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Pregenerated sensors for ZFP641 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022987

Ensembl transcript IDs: ENSMUST00000023722.12, ENSMUST00000169721.3

Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAATACTCTGGCCCTCAGGGTACAGGAGAGGGCCAGCTCTGGCAGTaGCTGCTGGTAGCACCGGCTGACAGATATGACCATGGCTACAGA +
Preference number: 1 (lower is better)
Translates to: KYSGPQGTGEGQLWQ*LLVAPADRYDHGYR
Trigger: TCTGTAGCCATGGTCATATCTGTCAGCCGGTGCTACCAGCAGCCACTGCCAGAGCTGGCCCTCTCCTGTACCCTGAGGGCCAGAGTATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR TCA 90 bp TCCCTAAGAACAGGGCACAGTCAGTCTAAGCCGTGCCTTAGCCATTaGAGGCCTGGCTCTGTCCTCATCTCCTGGTGCCTTCTAGTATTT +
Preference number: 1 (lower is better)
Translates to: SLRTGHSQSKPCLSH*RPGSVLISWCLLVF
Trigger: AAATACTAGAAGGCACCAGGAGATGAGGACAGAGCCAGGCCTTCAATGGCTAAGGCACGGCTTAGACTGACTGTGCCCTGTTCTTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR GCA 90 bp ATTACATTGCCTTGGCTCATCCAGAACGCAGAAACCATCTCTCTCTaGCTCCCTGAAGCTGGGATTAAGGATGTGAGAGAGACACCACCA +
Preference number: 1 (lower is better)
Translates to: ITLPWLIQNAETISL*LPEAGIKDVRETPP
Trigger: TGGTGGTGTCTCTCTCACATCCTTAATCCCAGCTTCAGGGAGGCAGAGAGAGATGGTTTCTGCGTTCTGGATGAGCCAAGGCAATGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR GCA 90 bp AACAAAACAAGACAGAACCCCACGCAGCACGAACCACCATCACATTaGTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTCT +
Preference number: 1 (lower is better)
Translates to: NKTRQNPTQHEPPSH*SRSTTTTSHCPFPS
Trigger: AGACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTGGTTCGTGCTGCGTGGGGTTCTGTCTTGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR GCA 90 bp AAGAGAATGCATCCTAGCTCAAGAAGGGAGGCTGTTCTGAGCAGCTaGAGAAAGAGGTTGGAGGCTGGGCTGCTCAATTTAACCAAAATG +
Preference number: 1 (lower is better)
Translates to: KRMHPSSRREAVLSS*RKRLEAGLLNLTKM
Trigger: CATTTTGGTTAAATTGAGCAGCCCAGCCTCCAACCTCTTTCTGCAGCTGCTCAGAACAGCCTCCCTTCTTGAGCTAGGATGCATTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CCA 90 bp CTCTGTGCTGCCTTTCAGTTGGATGCTGTAACCGCACCTACCCTTTaGGGGCTCCACTTTCTATCCCCTCAATTACTAAAGCAGATAAAA +
Preference number: 1 (lower is better)
Translates to: LCAAFQLDAVTAPTL*GLHFLSPQLLKQIK
Trigger: TTTTATCTGCTTTAGTAATTGAGGGGATAGAAAGTGGAGCCCCCAAAGGGTAGGTGCGGTTACAGCATCCAACTGAAAGGCAGCACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR TCA 90 bp TGCCAAGGGCAGGCTCTGAGTCCACTTGTCCAATGCATATGCAAATaGGTGAGTTGTAAATGTCTACTTTTCTGCCTGGTTTCTACCGGA +
Preference number: 1 (lower is better)
Translates to: CQGQALSPLVQCICK*VSCKCLLFCLVSTG
Trigger: TCCGGTAGAAACCAGGCAGAAAAGTAGACATTTACAACTCACTCATTTGCATATGCATTGGACAAGTGGACTCAGAGCCTGCCCTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR GCA 90 bp AACAGTGTTCGAGAAATAAATATCTCAAGGAGAAGCAGCAGCCCGTaGGTGAGCCTTGAAGACACCCCCTCTTACATTCTTTGCTTCTGT +
Preference number: 1 (lower is better)
Translates to: NSVREINISRRSSSP*VSLEDTPSYILCFC
Trigger: ACAGAAGCAAAGAATGTAAGAGGGGGTGTCTTCAAGGCTCACGCACGGGCTGCTGCTTCTCCTTGAGATATTTATTTCTCGAACACTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CCA 90 bp ATACTAACAGCCGCTTTCACTTTCTCTCTGTGTAGAGTAAATACTTaGGAACTGGTACCACATGGACCCCAACCAGTGAGAATGGACCTC +
Preference number: 1 (lower is better)
Translates to: ILTAAFTFSLCRVNT*ELVPHGPQPVRMDL
Trigger: GAGGTCCATTCTCACTGGTTGGGGTCCATGTGGTACCAGTTCCCAAGTATTTACTCTACACAGAGAGAAAGTGAAAGCGGCTGTTAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR TCA 90 bp GGACCTCAGCTATCACTGCTGGTTCCCTTGAGAGTAGGTTCAGCATaGATAGCCTCACACATACATACTTTGCACCATTTCCCACAATTT +
Preference number: 1 (lower is better)
Translates to: GPQLSLLVPLRVGSA*IASHIHTLHHFPQF
Trigger: AAATTGTGGGAAATGGTGCAAAGTATGTATGTGTGAGGCTATTCATGCTGAACCTACTCTCAAGGGAACCAGCAGTGATAGCTGAGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CCA 90 bp GCAGACCCACATGAGAGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATGGAGAGGGCCAGCTCTaGCAGTGGCTGCTGGTAGCA +
Preference number: 2 (lower is better)
Translates to: ADPHESVWPLALKLRMPDGEGQL*QWLLVA
Trigger: TGCTACCAGCAGCCACTGCCAGAGCTGGCCCTCTCC...ATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACTCTCATGTGGGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CCA 90 bp CACCATCACATTGCTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTGGCCAGCTCTGGCAGTaGCTGCTGGTAGCACCGGCT +
Preference number: 2 (lower is better)
Translates to: HHHIARGQQQQQVTVPFRGQLWQ*LLVAPA
Trigger: AGCCGGTGCTACCAGCAGCCACTGCCAGAGCTGGCC...ACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp CTTTCAGTTGGATGCTGTAACCGCACCTACCCTTTGGGGGCTCCACTTTCTATCCCCGTGCGTGAGCCTTaGAGACACCCCCTCTTACAT +
Preference number: 2 (lower is better)
Translates to: LSVGCCNRTYPLGAPLSIPVREP*RHPLLH
Trigger: ATGTAAGAGGGGGTGTCTTCAAGGCTCACGCACGGG...GATAGAAAGTGGAGCCCCCAAAGGGTAGGTGCGGTTACAGCATCCAACTGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp CTCCCTGAAGCTGGGATTAAGGATGTGAGAGAGACACCACCACCAACTGTTCCTGAAGGGAGGCTGTTCTaGGCAGCTGCAGAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: LPEAGIKDVRETPPPTVPEGRLF*AAAERG
Trigger: ACCTCTTTCTGCAGCTGCTCAGAACAGCCTCCCTTC...AGGAACAGTTGGTGGTGGTGTCTCTCTCACATCCTTAATCCCAGCTTCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR GCA 90 bp GATGTGAGAGAGACACCACCACCAACTGTTCCTCTCCTTTGGAGATGCCAAGGGGCTGTTCTGAGCAGCTaGAGAAAGAGGTTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: DVRETPPPTVPLLWRCQGAVLSS*RKRLEA
Trigger: AGCCTCCAACCTCTTTCTGCAGCTGCTCAGAACAGC...CCCTTGGCATCTCCAAAGGAGAGGAACAGTTGGTGGTGGTGTCTCTCTCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CCA 90 bp TCCCTTGAGAGTAGGTTCAGCATGAATAGCCTCACACATACATACTTTGCACCAGGCCAGCTCTGGCAGTaGCTGCTGGTAGCACCGGCT +
Preference number: 2 (lower is better)
Translates to: SLESRFSMNSLTHTYFAPGQLWQ*LLVAPA
Trigger: AGCCGGTGCTACCAGCAGCCACTGCCAGAGCTGGCC...TGGTGCAAAGTATGTATGTGTGAGGCTATTCATGCTGAACCTACTCTCAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CAA 90 bp CCTAGCTCAAGAAGGGAGGCTGTTCTGAGCAGCTGCAGAAAGAGGTaGGAGGCTGGGCTGCTCAATTTAACCAAAATGCCTAGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: PSSRREAVLSSCRKR*EAGLLNLTKMPSQQ
Trigger: CTGCTGACTAGGCATTTTGGTTAAATTGAGCAGCCCAGCCTCCAACCTCTTTCTGCAGCTGCTCAGAACAGCCTCCCTTCTTGAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp GAAAGCCAAACTAGGATGACAAGAGTAACTCCCAGGGCTGTGACCCCTGTCCTGGTCTCACAGAAATGGTaGGAAATACTCTGGCCCTCA +
Preference number: 2 (lower is better)
Translates to: ESQTRMTRVTPRAVTPVLVSQKW*EILWPS
Trigger: TGAGGGCCAGAGTATTTCTCACCATTTCTGTGAGAC...CAGGACAGGGGTCACAGCCCTGGGAGTTACTCTTGTCATCCTAGTTTGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp GATGTGAGAGAGACACCACCACCAACTGTTCCTCTCCTTTGGAGATGCCAAGGGGTGGTATGTGCATGTTaGACGTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: DVRETPPPTVPLLWRCQGVVCAC*TCVCVC
Trigger: ACACACACACACACACGTTCAACATGCACATACCAC...CCCTTGGCATCTCCAAAGGAGAGGAACAGTTGGTGGTGGTGTCTCTCTCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp TCAAGGAGAAGCAGCAGCCCGTGCGTGAGCCTTGAAGACACCCCCTCTTACATTTTTAGCTCTGTAACCTaGTCTCTCAGCTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: SRRSSSPCVSLEDTPSYIFSSVT*SLSCVC
Trigger: ACACACACAGCTGAGAGATCAGGTTACAGAGCTAAA...AATGTAAGAGGGGGTGTCTTCAAGGCTCACGCACGGGCTGCTGCTTCTCCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp TCAAGGAGAAGCAGCAGCCCGTGCGTGAGCCTTGAAGACACCCCCTCTTACATTGCTTCTGTTCCTCCCTaGCTCCAAACTTCTCTTAAA +
Preference number: 2 (lower is better)
Translates to: SRRSSSPCVSLEDTPSYIASVPP*LQTSLK
Trigger: TTTAAGAGAAGTTTGGAGTCAGGGAGGAACAGAAGC...AATGTAAGAGGGGGTGTCTTCAAGGCTCACGCACGGGCTGCTGCTTCTCCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp GCAGACCCACATGAGAGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATCCATTCTGTAGAATTTaGTGTAGATCTTGGAGCCAA +
Preference number: 2 (lower is better)
Translates to: ADPHESVWPLALKLRMPDPFCRI*CRSWSQ
Trigger: TTGGCTCCAAGATCTACATCAAATTCTACAGAATGG...ATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACTCTCATGTGGGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CCA 90 bp TTCAGACCTAGATATACAAATCCACAACTGTCTACATCCCAGGAATACCAAGGAGGAGAGGGCCAGCTCTaGCAGTGGCTGCTGGTAGCA +
Preference number: 2 (lower is better)
Translates to: FRPRYTNPQLSTSQEYQGGEGQL*QWLLVA
Trigger: TGCTACCAGCAGCCACTGCCAGAGCTGGCCCTCTCC...TCCTTGGTATTCCTGGGATGTAGACAGTTGTGGATTTGTATATCTAGGTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CCA 90 bp GAAAGCCAAACTAGGATGACAAGAGTAACTCCCAGGGCTGTGACCCCTGTCCTGGCATATGCATCCATGTaGTTGTGTGTGGTATGTGCA +
Preference number: 2 (lower is better)
Translates to: ESQTRMTRVTPRAVTPVLAYASM*LCVVCA
Trigger: TGCACATACCACACACAACCACATGGATGCATATGC...CAGGACAGGGGTCACAGCCCTGGGAGTTACTCTTGTCATCCTAGTTTGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp CACCATCACATTGCTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTCAGGATGAGGGACTATaGACTGGGAGTGAAAGCTCA +
Preference number: 2 (lower is better)
Translates to: HHHIARGQQQQQVTVPFRQDEGL*TGSESS
Trigger: TGAGCTTTCACTCCCAGTTCATAGTCCCTCATCCTG...ACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp CTCCCTGAAGCTGGGATTAAGGATGTGAGAGAGACACCACCACCAACTGTTCCTGCTTCTGTTCCTCCCTaGCTCCAAACTTCTCTTAAA +
Preference number: 2 (lower is better)
Translates to: LPEAGIKDVRETPPPTVPASVPP*LQTSLK
Trigger: TTTAAGAGAAGTTTGGAGTCAGGGAGGAACAGAAGC...AGGAACAGTTGGTGGTGGTGTCTCTCTCACATCCTTAATCCCAGCTTCAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR GCA 90 bp TTTTCAGACAGGATCTCATTACATTGCCTTGGCTCATCCAGAACGCAGAAACCACCTCTCCTTTGGAGATaGCAAGGGCAGGCTCTGAGT +
Preference number: 2 (lower is better)
Translates to: FSDRISLHCLGSSRTQKPPLLWR*QGQALS
Trigger: ACTCAGAGCCTGCCCTTGGCATCTCCAAAGGAGAGG...TGGTTTCTGCGTTCTGGATGAGCCAAGGCAATGTAATGAGATCCTGTCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CAA 90 bp ACTCTGTGCTGCCTTTCAGTTGGATGCTGTAACCGCACCTACCCTTaGGGGGCTCCACTTTCTATCCCCTCAATTACTAAAGCAGATAAA +
Preference number: 2 (lower is better)
Translates to: TLCCLSVGCCNRTYP*GAPLSIPSITKADK
Trigger: TTTATCTGCTTTAGTAATTGAGGGGATAGAAAGTGGAGCCCCCAAAGGGTAGGTGCGGTTACAGCATCCAACTGAAAGGCAGCACAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp TTTTCAGACAGGATCTCATTACATTGCCTTGGCTCATCCAGAACGCAGAAACCAGGAGTGAGAGGCATGTaGTCACAGGGGAAGAGAGAA +
Preference number: 2 (lower is better)
Translates to: FSDRISLHCLGSSRTQKPGVRGM*SQGKRE
Trigger: TTCTCTCTTCCCCTGTGATCACATGCCTCTCACTCC...TGGTTTCTGCGTTCTGGATGAGCCAAGGCAATGTAATGAGATCCTGTCTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp AGAGGCTCAGCAACCATTCTTCCCTTTGATGAAAGCCAAACTAGGATGACAAGATTTCAGAGGGAGGAGTaGGAGGCATGTGATCACAGG +
Preference number: 2 (lower is better)
Translates to: RGSATILPFDESQTRMTRFQREE*EACDHR
Trigger: CCTGTGATCACATGCCTCTCACTCCTCCCTCTGAAA...TCTTGTCATCCTAGTTTGGCTTTCATCAAAGGGAAGAATGGTTGCTGAGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp GGCTCAGCAACCATTCTTCCCTTTGATGAAAGCCAAACTAGGATGACAAGAGTATTTCAGAGGGAGGAGTaGGAGGCATGTGATCACAGG +
Preference number: 2 (lower is better)
Translates to: GSATILPFDESQTRMTRVFQREE*EACDHR
Trigger: CCTGTGATCACATGCCTCTCACTCCTCCCTCTGAAA...TACTCTTGTCATCCTAGTTTGGCTTTCATCAAAGGGAAGAATGGTTGCTGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp AGTCAGCAGAATAACTCTGTTTCCATTCCTCTCGAGCCAAGGGCCCAAGAGCTCTTGTACATTTCGCACTaGGCATGCTGTCTTCAAAGA +
Preference number: 2 (lower is better)
Translates to: SQQNNSVSIPLEPRAQELLYISH*ACCLQR
Trigger: TCTTTGAAGACAGCATGCTCAGTGCGAAATGTACAA...GAGCTCTTGGGCCCTTGGCTCGAGAGGAATGGAAACAGAGTTATTCTGCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR GCA 90 bp AGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATCACCATCTCTTTCCTCATTTCCCACAATTTTaGCCAGAGAACTCTGTTTTC +
Preference number: 2 (lower is better)
Translates to: SVWPLALKLRMPDHHLFPHFPQF*PENSVF
Trigger: GAAAACAGAGTTCTCTGGGCAAAATTGTGGGAAATG...AGGAAAGAGATGGTGATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp CGTTGCTCGTTTTATTATTTGTCCAAAGGCGTTGTATTGGACCGAGGTAGACAAGGAGTGAGAGGCATGTaGTCACAGGGGAAGAGAGAA +
Preference number: 2 (lower is better)
Translates to: RCSFYYLSKGVVLDRGRQGVRGM*SQGKRE
Trigger: TTCTCTCTTCCCCTGTGATCACATGCCTCTCACTCC...TTGTCTACCTCGGTCCAATACAACGCCTTTGGACAAATAATAAAACGAGCAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp AGAGGCTCAGCAACCATTCTTCCCTTTGATGAAAGCCAAACTAGGATGACAAGACAGGATGAGGGACTATaGACTGGGAGTGAAAGCTCA +
Preference number: 2 (lower is better)
Translates to: RGSATILPFDESQTRMTRQDEGL*TGSESS
Trigger: TGAGCTTTCACTCCCAGTTCATAGTCCCTCATCCTG...TCTTGTCATCCTAGTTTGGCTTTCATCAAAGGGAAGAATGGTTGCTGAGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp CTTTCAGTTGGATGCTGTAACCGCACCTACCCTTTGGGGGCTCCACTTTCTATCTTGCCTTGTAGTTCTTaGTACAAGTGTCATCTACAC +
Preference number: 2 (lower is better)
Translates to: LSVGCCNRTYPLGAPLSILPCSS*YKCHLH
Trigger: GTGTAGATGACACTTGTATCAAGAACTACAAGGCAA...GATAGAAAGTGGAGCCCCCAAAGGGTAGGTGCGGTTACAGCATCCAACTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CCA 90 bp TGCCTTGTAGTTCTTGATACAAGTGTCATCTACACAACAACCAGTCAGGAAGGAGCTGCAGAAAGAGGTTaGAGGCTGGGCTGCTCAATT +
Preference number: 2 (lower is better)
Translates to: CLVVLDTSVIYTTTSQEGAAERG*RLGCSI
Trigger: AATTGAGCAGCCCAGCCTCCAACCTCTTTCTGCAGC...TCCTTCCTGACTGGTTGTTGTGTAGATGACACTTGTATCAAGAACTACAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CAA 90 bp ACATCCCAGGAATACCAAGGAAAACTTTGTACACAACTCAAGCCATaGTTACACCATCCCACTACGACTCCCTGTACCACTCAGAATACG +
Preference number: 2 (lower is better)
Translates to: TSQEYQGKLCTQLKP*LHHPTTTPCTTQNT
Trigger: CGTATTCTGAGTGGTACAGGGAGTCGTAGTGGGATGGTGTAACAATGGCTTGAGTTGTGTACAAAGTTTTCCTTGGTATTCCTGGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp TTTTCAGACAGGATCTCATTACATTGCCTTGGCTCATCCAGAACGCAGAAACCAGTCTCACAGAAATGGTaGGAAATACTCTGGCCCTCA +
Preference number: 2 (lower is better)
Translates to: FSDRISLHCLGSSRTQKPVSQKW*EILWPS
Trigger: TGAGGGCCAGAGTATTTCTCACCATTTCTGTGAGAC...TGGTTTCTGCGTTCTGGATGAGCCAAGGCAATGTAATGAGATCCTGTCTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp CAGGGATTCAGACCTAGATATACAAATCCACAACTGTCTACATCCCAGGAATACTGTGTGTGTACAGGATaGGGGACTATGAACTGGGAG +
Preference number: 2 (lower is better)
Translates to: QGFRPRYTNPQLSTSQEYCVCTG*GTMNWE
Trigger: CTCCCAGTTCATAGTCCCTCATCCTGTACACACACA...GTATTCCTGGGATGTAGACAGTTGTGGATTTGTATATCTAGGTCTGAATCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp AACTTTGTACACAACTCAAGCCATTGTTACACCATCCCACTACGACTCCCTGTAGTGGTATGTGCATGTTaGACGTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: NFVHNSSHCYTIPLRLPVVVCAC*TCVCVC
Trigger: ACACACACACACACACGTTCAACATGCACATACCAC...TACAGGGAGTCGTAGTGGGATGGTGTAACAATGGCTTGAGTTGTGTACAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CCA 90 bp CACCATCACATTGCTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTGTTTTTCCTTCTGTGTaGGCCTTGATTACTTGGGTA +
Preference number: 2 (lower is better)
Translates to: HHHIARGQQQQQVTVPFRVFPSV*ALITWV
Trigger: TACCCAAGTAATCAAGGCCCACACAGAAGGAAAAAC...ACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp CACCATCACATTGCTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTCCATTCTGTAGAATTTaGTGTAGATCTTGGAGCCAA +
Preference number: 2 (lower is better)
Translates to: HHHIARGQQQQQVTVPFRPFCRI*CRSWSQ
Trigger: TTGGCTCCAAGATCTACATCAAATTCTACAGAATGG...ACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp CACCATCACATTGCTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTACTATGAACTGGGAGTaGAAGCTCACTCTATACTTT +
Preference number: 2 (lower is better)
Translates to: HHHIARGQQQQQVTVPFRTMNWE*KLTLYF
Trigger: AAAGTATAGAGTGAGCTTTCACTCCCAGTTCATAGT...ACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR GCA 90 bp CACCATCACATTGCTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTCATTTCCCACAATTTTaGCCAGAGAACTCTGTTTTC +
Preference number: 2 (lower is better)
Translates to: HHHIARGQQQQQVTVPFRHFPQF*PENSVF
Trigger: GAAAACAGAGTTCTCTGGGCAAAATTGTGGGAAATG...ACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CCA 90 bp TTTTCAGACAGGATCTCATTACATTGCCTTGGCTCATCCAGAACGCAGAAACCACCATGTGGTTGTGTGTaGTATGTGCATGTTGAACGT +
Preference number: 2 (lower is better)
Translates to: FSDRISLHCLGSSRTQKPPCGCV*YVHVER
Trigger: ACGTTCAACATGCACATACCACACACAACCACATGG...TGGTTTCTGCGTTCTGGATGAGCCAAGGCAATGTAATGAGATCCTGTCTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CCA 90 bp GGCTCAGCAACCATTCTTCCCTTTGATGAAAGCCAAACTAGGATGACAAGAGTACCATGTGGTTGTGTGTaGTATGTGCATGTTGAACGT +
Preference number: 2 (lower is better)
Translates to: GSATILPFDESQTRMTRVPCGCV*YVHVER
Trigger: ACGTTCAACATGCACATACCACACACAACCACATGG...TACTCTTGTCATCCTAGTTTGGCTTTCATCAAAGGGAAGAATGGTTGCTGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CAA 90 bp TACAAATCCACAACTGTCTACATCCCAGGAATACCAAGGAAAACTTaGTACACAACTCAAGCCATTGTTACACCATCCCACTACGACTCC +
Preference number: 2 (lower is better)
Translates to: YKSTTVYIPGIPRKT*YTTQAIVTPSHYDS
Trigger: GGAGTCGTAGTGGGATGGTGTAACAATGGCTTGAGTTGTGTACAAAGTTTTCCTTGGTATTCCTGGGATGTAGACAGTTGTGGATTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp AACTTTGTACACAACTCAAGCCATTGTTACACCATCCCACTACGACTCCCTGTATACATGAATAGAAATTaGCTGTGGGGGTTCTCAGAG +
Preference number: 2 (lower is better)
Translates to: NFVHNSSHCYTIPLRLPVYMNRN*LWGFSE
Trigger: CTCTGAGAACCCCCACAGTCAATTTCTATTCATGTA...TACAGGGAGTCGTAGTGGGATGGTGTAACAATGGCTTGAGTTGTGTACAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp TGCCTTGTAGTTCTTGATACAAGTGTCATCTACACAACAACCAGTCAGGAAGGATTTAGCTCTGTAACCTaGTCTCTCAGCTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: CLVVLDTSVIYTTTSQEGFSSVT*SLSCVC
Trigger: ACACACACAGCTGAGAGATCAGGTTACAGAGCTAAA...TCCTTCCTGACTGGTTGTTGTGTAGATGACACTTGTATCAAGAACTACAAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp AGAGGCTCAGCAACCATTCTTCCCTTTGATGAAAGCCAAACTAGGATGACAAGATTGTACATTTCGCACTaGGCATGCTGTCTTCAAAGA +
Preference number: 2 (lower is better)
Translates to: RGSATILPFDESQTRMTRLYISH*ACCLQR
Trigger: TCTTTGAAGACAGCATGCTCAGTGCGAAATGTACAA...TCTTGTCATCCTAGTTTGGCTTTCATCAAAGGGAAGAATGGTTGCTGAGCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CCA 90 bp AGAGGCTCAGCAACCATTCTTCCCTTTGATGAAAGCCAAACTAGGATGACAAGAGTTTTTCCTTCTGTGTaGGCCTTGATTACTTGGGTA +
Preference number: 2 (lower is better)
Translates to: RGSATILPFDESQTRMTRVFPSV*ALITWV
Trigger: TACCCAAGTAATCAAGGCCCACACAGAAGGAAAAAC...TCTTGTCATCCTAGTTTGGCTTTCATCAAAGGGAAGAATGGTTGCTGAGCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CCA 90 bp TGCCTTGTAGTTCTTGATACAAGTGTCATCTACACAACAACCAGTCAGGAAGGAAAAGAGGTTGGAGGCTaGGCTGCTCAATTTAACCAA +
Preference number: 2 (lower is better)
Translates to: CLVVLDTSVIYTTTSQEGKEVGG*AAQFNQ
Trigger: TTGGTTAAATTGAGCAGCCCAGCCTCCAACCTCTTT...TCCTTCCTGACTGGTTGTTGTGTAGATGACACTTGTATCAAGAACTACAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CCA 90 bp TGCCTTGTAGTTCTTGATACAAGTGTCATCTACACAACAACCAGTCAGGAAGGAGTCTACTTTTCTGCCTaGTTTCTACCGGATTCCGAA +
Preference number: 2 (lower is better)
Translates to: CLVVLDTSVIYTTTSQEGVYFSA*FLPDSE
Trigger: TTCGGAATCCGGTAGAAACCAGGCAGAAAAGTAGAC...TCCTTCCTGACTGGTTGTTGTGTAGATGACACTTGTATCAAGAACTACAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CAA 90 bp ATGAATAGCCTCACACATACATACTTTGCACCATTTCCCACAATTTaGCCCAGAGAACTCTGTTTTCCCACGTTGTCTCACAGAAATGGT +
Preference number: 2 (lower is better)
Translates to: MNSLTHTYFAPFPTI*PRELCFPTLSHRNG
Trigger: ACCATTTCTGTGAGACAACGTGGGAAAACAGAGTTCTCTGGGCAAAATTGTGGGAAATGGTGCAAAGTATGTATGTGTGAGGCTATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR GCA 90 bp CACCATCACATTGCTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTCACACATACATACTTTaGACCATTTCCCACAATTTT +
Preference number: 2 (lower is better)
Translates to: HHHIARGQQQQQVTVPFRHTYIL*TISHNF
Trigger: AAAATTGTGGGAAATGGTGCAAAGTATGTATGTGTG...ACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CCA 90 bp AACTTTGTACACAACTCAAGCCATTGTTACACCATCCCACTACGACTCCCTGTATGTAGAGTAAATACTTaGGAACTGGTACCACATGGA +
Preference number: 2 (lower is better)
Translates to: NFVHNSSHCYTIPLRLPVCRVNT*ELVPHG
Trigger: TCCATGTGGTACCAGTTCCCAAGTATTTACTCTACA...TACAGGGAGTCGTAGTGGGATGGTGTAACAATGGCTTGAGTTGTGTACAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR TCA 90 bp TTCAGACCTAGATATACAAATCCACAACTGTCTACATCCCAGGAATACCAAGGAACTATGAACTGGGAGTaGAAGCTCACTCTATACTTT +
Preference number: 2 (lower is better)
Translates to: FRPRYTNPQLSTSQEYQGTMNWE*KLTLYF
Trigger: AAAGTATAGAGTGAGCTTTCACTCCCAGTTCATAGT...TCCTTGGTATTCCTGGGATGTAGACAGTTGTGGATTTGTATATCTAGGTCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR GCA 90 bp GGCTCAGCAACCATTCTTCCCTTTGATGAAAGCCAAACTAGGATGACAAGAGTACACACATACATACTTTaGACCATTTCCCACAATTTT +
Preference number: 2 (lower is better)
Translates to: GSATILPFDESQTRMTRVHTYIL*TISHNF
Trigger: AAAATTGTGGGAAATGGTGCAAAGTATGTATGTGTG...TACTCTTGTCATCCTAGTTTGGCTTTCATCAAAGGGAAGAATGGTTGCTGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CCA 90 bp TTCAGACCTAGATATACAAATCCACAACTGTCTACATCCCAGGAATACCAAGGATGGGCCTTGATTACTTaGGTAACAAAGTTCACTCTT +
Preference number: 2 (lower is better)
Translates to: FRPRYTNPQLSTSQEYQGWALIT*VTKFTL
Trigger: AAGAGTGAACTTTGTTACCCAAGTAATCAAGGCCCA...TCCTTGGTATTCCTGGGATGTAGACAGTTGTGGATTTGTATATCTAGGTCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CAA 90 bp TTTAATGGTCGTTGCTCGTTTTATTATTTGTCCAAAGGCGTTGTATaGGACCGAGGTAGACAAGATAACGTTACATCAGAAATGAGCCAA +
Preference number: 2 (lower is better)
Translates to: FNGRCSFYYLSKGVV*DRGRQDNVTSEMSQ
Trigger: TTGGCTCATTTCTGATGTAACGTTATCTTGTCTACCTCGGTCCAATACAACGCCTTTGGACAAATAATAAAACGAGCAACGACCATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169721.3
3UTR TCA 72 bp GTGCAGGCGCTAACCTCAGAGGCAAGAGCCAAAGTGTaGAGCCCTTTCCAGAGGCAGCAGGAACACCTTCAG +
Preference number: 3 (lower is better)
Translates to: VQALTSEARAKV*SPFQRQQEHLQ
Trigger: CTGAAGGTGTTCCTGCTGCCTCTGGAAAGGGCTTCACACTTTGGCTCTTGCCTCTGAGGTTAGCGCCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR TCA 72 bp ACAGGGCACAGTCAGTCTAAGCCGTGCCTTAGCCATTaGAGGCCTGGCTCTGTCCTCATCTCCTGGTGCCTT +
Preference number: 3 (lower is better)
Translates to: TGHSQSKPCLSH*RPGSVLISWCL
Trigger: AAGGCACCAGGAGATGAGGACAGAGCCAGGCCTTCAATGGCTAAGGCACGGCTTAGACTGACTGTGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR TCA 72 bp CCATTCCTCTCGAGCCAAGGGCCCAAGAGCTCTCTCTaGTTCACCCAGCTTTTCTCAAGCAGAGCACTCATT +
Preference number: 3 (lower is better)
Translates to: PFLSSQGPKSSL*FTQLFSSRALI
Trigger: AATGAGTGCTCTGCTTGAGAAAAGCTGGGTGAATCAGAGAGAGCTCTTGGGCCCTTGGCTCGAGAGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR GCA 72 bp AGACAGAACCCCACGCAGCACGAACCACCATCACATTaGTCGAGGTCAACAACAACAACAAGTCACTGTCCC +
Preference number: 3 (lower is better)
Translates to: RQNPTQHEPPSH*SRSTTTTSHCP
Trigger: GGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTGGTTCGTGCTGCGTGGGGTTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR GCA 72 bp CATCCTAGCTCAAGAAGGGAGGCTGTTCTGAGCAGCTaGAGAAAGAGGTTGGAGGCTGGGCTGCTCAATTTA +
Preference number: 3 (lower is better)
Translates to: HPSSRREAVLSS*RKRLEAGLLNL
Trigger: TAAATTGAGCAGCCCAGCCTCCAACCTCTTTCTGCAGCTGCTCAGAACAGCCTCCCTTCTTGAGCTAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR GCA 72 bp CCTTGGCTCATCCAGAACGCAGAAACCATCTCTCTCTaGCTCCCTGAAGCTGGGATTAAGGATGTGAGAGAG +
Preference number: 3 (lower is better)
Translates to: PWLIQNAETISL*LPEAGIKDVRE
Trigger: CTCTCTCACATCCTTAATCCCAGCTTCAGGGAGGCAGAGAGAGATGGTTTCTGCGTTCTGGATGAGCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR TCA 72 bp TATCTCAAGGAGAAGCAGCAGCCCGTGCGTGAGCCTTaGAGACACCCCCTCTTACATTCTTTGCTTCTGTTC +
Preference number: 3 (lower is better)
Translates to: YLKEKQQPVREP*RHPLLHSLLLF
Trigger: GAACAGAAGCAAAGAATGTAAGAGGGGGTGTCTTCAAGGCTCACGCACGGGCTGCTGCTTCTCCTTGAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR TCA 72 bp TCTCTCTCTGCCTCCCTGAAGCTGGGATTAAGGATGTaGGAGAGACACCACCACCAACTGTTCCTCTCCTTT +
Preference number: 3 (lower is better)
Translates to: SLSASLKLGLRM*ERHHHQLFLSF
Trigger: AAAGGAGAGGAACAGTTGGTGGTGGTGTCTCTCTCACATCCTTAATCCCAGCTTCAGGGAGGCAGAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR GCA 72 bp ATGAGAGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATaGCTGATCACCATCTCTTTCCTGTTTCTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: MRVSGPLLSSSE*LITISFLFLPF
Trigger: GAAAGGAAGAAACAGGAAAGAGATGGTGATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CCA 72 bp GCCTTTCAGTTGGATGCTGTAACCGCACCTACCCTTTaGGGGCTCCACTTTCTATCCCCTCAATTACTAAAG +
Preference number: 3 (lower is better)
Translates to: AFQLDAVTAPTL*GLHFLSPQLLK
Trigger: CTTTAGTAATTGAGGGGATAGAAAGTGGAGCCCCCAAAGGGTAGGTGCGGTTACAGCATCCAACTGAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CAA 90 bp AAGAGAATGCATCCTAGCTCAAGAAGGGAGGCTGTTCTGAGCAGCTGCAGAAAGCTCTGTTTTCCCACGTaGTCTCACAGAAATGGTGAG +
Preference number: 3 (lower is better)
Translates to: KRMHPSSRREAVLSSCRKLCFPT*SHRNGE
Trigger: CTCACCATTTCTGTGAGACAACGTGGGAAAACAGAG...CTTTCTGCAGCTGCTCAGAACAGCCTCCCTTCTTGAGCTAGGATGCATTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR GCA 72 bp CGAGAAATAAATATCTCAAGGAGAAGCAGCAGCCCGTaGGTGAGCCTTGAAGACACCCCCTCTTACATTCTT +
Preference number: 3 (lower is better)
Translates to: REINISRRSSSP*VSLEDTPSYIL
Trigger: AAGAATGTAAGAGGGGGTGTCTTCAAGGCTCACGCACGGGCTGCTGCTTCTCCTTGAGATATTTATTTCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CCA 72 bp GCCGCTTTCACTTTCTCTCTGTGTAGAGTAAATACTTaGGAACTGGTACCACATGGACCCCAACCAGTGAGA +
Preference number: 3 (lower is better)
Translates to: AAFTFSLCRVNT*ELVPHGPQPVR
Trigger: TCTCACTGGTTGGGGTCCATGTGGTACCAGTTCCCAAGTATTTACTCTACACAGAGAGAAAGTGAAAGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CAA 90 bp CACCATCACATTGCTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTCTCTGTTTTCCCACGTaGTCTCACAGAAATGGTGAG +
Preference number: 3 (lower is better)
Translates to: HHHIARGQQQQQVTVPFRLCFPT*SHRNGE
Trigger: CTCACCATTTCTGTGAGACAACGTGGGAAAACAGAG...ACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR TCA 72 bp CAGCCTTTTCTCCTCCGGTTCTTTTTCCTGGGAGAATaGGAGGCTCAGCAACCATTCTTCCCTTTGATGAAA +
Preference number: 3 (lower is better)
Translates to: QPFLLRFFFLGE*EAQQPFFPLMK
Trigger: TTTCATCAAAGGGAAGAATGGTTGCTGAGCCTCTCATTCTCCCAGGAAAAAGAACCGGAGGAGAAAAGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CAA 90 bp AGTCAGCAGAATAACTCTGTTTCCATTCCTCTCGAGCCAAGGGCCCAAGAGCTCATACCAAGGAAAACTTaGTACACAACTCAAGCCATT +
Preference number: 3 (lower is better)
Translates to: SQQNNSVSIPLEPRAQELIPRKT*YTTQAI
Trigger: AATGGCTTGAGTTGTGTACAAAGTTTTCCTTGGTAT...GAGCTCTTGGGCCCTTGGCTCGAGAGGAATGGAAACAGAGTTATTCTGCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CAA 90 bp ACACAGACAAGAGAAAGCTCTGTTCAAGGGGATAGTTTTTCCTTCTGTGTGGGCCCATTTCCCACAATTTaGCCCAGAGAACTCTGTTTT +
Preference number: 3 (lower is better)
Translates to: TQTRESSVQGDSFSFCVGPFPTI*PRELCF
Trigger: AAAACAGAGTTCTCTGGGCAAAATTGTGGGAAATGG...GCCCACACAGAAGGAAAAACTATCCCCTTGAACAGAGCTTTCTCTTGTCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR TCA 72 bp CTATCACTGCTGGTTCCCTTGAGAGTAGGTTCAGCATaGATAGCCTCACACATACATACTTTGCACCATTTC +
Preference number: 3 (lower is better)
Translates to: LSLLVPLRVGSA*IASHIHTLHHF
Trigger: GAAATGGTGCAAAGTATGTATGTGTGAGGCTATTCATGCTGAACCTACTCTCAAGGGAACCAGCAGTGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CAA 90 bp AGAGGCTCAGCAACCATTCTTCCCTTTGATGAAAGCCAAACTAGGATGACAAGACCATTTCCCACAATTTaGCCCAGAGAACTCTGTTTT +
Preference number: 3 (lower is better)
Translates to: RGSATILPFDESQTRMTRPFPTI*PRELCF
Trigger: AAAACAGAGTTCTCTGGGCAAAATTGTGGGAAATGG...TCTTGTCATCCTAGTTTGGCTTTCATCAAAGGGAAGAATGGTTGCTGAGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR TCA 72 bp CAGGCTCTGAGTCCACTTGTCCAATGCATATGCAAATaGGTGAGTTGTAAATGTCTACTTTTCTGCCTGGTT +
Preference number: 3 (lower is better)
Translates to: QALSPLVQCICK*VSCKCLLFCLV
Trigger: AACCAGGCAGAAAAGTAGACATTTACAACTCACTCATTTGCATATGCATTGGACAAGTGGACTCAGAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR-3UTR CAA 90 bp CGTTGCTCGTTTTATTATTTGTCCAAAGGCGTTGTATTGGACCGAGGTAGACAACAACCATTCTTCCCTTaGATGAAAGCCAAACTAGGA +
Preference number: 3 (lower is better)
Translates to: RCSFYYLSKGVVLDRGRQQPFFP*MKAKLG
Trigger: TCCTAGTTTGGCTTTCATCAAAGGGAAGAATGGTTG...TTGTCTACCTCGGTCCAATACAACGCCTTTGGACAAATAATAAAACGAGCAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR TCA 72 bp CCCAGTACTTCATGGAGTCACCCATTCTGTAGAATTTaGTGTAGATCTTGGAGCCAAACAAATTTAGGAAAC +
Preference number: 3 (lower is better)
Translates to: PSTSWSHPFCRI*CRSWSQTNLGN
Trigger: GTTTCCTAAATTTGTTTGGCTCCAAGATCTACATCAAATTCTACAGAATGGGTGACTCCATGAAGTACTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp GCAGACCCACATGAGAGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATCCAGTGTTCCCCTCCTaGGGAACGGCCGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: ADPHESVWPLALKLRMPDPVFPS*GTAGTQ
Trigger: CTGGGTTCCGGCCGTTCCCCAGGAGGGGAACACTGG...ATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACTCTCATGTGGGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp GCAGACCCACATGAGAGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATGCGTGCACTCTCTGGTaGCTGGCCAGGTGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: ADPHESVWPLALKLRMPDACTLW*LARCEL
Trigger: CAGCTCGCACCTGGCCAGCCACCAGAGAGTGCACGC...ATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACTCTCATGTGGGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR TCA 90 bp CTTTCAGTTGGATGCTGTAACCGCACCTACCCTTTGGGGGCTCCACTTTCTATCGGAGGCACGCAGTGCTaGGCCGCAGGACTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSVGCCNRTYPLGAPLSIGGTQC*AAGLSP
Trigger: TGGAGAGAGTCCTGCGGCTCAGCACTGCGTGCCTCC...GATAGAAAGTGGAGCCCCCAAAGGGTAGGTGCGGTTACAGCATCCAACTGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp AGAAGAGGAAGAGAGGAGGCAGACCCACATGAGAGTGTCTGGCCCCTTGCTCTCTCCGGCTGCAAGAAGTaGGGCTGCCATTTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: RRGREEADPHESVWPLALSGCKK*GCHFPV
Trigger: GACTGGGAAATGGCAGCCGCACTTCTTGCAGCCGGA...GAGAGCAAGGGGCCAGACACTCTCATGTGGGTCTGCCTCCTCTCTTCCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp TCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATCACCATCTCTTTCCTGTTTGCGTGCACTCTCTGGTaGCTGGCCAGGTGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: SGPLLSSSECLITISFLFACTLW*LARCEL
Trigger: CAGCTCGCACCTGGCCAGCCACCAGAGAGTGCACGC...AAACAGGAAAGAGATGGTGATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp GATGTGAGAGAGACACCACCACCAACTGTTCCTCTCCTTTGGAGATGCCAAGGGTCTGCGTGCACTCTCTaGTGGCTGGCCAGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: DVRETPPPTVPLLWRCQGSACTL*WLARCE
Trigger: CTCGCACCTGGCCAGCCACCAGAGAGTGCACGCAGA...CCCTTGGCATCTCCAAAGGAGAGGAACAGTTGGTGGTGGTGTCTCTCTCACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR TCA 90 bp GAAAGCCAAACTAGGATGACAAGAGTAACTCCCAGGGCTGTGACCCCTGTCCTGGGGTTTTCTGGTGCCTaGTCAGGTGGTGCCTTCGCC +
Preference number: 4 (lower is better)
Translates to: ESQTRMTRVTPRAVTPVLGFSGA*SGGAFA
Trigger: GGCGAAGGCACCACCTGATCAGGCACCAGAAAACCC...CAGGACAGGGGTCACAGCCCTGGGAGTTACTCTTGTCATCCTAGTTTGGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp GATGTGAGAGAGACACCACCACCAACTGTTCCTCTCCTTTGGAGATGCCAAGGGGACTTGCTGTCTGCGTaGACTCTCTGGTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: DVRETPPPTVPLLWRCQGDLLSA*TLWWLA
Trigger: GGCCAGCCACCAGAGAGTGCACGCAGACAGCAAGTC...CCCTTGGCATCTCCAAAGGAGAGGAACAGTTGGTGGTGGTGTCTCTCTCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp GAAAGCCAAACTAGGATGACAAGAGTAACTCCCAGGGCTGTGACCCCTGTCCTGCAGTGTCTCACCAGGTaGTGCCTCCGGCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: ESQTRMTRVTPRAVTPVLQCLTR*CLRPKL
Trigger: GAGCTTTGGCCGGAGGCACCACCTGGTGAGACACTG...CAGGACAGGGGTCACAGCCCTGGGAGTTACTCTTGTCATCCTAGTTTGGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp AGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATCACCATCTCTTTCCTCAGTGTCTCACCAGGTaGTGCCTCCGGCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: SVWPLALKLRMPDHHLFPQCLTR*CLRPKL
Trigger: GAGCTTTGGCCGGAGGCACCACCTGGTGAGACACTG...AGGAAAGAGATGGTGATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp GCAGACCCACATGAGAGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATAGGTGCCTATCTAGGTaGTGCTTGCGGCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: ADPHESVWPLALKLRMPDRCLSR*CLRPKL
Trigger: GAGCTTTGGCCGCAAGCACCACCTAGATAGGCACCT...ATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACTCTCATGTGGGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp AGTCAGCAGAATAACTCTGTTTCCATTCCTCTCGAGCCAAGGGCCCAAGAGCTCTGGTGGCTGGCCAGGTaGGAGCTGCATCGGAAACTC +
Preference number: 4 (lower is better)
Translates to: SQQNNSVSIPLEPRAQELWWLAR*ELHRKL
Trigger: GAGTTTCCGATGCAGCTCGCACCTGGCCAGCCACCA...GAGCTCTTGGGCCCTTGGCTCGAGAGGAATGGAAACAGAGTTATTCTGCTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp AGAAGAGGAAGAGAGGAGGCAGACCCACATGAGAGTGTCTGGCCCCTTGCTCTCCTCCTGAAGGGACAGTaGCTCGTCTTCAAGACCACA +
Preference number: 4 (lower is better)
Translates to: RRGREEADPHESVWPLALLLKGQ*LVFKTT
Trigger: TGTGGTCTTGAAGACGAGCCACTGTCCCTTCAGGAG...GAGAGCAAGGGGCCAGACACTCTCATGTGGGTCTGCCTCCTCTCTTCCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp GAAAGCCAAACTAGGATGACAAGAGTAACTCCCAGGGCTGTGACCCCTGTCCTGGGGTCAGGGGCCCATTaGTCTTCTCCTCCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: ESQTRMTRVTPRAVTPVLGSGAH*SSPPSC
Trigger: ACAAGAGGGAGGAGAAGACCAATGGGCCCCTGACCC...CAGGACAGGGGTCACAGCCCTGGGAGTTACTCTTGTCATCCTAGTTTGGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp CTCCCTGAAGCTGGGATTAAGGATGTGAGAGAGACACCACCACCAACTGTTCCTGCAGGACTTGCTGTCTaGGTGCACTCTCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LPEAGIKDVRETPPPTVPAGLAV*VHSLVA
Trigger: AGCCACCAGAGAGTGCACGCAGACAGCAAGTCCTGC...AGGAACAGTTGGTGGTGGTGTCTCTCTCACATCCTTAATCCCAGCTTCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp TCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATCACCATCTCTTTCCTGTTTGCAGGACTTGCTGTCTaGGTGCACTCTCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SGPLLSSSECLITISFLFAGLAV*VHSLVA
Trigger: AGCCACCAGAGAGTGCACGCAGACAGCAAGTCCTGC...AAACAGGAAAGAGATGGTGATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp AGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATCACCATCTCTTTCCTTGGTGGGTCAGCAGGTaGCTATCTAGGTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SVWPLALKLRMPDHHLFPWWVSR*LSRWCL
Trigger: CAAGCACCACCTAGATAGGCACCTGCTGACCCACCA...AGGAAAGAGATGGTGATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp AGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATCACCATCTCTTTCCTCAGCTGTGTATTCATTaGCTCCCATCCCGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SVWPLALKLRMPDHHLFPQLCIH*LPSRAQ
Trigger: CTGGGCACGGGATGGGAGCCAATGAATACACAGCTG...AGGAAAGAGATGGTGATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp TGTACACAACTCAAGCCATTGTTACACCATCCCACTACGACTCCCTGTACCACTTCTGCGTGCACTCTCTaGTGGCTGGCCAGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: CTQLKPLLHHPTTTPCTTSACTL*WLARCE
Trigger: CTCGCACCTGGCCAGCCACCAGAGAGTGCACGCAGA...AGTGGTACAGGGAGTCGTAGTGGGATGGTGTAACAATGGCTTGAGTTGTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp AGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATCACCATCTCTTTCCTCATTCAGTGCACACATaGCACTTTGGCACGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SVWPLALKLRMPDHHLFPHSVHT*HFGTGG
Trigger: GCCTCCCGTGCCAAAGTGCCATGTGTGCACTGAATG...AGGAAAGAGATGGTGATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR TCA 90 bp CTCCCTGAAGCTGGGATTAAGGATGTGAGAGAGACACCACCACCAACTGTTCCTTCTTCAAGACCACAGTaGAGGTGCTCCAGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: LPEAGIKDVRETPPPTVPSSRPQ*RCSSGL
Trigger: AAGGCCGCTGGAGCACCTTCACTGTGGTCTTGAAGA...AGGAACAGTTGGTGGTGGTGTCTCTCTCACATCCTTAATCCCAGCTTCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp GATGTGAGAGAGACACCACCACCAACTGTTCCTCTCCTTTGGAGATGCCAAGGGTGCCTGATCAGGTGGTaGCTTCGCCCAAAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: DVRETPPPTVPLLWRCQGCLIRW*LRPKLF
Trigger: GAAAAGCTTTGGGCGAAGGCACCACCTGATCAGGCA...CCCTTGGCATCTCCAAAGGAGAGGAACAGTTGGTGGTGGTGTCTCTCTCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp AGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATCACCATCTCTTTCCTCTCCTGAAGGGACAGTaGCTCGTCTTCAAGACCACA +
Preference number: 4 (lower is better)
Translates to: SVWPLALKLRMPDHHLFPLLKGQ*LVFKTT
Trigger: TGTGGTCTTGAAGACGAGCCACTGTCCCTTCAGGAG...AGGAAAGAGATGGTGATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp CTCCCTGAAGCTGGGATTAAGGATGTGAGAGAGACACCACCACCAACTGTTCCTAGGTGCCTATCTAGGTaGTGCTTGCGGCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LPEAGIKDVRETPPPTVPRCLSR*CLRPKL
Trigger: GAGCTTTGGCCGCAAGCACCACCTAGATAGGCACCT...AGGAACAGTTGGTGGTGGTGTCTCTCTCACATCCTTAATCCCAGCTTCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR TCA 90 bp GCAGACCCACATGAGAGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATTCTCCTCCCTCTTGTTaGGAAAGCATGTCCAATTTG +
Preference number: 4 (lower is better)
Translates to: ADPHESVWPLALKLRMPDSPPSC*ESMSNL
Trigger: CAAATTGGACATGCTTTCTCAACAAGAGGGAGGAGA...ATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACTCTCATGTGGGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR TCA 90 bp AGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATCACCATCTCTTTCCTCGTCTCCTGTATATGTaGCCTTCAGGATGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SVWPLALKLRMPDHHLFPRLLYM*PSGCPF
Trigger: GAAGGGACATCCTGAAGGTCACATATACAGGAGACG...AGGAAAGAGATGGTGATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp AGTCAGCAGAATAACTCTGTTTCCATTCCTCTCGAGCCAAGGGCCCAAGAGCTCCCAGGGAACAGAAGTTaGCTTCTCCTGAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: SQQNNSVSIPLEPRAQELPGNRS*LLLKGQ
Trigger: CTGTCCCTTCAGGAGAAGGCAACTTCTGTTCCCTGG...GAGCTCTTGGGCCCTTGGCTCGAGAGGAATGGAAACAGAGTTATTCTGCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp AGTCAGCAGAATAACTCTGTTTCCATTCCTCTCGAGCCAAGGGCCCAAGAGCTCTGCCTGATCAGGTGGTaGCTTCGCCCAAAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SQQNNSVSIPLEPRAQELCLIRW*LRPKLF
Trigger: GAAAAGCTTTGGGCGAAGGCACCACCTGATCAGGCA...GAGCTCTTGGGCCCTTGGCTCGAGAGGAATGGAAACAGAGTTATTCTGCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp GAAAGCCAAACTAGGATGACAAGAGTAACTCCCAGGGCTGTGACCCCTGTCCTGCTGCTTGGCTTGTCATaGAGATGGGTTTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ESQTRMTRVTPRAVTPVLLLGLS*RWVFWC
Trigger: GCACCAGAAAACCCATCTGCATGACAAGCCAAGCAG...CAGGACAGGGGTCACAGCCCTGGGAGTTACTCTTGTCATCCTAGTTTGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp CTTTCAGTTGGATGCTGTAACCGCACCTACCCTTTGGGGGCTCCACTTTCTATCCGCACTCAGAGCACCTaGTTGGCTTGTCATGCAGAT +
Preference number: 4 (lower is better)
Translates to: LSVGCCNRTYPLGAPLSIRTQST*LACHAD
Trigger: ATCTGCATGACAAGCCAAGCAGGTGCTCTGAGTGCG...GATAGAAAGTGGAGCCCCCAAAGGGTAGGTGCGGTTACAGCATCCAACTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp AAGAGAATGCATCCTAGCTCAAGAAGGGAGGCTGTTCTGAGCAGCTGCAGAAAGTGCATCGGAAACTCTTaGCGCACTCAGAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: KRMHPSSRREAVLSSCRKCIGNS*RTQSTC
Trigger: GCAGGTGCTCTGAGTGCGGCAAGAGTTTCCGATGCA...CTTTCTGCAGCTGCTCAGAACAGCCTCCCTTCTTGAGCTAGGATGCATTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp CACCATCACATTGCTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTGCTTGGACCCTGCCCTaGGTTCCAGAGAGCAGTATC +
Preference number: 4 (lower is better)
Translates to: HHHIARGQQQQQVTVPFRAWTLP*VPESSI
Trigger: GATACTGCTCTCTGGAACCCAGGGCAGGGTCCAAGC...ACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp ACACAGACAAGAGAAAGCTCTGTTCAAGGGGATAGTTTTTCCTTCTGTGTGGGCCATGGACTCCCAGCTTaGACCCTGCCCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: TQTRESSVQGDSFSFCVGHGLPA*TLPWVP
Trigger: TGGAACCCAGGGCAGGGTCCAAGCTGGGAGTCCATG...GCCCACACAGAAGGAAAAACTATCCCCTTGAACAGAGCTTTCTCTTGTCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp GATGTGAGAGAGACACCACCACCAACTGTTCCTCTCCTTTGGAGATGCCAAGGGTTAGGAGCATTCCTGTaGAGTTCCTGGGCATGGACT +
Preference number: 4 (lower is better)
Translates to: DVRETPPPTVPLLWRCQGLGAFL*SSWAWT
Trigger: AGTCCATGCCCAGGAACTCCACAGGAATGCTCCTAA...CCCTTGGCATCTCCAAAGGAGAGGAACAGTTGGTGGTGGTGTCTCTCTCACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp GATGTGAGAGAGACACCACCACCAACTGTTCCTCTCCTTTGGAGATGCCAAGGGGGCTTGTCATGCAGATaGGTTTTCTGGTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: DVRETPPPTVPLLWRCQGGLSCR*VFWCLI
Trigger: GATCAGGCACCAGAAAACCCATCTGCATGACAAGCC...CCCTTGGCATCTCCAAAGGAGAGGAACAGTTGGTGGTGGTGTCTCTCTCACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp GAAAGCCAAACTAGGATGACAAGAGTAACTCCCAGGGCTGTGACCCCTGTCCTGGGCTTGTCATGCAGATaGGTTTTCTGGTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: ESQTRMTRVTPRAVTPVLGLSCR*VFWCLI
Trigger: GATCAGGCACCAGAAAACCCATCTGCATGACAAGCC...CAGGACAGGGGTCACAGCCCTGGGAGTTACTCTTGTCATCCTAGTTTGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp TTTTCAGACAGGATCTCATTACATTGCCTTGGCTCATCCAGAACGCAGAAACCAGCACTCTCTGGTGGCTaGCCAGGTGCGAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: FSDRISLHCLGSSRTQKPALSGG*PGASCI
Trigger: GATGCAGCTCGCACCTGGCCAGCCACCAGAGAGTGC...TGGTTTCTGCGTTCTGGATGAGCCAAGGCAATGTAATGAGATCCTGTCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR TCA 90 bp GGCTCAGCAACCATTCTTCCCTTTGATGAAAGCCAAACTAGGATGACAAGAGTAGGGTTTTCTGGTGCCTaGTCAGGTGGTGCCTTCGCC +
Preference number: 4 (lower is better)
Translates to: GSATILPFDESQTRMTRVGFSGA*SGGAFA
Trigger: GGCGAAGGCACCACCTGATCAGGCACCAGAAAACCC...TACTCTTGTCATCCTAGTTTGGCTTTCATCAAAGGGAAGAATGGTTGCTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp AAGAGAATGCATCCTAGCTCAAGAAGGGAGGCTGTTCTGAGCAGCTGCAGAAAGCGCACTCAGAGCACCTaGTTGGCTTGTCATGCAGAT +
Preference number: 4 (lower is better)
Translates to: KRMHPSSRREAVLSSCRKRTQST*LACHAD
Trigger: ATCTGCATGACAAGCCAAGCAGGTGCTCTGAGTGCG...CTTTCTGCAGCTGCTCAGAACAGCCTCCCTTCTTGAGCTAGGATGCATTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp TCCCTTGAGAGTAGGTTCAGCATGAATAGCCTCACACATACATACTTTGCACCATGGTGGCTGGCCAGGTaGGAGCTGCATCGGAAACTC +
Preference number: 4 (lower is better)
Translates to: SLESRFSMNSLTHTYFAPWWLAR*ELHRKL
Trigger: GAGTTTCCGATGCAGCTCGCACCTGGCCAGCCACCA...TGGTGCAAAGTATGTATGTGTGAGGCTATTCATGCTGAACCTACTCTCAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp TTTTCAGACAGGATCTCATTACATTGCCTTGGCTCATCCAGAACGCAGAAACCAGACTTGCTGTCTGCGTaGACTCTCTGGTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: FSDRISLHCLGSSRTQKPDLLSA*TLWWLA
Trigger: GGCCAGCCACCAGAGAGTGCACGCAGACAGCAAGTC...TGGTTTCTGCGTTCTGGATGAGCCAAGGCAATGTAATGAGATCCTGTCTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp AAGAGAATGCATCCTAGCTCAAGAAGGGAGGCTGTTCTGAGCAGCTGCAGAAAGTGCCTATCTAGGTGGTaGTTGCGGCCAAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KRMHPSSRREAVLSSCRKCLSRW*LRPKLF
Trigger: GAAGAGCTTTGGCCGCAAGCACCACCTAGATAGGCA...CTTTCTGCAGCTGCTCAGAACAGCCTCCCTTCTTGAGCTAGGATGCATTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp TTTTCAGACAGGATCTCATTACATTGCCTTGGCTCATCCAGAACGCAGAAACCACTCCGCCACTCCTCCTaGGATCCGGCTGCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: FSDRISLHCLGSSRTQKPLRHSS*DPAARS
Trigger: ACTTCTTGCAGCCGGATCCCAGGAGGAGTGGCGGAG...TGGTTTCTGCGTTCTGGATGAGCCAAGGCAATGTAATGAGATCCTGTCTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023722.12
CDS-3UTR CCA 90 bp ACACAGACAAGAGAAAGCTCTGTTCAAGGGGATAGTTTTTCCTTCTGTGTGGGCGGGTCAGGGGCCCATTaGTCTTCTCCTCCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: TQTRESSVQGDSFSFCVGGSGAH*SSPPSC
Trigger: ACAAGAGGGAGGAGAAGACCAATGGGCCCCTGACCC...GCCCACACAGAAGGAAAAACTATCCCCTTGAACAGAGCTTTCTCTTGTCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp CACCATCACATTGCTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTTTCCTGTGGAGTTCCTaGGCATGGACTCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: HHHIARGQQQQQVTVPFRFLWSS*AWTPSL
Trigger: CAAGCTGGGAGTCCATGCCCAGGAACTCCACAGGAA...ACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp CGTTGCTCGTTTTATTATTTGTCCAAAGGCGTTGTATTGGACCGAGGTAGACAAGCACTCTCTGGTGGCTaGCCAGGTGCGAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: RCSFYYLSKGVVLDRGRQALSGG*PGASCI
Trigger: GATGCAGCTCGCACCTGGCCAGCCACCAGAGAGTGC...TTGTCTACCTCGGTCCAATACAACGCCTTTGGACAAATAATAAAACGAGCAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp CACCATCACATTGCTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTCATTCAGTGCACACATaGCACTTTGGCACGGGAGGC +
Preference number: 4 (lower is better)
Translates to: HHHIARGQQQQQVTVPFRHSVHT*HFGTGG
Trigger: GCCTCCCGTGCCAAAGTGCCATGTGTGCACTGAATG...ACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CAA 72 bp AAGACAGAACCCCACGCAGCACGAACCACCATCACATaGCTCGAGGTCAACAACAACAACAAGTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: KTEPHAARTTIT*LEVNNNNKSLS
Trigger: GGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTGGTTCGTGCTGCGTGGGGTTCTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR TCA 90 bp TCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATCACCATCTCTTTCCTGTTTAACTGTTTCCCACATTaGGGGCACGTGTGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SGPLLSSSECLITISFLFNCFPH*GHVCGF
Trigger: AAAACCACACACGTGCCCTCAATGTGGGAAACAGTT...AAACAGGAAAGAGATGGTGATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR TCA 90 bp CTCCCTGAAGCTGGGATTAAGGATGTGAGAGAGACACCACCACCAACTGTTCCTAACTGTTTCCCACATTaGGGGCACGTGTGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LPEAGIKDVRETPPPTVPNCFPH*GHVCGF
Trigger: AAAACCACACACGTGCCCTCAATGTGGGAAACAGTT...AGGAACAGTTGGTGGTGGTGTCTCTCTCACATCCTTAATCCCAGCTTCAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp TCCCTTGAGAGTAGGTTCAGCATGAATAGCCTCACACATACATACTTTGCACCATCCGGCTGCAAGAAGTaGGGCTGCCATTTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SLESRFSMNSLTHTYFAPSGCKK*GCHFPV
Trigger: GACTGGGAAATGGCAGCCGCACTTCTTGCAGCCGGA...TGGTGCAAAGTATGTATGTGTGAGGCTATTCATGCTGAACCTACTCTCAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp CACCATCACATTGCTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTTGCCTATCTAGGTGGTaGTTGCGGCCAAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: HHHIARGQQQQQVTVPFRCLSRW*LRPKLF
Trigger: GAAGAGCTTTGGCCGCAAGCACCACCTAGATAGGCA...ACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp AGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATCACCATCTCTTTCCTAAAGCATGTCCAATTTaGGGATGGGAAACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SVWPLALKLRMPDHHLFPKACPI*GWETSE
Trigger: CTCTGAGGTTTCCCATCCCCAAATTGGACATGCTTT...AGGAAAGAGATGGTGATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp AACTTTGTACACAACTCAAGCCATTGTTACACCATCCCACTACGACTCCCTGTAGCTTGGACCCTGCCCTaGGTTCCAGAGAGCAGTATC +
Preference number: 4 (lower is better)
Translates to: NFVHNSSHCYTIPLRLPVAWTLP*VPESSI
Trigger: GATACTGCTCTCTGGAACCCAGGGCAGGGTCCAAGC...TACAGGGAGTCGTAGTGGGATGGTGTAACAATGGCTTGAGTTGTGTACAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp TGCCTTGTAGTTCTTGATACAAGTGTCATCTACACAACAACCAGTCAGGAAGGACATGGACTCCCAGCTTaGACCCTGCCCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: CLVVLDTSVIYTTTSQEGHGLPA*TLPWVP
Trigger: TGGAACCCAGGGCAGGGTCCAAGCTGGGAGTCCATG...TCCTTCCTGACTGGTTGTTGTGTAGATGACACTTGTATCAAGAACTACAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp AACTTTGTACACAACTCAAGCCATTGTTACACCATCCCACTACGACTCCCTGTATGGAGTTCCTGGGCATaGACTCCCAGCTTGGACCCT +
Preference number: 4 (lower is better)
Translates to: NFVHNSSHCYTIPLRLPVWSSWA*TPSLDP
Trigger: AGGGTCCAAGCTGGGAGTCCATGCCCAGGAACTCCA...TACAGGGAGTCGTAGTGGGATGGTGTAACAATGGCTTGAGTTGTGTACAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp GGCTCAGCAACCATTCTTCCCTTTGATGAAAGCCAAACTAGGATGACAAGAGTATGGAGTTCCTGGGCATaGACTCCCAGCTTGGACCCT +
Preference number: 4 (lower is better)
Translates to: GSATILPFDESQTRMTRVWSSWA*TPSLDP
Trigger: AGGGTCCAAGCTGGGAGTCCATGCCCAGGAACTCCA...TACTCTTGTCATCCTAGTTTGGCTTTCATCAAAGGGAAGAATGGTTGCTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp TTTTCAGACAGGATCTCATTACATTGCCTTGGCTCATCCAGAACGCAGAAACCAGGACTCTGTCCCTGGTaGGTCAGCAGGTGCCTATCT +
Preference number: 4 (lower is better)
Translates to: FSDRISLHCLGSSRTQKPGLCPW*VSRCLS
Trigger: AGATAGGCACCTGCTGACCCACCAGGGACAGAGTCC...TGGTTTCTGCGTTCTGGATGAGCCAAGGCAATGTAATGAGATCCTGTCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp TCCCTTGAGAGTAGGTTCAGCATGAATAGCCTCACACATACATACTTTGCACCAGGACTCTGTCCCTGGTaGGTCAGCAGGTGCCTATCT +
Preference number: 4 (lower is better)
Translates to: SLESRFSMNSLTHTYFAPGLCPW*VSRCLS
Trigger: AGATAGGCACCTGCTGACCCACCAGGGACAGAGTCC...TGGTGCAAAGTATGTATGTGTGAGGCTATTCATGCTGAACCTACTCTCAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR TCA 90 bp AGAGGCTCAGCAACCATTCTTCCCTTTGATGAAAGCCAAACTAGGATGACAAGATCTTCAAGACCACAGTaGAGGTGCTCCAGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: RGSATILPFDESQTRMTRSSRPQ*RCSSGL
Trigger: AAGGCCGCTGGAGCACCTTCACTGTGGTCTTGAAGA...TCTTGTCATCCTAGTTTGGCTTTCATCAAAGGGAAGAATGGTTGCTGAGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp TTCAGACCTAGATATACAAATCCACAACTGTCTACATCCCAGGAATACCAAGGATCCCAGCTTGGACCCTaGCCTGGGTTCCAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: FRPRYTNPQLSTSQEYQGSQLGP*PGFQRA
Trigger: TGCTCTCTGGAACCCAGGGCAGGGTCCAAGCTGGGA...TCCTTGGTATTCCTGGGATGTAGACAGTTGTGGATTTGTATATCTAGGTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp CACCATCACATTGCTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTAGATGGGTTTTCTGGTaGCTGATCAGGTGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: HHHIARGQQQQQVTVPFRRWVFW*LIRWCL
Trigger: AAGGCACCACCTGATCAGGCACCAGAAAACCCATCT...ACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp TGTACACAACTCAAGCCATTGTTACACCATCCCACTACGACTCCCTGTACCACTAGATGGGTTTTCTGGTaGCTGATCAGGTGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: CTQLKPLLHHPTTTPCTTRWVFW*LIRWCL
Trigger: AAGGCACCACCTGATCAGGCACCAGAAAACCCATCT...AGTGGTACAGGGAGTCGTAGTGGGATGGTGTAACAATGGCTTGAGTTGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp AAGAGAATGCATCCTAGCTCAAGAAGGGAGGCTGTTCTGAGCAGCTGCAGAAAGTCTTCCCACATTCAGTaGACACATGGCACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: KRMHPSSRREAVLSSCRKSSHIQ*THGTLA
Trigger: TGCCAAAGTGCCATGTGTGCACTGAATGTGGGAAGA...CTTTCTGCAGCTGCTCAGAACAGCCTCCCTTCTTGAGCTAGGATGCATTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp AAGAGAATGCATCCTAGCTCAAGAAGGGAGGCTGTTCTGAGCAGCTGCAGAAAGTGTCCAATTTGGGGATaGGAAACCTCAGAGAGACGA +
Preference number: 4 (lower is better)
Translates to: KRMHPSSRREAVLSSCRKCPIWG*ETSERR
Trigger: TCGTCTCTCTGAGGTTTCCCATCCCCAAATTGGACA...CTTTCTGCAGCTGCTCAGAACAGCCTCCCTTCTTGAGCTAGGATGCATTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp AACTTTGTACACAACTCAAGCCATTGTTACACCATCCCACTACGACTCCCTGTATGGTGCCTGATCAGGTaGTGCCTTCGCCCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: NFVHNSSHCYTIPLRLPVWCLIR*CLRPKL
Trigger: AAGCTTTGGGCGAAGGCACCACCTGATCAGGCACCA...TACAGGGAGTCGTAGTGGGATGGTGTAACAATGGCTTGAGTTGTGTACAAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CAA 72 bp TGCCTTTCAGTTGGATGCTGTAACCGCACCTACCCTTaGGGGGCTCCACTTTCTATCCCCTCAATTACTAAA +
Preference number: 4 (lower is better)
Translates to: CLSVGCCNRTYP*GAPLSIPSITK
Trigger: TTTAGTAATTGAGGGGATAGAAAGTGGAGCCCCCAAAGGGTAGGTGCGGTTACAGCATCCAACTGAAAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp AACTTTGTACACAACTCAAGCCATTGTTACACCATCCCACTACGACTCCCTGTACCAGGGAACAGAAGTTaGCTTCTCCTGAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: NFVHNSSHCYTIPLRLPVPGNRS*LLLKGQ
Trigger: CTGTCCCTTCAGGAGAAGGCAACTTCTGTTCCCTGG...TACAGGGAGTCGTAGTGGGATGGTGTAACAATGGCTTGAGTTGTGTACAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp TGCCTTGTAGTTCTTGATACAAGTGTCATCTACACAACAACCAGTCAGGAAGGATGCATCGGAAACTCTTaGCGCACTCAGAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: CLVVLDTSVIYTTTSQEGCIGNS*RTQSTC
Trigger: GCAGGTGCTCTGAGTGCGGCAAGAGTTTCCGATGCA...TCCTTCCTGACTGGTTGTTGTGTAGATGACACTTGTATCAAGAACTACAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp CAGGGATTCAGACCTAGATATACAAATCCACAACTGTCTACATCCCAGGAATACCAGCTGTGTATTCATTaGCTCCCATCCCGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: QGFRPRYTNPQLSTSQEYQLCIH*LPSRAQ
Trigger: CTGGGCACGGGATGGGAGCCAATGAATACACAGCTG...GTATTCCTGGGATGTAGACAGTTGTGGATTTGTATATCTAGGTCTGAATCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp CACCATCACATTGCTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTTGTCCAATTTGGGGATaGGAAACCTCAGAGAGACGA +
Preference number: 4 (lower is better)
Translates to: HHHIARGQQQQQVTVPFRCPIWG*ETSERR
Trigger: TCGTCTCTCTGAGGTTTCCCATCCCCAAATTGGACA...ACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp CAGGGATTCAGACCTAGATATACAAATCCACAACTGTCTACATCCCAGGAATACTTCCTGTGGAGTTCCTaGGCATGGACTCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QGFRPRYTNPQLSTSQEYFLWSS*AWTPSL
Trigger: CAAGCTGGGAGTCCATGCCCAGGAACTCCACAGGAA...GTATTCCTGGGATGTAGACAGTTGTGGATTTGTATATCTAGGTCTGAATCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR TCA 90 bp AGTCAGCAGAATAACTCTGTTTCCATTCCTCTCGAGCCAAGGGCCCAAGAGCTCCACAGTTTTCCTGCATaGCATATTCTCCGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: SQQNNSVSIPLEPRAQELHSFPA*HILRKS
Trigger: ACTTTTACGGAGAATATGTCATGCAGGAAAACTGTG...GAGCTCTTGGGCCCTTGGCTCGAGAGGAATGGAAACAGAGTTATTCTGCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR TCA 90 bp TCCCTTGAGAGTAGGTTCAGCATGAATAGCCTCACACATACATACTTTGCACCACGTCTCCTGTATATGTaGCCTTCAGGATGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SLESRFSMNSLTHTYFAPRLLYM*PSGCPF
Trigger: GAAGGGACATCCTGAAGGTCACATATACAGGAGACG...TGGTGCAAAGTATGTATGTGTGAGGCTATTCATGCTGAACCTACTCTCAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp TTCAGACCTAGATATACAAATCCACAACTGTCTACATCCCAGGAATACCAAGGATGGTGGGTCAGCAGGTaGCTATCTAGGTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: FRPRYTNPQLSTSQEYQGWWVSR*LSRWCL
Trigger: CAAGCACCACCTAGATAGGCACCTGCTGACCCACCA...TCCTTGGTATTCCTGGGATGTAGACAGTTGTGGATTTGTATATCTAGGTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp CTCCCTGAAGCTGGGATTAAGGATGTGAGAGAGACACCACCACCAACTGTTCCTTATCTTCAGTCACACTaGATAATGTTCTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LPEAGIKDVRETPPPTVPYLQSH*IMFWEV
Trigger: AACCTCCCAGAACATTATCCAGTGTGACTGAAGATA...AGGAACAGTTGGTGGTGGTGTCTCTCTCACATCCTTAATCCCAGCTTCAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp AACTTTGTACACAACTCAAGCCATTGTTACACCATCCCACTACGACTCCCTGTATTAGGAGCATTCCTGTaGAGTTCCTGGGCATGGACT +
Preference number: 4 (lower is better)
Translates to: NFVHNSSHCYTIPLRLPVLGAFL*SSWAWT
Trigger: AGTCCATGCCCAGGAACTCCACAGGAATGCTCCTAA...TACAGGGAGTCGTAGTGGGATGGTGTAACAATGGCTTGAGTTGTGTACAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp TTCAGACCTAGATATACAAATCCACAACTGTCTACATCCCAGGAATACCAAGGATGGTGCCTGATCAGGTaGTGCCTTCGCCCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: FRPRYTNPQLSTSQEYQGWCLIR*CLRPKL
Trigger: AAGCTTTGGGCGAAGGCACCACCTGATCAGGCACCA...TCCTTGGTATTCCTGGGATGTAGACAGTTGTGGATTTGTATATCTAGGTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp CGTTGCTCGTTTTATTATTTGTCCAAAGGCGTTGTATTGGACCGAGGTAGACAATGCAGATGGGTTTTCTaGTGCCTGATCAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RCSFYYLSKGVVLDRGRQCRWVF*CLIRWC
Trigger: GCACCACCTGATCAGGCACCAGAAAACCCATCTGCA...TTGTCTACCTCGGTCCAATACAACGCCTTTGGACAAATAATAAAACGAGCAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp TGCCTTGTAGTTCTTGATACAAGTGTCATCTACACAACAACCAGTCAGGAAGGATGCAGATGGGTTTTCTaGTGCCTGATCAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: CLVVLDTSVIYTTTSQEGCRWVF*CLIRWC
Trigger: GCACCACCTGATCAGGCACCAGAAAACCCATCTGCA...TCCTTCCTGACTGGTTGTTGTGTAGATGACACTTGTATCAAGAACTACAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CAA 72 bp CCCACAATTTTGCCCAGAGAACTCTGTTTTCCCACGTaGTCTCACAGAAATGGTGAGAAATACTCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PTILPRELCFPT*SHRNGEKYSGP
Trigger: AGGGCCAGAGTATTTCTCACCATTTCTGTGAGACAACGTGGGAAAACAGAGTTCTCTGGGCAAAATTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp TTCAGACCTAGATATACAAATCCACAACTGTCTACATCCCAGGAATACCAAGGACTGCTTGGCTTGTCATaGAGATGGGTTTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FRPRYTNPQLSTSQEYQGLLGLS*RWVFWC
Trigger: GCACCAGAAAACCCATCTGCATGACAAGCCAAGCAG...TCCTTGGTATTCCTGGGATGTAGACAGTTGTGGATTTGTATATCTAGGTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CAA 72 bp GAATACCAAGGAAAACTTTGTACACAACTCAAGCCATaGTTACACCATCCCACTACGACTCCCTGTACCACT +
Preference number: 4 (lower is better)
Translates to: EYQGKLCTQLKP*LHHPTTTPCTT
Trigger: AGTGGTACAGGGAGTCGTAGTGGGATGGTGTAACAATGGCTTGAGTTGTGTACAAAGTTTTCCTTGGTATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CAA 72 bp GTATTAAAGTGGGCGAGTTTTCTCATTCTCATCACATaGACTCTAGAACGACTCCAATCCCCGGAGACTAAG +
Preference number: 4 (lower is better)
Translates to: VLKWASFLILIT*TLERLQSPETK
Trigger: CTTAGTCTCCGGGGATTGGAGTCGTTCTAGAGTCAATGTGATGAGAATGAGAAAACTCGCCCACTTTAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR GCA 90 bp TTCAGACCTAGATATACAAATCCACAACTGTCTACATCCCAGGAATACCAAGGATCTTCCCACATTCAGTaGACACATGGCACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: FRPRYTNPQLSTSQEYQGSSHIQ*THGTLA
Trigger: TGCCAAAGTGCCATGTGTGCACTGAATGTGGGAAGA...TCCTTGGTATTCCTGGGATGTAGACAGTTGTGGATTTGTATATCTAGGTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp CGTTGCTCGTTTTATTATTTGTCCAAAGGCGTTGTATTGGACCGAGGTAGACAAAAAGCATGTCCAATTTaGGGATGGGAAACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RCSFYYLSKGVVLDRGRQKACPI*GWETSE
Trigger: CTCTGAGGTTTCCCATCCCCAAATTGGACATGCTTT...TTGTCTACCTCGGTCCAATACAACGCCTTTGGACAAATAATAAAACGAGCAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CAA 72 bp ACAACTGTCTACATCCCAGGAATACCAAGGAAAACTTaGTACACAACTCAAGCCATTGTTACACCATCCCAC +
Preference number: 4 (lower is better)
Translates to: TTVYIPGIPRKT*YTTQAIVTPSH
Trigger: GTGGGATGGTGTAACAATGGCTTGAGTTGTGTACAAAGTTTTCCTTGGTATTCCTGGGATGTAGACAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR TCA 90 bp TGCCTTGTAGTTCTTGATACAAGTGTCATCTACACAACAACCAGTCAGGAAGGACACAGTTTTCCTGCATaGCATATTCTCCGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: CLVVLDTSVIYTTTSQEGHSFPA*HILRKS
Trigger: ACTTTTACGGAGAATATGTCATGCAGGAAAACTGTG...TCCTTCCTGACTGGTTGTTGTGTAGATGACACTTGTATCAAGAACTACAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CCA 90 bp CGTTGCTCGTTTTATTATTTGTCCAAAGGCGTTGTATTGGACCGAGGTAGACAATATCTTCAGTCACACTaGATAATGTTCTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RCSFYYLSKGVVLDRGRQYLQSH*IMFWEV
Trigger: AACCTCCCAGAACATTATCCAGTGTGACTGAAGATA...TTGTCTACCTCGGTCCAATACAACGCCTTTGGACAAATAATAAAACGAGCAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CAA 72 bp CGTTGCTCGTTTTATTATTTGTCCAAAGGCGTTGTATaGGACCGAGGTAGACAAGATAACGTTACATCAGAA +
Preference number: 4 (lower is better)
Translates to: RCSFYYLSKGVV*DRGRQDNVTSE
Trigger: TTCTGATGTAACGTTATCTTGTCTACCTCGGTCCAATACAACGCCTTTGGACAAATAATAAAACGAGCAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
3UTR CAA 72 bp ATGGTCGTTGCTCGTTTTATTATTTGTCCAAAGGCGTaGTATTGGACCGAGGTAGACAAGATAACGTTACAT +
Preference number: 4 (lower is better)
Translates to: MVVARFIICPKA*YWTEVDKITLH
Trigger: ATGTAACGTTATCTTGTCTACCTCGGTCCAATACAACGCCTTTGGACAAATAATAAAACGAGCAACGACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS GCA 90 bp CAGGCTCCGCCACTCCTCCTGGGATCCGGCTGCAAGAAGTGCGGCTaGCATTTCCCAGTCTCCAGTGTTCCCCTCCTGGGGAACGGCCGG +
Preference number: 5 (lower is better)
Translates to: QAPPLLLGSGCKKCG*HFPVSSVPLLGNGR
Trigger: CCGGCCGTTCCCCAGGAGGGGAACACTGGAGACTGGGAAATGGCAGCCGCACTTCTTGCAGCCGGATCCCAGGAGGAGTGGCGGAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023722.12
CDS GCA 90 bp GCACGCAGTGCTGAGCCGCAGGACTCTCTCCAAAGTCTTGGCCCTTaGAGGACTTGCTGTCTGCGTGCACTCTCTGGTGGCTGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: ARSAEPQDSLQSLGP*RTCCLRALSGGWPG
Trigger: ACCTGGCCAGCCACCAGAGAGTGCACGCAGACAGCAAGTCCTGCAAGGGCCAAGACTTTGGAGAGAGTCCTGCGGCTCAGCACTGCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 90 bp CCTCCTGAAGGAAGCGTGGGCTTAGGAGCATTCCTGTGGAGTTCCTaGGCATGGACTCCCAGCTTGGACCCTGCCCTGGGTTCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: PPEGSVGLGAFLWSS*AWTPSLDPALGSRE
Trigger: CTCTCTGGAACCCAGGGCAGGGTCCAAGCTGGGAGTCCATGCCCAGGAACTCCACAGGAATGCTCCTAAGCCCACGCTTCCTTCAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 90 bp AGAAGGTGTCCTCCTGAAGGAAGCGTGGGCTTAGGAGCATTCCTGTaGAGTTCCTGGGCATGGACTCCCAGCTTGGACCCTGCCCTGGGT +
Preference number: 5 (lower is better)
Translates to: RRCPPEGSVGLGAFL*SSWAWTPSLDPALG
Trigger: ACCCAGGGCAGGGTCCAAGCTGGGAGTCCATGCCCAGGAACTCCACAGGAATGCTCCTAAGCCCACGCTTCCTTCAGGAGGACACCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CAA 90 bp GCAGACCCACATGAGAGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATGGGGTCAGGGGCCCATaGGTCTTCTCCTCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: ADPHESVWPLALKLRMPDGVRGP*VFSSLL
Trigger: CAAGAGGGAGGAGAAGACCAATGGGCCCCTGACCCC...ATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACTCTCATGTGGGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS GCA 90 bp GCACTCTCTGGTGGCTGGCCAGGTGCGAGCTGCATCGGAAACTCTTaGCGCACTCAGAGCACCTGCTTGGCTTGTCATGCAGATGGGTTT +
Preference number: 5 (lower is better)
Translates to: ALSGGWPGASCIGNS*RTQSTCLACHADGF
Trigger: AAACCCATCTGCATGACAAGCCAAGCAGGTGCTCTGAGTGCGGCAAGAGTTTCCGATGCAGCTCGCACCTGGCCAGCCACCAGAGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 90 bp GGTGCTGTTCTCCACGAGCCCTCTTCCCGGGTCCCTCTTTCTGACTaGAGTTCTGCCGCATCCAGCTGTGTATTCATTGGCTCCCATCCC +
Preference number: 5 (lower is better)
Translates to: GAVLHEPSSRVPLSD*SSAASSCVFIGSHP
Trigger: GGGATGGGAGCCAATGAATACACAGCTGGATGCGGCAGAACTCCAGTCAGAAAGAGGGACCCGGGAAGAGGGCTCGTGGAGAACAGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 90 bp GAAGGAAGCGTGGGCTTAGGAGCATTCCTGTGGAGTTCCTGGGCATaGACTCCCAGCTTGGACCCTGCCCTGGGTTCCAGAGAGCAGTAT +
Preference number: 5 (lower is better)
Translates to: EGSVGLGAFLWSSWA*TPSLDPALGSREQY
Trigger: ATACTGCTCTCTGGAACCCAGGGCAGGGTCCAAGCTGGGAGTCCATGCCCAGGAACTCCACAGGAATGCTCCTAAGCCCACGCTTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS TCA 90 bp CCTTGGTGCTGTTCTCCACGAGCCCTCTTCCCGGGTCCCTCTTTCTaGCTGGAGTTCTGCCGCATCCAGCTGTGTATTCATTGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: PWCCSPRALFPGPSF*LEFCRIQLCIHWLP
Trigger: TGGGAGCCAATGAATACACAGCTGGATGCGGCAGAACTCCAGTCAGAAAGAGGGACCCGGGAAGAGGGCTCGTGGAGAACAGCACCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CAA 90 bp TCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATCACCATCTCTTTCCTGTTTGCATGGACTCCCAGCTaGGACCCTGCCCTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: SGPLLSSSECLITISFLFAWTPS*DPALGS
Trigger: GGAACCCAGGGCAGGGTCCAAGCTGGGAGTCCATGC...AAACAGGAAAGAGATGGTGATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS TCA 90 bp GCTCAGGAGTATCACCCTGGGGTTCACCTCCGTCTCCTGTATATGTaGCCTTCAGGATGTCCCTTCCTTCTACATCCTGGGGGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: AQEYHPGVHLRLLYM*PSGCPFLLHPGGQG
Trigger: CCCCTGACCCCCAGGATGTAGAAGGAAGGGACATCCTGAAGGTCACATATACAGGAGACGGAGGTGAACCCCAGGGTGATACTCCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS TCA 90 bp GAGTCTGTGTCTGTTCTGTGTAGATGGCGAGAGAAGGTGTCCTCCTaGAGGAAGCGTGGGCTTAGGAGCATTCCTGTGGAGTTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: ESVSVLCRWREKVSS*RKRGLRSIPVEFLG
Trigger: GCCCAGGAACTCCACAGGAATGCTCCTAAGCCCACGCTTCCTTCAGGAGGACACCTTCTCTCGCCATCTACACAGAACAGACACAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CAA 90 bp CACCATCACATTGCTCGAGGTCAACAACAACAACAAGTCACTGTCCCTTTCCGTGCATGGACTCCCAGCTaGGACCCTGCCCTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: HHHIARGQQQQQVTVPFRAWTPS*DPALGS
Trigger: GGAACCCAGGGCAGGGTCCAAGCTGGGAGTCCATGC...ACGGAAAGGGACAGTGACTTGTTGTTGTTGTTGACCTCGAGCAATGTGATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS GCA 90 bp AGCATTCCTGTGGAGTTCCTGGGCATGGACTCCCAGCTTGGACCCTaGCCTGGGTTCCAGAGAGCAGTATCTTCAGTCACACTGGATAAT +
Preference number: 5 (lower is better)
Translates to: SIPVEFLGMDSQLGP*PGFQRAVSSVTLDN
Trigger: ATTATCCAGTGTGACTGAAGATACTGCTCTCTGGAACCCAGGGCAGGGTCCAAGCTGGGAGTCCATGCCCAGGAACTCCACAGGAATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 90 bp AAACTCTTGCCGCACTCAGAGCACCTGCTTGGCTTGTCATGCAGATaGGTTTTCTGGTGCCTGATCAGGTGGTGCCTTCGCCCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: KLLPHSEHLLGLSCR*VFWCLIRWCLRPKL
Trigger: AAGCTTTGGGCGAAGGCACCACCTGATCAGGCACCAGAAAACCCATCTGCATGACAAGCCAAGCAGGTGCTCTGAGTGCGGCAAGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CAA 90 bp AGTCAGCAGAATAACTCTGTTTCCATTCCTCTCGAGCCAAGGGCCCAAGAGCTCCTGCATCGGAAACTCTaGCCGCACTCAGAGCACCTG +
Preference number: 5 (lower is better)
Translates to: SQQNNSVSIPLEPRAQELLHRKL*PHSEHL
Trigger: CAGGTGCTCTGAGTGCGGCAAGAGTTTCCGATGCAG...GAGCTCTTGGGCCCTTGGCTCGAGAGGAATGGAAACAGAGTTATTCTGCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CAA 90 bp GAAAGCCAAACTAGGATGACAAGAGTAACTCCCAGGGCTGTGACCCCTGTCCTGGAGCACCTGCTTGGCTaGTCATGCAGATGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: ESQTRMTRVTPRAVTPVLEHLLG*SCRWVF
Trigger: GAAAACCCATCTGCATGACAAGCCAAGCAGGTGCTC...CAGGACAGGGGTCACAGCCCTGGGAGTTACTCTTGTCATCCTAGTTTGGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CAA 90 bp AGTCAGCAGAATAACTCTGTTTCCATTCCTCTCGAGCCAAGGGCCCAAGAGCTCACTCAGAGCACCTGCTaGGCTTGTCATGCAGATGGG +
Preference number: 5 (lower is better)
Translates to: SQQNNSVSIPLEPRAQELTQSTC*ACHADG
Trigger: CCCATCTGCATGACAAGCCAAGCAGGTGCTCTGAGT...GAGCTCTTGGGCCCTTGGCTCGAGAGGAATGGAAACAGAGTTATTCTGCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 90 bp TTGGACCCTGCCCTGGGTTCCAGAGAGCAGTATCTTCAGTCACACTaGATAATGTTCTGGGAGGTTCCACCTGTAGCTCAGGAGTATCAC +
Preference number: 5 (lower is better)
Translates to: LDPALGSREQYLQSH*IMFWEVPPVAQEYH
Trigger: GTGATACTCCTGAGCTACAGGTGGAACCTCCCAGAACATTATCCAGTGTGACTGAAGATACTGCTCTCTGGAACCCAGGGCAGGGTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CAA 90 bp AGTGTCTGGCCCCTTGCTCTCAAGCTCCGAATGCCTGATCACCATCTCTTTCCTGAAAGCATGTCCAATTaGGGGATGGGAAACCTCAGA +
Preference number: 5 (lower is better)
Translates to: SVWPLALKLRMPDHHLFPESMSN*GMGNLR
Trigger: TCTGAGGTTTCCCATCCCCAAATTGGACATGCTTTC...AGGAAAGAGATGGTGATCAGGCATTCGGAGCTTGAGAGCAAGGGGCCAGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CAA 90 bp AAGAGAATGCATCCTAGCTCAAGAAGGGAGGCTGTTCTGAGCAGCTGCAGAAAGGAGCACCTGCTTGGCTaGTCATGCAGATGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: KRMHPSSRREAVLSSCRKEHLLG*SCRWVF
Trigger: GAAAACCCATCTGCATGACAAGCCAAGCAGGTGCTC...CTTTCTGCAGCTGCTCAGAACAGCCTCCCTTCTTGAGCTAGGATGCATTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CAA 90 bp ACACAGACAAGAGAAAGCTCTGTTCAAGGGGATAGTTTTTCCTTCTGTGTGGGCACTCAGAGCACCTGCTaGGCTTGTCATGCAGATGGG +
Preference number: 5 (lower is better)
Translates to: TQTRESSVQGDSFSFCVGTQSTC*ACHADG
Trigger: CCCATCTGCATGACAAGCCAAGCAGGTGCTCTGAGT...GCCCACACAGAAGGAAAAACTATCCCCTTGAACAGAGCTTTCTCTTGTCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CAA 90 bp AACTTTGTACACAACTCAAGCCATTGTTACACCATCCCACTACGACTCCCTGTACTGCATCGGAAACTCTaGCCGCACTCAGAGCACCTG +
Preference number: 5 (lower is better)
Translates to: NFVHNSSHCYTIPLRLPVLHRKL*PHSEHL
Trigger: CAGGTGCTCTGAGTGCGGCAAGAGTTTCCGATGCAG...TACAGGGAGTCGTAGTGGGATGGTGTAACAATGGCTTGAGTTGTGTACAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CAA 90 bp AACTTTGTACACAACTCAAGCCATTGTTACACCATCCCACTACGACTCCCTGTAGTCTTCTCCTCCCTCTaGTTGAGAAAGCATGTCCAA +
Preference number: 5 (lower is better)
Translates to: NFVHNSSHCYTIPLRLPVVFSSL*LRKHVQ
Trigger: TTGGACATGCTTTCTCAACAAGAGGGAGGAGAAGAC...TACAGGGAGTCGTAGTGGGATGGTGTAACAATGGCTTGAGTTGTGTACAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CAA 90 bp TGCCTTGTAGTTCTTGATACAAGTGTCATCTACACAACAACCAGTCAGGAAGGAGAAAGCATGTCCAATTaGGGGATGGGAAACCTCAGA +
Preference number: 5 (lower is better)
Translates to: CLVVLDTSVIYTTTSQEGESMSN*GMGNLR
Trigger: TCTGAGGTTTCCCATCCCCAAATTGGACATGCTTTC...TCCTTCCTGACTGGTTGTTGTGTAGATGACACTTGTATCAAGAACTACAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS-3UTR CAA 90 bp TGCCTTGTAGTTCTTGATACAAGTGTCATCTACACAACAACCAGTCAGGAAGGAGTCTTCTCCTCCCTCTaGTTGAGAAAGCATGTCCAA +
Preference number: 5 (lower is better)
Translates to: CLVVLDTSVIYTTTSQEGVFSSL*LRKHVQ
Trigger: TTGGACATGCTTTCTCAACAAGAGGGAGGAGAAGAC...TCCTTCCTGACTGGTTGTTGTGTAGATGACACTTGTATCAAGAACTACAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CAA 90 bp CACGGGAGGCACGCAGTGCTGAGCCGCAGGACTCTCTCCAAAGTCTaGGCCCTTGCAGGACTTGCTGTCTGCGTGCACTCTCTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: HGRHAVLSRRTLSKV*ALAGLAVCVHSLVA
Trigger: AGCCACCAGAGAGTGCACGCAGACAGCAAGTCCTGCAAGGGCCAAGACTTTGGAGAGAGTCCTGCGGCTCAGCACTGCGTGCCTCCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 72 bp GTCTTCAAGACCACAGTGAAGGTGCTCCAGCGGCCTTaGTGCTGTTCTCCACGAGCCCTCTTCCCGGGTCCC +
Preference number: 6 (lower is better)
Translates to: VFKTTVKVLQRP*CCSPRALFPGP
Trigger: GGGACCCGGGAAGAGGGCTCGTGGAGAACAGCACCAAGGCCGCTGGAGCACCTTCACTGTGGTCTTGAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 72 bp GGAAGCGTGGGCTTAGGAGCATTCCTGTGGAGTTCCTaGGCATGGACTCCCAGCTTGGACCCTGCCCTGGGT +
Preference number: 6 (lower is better)
Translates to: GSVGLGAFLWSS*AWTPSLDPALG
Trigger: ACCCAGGGCAGGGTCCAAGCTGGGAGTCCATGCCCAGGAACTCCACAGGAATGCTCCTAAGCCCACGCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CAA 72 bp CGTCTTCAAGACCACAGTGAAGGTGCTCCAGCGGCCTaGGTGCTGTTCTCCACGAGCCCTCTTCCCGGGTCC +
Preference number: 6 (lower is better)
Translates to: RLQDHSEGAPAA*VLFSTSPLPGS
Trigger: GGACCCGGGAAGAGGGCTCGTGGAGAACAGCACCAAGGCCGCTGGAGCACCTTCACTGTGGTCTTGAAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS GCA 72 bp TTCAAGACCACAGTGAAGGTGCTCCAGCGGCCTTGGTaGTGTTCTCCACGAGCCCTCTTCCCGGGTCCCTCT +
Preference number: 6 (lower is better)
Translates to: FKTTVKVLQRPW*CSPRALFPGPS
Trigger: AGAGGGACCCGGGAAGAGGGCTCGTGGAGAACAGCACCAAGGCCGCTGGAGCACCTTCACTGTGGTCTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS GCA 72 bp CCAAAGTCTTGGCCCTTGCAGGACTTGCTGTCTGCGTaGACTCTCTGGTGGCTGGCCAGGTGCGAGCTGCAT +
Preference number: 6 (lower is better)
Translates to: PKSWPLQDLLSA*TLWWLARCELH
Trigger: ATGCAGCTCGCACCTGGCCAGCCACCAGAGAGTGCACGCAGACAGCAAGTCCTGCAAGGGCCAAGACTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 72 bp CCCTTGCAGGACTTGCTGTCTGCGTGCACTCTCTGGTaGCTGGCCAGGTGCGAGCTGCATCGGAAACTCTTG +
Preference number: 6 (lower is better)
Translates to: PLQDLLSACTLW*LARCELHRKLL
Trigger: CAAGAGTTTCCGATGCAGCTCGCACCTGGCCAGCCACCAGAGAGTGCACGCAGACAGCAAGTCCTGCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CAA 90 bp ACAGTGGCTCGTCTTCAAGACCACAGTGAAGGTGCTCCAGCGGCCTaGGTGCTGTTCTCCACGAGCCCTCTTCCCGGGTCCCTCTTTCTG +
Preference number: 6 (lower is better)
Translates to: TVARLQDHSEGAPAA*VLFSTSPLPGSLFL
Trigger: CAGAAAGAGGGACCCGGGAAGAGGGCTCGTGGAGAACAGCACCAAGGCCGCTGGAGCACCTTCACTGTGGTCTTGAAGACGAGCCACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 72 bp CCTCCTGAAGGAAGCGTGGGCTTAGGAGCATTCCTGTaGAGTTCCTGGGCATGGACTCCCAGCTTGGACCCT +
Preference number: 6 (lower is better)
Translates to: PPEGSVGLGAFL*SSWAWTPSLDP
Trigger: AGGGTCCAAGCTGGGAGTCCATGCCCAGGAACTCCACAGGAATGCTCCTAAGCCCACGCTTCCTTCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS GCA 72 bp GTGGAGTTCCTGGGCATGGACTCCCAGCTTGGACCCTaGCCTGGGTTCCAGAGAGCAGTATCTTCAGTCACA +
Preference number: 6 (lower is better)
Translates to: VEFLGMDSQLGP*PGFQRAVSSVT
Trigger: TGTGACTGAAGATACTGCTCTCTGGAACCCAGGGCAGGGTCCAAGCTGGGAGTCCATGCCCAGGAACTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 72 bp CTCCACGAGCCCTCTTCCCGGGTCCCTCTTTCTGACTaGAGTTCTGCCGCATCCAGCTGTGTATTCATTGGC +
Preference number: 6 (lower is better)
Translates to: LHEPSSRVPLSD*SSAASSCVFIG
Trigger: GCCAATGAATACACAGCTGGATGCGGCAGAACTCCAGTCAGAAAGAGGGACCCGGGAAGAGGGCTCGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 72 bp GTTCCTGGGCATGGACTCCCAGCTTGGACCCTGCCCTaGGTTCCAGAGAGCAGTATCTTCAGTCACACTGGA +
Preference number: 6 (lower is better)
Translates to: VPGHGLPAWTLP*VPESSIFSHTG
Trigger: TCCAGTGTGACTGAAGATACTGCTCTCTGGAACCCAGGGCAGGGTCCAAGCTGGGAGTCCATGCCCAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 72 bp CATTCCTGTGGAGTTCCTGGGCATGGACTCCCAGCTTaGACCCTGCCCTGGGTTCCAGAGAGCAGTATCTTC +
Preference number: 6 (lower is better)
Translates to: HSCGVPGHGLPA*TLPWVPESSIF
Trigger: GAAGATACTGCTCTCTGGAACCCAGGGCAGGGTCCAAGCTGGGAGTCCATGCCCAGGAACTCCACAGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CAA 72 bp CTGACTGGAGTTCTGCCGCATCCAGCTGTGTATTCATaGGCTCCCATCCCGTGCCCAGGCCTACAGCCTGTT +
Preference number: 6 (lower is better)
Translates to: LTGVLPHPAVYS*APIPCPGLQPV
Trigger: AACAGGCTGTAGGCCTGGGCACGGGATGGGAGCCAATGAATACACAGCTGGATGCGGCAGAACTCCAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CAA 90 bp TCCCTCTTTCTGACTGGAGTTCTGCCGCATCCAGCTGTGTATTCATaGGCTCCCATCCCGTGCCCAGGCCTACAGCCTGTTCCGAAAGCA +
Preference number: 6 (lower is better)
Translates to: SLFLTGVLPHPAVYS*APIPCPGLQPVPKA
Trigger: TGCTTTCGGAACAGGCTGTAGGCCTGGGCACGGGATGGGAGCCAATGAATACACAGCTGGATGCGGCAGAACTCCAGTCAGAAAGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS TCA 72 bp TGTTCTCCACGAGCCCTCTTCCCGGGTCCCTCTTTCTaGCTGGAGTTCTGCCGCATCCAGCTGTGTATTCAT +
Preference number: 6 (lower is better)
Translates to: CSPRALFPGPSF*LEFCRIQLCIH
Trigger: ATGAATACACAGCTGGATGCGGCAGAACTCCAGTCAGAAAGAGGGACCCGGGAAGAGGGCTCGTGGAGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 72 bp CTGGGAGGTTCCACCTGTAGCTCAGGAGTATCACCCTaGGGTTCACCTCCGTCTCCTGTATATGTGACCTTC +
Preference number: 6 (lower is better)
Translates to: LGGSTCSSGVSP*GSPPSPVYVTF
Trigger: GAAGGTCACATATACAGGAGACGGAGGTGAACCCCAGGGTGATACTCCTGAGCTACAGGTGGAACCTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CAA 72 bp GTCCCTTCCTTCTACATCCTGGGGGTCAGGGGCCCATaGGTCTTCTCCTCCCTCTTGTTGAGAAAGCATGTC +
Preference number: 6 (lower is better)
Translates to: VPSFYILGVRGP*VFSSLLLRKHV
Trigger: GACATGCTTTCTCAACAAGAGGGAGGAGAAGACCAATGGGCCCCTGACCCCCAGGATGTAGAAGGAAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS TCA 72 bp TCTGTTCTGTGTAGATGGCGAGAGAAGGTGTCCTCCTaGAGGAAGCGTGGGCTTAGGAGCATTCCTGTGGAG +
Preference number: 6 (lower is better)
Translates to: SVLCRWREKVSS*RKRGLRSIPVE
Trigger: CTCCACAGGAATGCTCCTAAGCCCACGCTTCCTTCAGGAGGACACCTTCTCTCGCCATCTACACAGAACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 72 bp GCATCGGAAACTCTTGCCGCACTCAGAGCACCTGCTTaGCTTGTCATGCAGATGGGTTTTCTGGTGCCTGAT +
Preference number: 6 (lower is better)
Translates to: ASETLAALRAPA*LVMQMGFLVPD
Trigger: ATCAGGCACCAGAAAACCCATCTGCATGACAAGCCAAGCAGGTGCTCTGAGTGCGGCAAGAGTTTCCGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS TCA 72 bp TATCACCCTGGGGTTCACCTCCGTCTCCTGTATATGTaGCCTTCAGGATGTCCCTTCCTTCTACATCCTGGG +
Preference number: 6 (lower is better)
Translates to: YHPGVHLRLLYM*PSGCPFLLHPG
Trigger: CCCAGGATGTAGAAGGAAGGGACATCCTGAAGGTCACATATACAGGAGACGGAGGTGAACCCCAGGGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3
CDS CCA 72 bp GCCCTGGGTTCCAGAGAGCAGTATCTTCAGTCACACTaGATAATGTTCTGGGAGGTTCCACCTGTAGCTCAG +
Preference number: 6 (lower is better)
Translates to: ALGSREQYLQSH*IMFWEVPPVAQ
Trigger: CTGAGCTACAGGTGGAACCTCCCAGAACATTATCCAGTGTGACTGAAGATACTGCTCTCTGGAACCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023722.12
ENSMUST00000169721.3