTCCTTCGGAACTGACGGCGGGCACCCAGTCCGCCGTACC +
Preference number: 5 (lower is better)
Translates to: LFQIAKKVARWSGEW*CSFGTDGGHPVRRT
Trigger: GGTACGGCGGACTGGGTGCCCGCCGTCAGTTCCGAAGGAGCATCACCACTCCCCACTCCAGCGAGCAACCTTCTTAGCAATTTGGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS TCA 90 bp GGTGTGGGCCTTCTGGTGGTTCAGCAGGCTACCGGCATGGCGGTATaGACGCCCACACTGAGCACAGCAAAAGGGACGCTCCTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: GVGLLVVQQATGMAV*TPTLSTAKGTLLVF
Trigger: GAAGACAAGGAGCGTCCCTTTTGCTGTGCTCAGTGTGGGCGTTCATACCGCCATGCCGGTAGCCTGCTGAACCACCAGAAGGCCCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 90 bp GAGTCTCATGGTTCCTCTGATGGTTGGCCAAGTTCTCCGGGTGACTaGCATAGGGGTGAGGGATGCCATCGGCTTCCTCCCCGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: ESHGSSDGWPSSPGD*HRGEGCHRLPPRPA
Trigger: AGCAGGACGGGGAGGAAGCCGATGGCATCCCTCACCCCTATGGCAGTCACCCGGAGAACTTGGCCAACCATCAGAGGAACCATGAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS GCA 90 bp AACCACATACCTGAGCTCGACACTGGCCACTCTTCCTGGTGCTGCTaGTGGTGTCGCAGAAAGCTGATTCGGTGGCGGAAGCGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: NHIPELDTGHSSWCC*WCRRKLIRWRKRRG
Trigger: TCCTCGCCGCTTCCGCCACCGAATCAGCTTTCTGCGACACCAGCAGCAGCACCAGGAAGAGTGGCCAGTGTCGAGCTCAGGTATGTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS CCA 90 bp AGCCATGGTCTCACTCCCAAGGTGTGGAGCGGTTTCCATGGCATGTaGAGGCCCGTGCCTTCGGTGGCTCTCAGGAGCATGAGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: SHGLTPKVWSGFHGM*RPVPSVALRSMSPH
Trigger: ATGAGGACTCATGCTCCTGAGAGCCACCGAAGGCACGGGCCTCCACATGCCATGGAAACCGCTCCACACCTTGGGAGTGAGACCATGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS CCA 90 bp CACATACCTGAGCTCGACACTGGCCACTCTTCCTGGTGCTGCTGCTaGTGTCGCAGAAAGCTGATTCGGTGGCGGAAGCGGCGAGGACAA +
Preference number: 5 (lower is better)
Translates to: HIPELDTGHSSWCCC*CRRKLIRWRKRRGQ
Trigger: TTGTCCTCGCCGCTTCCGCCACCGAATCAGCTTTCTGCGACACCAGCAGCAGCACCAGGAAGAGTGGCCAGTGTCGAGCTCAGGTATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS CCA 90 bp CCTCTGCCCAACCACATACCTGAGCTCGACACTGGCCACTCTTCCTaGTGCTGCTGCTGGTGTCGCAGAAAGCTGATTCGGTGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: PLPNHIPELDTGHSS*CCCWCRRKLIRWRK
Trigger: CTTCCGCCACCGAATCAGCTTTCTGCGACACCAGCAGCAGCACCAGGAAGAGTGGCCAGTGTCGAGCTCAGGTATGTGGTTGGGCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TGCGTCCTGTGTGTGAGGCCCCAGGTCTCACCGTGCCCAGCATCTTTCCCTCACCACCTCACGCTGCAGTaGATTCAGCAGCTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: CVLCVRPQVSPCPASFPHHLTLQ*IQQLCF
Trigger: GAAGCAGAGCTGCTGAATCAACTGCAGCGTGAGGTG...GTGAGGGAAAGATGCTGGGCACGGTGAGACCTGGGGCCTCACACACAGGACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp CTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCCTACACCACCTCTCAGCCCTGTCCCACACTTCTTCTTaGACACCTGCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LRREGEDTEGGLHHLSALSHTSS*TPASSS
Trigger: GGAGGAGCTGGCAGGTGTCAAAGAAGAAGTGTGGGA...CAGGGCTGAGAGGTGGTGTAGGCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTCGGCTGGCCTCAGGGTaGCACTGGTGGTTCATGAGA +
Preference number: 5 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPRLASG*HWWFMR
Trigger: TCTCATGAACCACCAGTGCAACCCTGAGGCCAGCCG...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 90 bp TGGAACAAGGGTAGATGCCCAGAGTGTGACTCTGGCGGTGGTTGGTaGGGCTCCCGGCATGCTTATAGGTCTTCCCGCACTCACTGCACC +
Preference number: 5 (lower is better)
Translates to: WNKGRCPECDSGGGW*GSRHAYRSSRTHCT
Trigger: GGTGCAGTGAGTGCGGGAAGACCTATAAGCATGCCGGGAGCCTCACCAACCACCGCCAGAGTCACACTCTGGGCATCTACCCTTGTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
ENSMUST00000206340.2
CDS TCA 90 bp AGGCCAGCAGCATGGGAGAAAGAATCTCCACAGTCAGAACAGGTGTaGGTGGCTGCGGCCTTCCAGACAGTGTCAGCGTCAGCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: RPAAWEKESPQSEQV*VAAAFQTVSASAGW
Trigger: CCACCCTGCTGACGCTGACACTGTCTGGAAGGCCGCAGCCACTCACACCTGTTCTGACTGTGGAGATTCTTTCTCCCATGCTGCTGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 90 bp CCCAGGAAAGATCATACCGCACAGGCAGCAGAGGAAGGGCTGTGCTaGGGCTACCTCTCCTGGCCGATGGGTCTGGAAGTGACTTCGAAG +
Preference number: 5 (lower is better)
Translates to: PRKDHTAQAAEEGLC*GYLSWPMGLEVTSK
Trigger: CTTCGAAGTCACTTCCAGACCCATCGGCCAGGAGAGGTAGCCTCAGCACAGCCCTTCCTCTGCTGCCTGTGCGGTATGATCTTTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 90 bp AGCCTCCTGCTTCTGAGATGGGCCCCATTTGGGGCTCTGAGCCTTTaGAGCGAGGGTGATTCCGCAGATGATTCCGGTAGGCAGCCAGAT +
Preference number: 5 (lower is better)
Translates to: SLLLLRWAPFGALSL*SEGDSADDSGRQPD
Trigger: ATCTGGCTGCCTACCGGAATCATCTGCGGAATCACCCTCGCTGCAAAGGCTCAGAGCCCCAAATGGGGCCCATCTCAGAAGCAGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTAGGTTTGAGAAACCCTaGGAGCAGGCCTGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPRFEKP*EQAWQP
Trigger: TGGCTGCCAGGCCTGCTCCAAGGGTTTCTCAAACCT...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 90 bp GGTCACTGTCCATCCCAGGGAGGCCACCACAGAAGCCAGTTTCATTaGACTCATCACCTGGGGTGCCTAGGTCGTCAAGGAAACAGGCCT +
Preference number: 5 (lower is better)
Translates to: GHCPSQGGHHRSQFH*THHLGCLGRQGNRP
Trigger: AGGCCTGTTTCCTTGACGACCTAGGCACCCCAGGTGATGAGTGCAATGAAACTGGCTTCTGTGGTGGCCTCCCTGGGATGGACAGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 90 bp CTCCTTGACTCCCATCTACTTTCCCCACCTGCTGTGTGGATTCTGTaGCTCCTGAACACGCTGGGCTACTGGGACTCTGACTGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: LLDSHLLSPPAVWIL*LLNTLGYWDSDCVP
Trigger: GGGGACACAGTCAGAGTCCCAGTAGCCCAGCGTGTTCAGGAGGCACAGAATCCACACAGCAGGTGGGGAAAGTAGATGGGAGTCAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 90 bp CACTCACTGCAGCGGAACTGTCGAGGGTCTGCATGGATGCGCCGGTaGTTCTTGAGTGACATGAGGTTTGAGAAACCCTTGGAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: HSLQRNCRGSAWMRR*FLSDMRFEKPLEQA
Trigger: GGCCTGCTCCAAGGGTTTCTCAAACCTCATGTCACTCAAGAACCACCGGCGCATCCATGCAGACCCTCGACAGTTCCGCTGCAGTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 90 bp CCACCTGCTGTGTGGATTCTGTGCCTCCTGAACACGCTGGGCTACTaGGACTCTGACTGTGTCCCCCAGGCCTCTTGGTTTCATGTTCCA +
Preference number: 5 (lower is better)
Translates to: PPAVWILCLLNTLGY*DSDCVPQASWFHVP
Trigger: TGGAACATGAAACCAAGAGGCCTGGGGGACACAGTCAGAGTCCCAGTAGCCCAGCGTGTTCAGGAGGCACAGAATCCACACAGCAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 90 bp CTGGACCAGGAGGACCCACCTCTGCCATCCCAGCCTGTGGACCTCTaGTCTTCTCCATCTGACCTGACATCTGACTGTGCTCAACAGCAT +
Preference number: 5 (lower is better)
Translates to: LDQEDPPLPSQPVDL*SSPSDLTSDCAQQH
Trigger: ATGCTGTTGAGCACAGTCAGATGTCAGGTCAGATGGAGAAGACCAGAGGTCCACAGGCTGGGATGGCAGAGGTGGGTCCTCCTGGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp CCCCTGTCACAGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTTGTACCCGCACATGGTaGCGCAGAGCCATAAGGTTG +
Preference number: 5 (lower is better)
Translates to: PLSQAAFAPVVLSDLPLPCTRTW*RRAIRL
Trigger: CAACCTTATGGCTCTGCGCAACCATGTGCGGGTACA...AGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCTGTGACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 90 bp TCCATGGCATGTGGAGGCCCGTGCCTTCGGTGGCTCTCAGGAGCATaGGTCCTCATATGGCTCTGGAGGGCCAAGCGATTAGAAAAATCC +
Preference number: 5 (lower is better)
Translates to: SMACGGPCLRWLSGA*VLIWLWRAKRLEKS
Trigger: GGATTTTTCTAATCGCTTGGCCCTCCAGAGCCATATGAGGACTCATGCTCCTGAGAGCCACCGAAGGCACGGGCCTCCACATGCCATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS GCA 90 bp GGAAAGGGCGAGGGTGGGACTCCAGAAAGCTTTCACCAGCCTGCATaGAAAGGCTGTCTGCAACTGTGCCACCTACTCCCTCTTCAGACT +
Preference number: 5 (lower is better)
Translates to: GKGEGGTPESFHQPA*KGCLQLCHLLPLQT
Trigger: AGTCTGAAGAGGGAGTAGGTGGCACAGTTGCAGACAGCCTTTGCATGCAGGCTGGTGAAAGCTTTCTGGAGTCCCACCCTCGCCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 90 bp AACACGCTGGGCTACTGGGACTCTGACTGTGTCCCCCAGGCCTCTTaGTTTCATGTTCCACCTGCAGTACCTCAGTACCATCTGACCTGC +
Preference number: 5 (lower is better)
Translates to: NTLGYWDSDCVPQAS*FHVPPAVPQYHLTC
Trigger: GCAGGTCAGATGGTACTGAGGTACTGCAGGTGGAACATGAAACCAAGAGGCCTGGGGGACACAGTCAGAGTCCCAGTAGCCCAGCGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp AGCCTCTCCCTGCCTGCCCCATCCTTCAGTCAACTGTTCTTTGGAGACCTGTCACTTCGGCGTGTAGCCTaGCAATGTACCCGCACATGG +
Preference number: 5 (lower is better)
Translates to: SLSLPAPSFSQLFFGDLSLRRVA*QCTRTW
Trigger: CCATGTGCGGGTACATTGCAAGGCTACACGCCGAAG...TGACAGGTCTCCAAAGAACAGTTGACTGAAGGATGGGGCAGGCAGGGAGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCGCCTTCTGTAGCATGTaGGCCTCCCTGGCCACTGGC +
Preference number: 5 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLAFCSM*ASLATG
Trigger: GCCAGTGGCCAGGGAGGCCAACATGCTACAGAAGGC...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp AGCCTCTCCCTGCCTGCCCCATCCTTCAGTCAACTGTTCTTTGGAGACCTGTCAGCAGTGGCTTTCTGGTaGGAGTTGAGAGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: SLSLPAPSFSQLFFGDLSAVAFW*ELRAAV
Trigger: GACAGCGGCTCTCAACTCCAACCAGAAAGCCACTGC...TGACAGGTCTCCAAAGAACAGTTGACTGAAGGATGGGGCAGGCAGGGAGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 90 bp ACTATGGGTAGAGGCTGTTTCTGCTGTGCCTTCCTCCTCTTCTTCTaGGCCCTCAGTCATGGCAGAAGCTCCATGAGCCTGGCGCAGATG +
Preference number: 5 (lower is better)
Translates to: TMGRGCFCCAFLLFF*ALSHGRSSMSLAQM
Trigger: CATCTGCGCCAGGCTCATGGAGCTTCTGCCATGACTGAGGGCTCAGAAGAAGAGGAGGAAGGCACAGCAGAAACAGCCTCTACCCATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCATGGTATGGAAATGCTaGGCACAGGCCCCACAACTG +
Preference number: 5 (lower is better)
Translates to: SHQWFSLICLSLGENLALMVWKC*AQAPQL
Trigger: CAGTTGTGGGGCCTGTGCCAAGCATTTCCATACCAT...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTGGACAGAGAGAGCATaGATAGATGCCTGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: SHQWFSLICLSLGENLALWTERA*IDAWRV
Trigger: CACCCTCCAGGCATCTATCAATGCTCTCTCTGTCCA...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCACCTCACGCTGCAGTaGATTCAGCAGCTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RQLSHQWFSLICLSLGENHLTLQ*IQQLCF
Trigger: GAAGCAGAGCTGCTGAATCAACTGCAGCGTGAGGTG...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGGCCACACTGGTTACATaGGAAAGGGCGAGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: SLICLSLGENLALSAFWQATLVT*ERARVG
Trigger: TCCCACCCTCGCCCTTTCCAATGTAACCAGTGTGGC...CTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTCGGCTGGCCTCAGGGTaGCACTGGTGGTTCATGAGA +
Preference number: 5 (lower is better)
Translates to: WFSLICLSLGENLALSAFRLASG*HWWFMR
Trigger: TCTCATGAACCACCAGTGCAACCCTGAGGCCAGCCG...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGGCTTTCTGGTTGGAGTaGAGAGCCGCTGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: SLICLSLGENLALSAFWQAFWLE*RAAVST
Trigger: GGTGCTGACAGCGGCTCTCAACTCCAACCAGAAAGC...CTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 90 bp ATGGTTGCGCAGAGCCATAAGGTTGGGGTATTTTCGAGGACAAAGTaGACACTGGTACTCTCCTGTCCGGTGGCTGTGGCGGTGGTTCAC +
Preference number: 5 (lower is better)
Translates to: MVAQSHKVGVFSRTK*TLVLSCPVAVAVVH
Trigger: GTGAACCACCGCCACAGCCACCGGACAGGAGAGTACCAGTGTTCACTTTGTCCTCGAAAATACCCCAACCTTATGGCTCTGCGCAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
ENSMUST00000206340.2
CDS TCA 90 bp CTCTGCCATCCCAGCCTGTGGACCTCTGGTCTTCTCCATCTGACCTaGCATCTGACTGTGCTCAACAGCATGAGTCTTCATGTGTGTGGC +
Preference number: 5 (lower is better)
Translates to: LCHPSLWTSGLLHLT*HLTVLNSMSLHVCG
Trigger: GCCACACACATGAAGACTCATGCTGTTGAGCACAGTCAGATGTCAGGTCAGATGGAGAAGACCAGAGGTCCACAGGCTGGGATGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 90 bp CTGACGGCGGGCACCCAGTCCGCCGTACCTCCTTTAGAATCTGGCTaGATTTCTAAGCCTTGTCTTTGTTTGGTAGGTGGATCTTCCCAC +
Preference number: 5 (lower is better)
Translates to: LTAGTQSAVPPLESG*ISKPCLCLVGGSSH
Trigger: GTGGGAAGATCCACCTACCAAACAAAGACAAGGCTTAGAAATGCAGCCAGATTCTAAAGGAGGTACGGCGGACTGGGTGCCCGCCGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS GCA 90 bp CTCTTCCTTTACAGCGGTCCCCTCCCACACTTCTTCTTTGACACCTaGCAGCTCCTCCAAGGGCTCCACTTTAAGCTCTTCCTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: LFLYSGPLPHFFFDT*QLLQGLHFKLFLEL
Trigger: CAACTCCAGGAAGAGCTTAAAGTGGAGCCCTTGGAGGAGCTGGCAGGTGTCAAAGAAGAAGTGTGGGAGGGGACCGCTGTAAAGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 90 bp TGGCCACTGGCTACCTCTAGTTTGGTGTCCTCATGCTCCTGTAGATaGTGCTCTAGAGATCCCTGGCCAGAAAAGCCACAGCCACATAGG +
Preference number: 5 (lower is better)
Translates to: WPLATSSLVSSCSCR*CSRDPWPEKPQPHR
Trigger: CCTATGTGGCTGTGGCTTTTCTGGCCAGGGATCTCTAGAGCAGCATCTACAGGAGCATGAGGACACCAAACTAGAGGTAGCCAGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 90 bp ACGCCCACACTGAGCACAGCAAAAGGGACGCTCCTTGTCTTCAGCTaGTGGGAAATGTATTCCTTGTCCTCCGTTAGCTGGCACCCCATT +
Preference number: 5 (lower is better)
Translates to: TPTLSTAKGTLLVFS*WEMYSLSSVSWHPI
Trigger: AATGGGGTGCCAGCTAACGGAGGACAAGGAATACATTTCCCAGCAGCTGAAGACAAGGAGCGTCCCTTTTGCTGTGCTCAGTGTGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 90 bp TTCAGTTTCACAAGGACTTTCTCCCAAAGGATCTTGGGAAGAATCTaGGTCCTCGTCGTTTTCCAGCTTCAGGGTCCAGGCGCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: FSFTRTFSQRILGRI*VLVVFQLQGPGAPR
Trigger: CCTGGGGGCGCCTGGACCCTGAAGCTGGAAAACGACGAGGACCCAGATTCTTCCCAAGATCCTTTGGGAGAAAGTCCTTGTGAAACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 90 bp CCCACACTGAGCACAGCAAAAGGGACGCTCCTTGTCTTCAGCTGCTaGGAAATGTATTCCTTGTCCTCCGTTAGCTGGCACCCCATTCTC +
Preference number: 5 (lower is better)
Translates to: PTLSTAKGTLLVFSC*EMYSLSSVSWHPIL
Trigger: GAGAATGGGGTGCCAGCTAACGGAGGACAAGGAATACATTTCCCAGCAGCTGAAGACAAGGAGCGTCCCTTTTGCTGTGCTCAGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCGCAGTGGCTTTCTGGTaGGAGTTGAGAGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLAVAFW*ELRAAV
Trigger: GACAGCGGCTCTCAACTCCAACCAGAAAGCCACTGC...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp CTGCGGAGAGAAGGAGAGGACACTGAGGGAGGCCTACACCACCTCTCAGCCCTGGGATTCAAGAACTCTTaGGAACAGAGCAGACAAATG +
Preference number: 5 (lower is better)
Translates to: LRREGEDTEGGLHHLSALGFKNS*EQSRQM
Trigger: CATTTGTCTGCTCTGTTCCAAAGAGTTCTTGAATCC...CAGGGCTGAGAGGTGGTGTAGGCCTCCCTCAGTGTCCTCTCCTTCTCTCCGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS GCA 90 bp CCACTGGCTACCTCTAGTTTGGTGTCCTCATGCTCCTGTAGATGCTaGTCTAGAGATCCCTGGCCAGAAAAGCCACAGCCACATAGGGTA +
Preference number: 5 (lower is better)
Translates to: PLATSSLVSSCSCRC*SRDPWPEKPQPHRV
Trigger: TACCCTATGTGGCTGTGGCTTTTCTGGCCAGGGATCTCTAGAGCAGCATCTACAGGAGCATGAGGACACCAAACTAGAGGTAGCCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 90 bp CTGTACTTTCGCTCCCCCTCAGTAGGAAGAGGCTCAGTGGGCTCCTaGGCCTCTGTGAAGTTCACTACTGATTCAGCCAAATACTGTTCC +
Preference number: 5 (lower is better)
Translates to: LYFRSPSVGRGSVGS*ASVKFTTDSAKYCS
Trigger: GGAACAGTATTTGGCTGAATCAGTAGTGAACTTCACAGAGGCCCAGGAGCCCACTGAGCCTCTTCCTACTGAGGGGGAGCGAAAGTACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS-3UTR CAA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCGATTAGAAAAATCCTaGCCACAGGTGGTACAGGGG +
Preference number: 5 (lower is better)
Translates to: RQLSHQWFSLICLSLGENRLEKS*PQVVQG
Trigger: CCCCTGTACCACCTGTGGCAAGGATTTTTCTAATCG...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR CAA 90 bp GTTACAGTTCTCAGGAACCATCACCACTATCCTGTCCTTCCCAGTCAAGCTCTGCTTCGGCGTGTAGCCTaGCAATGTACCCGCACATGG +
Preference number: 5 (lower is better)
Translates to: VTVLRNHHHYPVLPSQALLRRVA*QCTRTW
Trigger: CCATGTGCGGGTACATTGCAAGGCTACACGCCGAAG...CAGAGCTTGACTGGGAAGGACAGGATAGTGGTGATGGTTCCTGAGAACTGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCGCTCTTGCCACAGTCTaGGCAAGCAAATGTTCTAGT +
Preference number: 5 (lower is better)
Translates to: SHQWFSLICLSLGENLALALATV*ASKCSS
Trigger: ACTAGAACATTTGCTTGCCAAGACTGTGGCAAGAGC...GAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TGCGTCCTGTGTGTGAGGCCCCAGGTCTCACCGTGCCCAGCATCTTTCCCTCACGAGAATCAAATTCCTTaGGACAGAGAGAGCATTGAT +
Preference number: 5 (lower is better)
Translates to: CVLCVRPQVSPCPASFPHENQIP*DRESID
Trigger: ATCAATGCTCTCTCTGTCCAAAGGAATTTGATTCTC...GTGAGGGAAAGATGCTGGGCACGGTGAGACCTGGGGCCTCACACACAGGACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TATATAAGAGTTCACACCGCTGCCCAACCTACCCCAGCACCCATCTCCCTGACTGCTAGAACTTTGACTTaGGTGGTGACGCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: YIRVHTAAQPTPAPISLTARTLT*VVTLQA
Trigger: AGCCTGGAGCGTCACCACCAAAGTCAAAGTTCTAGC...AGTCAGGGAGATGGGTGCTGGGGTAGGTTGGGCAGCGGTGTGAACTCTTATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCAGGTTTGAGAAACCCTaGGAGCAGGCCTGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFRFEKP*EQAWQP
Trigger: TGGCTGCCAGGCCTGCTCCAAGGGTTTCTCAAACCT...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATTTGTCCTCTGTCTCCTaGACTCCCATCTACTTTCCC +
Preference number: 5 (lower is better)
Translates to: RQLSHQWFSLICLSLGENLSSVS*TPIYFP
Trigger: GGGAAAGTAGATGGGAGTCAAGGAGACAGAGGACAA...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGAGAACCCAGGCACCATaGTGGTTCATTTGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: IRVLFVGRGDGDAQATPERTQAP*WFICPL
Trigger: CAGAGGACAAATGAACCACAATGGTGCCTGGGTTCT...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTGCTTTCTGGTTGGAGTaGAGAGCCGCTGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGAFWLE*RAAVST
Trigger: GGTGCTGACAGCGGCTCTCAACTCCAACCAGAAAGC...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGCAAAAGGGACGCTCCTaGTCTTCAGCTGCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: SLICLSLGENLALSAFWQQKGRS*SSAAGK
Trigger: TTTCCCAGCAGCTGAAGACAAGGAGCGTCCCTTTTG...CTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 90 bp CGTGGAATGCTGCTTCCATTCCCACTGGATCATGTTGTTCTTTCTTaGCAGGGCTGGGTGAACCTTCAGTCCCTGGATCTGTACTTCGGC +
Preference number: 5 (lower is better)
Translates to: RGMLLPFPLDHVVLS*QGWVNLQSLDLYFG
Trigger: GCCGAAGTACAGATCCAGGGACTGAAGGTTCACCCAGCCCTGTCAAGAAAGAACAACATGATCCAGTGGGAATGGAAGCAGCATTCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 90 bp GTACCACTATCTTGCTTCTGCCGCCTTCTGTTCCACTGCCGACTGTaGCGCCGTAAATGGCTTTTCATCGCAGCCATGGTATGGAAATGC +
Preference number: 5 (lower is better)
Translates to: VPLSCFCRLLFHCRL*RRKWLFIAAMVWKC
Trigger: GCATTTCCATACCATGGCTGCGATGAAAAGCCATTTACGGCGTCACAGTCGGCAGTGGAACAGAAGGCGGCAGAAGCAAGATAGTGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 90 bp TCCCCACCTTCTTCTGAGACGGAGGTCACTGTGCCCTCAAAGCCATaGTCTGCAACCATTTCTGTTGCATCACCTGCTCCTTCCAAATGG +
Preference number: 5 (lower is better)
Translates to: SPPSSETEVTVPSKP*SATISVASPAPSKW
Trigger: CCATTTGGAAGGAGCAGGTGATGCAACAGAAATGGTTGCAGATCATGGCTTTGAGGGCACAGTGACCTCCGTCTCAGAAGAAGGTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 90 bp TGTGCCACCTACTCCCTCTTCAGACTTTATGTCCCCACCTTCTTCTaGGACGGAGGTCACTGTGCCCTCAAAGCCATGATCTGCAACCAT +
Preference number: 5 (lower is better)
Translates to: CATYSLFRLYVPTFF*DGGHCALKAMICNH
Trigger: ATGGTTGCAGATCATGGCTTTGAGGGCACAGTGACCTCCGTCTCAGAAGAAGGTGGGGACATAAAGTCTGAAGAGGGAGTAGGTGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 90 bp CCTGGATCTGTACTTCGGCGTGTAGCCTTGCAATGTACCCGCACATaGTTGCGCAGAGCCATAAGGTTGGGGTATTTTCGAGGACAAAGT +
Preference number: 5 (lower is better)
Translates to: PGSVLRRVALQCTRT*LRRAIRLGYFRGQS
Trigger: ACTTTGTCCTCGAAAATACCCCAACCTTATGGCTCTGCGCAACCATGTGCGGGTACATTGCAAGGCTACACGCCGAAGTACAGATCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 90 bp TACACACCTGTGGCACTGTCCTATCTGCCATTGAGGGGTTACTGGTaGCCTCTTCTTCACGTTTGCATGCATGTTCCTCATCTCCGTGGA +
Preference number: 5 (lower is better)
Translates to: YTPVALSYLPLRGYW*PLLHVCMHVPHLRG
Trigger: TCCACGGAGATGAGGAACATGCATGCAAACGTGAAGAAGAGGCCACCAGTAACCCCTCAATGGCAGATAGGACAGTGCCACAGGTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 90 bp TGCTACACACCTGTGGCACTGTCCTATCTGCCATTGAGGGGTTACTaGTGGCCTCTTCTTCACGTTTGCATGCATGTTCCTCATCTCCGT +
Preference number: 5 (lower is better)
Translates to: CYTPVALSYLPLRGY*WPLLHVCMHVPHLR
Trigger: ACGGAGATGAGGAACATGCATGCAAACGTGAAGAAGAGGCCACCAGTAACCCCTCAATGGCAGATAGGACAGTGCCACAGGTGTGTAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 90 bp AGTTTGGTGTCCTCATGCTCCTGTAGATGCTGCTCTAGAGATCCCTaGCCAGAAAAGCCACAGCCACATAGGGTACAACGTACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SLVSSCSCRCCSRDP*PEKPQPHRVQRTAA
Trigger: AGCAGCTGTACGTTGTACCCTATGTGGCTGTGGCTTTTCTGGCCAGGGATCTCTAGAGCAGCATCTACAGGAGCATGAGGACACCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATGGGGTAGATACCTGTTaGGTGGCTTTTTCGATGGTT +
Preference number: 5 (lower is better)
Translates to: RQLSHQWFSLICLSLGENGVDTC*VAFSMV
Trigger: AACCATCGAAAAAGCCACCAAACAGGTATCTACCCC...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp CTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCAGAAGCCAGTTTCATaGCACTCATCACCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: LGENLALSAFWQSLALENQKPVS*HSSPGV
Trigger: CACCCCAGGTGATGAGTGCAATGAAACTGGCTTCTG...ATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCCCTGCAACCATTTCTGTaGCATCACCTGCTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: WQSLALENHGDKGLGRRSLQPFL*HHLLLP
Trigger: TGGAAGGAGCAGGTGATGCAACAGAAATGGTTGCAG...GGATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGCTGCAACCATTTCTGTaGCATCACCTGCTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: SLICLSLGENLALSAFWQLQPFL*HHLLLP
Trigger: TGGAAGGAGCAGGTGATGCAACAGAAATGGTTGCAG...CTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TGGACCTGCAGACCACTAACTATCTGTATGACAACCCAGGAGTTGGCAATCCTTGCCACACTGGTTACATaGGAAAGGGCGAGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: WTCRPLTICMTTQELAILATLVT*ERARVG
Trigger: TCCCACCCTCGCCCTTTCCAATGTAACCAGTGTGGC...AAGGATTGCCAACTCCTGGGTTGTCATACAGATAGTTAGTGGTCTGCAGGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTATCCCACACTTCTTCTTaGACACCTGCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLSHTSS*TPASSS
Trigger: GGAGGAGCTGGCAGGTGTCAAAGAAGAAGTGTGGGA...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp ATTAGGGTCCTCTTCGTGGGAAGAGGAGATGGGGATGCCCAAGCAACTCCTGAGACAGTGTCTTCCAACTaGCCTTCTGGCTTGGTTAAC +
Preference number: 5 (lower is better)
Translates to: IRVLFVGRGDGDAQATPETVSSN*PSGLVN
Trigger: GTTAACCAAGCCAGAAGGCAAGTTGGAAGACACTGT...CTCAGGAGTTGCTTGGGCATCCCCATCTCCTCTTCCCACGAAGAGGACCCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTAAGGTTAGGCAGAAGTTaGGGACACAGGGAACAGGGG +
Preference number: 5 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLRLGRS*GHREQG
Trigger: CCCCTGTTCCCTGTGTCCCAAACTTCTGCCTAACCT...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 90 bp TCCCTGTATCTTAGAGTAGGACCATTGGACTGGCTCTCAGAGAGGTaGCAAGGATTCCTGGAGACAGTGTCTTCCAACTTGCCTTCTGGC +
Preference number: 5 (lower is better)
Translates to: SLYLRVGPLDWLSER*QGFLETVSSNLPSG
Trigger: GCCAGAAGGCAAGTTGGAAGACACTGTCTCCAGGAATCCTTGTCACCTCTCTGAGAGCCAGTCCAATGGTCCTACTCTAAGATACAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 90 bp TCCTATCTGCCATTGAGGGGTTACTGGTGGCCTCTTCTTCACGTTTaGATGCATGTTCCTCATCTCCGTGGAATGCTGCTTCCATTCCCA +
Preference number: 5 (lower is better)
Translates to: SYLPLRGYWWPLLHV*MHVPHLRGMLLPFP
Trigger: TGGGAATGGAAGCAGCATTCCACGGAGATGAGGAACATGCATGCAAACGTGAAGAAGAGGCCACCAGTAACCCCTCAATGGCAGATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp CTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATAAATTGCTAAGAAGGTaGCTCGCTGGAGTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: LGENLALSAFWQSLALENKLLRR*LAGVGS
Trigger: ACTCCCCACTCCAGCGAGCAACCTTCTTAGCAATTT...ATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR CAA 90 bp TCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGTCATGTTGTTCTTTCTaGACAGGGCTGGGTGAACCT +
Preference number: 5 (lower is better)
Translates to: SLICLSLGENLALSAFWQSCCSF*TGLGEP
Trigger: AGGTTCACCCAGCCCTGTCAAGAAAGAACAACATGA...CTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp ACTATCCTGTCCTTCCCAGTCAAGCTCTGGGCAAGGGCATACCATTTCAGGGACGCCTCTTCTTCACGTTaGCATGCATGTTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: TILSFPVKLWARAYHFRDASSSR*HACSSS
Trigger: AGATGAGGAACATGCATGCAAACGTGAAGAAGAGGC...GTCCCTGAAATGGTATGCCCTTGCCCAGAGCTTGACTGGGAAGGACAGGATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATATGGTATGGAAATGCTaGGCACAGGCCCCACAACTG +
Preference number: 5 (lower is better)
Translates to: GENLALSAFWQSLALENHMVWKC*AQAPQL
Trigger: CAGTTGTGGGGCCTGTGCCAAGCATTTCCATACCAT...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GGTGACAAAGGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAACAGAAGCCAGTTTCATaGCACTCATCACCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: GDKGLGRRSFILHGHRHEQKPVS*HSSPGV
Trigger: CACCCCAGGTGATGAGTGCAATGAAACTGGCTTCTG...TTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCCTTTGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCTGGACAGAGAGAGCATaGATAGATGCCTGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFWTERA*IDAWRV
Trigger: CACCCTCCAGGCATCTATCAATGCTCTCTCTGTCCA...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GGTGACAAAGGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGCTAGAACTTTGACTTaGGTGGTGACGCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: GDKGLGRRSFILHGHRHEARTLT*VVTLQA
Trigger: AGCCTGGAGCGTCACCACCAAAGTCAAAGTTCTAGC...TTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCCTTTGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCATGCGCCGGTGGTTCTaGAGTGACATGAGGTTTGAG +
Preference number: 5 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFMRRWF*SDMRFE
Trigger: CTCAAACCTCATGTCACTCAAGAACCACCGGCGCAT...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAATGCGCCGGTGGTTCTaGAGTGACATGAGGTTTGAG +
Preference number: 5 (lower is better)
Translates to: LALSAFWQSLALENHGDKMRRWF*SDMRFE
Trigger: CTCAAACCTCATGTCACTCAAGAACCACCGGCGCAT...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp CTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAATGGGCAGTAGTGTGGTaGTGGATCTCAGTGGTCACA +
Preference number: 5 (lower is better)
Translates to: LALSAFWQSLALENHGDKWAVVW*WISVVT
Trigger: TGTGACCACTGAGATCCACAACCACACTACTGCCCA...TTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GGGCACAGACATGAAGACTACCTCATGCCCTTCTTGGGGGAAAAAGCCAGATTATGGGCAGTAGTGTGGTaGTGGATCTCAGTGGTCACA +
Preference number: 5 (lower is better)
Translates to: GHRHEDYLMPFLGEKARLWAVVW*WISVVT
Trigger: TGTGACCACTGAGATCCACAACCACACTACTGCCCA...TAATCTGGCTTTTTCCCCCAAGAAGGGCATGAGGTAGTCTTCATGTCTGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GTTACAGTTCTCAGGAACCATCACCACTATCCTGTCCTTCCCAGTCAAGCTCTGCAAAAGGGACGCTCCTaGTCTTCAGCTGCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: VTVLRNHHHYPVLPSQALQKGRS*SSAAGK
Trigger: TTTCCCAGCAGCTGAAGACAAGGAGCGTCCCTTTTG...CAGAGCTTGACTGGGAAGGACAGGATAGTGGTGATGGTTCCTGAGAACTGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS TCA 90 bp CATTCCACAAATGCTACACACCTGTGGCACTGTCCTATCTGCCATTaGGGGGTTACTGGTGGCCTCTTCTTCACGTTTGCATGCATGTTC +
Preference number: 5 (lower is better)
Translates to: HSTNATHLWHCPICH*GVTGGLFFTFACMF
Trigger: GAACATGCATGCAAACGTGAAGAAGAGGCCACCAGTAACCCCTCAATGGCAGATAGGACAGTGCCACAGGTGTGTAGCATTTGTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 90 bp GAAGTCTCCTGTCTGATGGGTCTGCCTATGGTTAATAAGGCTGCCTaGGTGGCGATAGCTCTTGCCACAGTCTTGGCAAGCAAATGTTCT +
Preference number: 5 (lower is better)
Translates to: EVSCLMGLPMVNKAA*VAIALATVLASKCS
Trigger: AGAACATTTGCTTGCCAAGACTGTGGCAAGAGCTATCGCCACTCAGGCAGCCTTATTAACCATAGGCAGACCCATCAGACAGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCAAGCCTTGTCTTTGTTaGGTAGGTGGATCTTCCCAC +
Preference number: 5 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLKPCLC*VGGSSH
Trigger: GTGGGAAGATCCACCTACCAAACAAAGACAAGGCTT...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR CAA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCTCCCACTGGATCATGTaGTTCTTTCTTGACAGGGCT +
Preference number: 5 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLSHWIM*FFLDRA
Trigger: AGCCCTGTCAAGAAAGAACAACATGATCCAGTGGGA...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp CTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCCATCCCTTTCCAGGTaGTCTTCAGTTTCACAAGGA +
Preference number: 5 (lower is better)
Translates to: LGENLALSAFWQSLALENPSLSR*SSVSQG
Trigger: TCCTTGTGAAACTGAAGACAACCTGGAAAGGGATGG...ATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTCCTATTGCTAGAACTTaGACTTTGGTGGTGACGCTC +
Preference number: 5 (lower is better)
Translates to: WFSLICLSLGENLALSAFPIART*TLVVTL
Trigger: GAGCGTCACCACCAAAGTCAAAGTTCTAGCAATAGG...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TCAGAGACAAACTATAGGGGGAGGAGACAGAAGAATGAGCATTGGCCAGTGACCTTGTCCTCTGTCTCCTaGACTCCCATCTACTTTCCC +
Preference number: 5 (lower is better)
Translates to: SETNYRGRRQKNEHWPVTLSSVS*TPIYFP
Trigger: GGGAAAGTAGATGGGAGTCAAGGAGACAGAGGACAA...GGTCACTGGCCAATGCTCATTCTTCTGTCTCCTCCCCCTATAGTTTGTCTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATAGAACCCAGGCACCATaGTGGTTCATTTGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: FGRVWPWKIMVTKGWEGDRTQAP*WFICPL
Trigger: CAGAGGACAAATGAACCACAATGGTGCCTGGGTTCT...ATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp CTGGGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATACAGTGTCTTCCAACTaGCCTTCTGGCTTGGTTAAC +
Preference number: 5 (lower is better)
Translates to: LGENLALSAFWQSLALENTVSSN*PSGLVN
Trigger: GTTAACCAAGCCAGAAGGCAAGTTGGAAGACACTGT...ATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp AGGCAGCTTTCGCACCAGTGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATTGGGACTCACACACTTaGCTACAATTACTACAAGCA +
Preference number: 5 (lower is better)
Translates to: RQLSHQWFSLICLSLGENWDSHT*LQLLQA
Trigger: TGCTTGTAGTAATTGTAGCAAAGTGTGTGAGTCCCA...ATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCACTGGTGCGAAAGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 90 bp GGCCTCTTCTTCACGTTTGCATGCATGTTCCTCATCTCCGTGGAATaGTGCTTCCATTCCCACTGGATCATGTTGTTCTTTCTTGACAGG +
Preference number: 5 (lower is better)
Translates to: GLFFTFACMFLISVE*CFHSHWIMLFFLDR
Trigger: CCTGTCAAGAAAGAACAACATGATCCAGTGGGAATGGAAGCAGCATTCCACGGAGATGAGGAACATGCATGCAAACGTGAAGAAGAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 90 bp GCTTCCTCCCTTTTAAGCACACATTCGTTGCCTCTAGATCCAGCCTaGAAACAGTCCCCATCCCTTTCCAGGTTGTCTTCAGTTTCACAA +
Preference number: 5 (lower is better)
Translates to: ASSLLSTHSLPLDPA*KQSPSLSRLSSVSQ
Trigger: TTGTGAAACTGAAGACAACCTGGAAAGGGATGGGGACTGTTTGCAGGCTGGATCTAGAGGCAACGAATGTGTGCTTAAAAGGGAGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 90 bp CTGGTGGCCTCTTCTTCACGTTTGCATGCATGTTCCTCATCTCCGTaGAATGCTGCTTCCATTCCCACTGGATCATGTTGTTCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: LVASSSRLHACSSSP*NAASIPTGSCCSFL
Trigger: CAAGAAAGAACAACATGATCCAGTGGGAATGGAAGCAGCATTCCACGGAGATGAGGAACATGCATGCAAACGTGAAGAAGAGGCCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATCATGTTGTTCTTTCTaGACAGGGCTGGGTGAACCT +
Preference number: 5 (lower is better)
Translates to: FWQSLALENHGDKGLGRRSCCSF*TGLGEP
Trigger: AGGTTCACCCAGCCCTGTCAAGAAAGAACAACATGA...TCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGATTCCCACTGGATCATGTaGTTCTTTCTTGACAGGGCT +
Preference number: 5 (lower is better)
Translates to: FGRVWPWKIMVTKGWEGDSHWIM*FFLDRA
Trigger: AGCCCTGTCAAGAAAGAACAACATGATCCAGTGGGA...ATCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGCCTCTTCTTCACGTTaGCATGCATGTTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: GENLALSAFWQSLALENHASSSR*HACSSS
Trigger: AGATGAGGAACATGCATGCAAACGTGAAGAAGAGGC...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp AGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCATGCCCTTCGCTCTTGCCACAGTCTaGGCAAGCAAATGTTCTAGT +
Preference number: 5 (lower is better)
Translates to: RRSFILHGHRHEDYLMPFALATV*ASKCSS
Trigger: ACTAGAACATTTGCTTGCCAAGACTGTGGCAAGAGC...GAAGGGCATGAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTCCATCCCTTTCCAGGTaGTCTTCAGTTTCACAAGGA +
Preference number: 5 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGPSLSR*SSVSQG
Trigger: TCCTTGTGAAACTGAAGACAACCTGGAAAGGGATGG...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp TTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTTGGGAAGGAGACCTATTGCTAGAACTTaGACTTTGGTGGTGACGCTC +
Preference number: 5 (lower is better)
Translates to: FWQSLALENHGDKGLGRRPIART*TLVVTL
Trigger: GAGCGTCACCACCAAAGTCAAAGTTCTAGCAATAGG...TCTCCTTCCCAACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GATTCTCAGATGCTCACTGAAAGAAAACAGCCATTCCTCCTTGGTTATATAAGAGCCTTCTGTAGCATGTaGGCCTCCCTGGCCACTGGC +
Preference number: 5 (lower is better)
Translates to: DSQMLTERKQPFLLGYIRAFCSM*ASLATG
Trigger: GCCAGTGGCCAGGGAGGCCAACATGCTACAGAAGGC...TCTTATATAACCAAGGAGGAATGGCTGTTTTCTTTCAGTGAGCATCTGAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp CTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATGGTGACAAAGGGTACCATTGTGGTTCATTaGTCCTCTGTCTCCTTGACT +
Preference number: 5 (lower is better)
Translates to: LSLHFGRVWPWKIMVTKGTIVVH*SSVSLT
Trigger: AGTCAAGGAGACAGAGGACAAATGAACCACAATGGT...ACCCTTTGTCACCATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GGTGAGAATCTGGCTCTCTCTGCATTTTGGCAGAGTCTGGCCCTGGAAAATCATACCATTGTGGTTCATTaGTCCTCTGTCTCCTTGACT +
Preference number: 5 (lower is better)
Translates to: GENLALSAFWQSLALENHTIVVH*SSVSLT
Trigger: AGTCAAGGAGACAGAGGACAAATGAACCACAATGGT...ATGATTTTCCAGGGCCAGACTCTGCCAAAATGCAGAGAGAGCCAGATTCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCGGATTCAAGAACTCTTaGGAACAGAGCAGACAAATG +
Preference number: 5 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLGFKNS*EQSRQM
Trigger: CATTTGTCTGCTCTGTTCCAAAGAGTTCTTGAATCC...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCTGGGACTCACACACTTaGCTACAATTACTACAAGCA +
Preference number: 5 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLWDSHT*LQLLQA
Trigger: TGCTTGTAGTAATTGTAGCAAAGTGTGTGAGTCCCA...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 90 bp TTGCTACAATTACTACAAGCAAAGCGCTGGGCAGTAGTGTGGTTGTaGATCTCAGTGGTCACAGGATTCAAGAACTCTTTGGAACAGAGC +
Preference number: 5 (lower is better)
Translates to: LLQLLQAKRWAVVWL*ISVVTGFKNSLEQS
Trigger: GCTCTGTTCCAAAGAGTTCTTGAATCCTGTGACCACTGAGATCCACAACCACACTACTGCCCAGCGCTTTGCTTGTAGTAATTGTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GGGTTGGGAAGGAGATCCTTCATCCTTCATGGGCACAGACATGAAGACTACCTCAAATACTGTTCCAAATaGCTAAGAAGGTTGCTCGCT +
Preference number: 5 (lower is better)
Translates to: GLGRRSFILHGHRHEDYLKYCSK*LRRLLA
Trigger: AGCGAGCAACCTTCTTAGCAATTTGGAACAGTATTT...GAGGTAGTCTTCATGTCTGTGCCCATGAAGGATGAAGGATCTCCTTCCCAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS-3UTR CAA 90 bp TGGTTCTCTCTGATCTGCCTCTCCCTGGGTGAGAATCTGGCTCTCTCTGCATTTGAGAATCAAATTCCTTaGGACAGAGAGAGCATTGAT +
Preference number: 5 (lower is better)
Translates to: WFSLICLSLGENLALSAFENQIP*DRESID
Trigger: ATCAATGCTCTCTCTGTCCAAAGGAATTTGATTCTC...AAATGCAGAGAGAGCCAGATTCTCACCCAGGGAGAGGCAGATCAGAGAGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS-3UTR CAA 90 bp GATTCTCAGATGCTCACTGAAAGAAAACAGCCATTCCTCCTTGGTTATATAAGAAGGTTAGGCAGAAGTTaGGGACACAGGGAACAGGGG +
Preference number: 5 (lower is better)
Translates to: DSQMLTERKQPFLLGYIRRLGRS*GHREQG
Trigger: CCCCTGTTCCCTGTGTCCCAAACTTCTGCCTAACCT...TCTTATATAACCAAGGAGGAATGGCTGTTTTCTTTCAGTGAGCATCTGAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS CCA 72 bp GCCCCTCATGGGACTGCTGATGTTCCAGCAGATCCCTaGGGAGCCGAAAGGCACGGGGGCAGTGAGGACAGT +
Preference number: 6 (lower is better)
Translates to: APHGTADVPADP*GAERHGGSEDS
Trigger: ACTGTCCTCACTGCCCCCGTGCCTTTCGGCTCCCCAGGGATCTGCTGGAACATCAGCAGTCCCATGAGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
ENSMUST00000206340.2
CDS CCA 72 bp CCAGCTTCAGGGTCCAGGCGCCCCCAGGTGGGAGCGTaGCTACTTCCCCTGTACCACTATCTTGCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: PASGSRRPQVGA*LLPLYHYLASA
Trigger: GGCAGAAGCAAGATAGTGGTACAGGGGAAGTAGCCACGCTCCCACCTGGGGGCGCCTGGACCCTGAAGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp GTGGCGGAAGCGGCGAGGACAATGAGAACAGGTGAATaGTCCCTCCTGGGGTGCATGGACCCGTCCATGGCC +
Preference number: 6 (lower is better)
Translates to: VAEAARTMRTGE*SLLGCMDPSMA
Trigger: GGCCATGGACGGGTCCATGCACCCCAGGAGGGACCATTCACCTGTTCTCATTGTCCTCGCCGCTTCCGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 72 bp GCTCCTGAGCTCGACACTGGCCACTCTTCCTGGTGCTaGTGCTGGTGTCGCAGAAAGCTGATTCGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: APELDTGHSSWC*CWCRRKLIRWR
Trigger: CCGCCACCGAATCAGCTTTCTGCGACACCAGCAGCAGCACCAGGAAGAGTGGCCAGTGTCGAGCTCAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050383.8
CDS CCA 72 bp CTCACTCCCAAGGTGTGGAGCGGTTTCCATGGCATGTaGAGGCCCGTGCCTTCGGTGGCTCTCAGGAGCATG +
Preference number: 6 (lower is better)
Translates to: LTPKVWSGFHGM*RPVPSVALRSM
Trigger: CATGCTCCTGAGAGCCACCGAAGGCACGGGCCTCCACATGCCATGGAAACCGCTCCACACCTTGGGAGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS CCA 72 bp GTGTCAGCGTCAGCAGGGTGGGAGGAGGAGTCAGAGTaGCAGATGCCCCTCTTCCGGTCACTGTCCATCCCA +
Preference number: 6 (lower is better)
Translates to: VSASAGWEEESE*QMPLFRSLSIP
Trigger: TGGGATGGACAGTGACCGGAAGAGGGGCATCTGCCACTCTGACTCCTCCTCCCACCCTGCTGACGCTGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp GATCATACCGCACAGGCAGCAGAGGAAGGGCTGTGCTaGGGCTACCTCTCCTGGCCGATGGGTCTGGAAGTG +
Preference number: 6 (lower is better)
Translates to: DHTAQAAEEGLC*GYLSWPMGLEV
Trigger: CACTTCCAGACCCATCGGCCAGGAGAGGTAGCCTCAGCACAGCCCTTCCTCTGCTGCCTGTGCGGTATGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp TGGCACCCCATTCTCCTCTGGGTCTCCAGGAAGTTCTaGTGGGGCCTCCTGAGCTTTCCCTGGACCAGGAGG +
Preference number: 6 (lower is better)
Translates to: WHPILLWVSRKF*WGLLSFPWTRR
Trigger: CCTCCTGGTCCAGGGAAAGCTCAGGAGGCCCCATCAGAACTTCCTGGAGACCCAGAGGAGAATGGGGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp TTCGGTGGCGGAAGCGGCGAGGACAATGAGAACAGGTaGATGGTCCCTCCTGGGGTGCATGGACCCGTCCAT +
Preference number: 6 (lower is better)
Translates to: FGGGSGEDNENR*MVPPGVHGPVH
Trigger: ATGGACGGGTCCATGCACCCCAGGAGGGACCATTCACCTGTTCTCATTGTCCTCGCCGCTTCCGCCACCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 72 bp GGTTCCTCTGATGGTTGGCCAAGTTCTCCGGGTGACTaGCATAGGGGTGAGGGATGCCATCGGCTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: GSSDGWPSSPGD*HRGEGCHRLPP
Trigger: GGGAGGAAGCCGATGGCATCCCTCACCCCTATGGCAGTCACCCGGAGAACTTGGCCAACCATCAGAGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS CCA 72 bp CCAGGAGTCAGTAGCCATGGTCTCACTCCCAAGGTGTaGAGCGGTTTCCATGGCATGTGGAGGCCCGTGCCT +
Preference number: 6 (lower is better)
Translates to: PGVSSHGLTPKV*SGFHGMWRPVP
Trigger: AGGCACGGGCCTCCACATGCCATGGAAACCGCTCCACACCTTGGGAGTGAGACCATGGCTACTGACTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS CCA 72 bp GCCAGCTCCTCCAAGGGCTCCACTTTAAGCTCTTCCTaGAGTTGCCCTATGACAGCCTGCTCCTGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: ASSSKGSTLSSS*SCPMTACSCPA
Trigger: GGCAGGGCAGGAGCAGGCTGTCATAGGGCAACTCCAGGAAGAGCTTAAAGTGGAGCCCTTGGAGGAGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp CTACTCCTGCGTCGCTCAGCATGGACTCGCTGGTGGTaGGCCAGCTGCTTTCGCAGGCGAAAGGCTTTCCCA +
Preference number: 6 (lower is better)
Translates to: LLLRRSAWTRWW*ASCFRRRKAFP
Trigger: TGGGAAAGCCTTTCGCCTGCGAAAGCAGCTGGCCAACCACCAGCGAGTCCATGCTGAGCGACGCAGGAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp ATTGCTAAGAAGGTTGCTCGCTGGAGTGGGGAGTGGTaGTGCTCCTTCGGAACTGACGGCGGGCACCCAGTC +
Preference number: 6 (lower is better)
Translates to: IAKKVARWSGEW*CSFGTDGGHPV
Trigger: GACTGGGTGCCCGCCGTCAGTTCCGAAGGAGCATCACCACTCCCCACTCCAGCGAGCAACCTTCTTAGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS TCA 72 bp GGTAGATGCCCAGAGTGTGACTCTGGCGGTGGTTGGTaGGGCTCCCGGCATGCTTATAGGTCTTCCCGCACT +
Preference number: 6 (lower is better)
Translates to: GRCPECDSGGGW*GSRHAYRSSRT
Trigger: AGTGCGGGAAGACCTATAAGCATGCCGGGAGCCTCACCAACCACCGCCAGAGTCACACTCTGGGCATCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
ENSMUST00000206340.2
CDS TCA 72 bp CTTCTGGTGGTTCAGCAGGCTACCGGCATGGCGGTATaGACGCCCACACTGAGCACAGCAAAAGGGACGCTC +
Preference number: 6 (lower is better)
Translates to: LLVVQQATGMAV*TPTLSTAKGTL
Trigger: GAGCGTCCCTTTTGCTGTGCTCAGTGTGGGCGTTCATACCGCCATGCCGGTAGCCTGCTGAACCACCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 72 bp ATACCTGAGCTCGACACTGGCCACTCTTCCTGGTGCTaGTGCTGGTGTCGCAGAAAGCTGATTCGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: IPELDTGHSSWC*CWCRRKLIRWR
Trigger: CCGCCACCGAATCAGCTTTCTGCGACACCAGCAGCAGCACCAGGAAGAGTGGCCAGTGTCGAGCTCAGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS CCA 72 bp AGTGACATGAGGTTTGAGAAACCCTTGGAGCAGGCCTaGCAGCCAAAGTGGCCAGTCTGGTGGCTCTGCCGG +
Preference number: 6 (lower is better)
Translates to: SDMRFEKPLEQA*QPKWPVWWLCR
Trigger: CCGGCAGAGCCACCAGACTGGCCACTTTGGCTGCCAGGCCTGCTCCAAGGGTTTCTCAAACCTCATGTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 90 bp CTGCAGCGGAACTGTCGAGGGTCTGCATGGATGCGCCGGTGGTTCTaGAGTGACATGAGGTTTGAGAAACCCTTGGAGCAGGCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: LQRNCRGSAWMRRWF*SDMRFEKPLEQAWQ
Trigger: CTGCCAGGCCTGCTCCAAGGGTTTCTCAAACCTCATGTCACTCAAGAACCACCGGCGCATCCATGCAGACCCTCGACAGTTCCGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp TCTGTGCCTCCTGAACACGCTGGGCTACTGGGACTCTaGCTGTGTCCCCCAGGCCTCTTGGTTTCATGTTCC +
Preference number: 6 (lower is better)
Translates to: SVPPEHAGLLGL*LCPPGLLVSCS
Trigger: GGAACATGAAACCAAGAGGCCTGGGGGACACAGTCAGAGTCCCAGTAGCCCAGCGTGTTCAGGAGGCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp ACTCTTCCTGGTGCTGCTGCTGGTGTCGCAGAAAGCTaGTTCGGTGGCGGAAGCGGCGAGGACAATGAGAAC +
Preference number: 6 (lower is better)
Translates to: TLPGAAAGVAES*FGGGSGEDNEN
Trigger: GTTCTCATTGTCCTCGCCGCTTCCGCCACCGAATCAGCTTTCTGCGACACCAGCAGCAGCACCAGGAAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp CCTGGATCCTCTCAATCCTCTGCCCAACCACATACCTaGGCTCGACACTGGCCACTCTTCCTGGTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: PGSSQSSAQPHT*ARHWPLFLVLL
Trigger: CAGCAGCACCAGGAAGAGTGGCCAGTGTCGAGCTCAGGTATGTGGTTGGGCAGAGGATTGAGAGGATCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206340.2
CDS GCA 72 bp CCGTCCTGCTTAGCAGATGAATGGCGCAGTTCTCGATaGCGTGCCAGTTCTGGGAGGTTAGGAAAGTGGCGC +
Preference number: 6 (lower is better)
Translates to: PSCLADEWRSSR*RASSGRLGKWR
Trigger: GCGCCACTTTCCTAACCTCCCAGAACTGGCACGGCATCGAGAACTGCGCCATTCATCTGCTAAGCAGGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS GCA 72 bp CTTCTGAGATGGGCCCCATTTGGGGCTCTGAGCCTTTaGAGCGAGGGTGATTCCGCAGATGATTCCGGTAGG +
Preference number: 6 (lower is better)
Translates to: LLRWAPFGALSL*SEGDSADDSGR
Trigger: CCTACCGGAATCATCTGCGGAATCACCCTCGCTGCAAAGGCTCAGAGCCCCAAATGGGGCCCATCTCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp GTGTGGATTCTGTGCCTCCTGAACACGCTGGGCTACTaGGACTCTGACTGTGTCCCCCAGGCCTCTTGGTTT +
Preference number: 6 (lower is better)
Translates to: VWILCLLNTLGY*DSDCVPQASWF
Trigger: AAACCAAGAGGCCTGGGGGACACAGTCAGAGTCCCAGTAGCCCAGCGTGTTCAGGAGGCACAGAATCCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp GAGGACCCACCTCTGCCATCCCAGCCTGTGGACCTCTaGTCTTCTCCATCTGACCTGACATCTGACTGTGCT +
Preference number: 6 (lower is better)
Translates to: EDPPLPSQPVDL*SSPSDLTSDCA
Trigger: AGCACAGTCAGATGTCAGGTCAGATGGAGAAGACCAGAGGTCCACAGGCTGGGATGGCAGAGGTGGGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp GAAGTTTGGGACACAGGGAACAGGGGTAGAGTCCAATaGTGTGGGCCTTCTGGTGGTTCAGCAGGCTACCGG +
Preference number: 6 (lower is better)
Translates to: EVWDTGNRGRVQ*CGPSGGSAGYR
Trigger: CCGGTAGCCTGCTGAACCACCAGAAGGCCCACACCATTGGACTCTACCCCTGTTCCCTGTGTCCCAAACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp TCCATCCCAGGGAGGCCACCACAGAAGCCAGTTTCATaGCACTCATCACCTGGGGTGCCTAGGTCGTCAAGG +
Preference number: 6 (lower is better)
Translates to: SIPGRPPQKPVS*HSSPGVPRSSR
Trigger: CCTTGACGACCTAGGCACCCCAGGTGATGAGTGCAATGAAACTGGCTTCTGTGGTGGCCTCCCTGGGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 90 bp CTGGGTGAACCTTCAGTCCCTGGATCTGTACTTCGGCGTGTAGCCTaGCAATGTACCCGCACATGGTTGCGCAGAGCCATAAGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: LGEPSVPGSVLRRVA*QCTRTWLRRAIRLG
Trigger: CCCCAACCTTATGGCTCTGCGCAACCATGTGCGGGTACATTGCAAGGCTACACGCCGAAGTACAGATCCAGGGACTGAAGGTTCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp TTGTCTTTGTTTGGTAGGTGGATCTTCCCACGTCCCTaGCGCTGCCCTGGGGTCAGCTCCAGATTCCCAGTC +
Preference number: 6 (lower is better)
Translates to: LSLFGRWIFPRP*RCPGVSSRFPV
Trigger: GACTGGGAATCTGGAGCTGACCCCAGGGCAGCGTCAGGGACGTGGGAAGATCCACCTACCAAACAAAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS TCA 72 bp CATGGTTGTTCCTGCTTTAGCCCCTCATGGGACTGCTaGTGTTCCAGCAGATCCCTGGGGAGCCGAAAGGCA +
Preference number: 6 (lower is better)
Translates to: HGCSCFSPSWDC*CSSRSLGSRKA
Trigger: TGCCTTTCGGCTCCCCAGGGATCTGCTGGAACATCAGCAGTCCCATGAGGGGCTAAAGCAGGAACAACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
ENSMUST00000206340.2
CDS TCA 72 bp CCACACTGGCTGCAGCAGTGGCTTTCTGGTTGGAGTTaGGAGCCGCTGTCAGCACCTTTCCAACTATCCCTG +
Preference number: 6 (lower is better)
Translates to: PHWLQQWLSGWS*EPLSAPFQLSL
Trigger: CAGGGATAGTTGGAAAGGTGCTGACAGCGGCTCTCAACTCCAACCAGAAAGCCACTGCTGCAGCCAGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 72 bp GAGGGTGGGACTCCAGAAAGCTTTCACCAGCCTGCATaGAAAGGCTGTCTGCAACTGTGCCACCTACTCCCT +
Preference number: 6 (lower is better)
Translates to: EGGTPESFHQPA*KGCLQLCHLLP
Trigger: AGGGAGTAGGTGGCACAGTTGCAGACAGCCTTTGCATGCAGGCTGGTGAAAGCTTTCTGGAGTCCCACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 72 bp CCCTGGCCACTGGCTACCTCTAGTTTGGTGTCCTCATaGTCCTGTAGATGCTGCTCTAGAGATCCCTGGCCA +
Preference number: 6 (lower is better)
Translates to: PWPLATSSLVSS*SCRCCSRDPWP
Trigger: TGGCCAGGGATCTCTAGAGCAGCATCTACAGGAGCATGAGGACACCAAACTAGAGGTAGCCAGTGGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 72 bp CTGTGTCCCCCAGGCCTCTTGGTTTCATGTTCCACCTaGAGTACCTCAGTACCATCTGACCTGCCCTCCAGT +
Preference number: 6 (lower is better)
Translates to: LCPPGLLVSCST*STSVPSDLPSS
Trigger: ACTGGAGGGCAGGTCAGATGGTACTGAGGTACTGCAGGTGGAACATGAAACCAAGAGGCCTGGGGGACACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 72 bp TCCCATCTACTTTCCCCACCTGCTGTGTGGATTCTGTaGCTCCTGAACACGCTGGGCTACTGGGACTCTGAC +
Preference number: 6 (lower is better)
Translates to: SHLLSPPAVWIL*LLNTLGYWDSD
Trigger: GTCAGAGTCCCAGTAGCCCAGCGTGTTCAGGAGGCACAGAATCCACACAGCAGGTGGGGAAAGTAGATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp CGCTCCCCCTCAGTAGGAAGAGGCTCAGTGGGCTCCTaGGCCTCTGTGAAGTTCACTACTGATTCAGCCAAA +
Preference number: 6 (lower is better)
Translates to: RSPSVGRGSVGS*ASVKFTTDSAK
Trigger: TTTGGCTGAATCAGTAGTGAACTTCACAGAGGCCCAGGAGCCCACTGAGCCTCTTCCTACTGAGGGGGAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS CCA 72 bp GGGAGAAAGAATCTCCACAGTCAGAACAGGTGTGAGTaGCTGCGGCCTTCCAGACAGTGTCAGCGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: GRKNLHSQNRCE*LRPSRQCQRQQ
Trigger: CTGCTGACGCTGACACTGTCTGGAAGGCCGCAGCCACTCACACCTGTTCTGACTGTGGAGATTCTTTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp CCACACTCACTGCAGCGGAACTGTCGAGGGTCTGCATaGATGCGCCGGTGGTTCTTGAGTGACATGAGGTTT +
Preference number: 6 (lower is better)
Translates to: PHSLQRNCRGSA*MRRWFLSDMRF
Trigger: AAACCTCATGTCACTCAAGAACCACCGGCGCATCCATGCAGACCCTCGACAGTTCCGCTGCAGTGAGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp CTCCTTGACTCCCATCTACTTTCCCCACCTGCTGTGTaGATTCTGTGCCTCCTGAACACGCTGGGCTACTGG +
Preference number: 6 (lower is better)
Translates to: LLDSHLLSPPAV*ILCLLNTLGYW
Trigger: CCAGTAGCCCAGCGTGTTCAGGAGGCACAGAATCCACACAGCAGGTGGGGAAAGTAGATGGGAGTCAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp GCCACACTGGCTGCAGCAGTGGCTTTCTGGTTGGAGTaGAGAGCCGCTGTCAGCACCTTTCCAACTATCCCT +
Preference number: 6 (lower is better)
Translates to: ATLAAAVAFWLE*RAAVSTFPTIP
Trigger: AGGGATAGTTGGAAAGGTGCTGACAGCGGCTCTCAACTCCAACCAGAAAGCCACTGCTGCAGCCAGTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp GGTACAACGTACAGCTGCTGCCCTCTGGGGACATCCTaGCTGTCGCCGCTGTTGACTATCAGAATGTACCCT +
Preference number: 6 (lower is better)
Translates to: GTTYSCCPLGTS*LSPLLTIRMYP
Trigger: AGGGTACATTCTGATAGTCAACAGCGGCGACAGTCAGGATGTCCCCAGAGGGCAGCAGCTGTACGTTGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 72 bp TACAGCGGTCCCCTCCCACACTTCTTCTTTGACACCTaGCAGCTCCTCCAAGGGCTCCACTTTAAGCTCTTC +
Preference number: 6 (lower is better)
Translates to: YSGPLPHFFFDT*QLLQGLHFKLF
Trigger: GAAGAGCTTAAAGTGGAGCCCTTGGAGGAGCTGGCAGGTGTCAAAGAAGAAGTGTGGGAGGGGACCGCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp AGCAGCTCTGCTTCTGAGAGTTGCAGGGGAGGACTATaGGTAGAGGCTGTTTCTGCTGTGCCTTCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: SSSASESCRGGL*VEAVSAVPSSS
Trigger: AGAGGAGGAAGGCACAGCAGAAACAGCCTCTACCCATAGTCCTCCCCTGCAACTCTCAGAAGCAGAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp CAGCGGAACTGTCGAGGGTCTGCATGGATGCGCCGGTaGTTCTTGAGTGACATGAGGTTTGAGAAACCCTTG +
Preference number: 6 (lower is better)
Translates to: QRNCRGSAWMRR*FLSDMRFEKPL
Trigger: CAAGGGTTTCTCAAACCTCATGTCACTCAAGAACCACCGGCGCATCCATGCAGACCCTCGACAGTTCCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp CCTTCAGTCCCTGGATCTGTACTTCGGCGTGTAGCCTaGCAATGTACCCGCACATGGTTGCGCAGAGCCATA +
Preference number: 6 (lower is better)
Translates to: PSVPGSVLRRVA*QCTRTWLRRAI
Trigger: TATGGCTCTGCGCAACCATGTGCGGGTACATTGCAAGGCTACACGCCGAAGTACAGATCCAGGGACTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp CAGAGCCATAAGGTTGGGGTATTTTCGAGGACAAAGTaGACACTGGTACTCTCCTGTCCGGTGGCTGTGGCG +
Preference number: 6 (lower is better)
Translates to: QSHKVGVFSRTK*TLVLSCPVAVA
Trigger: CGCCACAGCCACCGGACAGGAGAGTACCAGTGTTCACTTTGTCCTCGAAAATACCCCAACCTTATGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
ENSMUST00000206340.2
CDS TCA 72 bp TGCTTGGCACAGGCCCCACAACTGAAGTCTCCTGTCTaGTGGGTCTGCCTATGGTTAATAAGGCTGCCTGAG +
Preference number: 6 (lower is better)
Translates to: CLAQAPQLKSPV*WVCLWLIRLPE
Trigger: CTCAGGCAGCCTTATTAACCATAGGCAGACCCATCAGACAGGAGACTTCAGTTGTGGGGCCTGTGCCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp GGTTTCATGTTCCACCTGCAGTACCTCAGTACCATCTaGCCTGCCCTCCAGTCCCCAGTCATCAAGGTTCTC +
Preference number: 6 (lower is better)
Translates to: GFMFHLQYLSTI*PALQSPVIKVL
Trigger: GAGAACCTTGATGACTGGGGACTGGAGGGCAGGTCAGATGGTACTGAGGTACTGCAGGTGGAACATGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp CATTACACTTATAGGGACGATGGTCCAGGCTGGCAGTaGGGACCTCGTCCACTTTTGGAGTATTCTCGGCTG +
Preference number: 6 (lower is better)
Translates to: HYTYRDDGPGWQ*GPRPLLEYSRL
Trigger: CAGCCGAGAATACTCCAAAAGTGGACGAGGTCCCCACTGCCAGCCTGGACCATCGTCCCTATAAGTGTAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
ENSMUST00000206340.2
CDS CCA 72 bp GTCTTGCCACACTGGTTACATTGGAAAGGGCGAGGGTaGGACTCCAGAAAGCTTTCACCAGCCTGCATGCAA +
Preference number: 6 (lower is better)
Translates to: VLPHWLHWKGRG*DSRKLSPACMQ
Trigger: TTGCATGCAGGCTGGTGAAAGCTTTCTGGAGTCCCACCCTCGCCCTTTCCAATGTAACCAGTGTGGCAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp CGGGAACAGACAGGACAGATGAAATCACCTGTCTGGTaGATCTTTCGGTGGTTTACCAAGCTGCCTCCGTGG +
Preference number: 6 (lower is better)
Translates to: REQTGQMKSPVW*IFRWFTKLPPW
Trigger: CCACGGAGGCAGCTTGGTAAACCACCGAAAGATCCACCAGACAGGTGATTTCATCTGTCCTGTCTGTTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp CAGCGGGAACAGACAGGACAGATGAAATCACCTGTCTaGTGGATCTTTCGGTGGTTTACCAAGCTGCCTCCG +
Preference number: 6 (lower is better)
Translates to: QREQTGQMKSPV*WIFRWFTKLPP
Trigger: CGGAGGCAGCTTGGTAAACCACCGAAAGATCCACCAGACAGGTGATTTCATCTGTCCTGTCTGTTCCCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp CTTCGGCGTGTAGCCTTGCAATGTACCCGCACATGGTaGCGCAGAGCCATAAGGTTGGGGTATTTTCGAGGA +
Preference number: 6 (lower is better)
Translates to: LRRVALQCTRTW*RRAIRLGYFRG
Trigger: TCCTCGAAAATACCCCAACCTTATGGCTCTGCGCAACCATGTGCGGGTACATTGCAAGGCTACACGCCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp AACTGTCGAGGGTCTGCATGGATGCGCCGGTGGTTCTaGAGTGACATGAGGTTTGAGAAACCCTTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: NCRGSAWMRRWF*SDMRFEKPLEQ
Trigger: CTGCTCCAAGGGTTTCTCAAACCTCATGTCACTCAAGAACCACCGGCGCATCCATGCAGACCCTCGACAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 90 bp CCCCAACTCCTCTCATCTGCGTGTCCATTTGTGGTAGGCATCTCTTaGTCTTCCCATGGTTGTTCCTGCTTTAGCCCCTCATGGGACTGC +
Preference number: 6 (lower is better)
Translates to: PQLLSSACPFVVGIS*SSHGCSCFSPSWDC
Trigger: GCAGTCCCATGAGGGGCTAAAGCAGGAACAACCATGGGAAGACAAAGAGATGCCTACCACAAATGGACACGCAGATGAGAGGAGTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
ENSMUST00000206340.2
CDS CAA 90 bp TCGAAGGGCAGGCAGAGAATCAAATTCCTTTGGACAGAGAGAGCATaGATAGATGCCTGGAGGGTGGCAGGACCTATGGCTCAACAGGCC +
Preference number: 6 (lower is better)
Translates to: SKGRQRIKFLWTERA*IDAWRVAGPMAQQA
Trigger: GGCCTGTTGAGCCATAGGTCCTGCCACCCTCCAGGCATCTATCAATGCTCTCTCTGTCCAAAGGAATTTGATTCTCTGCCTGCCCTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp TGTCTGATGGGTCTGCCTATGGTTAATAAGGCTGCCTaGGTGGCGATAGCTCTTGCCACAGTCTTGGCAAGC +
Preference number: 6 (lower is better)
Translates to: CLMGLPMVNKAA*VAIALATVLAS
Trigger: GCTTGCCAAGACTGTGGCAAGAGCTATCGCCACTCAGGCAGCCTTATTAACCATAGGCAGACCCATCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp CCCAGCCTGTGGACCTCTGGTCTTCTCCATCTGACCTaGCATCTGACTGTGCTCAACAGCATGAGTCTTCAT +
Preference number: 6 (lower is better)
Translates to: PSLWTSGLLHLT*HLTVLNSMSLH
Trigger: ATGAAGACTCATGCTGTTGAGCACAGTCAGATGTCAGGTCAGATGGAGAAGACCAGAGGTCCACAGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 72 bp ACCTCTAGTTTGGTGTCCTCATGCTCCTGTAGATGCTaGTCTAGAGATCCCTGGCCAGAAAAGCCACAGCCA +
Preference number: 6 (lower is better)
Translates to: TSSLVSSCSCRC*SRDPWPEKPQP
Trigger: TGGCTGTGGCTTTTCTGGCCAGGGATCTCTAGAGCAGCATCTACAGGAGCATGAGGACACCAAACTAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp ATAAGGTTGGGGTATTTTCGAGGACAAAGTGAACACTaGTACTCTCCTGTCCGGTGGCTGTGGCGGTGGTTC +
Preference number: 6 (lower is better)
Translates to: IRLGYFRGQSEH*YSPVRWLWRWF
Trigger: GAACCACCGCCACAGCCACCGGACAGGAGAGTACCAGTGTTCACTTTGTCCTCGAAAATACCCCAACCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
ENSMUST00000206340.2
CDS CCA 72 bp GTACTTCGGCGTGTAGCCTTGCAATGTACCCGCACATaGTTGCGCAGAGCCATAAGGTTGGGGTATTTTCGA +
Preference number: 6 (lower is better)
Translates to: VLRRVALQCTRT*LRRAIRLGYFR
Trigger: TCGAAAATACCCCAACCTTATGGCTCTGCGCAACCATGTGCGGGTACATTGCAAGGCTACACGCCGAAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp ACAAGGACTTTCTCCCAAAGGATCTTGGGAAGAATCTaGGTCCTCGTCGTTTTCCAGCTTCAGGGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: TRTFSQRILGRI*VLVVFQLQGPG
Trigger: GCCTGGACCCTGAAGCTGGAAAACGACGAGGACCCAGATTCTTCCCAAGATCCTTTGGGAGAAAGTCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp TCCTCATGCTCCTGTAGATGCTGCTCTAGAGATCCCTaGCCAGAAAAGCCACAGCCACATAGGGTACAACGT +
Preference number: 6 (lower is better)
Translates to: SSCSCRCCSRDP*PEKPQPHRVQR
Trigger: ACGTTGTACCCTATGTGGCTGTGGCTTTTCTGGCCAGGGATCTCTAGAGCAGCATCTACAGGAGCATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp AGCACAGCAAAAGGGACGCTCCTTGTCTTCAGCTGCTaGGAAATGTATTCCTTGTCCTCCGTTAGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: STAKGTLLVFSC*EMYSLSSVSWH
Trigger: GTGCCAGCTAACGGAGGACAAGGAATACATTTCCCAGCAGCTGAAGACAAGGAGCGTCCCTTTTGCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp GCCATTGAGGGGTTACTGGTGGCCTCTTCTTCACGTTaGCATGCATGTTCCTCATCTCCGTGGAATGCTGCT +
Preference number: 6 (lower is better)
Translates to: AIEGLLVASSSR*HACSSSPWNAA
Trigger: AGCAGCATTCCACGGAGATGAGGAACATGCATGCAAACGTGAAGAAGAGGCCACCAGTAACCCCTCAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp CCAGGCACCATTGTGGTTCATTTGTCCTCTGTCTCCTaGACTCCCATCTACTTTCCCCACCTGCTGTGTGGA +
Preference number: 6 (lower is better)
Translates to: PGTIVVHLSSVS*TPIYFPHLLCG
Trigger: TCCACACAGCAGGTGGGGAAAGTAGATGGGAGTCAAGGAGACAGAGGACAAATGAACCACAATGGTGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 90 bp GTACCTCCTTTAGAATCTGGCTGCATTTCTAAGCCTTGTCTTTGTTaGGTAGGTGGATCTTCCCACGTCCCTGACGCTGCCCTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: VPPLESGCISKPCLC*VGGSSHVPDAALGS
Trigger: TGACCCCAGGGCAGCGTCAGGGACGTGGGAAGATCCACCTACCAAACAAAGACAAGGCTTAGAAATGCAGCCAGATTCTAAAGGAGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS CAA 90 bp CCGTGGAATGCTGCTTCCATTCCCACTGGATCATGTTGTTCTTTCTaGACAGGGCTGGGTGAACCTTCAGTCCCTGGATCTGTACTTCGG +
Preference number: 6 (lower is better)
Translates to: PWNAASIPTGSCCSF*TGLGEPSVPGSVLR
Trigger: CCGAAGTACAGATCCAGGGACTGAAGGTTCACCCAGCCCTGTCAAGAAAGAACAACATGATCCAGTGGGAATGGAAGCAGCATTCCACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 90 bp GTCCTATCTGCCATTGAGGGGTTACTGGTGGCCTCTTCTTCACGTTaGCATGCATGTTCCTCATCTCCGTGGAATGCTGCTTCCATTCCC +
Preference number: 6 (lower is better)
Translates to: VLSAIEGLLVASSSR*HACSSSPWNAASIP
Trigger: GGGAATGGAAGCAGCATTCCACGGAGATGAGGAACATGCATGCAAACGTGAAGAAGAGGCCACCAGTAACCCCTCAATGGCAGATAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 90 bp CTGAAGAACCCAGGCACCATTGTGGTTCATTTGTCCTCTGTCTCCTaGACTCCCATCTACTTTCCCCACCTGCTGTGTGGATTCTGTGCC +
Preference number: 6 (lower is better)
Translates to: LKNPGTIVVHLSSVS*TPIYFPHLLCGFCA
Trigger: GGCACAGAATCCACACAGCAGGTGGGGAAAGTAGATGGGAGTCAAGGAGACAGAGGACAAATGAACCACAATGGTGCCTGGGTTCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 90 bp GTAGCCTTGCAATGTACCCGCACATGGTTGCGCAGAGCCATAAGGTaGGGGTATTTTCGAGGACAAAGTGAACACTGGTACTCTCCTGTC +
Preference number: 6 (lower is better)
Translates to: VALQCTRTWLRRAIR*GYFRGQSEHWYSPV
Trigger: GACAGGAGAGTACCAGTGTTCACTTTGTCCTCGAAAATACCCCAACCTTATGGCTCTGCGCAACCATGTGCGGGTACATTGCAAGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
ENSMUST00000206340.2
CDS CAA 90 bp GGATCTGTACTTCGGCGTGTAGCCTTGCAATGTACCCGCACATGGTaGCGCAGAGCCATAAGGTTGGGGTATTTTCGAGGACAAAGTGAA +
Preference number: 6 (lower is better)
Translates to: GSVLRRVALQCTRTW*RRAIRLGYFRGQSE
Trigger: TTCACTTTGTCCTCGAAAATACCCCAACCTTATGGCTCTGCGCAACCATGTGCGGGTACATTGCAAGGCTACACGCCGAAGTACAGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp CACTGGATCATGTTGTTCTTTCTTGACAGGGCTGGGTaGACCTTCAGTCCCTGGATCTGTACTTCGGCGTGT +
Preference number: 6 (lower is better)
Translates to: HWIMLFFLDRAG*TFSPWICTSAC
Trigger: ACACGCCGAAGTACAGATCCAGGGACTGAAGGTTCACCCAGCCCTGTCAAGAAAGAACAACATGATCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp CTGCTTCCATTCCCACTGGATCATGTTGTTCTTTCTTaGCAGGGCTGGGTGAACCTTCAGTCCCTGGATCTG +
Preference number: 6 (lower is better)
Translates to: LLPFPLDHVVLS*QGWVNLQSLDL
Trigger: CAGATCCAGGGACTGAAGGTTCACCCAGCCCTGTCAAGAAAGAACAACATGATCCAGTGGGAATGGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp AATGCTACACACCTGTGGCACTGTCCTATCTGCCATTaGGGGGTTACTGGTGGCCTCTTCTTCACGTTTGCA +
Preference number: 6 (lower is better)
Translates to: NATHLWHCPICH*GVTGGLFFTFA
Trigger: TGCAAACGTGAAGAAGAGGCCACCAGTAACCCCTCAATGGCAGATAGGACAGTGCCACAGGTGTGTAGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp TCTTCTGAGACGGAGGTCACTGTGCCCTCAAAGCCATaGTCTGCAACCATTTCTGTTGCATCACCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: SSETEVTVPSKP*SATISVASPAP
Trigger: AGGAGCAGGTGATGCAACAGAAATGGTTGCAGATCATGGCTTTGAGGGCACAGTGACCTCCGTCTCAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp TACTCCCTCTTCAGACTTTATGTCCCCACCTTCTTCTaGGACGGAGGTCACTGTGCCCTCAAAGCCATGATC +
Preference number: 6 (lower is better)
Translates to: YSLFRLYVPTFF*DGGHCALKAMI
Trigger: GATCATGGCTTTGAGGGCACAGTGACCTCCGTCTCAGAAGAAGGTGGGGACATAAAGTCTGAAGAGGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp CAGGCACCATTGTGGTTCATTTGTCCTCTGTCTCCTTaGCTCCCATCTACTTTCCCCACCTGCTGTGTGGAT +
Preference number: 6 (lower is better)
Translates to: QAPLWFICPLSP*LPSTFPTCCVD
Trigger: ATCCACACAGCAGGTGGGGAAAGTAGATGGGAGTCAAGGAGACAGAGGACAAATGAACCACAATGGTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 72 bp GGCACCCAGTCCGCCGTACCTCCTTTAGAATCTGGCTaGATTTCTAAGCCTTGTCTTTGTTTGGTAGGTGGA +
Preference number: 6 (lower is better)
Translates to: GTQSAVPPLESG*ISKPCLCLVGG
Trigger: TCCACCTACCAAACAAAGACAAGGCTTAGAAATGCAGCCAGATTCTAAAGGAGGTACGGCGGACTGGGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS GCA 72 bp CCATTGAGGGGTTACTGGTGGCCTCTTCTTCACGTTTaGATGCATGTTCCTCATCTCCGTGGAATGCTGCTT +
Preference number: 6 (lower is better)
Translates to: PLRGYWWPLLHV*MHVPHLRGMLL
Trigger: AAGCAGCATTCCACGGAGATGAGGAACATGCATGCAAACGTGAAGAAGAGGCCACCAGTAACCCCTCAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 72 bp CGTAAATGGCTTTTCATCGCAGCCATGGTATGGAAATaGTTGGCACAGGCCCCACAACTGAAGTCTCCTGTC +
Preference number: 6 (lower is better)
Translates to: RKWLFIAAMVWK*LAQAPQLKSPV
Trigger: GACAGGAGACTTCAGTTGTGGGGCCTGTGCCAAGCATTTCCATACCATGGCTGCGATGAAAAGCCATTTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp CACACTCATTACACTTATAGGGACGATGGTCCAGGCTaGCAGTGGGGACCTCGTCCACTTTTGGAGTATTCT +
Preference number: 6 (lower is better)
Translates to: HTHYTYRDDGPG*QWGPRPLLEYS
Trigger: AGAATACTCCAAAAGTGGACGAGGTCCCCACTGCCAGCCTGGACCATCGTCCCTATAAGTGTAATGAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
ENSMUST00000206340.2
CDS CCA 72 bp GTGGCACTGTCCTATCTGCCATTGAGGGGTTACTGGTaGCCTCTTCTTCACGTTTGCATGCATGTTCCTCAT +
Preference number: 6 (lower is better)
Translates to: VALSYLPLRGYW*PLLHVCMHVPH
Trigger: ATGAGGAACATGCATGCAAACGTGAAGAAGAGGCCACCAGTAACCCCTCAATGGCAGATAGGACAGTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp GCTGCTTCCATTCCCACTGGATCATGTTGTTCTTTCTaGACAGGGCTGGGTGAACCTTCAGTCCCTGGATCT +
Preference number: 6 (lower is better)
Translates to: AASIPTGSCCSF*TGLGEPSVPGS
Trigger: AGATCCAGGGACTGAAGGTTCACCCAGCCCTGTCAAGAAAGAACAACATGATCCAGTGGGAATGGAAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp AAATGCTACACACCTGTGGCACTGTCCTATCTGCCATaGAGGGGTTACTGGTGGCCTCTTCTTCACGTTTGC +
Preference number: 6 (lower is better)
Translates to: KCYTPVALSYLP*RGYWWPLLHVC
Trigger: GCAAACGTGAAGAAGAGGCCACCAGTAACCCCTCAATGGCAGATAGGACAGTGCCACAGGTGTGTAGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp ATGGCTAGGAACATTCTCTGTCCTATTGCTAGAACTTaGACTTTGGTGGTGACGCTCCAGGCTCCCCAGGTC +
Preference number: 6 (lower is better)
Translates to: MARNILCPIART*TLVVTLQAPQV
Trigger: GACCTGGGGAGCCTGGAGCGTCACCACCAAAGTCAAAGTTCTAGCAATAGGACAGAGAATGTTCCTAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 90 bp CAAATGGCTAGGAACATTCTCTGTCCTATTGCTAGAACTTTGACTTaGGTGGTGACGCTCCAGGCTCCCCAGGTCATCATAGGTCTGACC +
Preference number: 6 (lower is better)
Translates to: QMARNILCPIARTLT*VVTLQAPQVIIGLT
Trigger: GGTCAGACCTATGATGACCTGGGGAGCCTGGAGCGTCACCACCAAAGTCAAAGTTCTAGCAATAGGACAGAGAATGTTCCTAGCCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 72 bp TGTTTGGTGGCTTTTTCGATGGTTGATGAGACTACCTaGATGACGGTAGGTACGGCCACAGTCTCCACAACA +
Preference number: 6 (lower is better)
Translates to: CLVAFSMVDETT*MTVGTATVSTT
Trigger: TGTTGTGGAGACTGTGGCCGTACCTACCGTCATGCAGGTAGTCTCATCAACCATCGAAAAAGCCACCAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
ENSMUST00000206340.2
CDS GCA 72 bp TTATGTCCCCACCTTCTTCTGAGACGGAGGTCACTGTaGCCTCAAAGCCATGATCTGCAACCATTTCTGTTG +
Preference number: 6 (lower is better)
Translates to: LCPHLLLRRRSL*PQSHDLQPFLL
Trigger: CAACAGAAATGGTTGCAGATCATGGCTTTGAGGGCACAGTGACCTCCGTCTCAGAAGAAGGTGGGGACATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 72 bp GGTGACAAGGATTCCTGGAGACAGTGTCTTCCAACTTaGCTTCTGGCTTGGTTAACTGATCCTGAAGAACCC +
Preference number: 6 (lower is better)
Translates to: GDKDSWRQCLPT*LLAWLTDPEEP
Trigger: GGGTTCTTCAGGATCAGTTAACCAAGCCAGAAGGCAAGTTGGAAGACACTGTCTCCAGGAATCCTTGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp TCTGACTGTGCTCAACAGCATGAGTCTTCATGTGTGTaGCCAGTTCACTGTGGGACTCACACACTTTGCTAC +
Preference number: 6 (lower is better)
Translates to: SDCAQQHESSCV*PVHCGTHTLCY
Trigger: GTAGCAAAGTGTGTGAGTCCCACAGTGAACTGGCCACACACATGAAGACTCATGCTGTTGAGCACAGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp TTAGAATCTGGCTGCATTTCTAAGCCTTGTCTTTGTTaGGTAGGTGGATCTTCCCACGTCCCTGACGCTGCC +
Preference number: 6 (lower is better)
Translates to: LESGCISKPCLC*VGGSSHVPDAA
Trigger: GGCAGCGTCAGGGACGTGGGAAGATCCACCTACCAAACAAAGACAAGGCTTAGAAATGCAGCCAGATTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS CAA 72 bp GATTCAGCCAAATACTGTTCCAAATTGCTAAGAAGGTaGCTCGCTGGAGTGGGGAGTGGTGATGCTCCTTCG +
Preference number: 6 (lower is better)
Translates to: DSAKYCSKLLRR*LAGVGSGDAPS
Trigger: CGAAGGAGCATCACCACTCCCCACTCCAGCGAGCAACCTTCTTAGCAATTTGGAACAGTATTTGGCTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS CAA 72 bp CAATGTACCCGCACATGGTTGCGCAGAGCCATAAGGTaGGGGTATTTTCGAGGACAAAGTGAACACTGGTAC +
Preference number: 6 (lower is better)
Translates to: QCTRTWLRRAIR*GYFRGQSEHWY
Trigger: GTACCAGTGTTCACTTTGTCCTCGAAAATACCCCAACCTTATGGCTCTGCGCAACCATGTGCGGGTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
ENSMUST00000206340.2
CDS CAA 72 bp CTGATCCTGAAGAACCCAGGCACCATTGTGGTTCATTaGTCCTCTGTCTCCTTGACTCCCATCTACTTTCCC +
Preference number: 6 (lower is better)
Translates to: LILKNPGTIVVH*SSVSLTPIYFP
Trigger: GGGAAAGTAGATGGGAGTCAAGGAGACAGAGGACAAATGAACCACAATGGTGCCTGGGTTCTTCAGGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 90 bp TTCACTACTGATTCAGCCAAATACTGTTCCAAATTGCTAAGAAGGTaGCTCGCTGGAGTGGGGAGTGGTGATGCTCCTTCGGAACTGACG +
Preference number: 6 (lower is better)
Translates to: FTTDSAKYCSKLLRR*LAGVGSGDAPSELT
Trigger: CGTCAGTTCCGAAGGAGCATCACCACTCCCCACTCCAGCGAGCAACCTTCTTAGCAATTTGGAACAGTATTTGGCTGAATCAGTAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS CAA 90 bp GCCTCTGTGAAGTTCACTACTGATTCAGCCAAATACTGTTCCAAATaGCTAAGAAGGTTGCTCGCTGGAGTGGGGAGTGGTGATGCTCCT +
Preference number: 6 (lower is better)
Translates to: ASVKFTTDSAKYCSK*LRRLLAGVGSGDAP
Trigger: AGGAGCATCACCACTCCCCACTCCAGCGAGCAACCTTCTTAGCAATTTGGAACAGTATTTGGCTGAATCAGTAGTGAACTTCACAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS CAA 90 bp ACATTCCACAAATGCTACACACCTGTGGCACTGTCCTATCTGCCATaGAGGGGTTACTGGTGGCCTCTTCTTCACGTTTGCATGCATGTT +
Preference number: 6 (lower is better)
Translates to: TFHKCYTPVALSYLP*RGYWWPLLHVCMHV
Trigger: AACATGCATGCAAACGTGAAGAAGAGGCCACCAGTAACCCCTCAATGGCAGATAGGACAGTGCCACAGGTGTGTAGCATTTGTGGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 90 bp TCCTTCCAAATGGCTAGGAACATTCTCTGTCCTATTGCTAGAACTTaGACTTTGGTGGTGACGCTCCAGGCTCCCCAGGTCATCATAGGT +
Preference number: 6 (lower is better)
Translates to: SFQMARNILCPIART*TLVVTLQAPQVIIG
Trigger: ACCTATGATGACCTGGGGAGCCTGGAGCGTCACCACCAAAGTCAAAGTTCTAGCAATAGGACAGAGAATGTTCCTAGCCATTTGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp AGGAACATTCTCTGTCCTATTGCTAGAACTTTGACTTaGGTGGTGACGCTCCAGGCTCCCCAGGTCATCATA +
Preference number: 6 (lower is better)
Translates to: RNILCPIARTLT*VVTLQAPQVII
Trigger: TATGATGACCTGGGGAGCCTGGAGCGTCACCACCAAAGTCAAAGTTCTAGCAATAGGACAGAGAATGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp ATGTGTGTGGCCAGTTCACTGTGGGACTCACACACTTaGCTACAATTACTACAAGCAAAGCGCTGGGCAGTA +
Preference number: 6 (lower is better)
Translates to: MCVASSLWDSHT*LQLLQAKRWAV
Trigger: TACTGCCCAGCGCTTTGCTTGTAGTAATTGTAGCAAAGTGTGTGAGTCCCACAGTGAACTGGCCACACACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp GTCTTCAGTTTCACAAGGACTTTCTCCCAAAGGATCTaGGGAAGAATCTGGGTCCTCGTCGTTTTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: VFSFTRTFSQRI*GRIWVLVVFQL
Trigger: AAGCTGGAAAACGACGAGGACCCAGATTCTTCCCAAGATCCTTTGGGAGAAAGTCCTTGTGAAACTGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp CAATTACTACAAGCAAAGCGCTGGGCAGTAGTGTGGTaGTGGATCTCAGTGGTCACAGGATTCAAGAACTCT +
Preference number: 6 (lower is better)
Translates to: QLLQAKRWAVVW*WISVVTGFKNS
Trigger: AGAGTTCTTGAATCCTGTGACCACTGAGATCCACAACCACACTACTGCCCAGCGCTTTGCTTGTAGTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 90 bp ACTTTGCTACAATTACTACAAGCAAAGCGCTGGGCAGTAGTGTGGTaGTGGATCTCAGTGGTCACAGGATTCAAGAACTCTTTGGAACAG +
Preference number: 6 (lower is better)
Translates to: TLLQLLQAKRWAVVW*WISVVTGFKNSLEQ
Trigger: CTGTTCCAAAGAGTTCTTGAATCCTGTGACCACTGAGATCCACAACCACACTACTGCCCAGCGCTTTGCTTGTAGTAATTGTAGCAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 72 bp ACGTTTGCATGCATGTTCCTCATCTCCGTGGAATGCTaGTTCCATTCCCACTGGATCATGTTGTTCTTTCTT +
Preference number: 6 (lower is better)
Translates to: TFACMFLISVEC*FHSHWIMLFFL
Trigger: AAGAAAGAACAACATGATCCAGTGGGAATGGAAGCAGCATTCCACGGAGATGAGGAACATGCATGCAAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS GCA 72 bp AAAGCCATGATCTGCAACCATTTCTGTTGCATCACCTaGTCCTTCCAAATGGCTAGGAACATTCTCTGTCCT +
Preference number: 6 (lower is better)
Translates to: KAMICNHFCCIT*SFQMARNILCP
Trigger: AGGACAGAGAATGTTCCTAGCCATTTGGAAGGAGCAGGTGATGCAACAGAAATGGTTGCAGATCATGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CAA 72 bp AAGTTCACTACTGATTCAGCCAAATACTGTTCCAAATaGCTAAGAAGGTTGCTCGCTGGAGTGGGGAGTGGT +
Preference number: 6 (lower is better)
Translates to: KFTTDSAKYCSK*LRRLLAGVGSG
Trigger: ACCACTCCCCACTCCAGCGAGCAACCTTCTTAGCAATTTGGAACAGTATTTGGCTGAATCAGTAGTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000131000.2
CDS CCA 72 bp GCAACCATTTCTGTTGCATCACCTGCTCCTTCCAAATaGCTAGGAACATTCTCTGTCCTATTGCTAGAACTT +
Preference number: 6 (lower is better)
Translates to: ATISVASPAPSK*LGTFSVLLLEL
Trigger: AAGTTCTAGCAATAGGACAGAGAATGTTCCTAGCCATTTGGAAGGAGCAGGTGATGCAACAGAAATGGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS CCA 72 bp TGTGGATCTCAGTGGTCACAGGATTCAAGAACTCTTTaGAACAGAGCAGACAAATGTGACAGTCTTTCCCAT +
Preference number: 6 (lower is better)
Translates to: CGSQWSQDSRTL*NRADKCDSLSH
Trigger: ATGGGAAAGACTGTCACATTTGTCTGCTCTGTTCCAAAGAGTTCTTGAATCCTGTGACCACTGAGATCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2
CDS TCA 72 bp CTTCCCTGTGGGTCACGCTATGATGTTCGAGACTTTTaGGATCTTCAAACAACATTCCACAAATGCTACACA +
Preference number: 6 (lower is better)
Translates to: LPCGSRYDVRDF*DLQTTFHKCYT
Trigger: TGTGTAGCATTTGTGGAATGTTGTTTGAAGATCTCAAAAGTCTCGAACATCATAGCGTGACCCACAGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050383.8
ENSMUST00000206340.2