Pregenerated sensors for ZFP64 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027551Ensembl transcript IDs: ENSMUST00000087971.11, ENSMUST00000109161.3, ENSMUST00000109162.9, ENSMUST00000124599.2
Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACGGGCTGCCAAGCTCTAGAAGAGAAGGCAAGGTCCTCCCTACAGTaGCGGGCTGGCATCGGCGCTGTCAGACTCCTGAGAGGCCACCCA | + |
|
Preference number: 1 (lower is better) Translates to: TGCQALEEKARSSLQ*RAGIGAVRLLRGHP Trigger: TGGGTGGCCTCTCAGGAGTCTGACAGCGCCGATGCCAGCCCGTCACTGTAGGGAGGACCTTGCCTTCTCTTCTAGAGCTTGGCAGCCCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| 3UTR GCA 90 bp | AATCTCAACTCCCAGGCAGCGGCTTTCCCCAGCGGGGTGGACTTGTaGTTAGTGGAGCCCACCTTTGGATGGCTGAGGCCACAGGGCACT | + |
|
Preference number: 1 (lower is better) Translates to: NLNSQAAAFPSGVDL*LVEPTFGWLRPQGT Trigger: AGTGCCCTGTGGCCTCAGCCATCCAAAGGTGGGCTCCACTAAGCACAAGTCCACCCCGCTGGGGAAAGCCGCTGCCTGGGAGTTGAGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| 3UTR CCA 90 bp | GGCTTTCCCCAGCGGGGTGGACTTGTGCTTAGTGGAGCCCACCTTTaGATGGCTGAGGCCACAGGGCACTCAGGGAATGCTTGTAGAGAA | + |
|
Preference number: 1 (lower is better) Translates to: GFPQRGGLVLSGAHL*MAEATGHSGNACRE Trigger: TTCTCTACAAGCATTCCCTGAGTGCCCTGTGGCCTCAGCCATCCAAAGGTGGGCTCCACTAAGCACAAGTCCACCCCGCTGGGGAAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| 3UTR CCA 90 bp | TTCCCCAGCGGGGTGGACTTGTGCTTAGTGGAGCCCACCTTTGGATaGCTGAGGCCACAGGGCACTCAGGGAATGCTTGTAGAGAAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: FPSGVDLCLVEPTFG*LRPQGTQGMLVEKE Trigger: TTCCTTCTCTACAAGCATTCCCTGAGTGCCCTGTGGCCTCAGCCATCCAAAGGTGGGCTCCACTAAGCACAAGTCCACCCCGCTGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| 3UTR TCA 90 bp | CTAGCAGCCGCTACCCAGGTTAAGACAGGATTTTACCACACATCCTaGCAGAGCACGGGCTCCTTTCTTCCCCCACACAGCTCAGTTCAG | + |
|
Preference number: 1 (lower is better) Translates to: LAAATQVKTGFYHTS*QSTGSFLPPHSSVQ Trigger: CTGAACTGAGCTGTGTGGGGGAAGAAAGGAGCCCGTGCTCTGTCAGGATGTGTGGTAAAATCCTGTCTTAACCTGGGTAGCGGCTGCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTCAGTCATCGCGCTGTCAGACTCCTaGGAGGCCACCCATCCACCT | + |
|
Preference number: 2 (lower is better) Translates to: TGHSGNACREGTELCSVIALSDS*EATHPP Trigger: AGGTGGATGGGTGGCCTCTCAGGAGTCTGACAGCGC...GATGACTGAACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| 3UTR CCA 72 bp | AGAAGAGAAGGCAAGGTCCTCCCTACAGTGACGGGCTaGCATCGGCGCTGTCAGACTCCTGAGAGGCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: RREGKVLPTVTG*HRRCQTPERPP Trigger: GGGTGGCCTCTCAGGAGTCTGACAGCGCCGATGCCAGCCCGTCACTGTAGGGAGGACCTTGCCTTCTCTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| 3UTR CCA 72 bp | CAGCGGGGTGGACTTGTGCTTAGTGGAGCCCACCTTTaGATGGCTGAGGCCACAGGGCACTCAGGGAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: QRGGLVLSGAHL*MAEATGHSGNA Trigger: AGCATTCCCTGAGTGCCCTGTGGCCTCAGCCATCCAAAGGTGGGCTCCACTAAGCACAAGTCCACCCCGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| 3UTR TCA 72 bp | CAAGCTCTAGAAGAGAAGGCAAGGTCCTCCCTACAGTaGCGGGCTGGCATCGGCGCTGTCAGACTCCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: QALEEKARSSLQ*RAGIGAVRLLR Trigger: TCTCAGGAGTCTGACAGCGCCGATGCCAGCCCGTCACTGTAGGGAGGACCTTGCCTTCTCTTCTAGAGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| 3UTR CCA 72 bp | GGGGTGGACTTGTGCTTAGTGGAGCCCACCTTTGGATaGCTGAGGCCACAGGGCACTCAGGGAATGCTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GVDLCLVEPTFG*LRPQGTQGMLV Trigger: TACAAGCATTCCCTGAGTGCCCTGTGGCCTCAGCCATCCAAAGGTGGGCTCCACTAAGCACAAGTCCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| 3UTR TCA 72 bp | GCTACCCAGGTTAAGACAGGATTTTACCACACATCCTaGCAGAGCACGGGCTCCTTTCTTCCCCCACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: ATQVKTGFYHTS*QSTGSFLPPHS Trigger: GCTGTGTGGGGGAAGAAAGGAGCCCGTGCTCTGTCAGGATGTGTGGTAAAATCCTGTCTTAACCTGGGTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTCTCTCGCAGTTTGTCTaGTCTGTCACCCCTCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SPTVVNSNSTLESALVTILSQFV*SVTPPS Trigger: GGAGGGAGGGGTGACAGACAAGACAAACTGCGAGAG...AATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR TCA 90 bp | CCTCGGTTAACCGCTCCACTGCTGGAGGCTGGGGAGGACGGGCTGCCAAGCTCTCTTCCAAGGACAGAGTaGCTGCAGGGGCCTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRLTAPLLEAGEDGLPSSLPRTE*LQGPAG Trigger: CCCAGCAGGCCCCTGCAGTCACTCTGTCCTTGGAAG...AGAGCTTGGCAGCCCGTCCTCCCCAGCCTCCAGCAGTGGAGCGGTTAACCGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCAAGGTCCTCCCTACAGTGACGGGCTGGCATCGGCGCTGTCAGACTCCCGTTGGGCACGTGGTTaGGACCGCTCTCCCCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRQGPPYSDGLASALSDSRWARG*DRSPRD Trigger: GTCCCGGGGAGAGCGGTCCCAACCACGTGCCCAACG...GGAGTCTGACAGCGCCGATGCCAGCCCGTCACTGTAGGGAGGACCTTGCCTTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR TCA 90 bp | CTTGCGTTGGCACCTATGCCCTCGGTTAACCGCTCCACTGCTGGAGGCTGGGGACAGCCGAGTCTCTTCTaGGCAGGGGGTGCTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LALAPMPSVNRSTAGGWGQPSLF*AGGAVG Trigger: GCCCACAGCACCCCCTGCTCAGAAGAGACTCGGCTG...TCCCCAGCCTCCAGCAGTGGAGCGGTTAACCGAGGGCATAGGTGCCAACGCAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | AACTCCCAGGCAGCGGCTTTCCCCAGCGGGGTGGACTTGTGCTTAGTGGAGCCCGATGTGGATGTCCGGTaGCAGCTCCACCAGCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: NSQAAAFPSGVDLCLVEPDVDVR*QLHQHR Trigger: ACGGTGCTGGTGGAGCTGGCACCGGACATCCACATC...GGGCTCCACTAAGCACAAGTCCACCCCGCTGGGGAAAGCCGCTGCCTGGGAGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGGGAGGACGGGCTGCCAAGCTCTAGAAGAGAAGGCAAGGTCCTCCCTACAAGCACAGAGGCCGTGTaGGAGCGCAGGTGCACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGEDGLPSSRREGKVLPTSTEAV*ERRCTV Trigger: CACCGTGCACCTGCGCTCGCACACGGCCTCTGTGCT...TGTAGGGAGGACCTTGCCTTCTCTTCTAGAGCTTGGCAGCCCGTCCTCCCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | AATCTCAACTCCCAGGCAGCGGCTTTCCCCAGCGGGGTGGACTTGTGCTTAGTGGTGCTCCAGCAGGTCTaGCCGGTCCCGGCCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLNSQAAAFPSGVDLCLVVLQQV*PVPALE Trigger: TTCCAGGGCCGGGACCGGGCAGACCTGCTGGAGCAC...CACTAAGCACAAGTCCACCCCGCTGGGGAAAGCCGCTGCCTGGGAGTTGAGATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | AACTCCCAGGCAGCGGCTTTCCCCAGCGGGGTGGACTTGTGCTTAGTGGAGCCCGCTCCACCAGCACCGTaGTGCCTCCTGGGATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSQAAAFPSGVDLCLVEPAPPAP*CLLGFA Trigger: TGCAAATCCCAGGAGGCACCACGGTGCTGGTGGAGC...GGGCTCCACTAAGCACAAGTCCACCCCGCTGGGGAAAGCCGCTGCCTGGGAGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCAAGGTCCTCCCTACAGTGACGGGCTGGCATCGGCGCTGTCAGACTCCGGCTTGACGCCCGTGTaGCAGCGCATGTGCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRQGPPYSDGLASALSDSGLTPV*QRMCVF Trigger: GAAGACGCACATGCGCTGCCACACGGGCGTCAAGCC...GGAGTCTGACAGCGCCGATGCCAGCCCGTCACTGTAGGGAGGACCTTGCCTTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR TCA 90 bp | CCTATGCCCTCGGTTAACCGCTCCACTGCTGGAGGCTGGGGAGGACGGGCTGCCTCTGAGTCTCTGAACTaGTGGTCGTTGTGGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PMPSVNRSTAGGWGGRAASESLN*WSLWWS Trigger: AGACCACCACAACGACCATCAGTTCAGAGACTCAGA...GGCAGCCCGTCCTCCCCAGCCTCCAGCAGTGGAGCGGTTAACCGAGGGCATAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | ACCGCTCCACTGCTGGAGGCTGGGGAGGACGGGCTGCCAAGCTCTAGAAGAGAAGAGCAGGGGGTGCTGTaGGCTTTTTGGTGCGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: TAPLLEAGEDGLPSSRREEQGVL*AFWCVT Trigger: AGTCACGCACCAAAAAGCCCACAGCACCCCCTGCTC...TTCTCTTCTAGAGCTTGGCAGCCCGTCCTCCCCAGCCTCCAGCAGTGGAGCGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | AACTCCCAGGCAGCGGCTTTCCCCAGCGGGGTGGACTTGTGCTTAGTGGAGCCCGGCTTGTCGCCTGTGTaGATTCTTAGATGGCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSQAAAFPSGVDLCLVEPGLSPV*ILRWRS Trigger: GGACCGCCATCTAAGAATCCACACAGGCGACAAGCC...GGGCTCCACTAAGCACAAGTCCACCCCGCTGGGGAAAGCCGCTGCCTGGGAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | ACCGCTCCACTGCTGGAGGCTGGGGAGGACGGGCTGCCAAGCTCTAGAAGAGAAGAGTGGATGCGCAGGTaGTTGTTAAGGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAPLLEAGEDGLPSSRREEWMRR*LLRLLL Trigger: CAGCAGCAGCCTTAACAAGCACCTGCGCATCCACTC...TTCTCTTCTAGAGCTTGGCAGCCCGTCCTCCCCAGCCTCCAGCAGTGGAGCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | AATCTCAACTCCCAGGCAGCGGCTTTCCCCAGCGGGGTGGACTTGTGCTTAGTGCAAGGACAGAGTGACTaGAGGGGCCTGCTGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: NLNSQAAAFPSGVDLCLVQGQSD*RGLLGI Trigger: GATGCCCAGCAGGCCCCTGCAGTCACTCTGTCCTTG...CACTAAGCACAAGTCCACCCCGCTGGGGAAAGCCGCTGCCTGGGAGTTGAGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCCACAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTGGGGTGTCCCCCGTGTaGGAGCGCAGGTGCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRPQGTQGMLVEKELSCVGVSPV*ERRCTV Trigger: CACAGTGCACCTGCGCTCGCACACGGGGGACACCCC...AACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTGTGGCCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | AATCTCAACTCCCAGGCAGCGGCTTTCCCCAGCGGGGTGGACTTGTGCTTAGTGTCCTCTGCCACAAACTaGACCGTGCTGGGGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NLNSQAAAFPSGVDLCLVSSATN*TVLGAV Trigger: GACAGCCCCCAGCACGGTCCAGTTTGTGGCAGAGGA...CACTAAGCACAAGTCCACCCCGCTGGGGAAAGCCGCTGCCTGGGAGTTGAGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | AACTCCCAGGCAGCGGCTTTCCCCAGCGGGGTGGACTTGTGCTTAGTGGAGCCCTGTCAGTGCTCTCCGTaGGCAGGTAAGTTTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSQAAAFPSGVDLCLVEPCQCSP*AGKFGS Trigger: GCTACCAAACTTACCTGCCCACGGAGAGCACTGACA...GGGCTCCACTAAGCACAAGTCCACCCCGCTGGGGAAAGCCGCTGCCTGGGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | CCTCGGTTAACCGCTCCACTGCTGGAGGCTGGGGAGGACGGGCTGCCAAGCTCTTCCTTTCTCCAAGGGTaGCCGTTCTCTCCTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRLTAPLLEAGEDGLPSSSFLQG*PFSPLL Trigger: AAGCAAAGGAGAGAACGGCCACCCTTGGAGAAAGGA...AGAGCTTGGCAGCCCGTCCTCCCCAGCCTCCAGCAGTGGAGCGGTTAACCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | ACCGCTCCACTGCTGGAGGCTGGGGAGGACGGGCTGCCAAGCTCTAGAAGAGAAGTTTGGCCAGGCTGCTaGGCCGCTTTGTATCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAPLLEAGEDGLPSSRREVWPGC*AALYQS Trigger: GCTTTGATACAAAGCGGCCCAGCAGCCTGGCCAAAC...TTCTCTTCTAGAGCTTGGCAGCCCGTCCTCCCCAGCCTCCAGCAGTGGAGCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCACAGTACTCCTCTCGCAGTTTGTCTTGTCTGTCACCCCTCCCTCCAGAGCAGGACAGTTGGCTaGCTCAGGGCACCTGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ASHSTPLAVCLVCHPSLQSRTVG*LRAPAS Trigger: CGAAGCAGGTGCCCTGAGTCAGCCAACTGTCCTGCT...CTGGAGGGAGGGGTGACAGACAAGACAAACTGCGAGAGGAGTACTGTGAGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR TCA 90 bp | GGGGAGGACGGGCTGCCAAGCTCTAGAAGAGAAGGCAAGGTCCTCCCTACAGTGTGCAGAAGTCACATTTaGAGGGCCGGTCCGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GEDGLPSSRREGKVLPTVCRSHI*RAGPCS Trigger: ACTGCACGGACCGGCCCTTCAAATGTGACTTCTGCA...CACTGTAGGGAGGACCTTGCCTTCTCTTCTAGAGCTTGGCAGCCCGTCCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGGCAAGGTCCTCCCTACAGTGACGGGCTGGCATCGGCGCTGTCAGACTCCTCCAGATTGCTGAAGTaGTGCTTACAGAGGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRQGPPYSDGLASALSDSSRLLK*CLQRPQ Trigger: CTGCGGCCTCTGTAAGCAGCACTTCAGCAATCTGGA...GGAGTCTGACAGCGCCGATGCCAGCCCGTCACTGTAGGGAGGACCTTGCCTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | GGGGAGGACGGGCTGCCAAGCTCTAGAAGAGAAGGCAAGGTCCTCCCTACAGTGAGGCTCTGTCTCCTCTaGCACAAACTGGACCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GEDGLPSSRREGKVLPTVRLCLL*HKLDRA Trigger: AGCACGGTCCAGTTTGTGGCAGAGGAGACAGAGCCT...CACTGTAGGGAGGACCTTGCCTTCTCTTCTAGAGCTTGGCAGCCCGTCCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCACAGTACTCCTCTCGCAGTTTGTCTTGTCTGTCACCCCTCCCTCCAGTGGTGGCCACTGCGATaGTCTGGTCCCCATCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASHSTPLAVCLVCHPSLQWWPLR*SGPHRS Trigger: TGAGCGATGGGGACCAGAGCATCGCAGTGGCCACCA...CTGGAGGGAGGGGTGACAGACAAGACAAACTGCGAGAGGAGTACTGTGAGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | GAAGGAACTGAGCTGTGTTCAGTCATCCCTGTGACCTTGCGTTGGCACCTATGCCCGTGCAGTGGACTCTaGTGTGTACGCGCAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EGTELCSVIPVTLRWHLCPCSGL*CVRAGR Trigger: CCGCCCTGCGCGTACACAGCAGAGTCCACTGCACGG...GCATAGGTGCCAACGCAAGGTCACAGGGATGACTGAACACAGCTCAGTTCCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | CTTGCGTTGGCACCTATGCCCTCGGTTAACCGCTCCACTGCTGGAGGCTGGGGATGTGTTTGGCCAGGCTaGTGGGCCGCTTTGTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LALAPMPSVNRSTAGGWGCVWPG*WAALYQ Trigger: TTGATACAAAGCGGCCCAGCAGCCTGGCCAAACACA...TCCCCAGCCTCCAGCAGTGGAGCGGTTAACCGAGGGCATAGGTGCCAACGCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCACAGTACTCCTCTCGCAGTTTGTCTTGTCTGTCACCCCTCCCTCCAGGCTCCACCAGCACCGTaGTGCCTCCTGGGATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASHSTPLAVCLVCHPSLQAPPAP*CLLGFA Trigger: TGCAAATCCCAGGAGGCACCACGGTGCTGGTGGAGC...CTGGAGGGAGGGGTGACAGACAAGACAAACTGCGAGAGGAGTACTGTGAGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | CTGGGGAGGACGGGCTGCCAAGCTCTAGAAGAGAAGGCAAGGTCCTCCCTACAGCAGCCGCTCTGTTTGTaGGCCACAAAGGCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGRTGCQALEEKARSSLQQPLCL*ATKASR Trigger: TCTGGATGCCTTTGTGGCCCACAAACAGAGCGGCTG...CTGTAGGGAGGACCTTGCCTTCTCTTCTAGAGCTTGGCAGCCCGTCCTCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCACAGTACTCCTCTCGCAGTTTGTCTTGTCTGTCACCCCTCCCTCCAGGCCACTGCGATGCTCTaGTCCCCATCGCTCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: ASHSTPLAVCLVCHPSLQATAML*SPSLTT Trigger: TGTGGTGAGCGATGGGGACCAGAGCATCGCAGTGGC...CTGGAGGGAGGGGTGACAGACAAGACAAACTGCGAGAGGAGTACTGTGAGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | CAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATGGGGCGTCCCCCGTGTaGGAGCGCAGGTGCACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QSYCGEFQLHIGISLGNHGASPV*ERRCTV Trigger: CACCGTGCACCTGCGCTCGCACACGGGGGACGCCCC...ATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCACAGTACTCCTCTCGCAGTTTGTCTTGTCTGTCACCCCTCCCTCCAGTCCGCAGGGTGGATTTaGTGTCACCCAGGAAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASHSTPLAVCLVCHPSLQSAGWI*CHPGSR Trigger: GCGACTTCCTGGGTGACAGCAAATCCACCCTGCGGA...CTGGAGGGAGGGGTGACAGACAAGACAAACTGCGAGAGGAGTACTGTGAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCACAGTACTCCTCTCGCAGTTTGTCTTGTCTGTCACCCCTCCCTCCAGCTGTGGTACTCACTGTaGTGCCGTTTGTGGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ASHSTPLAVCLVCHPSLQLWYSL*CRLWLR Trigger: CCGCAGCCACAAACGGCAGCACAGTGAGTACCACAG...CTGGAGGGAGGGGTGACAGACAAGACAAACTGCGAGAGGAGTACTGTGAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | ACCGCTCCACTGCTGGAGGCTGGGGAGGACGGGCTGCCAAGCTCTAGAAGAGAAGAATGCACGATCATATaGCGCTTCAAGTCCGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAPLLEAGEDGLPSSRREECTII*RFKSEL Trigger: CAGCTCGGACTTGAAGCGGCATATGATCGTGCATTC...TTCTCTTCTAGAGCTTGGCAGCCCGTCCTCCCCAGCCTCCAGCAGTGGAGCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAGGACGGGCTGCCAAGCTCTAGAAGAGAAGGCAAGGTCCTCCCTACAGTGTTTTGGTGCGTGACTTaGTGGGGAGAGAGATCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GEDGLPSSRREGKVLPTVFWCVT*WGERSR Trigger: CCGTGATCTCTCTCCCCACCAAGTCACGCACCAAAA...CACTGTAGGGAGGACCTTGCCTTCTCTTCTAGAGCTTGGCAGCCCGTCCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR TCA 90 bp | ACCGCTCCACTGCTGGAGGCTGGGGAGGACGGGCTGCCAAGCTCTAGAAGAGAACTTCTGAGGGGAAAGTaGCCAGGTTTGAGTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TAPLLEAGEDGLPSSRRELLRGK*PGLSSC Trigger: ACAAGAACTCAAACCTGGTCACTTTCCCCTCAGAAG...TTCTCTTCTAGAGCTTGGCAGCCCGTCCTCCCCAGCCTCCAGCAGTGGAGCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCACAGTACTCCTCTCGCAGTTTGTCTTGTCTGTCACCCCTCCCTCCAGGTGTGGCAGCGCATGTaGGTCTTCAGCTTGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASHSTPLAVCLVCHPSLQVWQRM*VFSLSF Trigger: GAAGGACAAGCTGAAGACGCACATGCGCTGCCACAC...CTGGAGGGAGGGGTGACAGACAAGACAAACTGCGAGAGGAGTACTGTGAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCACAGTACTCCTCTCGCAGTTTGTCTTGTCTGTCACCCCTCCCTCCAGGAGTGGATGCGCAGGTaGTTGTTAAGGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASHSTPLAVCLVCHPSLQEWMRR*LLRLLL Trigger: CAGCAGCAGCCTTAACAAGCACCTGCGCATCCACTC...CTGGAGGGAGGGGTGACAGACAAGACAAACTGCGAGAGGAGTACTGTGAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | AATCTCAACTCCCAGGCAGCGGCTTTCCCCAGCGGGGTGGACTTGTGCTTAGTGGGCCGTTCTCTCCTTTaGTTCCAAGGACAGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NLNSQAAAFPSGVDLCLVGRSLL*FQGQSD Trigger: GTCACTCTGTCCTTGGAAGCAAAGGAGAGAACGGCC...CACTAAGCACAAGTCCACCCCGCTGGGGAAAGCCGCTGCCTGGGAGTTGAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | AATCTCAACTCCCAGGCAGCGGCTTTCCCCAGCGGGGTGGACTTGTGCTTAGTGCTATGCTGCTTCCGATaGCACCTCAGAGAGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: NLNSQAAAFPSGVDLCLVLCCFR*HLRESS Trigger: GGATGACTCTCTGAGGTGCCATCGGAAGCAGCATAG...CACTAAGCACAAGTCCACCCCGCTGGGGAAAGCCGCTGCCTGGGAGTTGAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCACAGTACTCCTCTCGCAGTTTGTCTTGTCTGTCACCCCTCCCTCCAGAGGCATCCAGATTGCTaGAGTGCTGCTTACAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASHSTPLAVCLVCHPSLQRHPDC*SAAYRG Trigger: GCCTCTGTAAGCAGCACTTCAGCAATCTGGATGCCT...CTGGAGGGAGGGGTGACAGACAAGACAAACTGCGAGAGGAGTACTGTGAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR TCA 90 bp | AATCTCAACTCCCAGGCAGCGGCTTTCCCCAGCGGGGTGGACTTGTGCTTAGTGGAAAGTGACCAGGTTTaGGTTCTTGTTCTCGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLNSQAAAFPSGVDLCLVESDQV*VLVLAP Trigger: TGGGGCGAGAACAAGAACTCAAACCTGGTCACTTTC...CACTAAGCACAAGTCCACCCCGCTGGGGAAAGCCGCTGCCTGGGAGTTGAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | GAAGGAACTGAGCTGTGTTCAGTCATCCCTGTGACCTTGCGTTGGCACCTATGCCTTCTGAGCAGGGGGTaGTGTGGGCTTTTTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: EGTELCSVIPVTLRWHLCLLSRG*CGLFGA Trigger: CGCACCAAAAAGCCCACAGCACCCCCTGCTCAGAAG...GCATAGGTGCCAACGCAAGGTCACAGGGATGACTGAACACAGCTCAGTTCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | CAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATGCTCGGTGCAGTGGATaGGCTCGTGCACGCGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QSYCGEFQLHIGISLGNHARCSG*ARARAA Trigger: CGCTGCGCGTGCACGAGCGCATCCACTGCACCGAGC...ATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTATCCAGCCTGGCCACCTaGCGGCTGCTCTGCCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VFSPTVVNSNSTLESALVSSLAT*RLLCLP Trigger: CGGCAGGCAGAGCAGCCGGCAGGTGGCCAGGCTGGA...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCCACAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTTGGTGCGTGACTTGGTaGGGAGAGAGATCACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRPQGTQGMLVEKELSCVWCVTW*GERSRW Trigger: CCACCGTGATCTCTCTCCCCACCAAGTCACGCACCA...AACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTGTGGCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCACAGTACTCCTCTCGCAGTTTGTCTTGTCTGTCACCCCTCCCTCCAGTTTTGGTGCGTGACTTaGTGGGGAGAGAGATCACGG | + |
|
Preference number: 4 (lower is better) Translates to: ASHSTPLAVCLVCHPSLQFWCVT*WGERSR Trigger: CCGTGATCTCTCTCCCCACCAAGTCACGCACCAAAA...CTGGAGGGAGGGGTGACAGACAAGACAAACTGCGAGAGGAGTACTGTGAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAGGGCGCTCGGTGCAGTaGATGCGCTCGTGCACGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VFSPTVVNSNSTLESALVGRSVQ*MRSCTR Trigger: GCGCGTGCACGAGCGCATCCACTGCACCGAGCGCCC...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| 3UTR CAA 72 bp | GAAGGAACTGAGCTGTGTTCAGTCATCCCTGTGACCTaGCGTTGGCACCTATGCCCTCGGTTAACCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGTELCSVIPVT*RWHLCPRLTAP Trigger: TGGAGCGGTTAACCGAGGGCATAGGTGCCAACGCAAGGTCACAGGGATGACTGAACACAGCTCAGTTCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR TCA 90 bp | AATCTCAACTCCCAGGCAGCGGCTTTCCCCAGCGGGGTGGACTTGTGCTTAGTGGACGAACTCTGGAGCTaGAACTGTGATAGTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLNSQAAAFPSGVDLCLVDELWS*NCDSLS Trigger: ACTCAGACTATCACAGTTTCAGCTCCAGAGTTCGTC...CACTAAGCACAAGTCCACCCCGCTGGGGAAAGCCGCTGCCTGGGAGTTGAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR TCA 90 bp | GGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTCAGTCATCCCTGTGACCTTGGCTTGTCCTTCCGGCTaGAGCACTTCCCGCACACCT | + |
|
Preference number: 4 (lower is better) Translates to: GNACREGTELCSVIPVTLACPSG*STSRTP Trigger: AGGTGTGCGGGAAGTGCTTCAGCCGGAAGGACAAGC...CAAGGTCACAGGGATGACTGAACACAGCTCAGTTCCTTCTCTACAAGCATTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | CAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATCCACAAACTGGACCGTaGTGGGGGCTGTCACCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QSYCGEFQLHIGISLGNHPQTGP*WGLSPA Trigger: CGCCGGTGACAGCCCCCAGCACGGTCCAGTTTGTGG...ATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | CAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATGGGTGCTCCGACTGGTaGAGGCGACTGTGCTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QSYCGEFQLHIGISLGNHGCSDW*RRLCFR Trigger: GCGGAAGCACAGTCGCCTGCACCAGTCGGAGCACCC...ATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCACAGTACTCCTCTCGCAGTTTGTCTTGTCTGTCACCCCTCCCTCCAGTGTGCTTGCTCAGGTTaGTGGGTTGCTTGGTATCGA | + |
|
Preference number: 4 (lower is better) Translates to: ASHSTPLAVCLVCHPSLQCACSG*WVAWYR Trigger: TCGATACCAAGCAACCCAGCAACCTGAGCAAGCACA...CTGGAGGGAGGGGTGACAGACAAGACAAACTGCGAGAGGAGTACTGTGAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCACAGTACTCCTCTCGCAGTTTGTCTTGTCTGTCACCCCTCCCTCCAGTGCTTGGGCAGTTCCTaGTGGGTAGAGAAGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASHSTPLAVCLVCHPSLQCLGSS*WVEKIE Trigger: CTCTATCTTCTCTACCCAGCAGGAACTGCCCAAGCA...CTGGAGGGAGGGGTGACAGACAAGACAAACTGCGAGAGGAGTACTGTGAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | CAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATCAAACTGGACCGTGCTaGGGGCTGTCACCGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSYCGEFQLHIGISLGNHQTGPC*GLSPAW Trigger: CCACGCCGGTGACAGCCCCCAGCACGGTCCAGTTTG...ATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | CAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATCTCCCCTCGCTGAACTaGGGCACCTGGCTGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSYCGEFQLHIGISLGNHLPSLN*GTWLDW Trigger: CCAGTCCAGCCAGGTGCCCCAGTTCAGCGAGGGGAG...ATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR TCA 90 bp | AGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTCAGCCGAGTCTCTTCTaGGCAGGGGGTGCTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPTVVNSNSTLESALVTIQPSLF*AGGAVG Trigger: GCCCACAGCACCCCCTGCTCAGAAGAGACTCGGCTG...AATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTCAGTCATCGACAGATCTGGCACTTaGAGGGTCGCTCGTCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TGHSGNACREGTELCSVIDRSGT*RVARPS Trigger: ACTCGGACGAGCGACCCTTCAAGTGCCAGATCTGTC...GATGACTGAACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR TCA 90 bp | GTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTAAGACACAAGCGGCCCCTGCCGTCTaGTCATGGGTGGTCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVNSNSTLESALVTIKTQAAPAV*SWVVSR Trigger: CCTGCTGACCACCCATGATCAGACGGCAGGGGCCGC...TTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | CAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTCAGTCATCCGTGTGGCAGCGCATGTaGGTCTTCAGCTTGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGTQGMLVEKELSCVQSSVWQRM*VFSLSF Trigger: GAAGGACAAGCTGAAGACGCACATGCGCTGCCACAC...GGATGACTGAACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCACAGTACTCCTCTCGCAGTTTGTCTTGTCTGTCACCCCTCCCTCCAGTGGAACTTCTTCATGTaGTTGCTCAGGTTGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASHSTPLAVCLVCHPSLQWNFFM*LLRLLG Trigger: ACCCAGCAACCTGAGCAAGCACATGAAGAAGTTCCA...CTGGAGGGAGGGGTGACAGACAAGACAAACTGCGAGAGGAGTACTGTGAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAGCTGCCGTTTGTGGCTaGGGAGCGAGTCCTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFSPTVVNSNSTLESALVAAVCG*GASPPA Trigger: TGCGGGAGGACTCGCTCCGCAGCCACAAACGGCAGC...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | ATAAAATACAATTATTTATACGGGACCAGGAGCCTCTCACAGTACTCCTCTCGCGAGCAGGGCGGGGTGTaGCGCCCCGTGGATGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: IKYNYLYGTRSLSQYSSREQGGV*RPVDDG Trigger: TCCATCATCCACGGGGCGGCACACCCCGCCCTGCTC...GCGAGAGGAGTACTGTGAGAGGCTCCTGGTCCCGTATAAATAATTGTATTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCACAGTACTCCTCTCGCAGTTTGTCTTGTCTGTCACCCCTCCCTCCAGTTGAGCATGTCGGCGTaGAACTTCTTCATGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASHSTPLAVCLVCHPSLQLSMSA*NFFMCL Trigger: CAAGCACATGAAGAAGTTCCACGCCGACATGCTCAA...CTGGAGGGAGGGGTGACAGACAAGACAAACTGCGAGAGGAGTACTGTGAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | CAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTCTTGGCATCCAGCCTaGCCACCTGCCGGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSYCGEFQLHIGISLGNHSWHPA*PPAGCS Trigger: AGAGCAGCCGGCAGGTGGCCAGGCTGGATGCCAAGA...ATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | AGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTACTGGGGCACCTGGCTaGACTGGAGGGGGACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPTVVNSNSTLESALVTITGAPG*TGGGPG Trigger: TCCAGGTCCCCCTCCAGTCCAGCCAGGTGCCCCAGT...AATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | CTTGCGTTGGCACCTATGCCCTCGGTTAACCGCTCCACTGCTGGAGGCTGGGGATTTGAAATGACAACCTaGATAGCGGCAGTTAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LALAPMPSVNRSTAGGWGFEMTT*IAAVKG Trigger: ACCTTTAACTGCCGCTATCCAGGTTGTCATTTCAAA...TCCCCAGCCTCCAGCAGTGGAGCGGTTAACCGAGGGCATAGGTGCCAACGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCCACAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTGGTTGTCCTTCCGGCTaGAGCACTTATCACAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LRPQGTQGMLVEKELSCVGCPSG*STYHRT Trigger: AGTTCTGTGATAAGTGCTTCAGCCGGAAGGACAACC...AACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTGTGGCCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTCAGTCATCCTGTGGGCTTTTTGGTaGGTGACTTGGTGGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGHSGNACREGTELCSVILWAFW*VTWWGE Trigger: CTCTCCCCACCAAGTCACGCACCAAAAAGCCCACAG...GATGACTGAACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTTGCCGTGGTGGCCACTaGGATGCTCTGGTCCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SPTVVNSNSTLESALVTICRGGH*DALVPI Trigger: GATGGGGACCAGAGCATCGCAGTGGCCACCACGGCA...AATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | ACAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTCAGTCATCGTGCTGTGGGCTTTTTaGTGCGTGACTTGGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGHSGNACREGTELCSVIVLWAF*CVTWWG Trigger: TCCCCACCAAGTCACGCACCAAAAAGCCCACAGCAC...GATGACTGAACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTACTGTGCTGCCGTTTGTaGCTGCGGAGCGAGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFSPTVVNSNSTLESALVLCCRL*LRSESS Trigger: GGAGGACTCGCTCCGCAGCCACAAACGGCAGCACAG...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | ATAAAATACAATTATTTATACGGGACCAGGAGCCTCTCACAGTACTCCTCTCGCCTGAACTGGGGCACCTaGCTGGACTGGAGGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: IKYNYLYGTRSLSQYSSRLNWGT*LDWRGT Trigger: GGTCCCCCTCCAGTCCAGCCAGGTGCCCCAGTTCAG...GCGAGAGGAGTACTGTGAGAGGCTCCTGGTCCCGTATAAATAATTGTATTTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | AGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTCCCTGGGATCTCCTCTaGGGTCTGGGCTACCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPTVVNSNSTLESALVTIPWDLL*GLGYQG Trigger: ACCCTGGTAGCCCAGACCCCAGAGGAGATCCCAGGG...AATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTCAGTCATCAGGCATCCAGATTGCTaGAGTGCTGCTTACAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGHSGNACREGTELCSVIRHPDC*SAAYRG Trigger: GCCTCTGTAAGCAGCACTTCAGCAATCTGGATGCCT...GATGACTGAACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR TCA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAGCTTGTCCTTCCGGCTaGAGCACTTCCCGCACACCT | + |
|
Preference number: 4 (lower is better) Translates to: VFSPTVVNSNSTLESALVACPSG*STSRTP Trigger: AGGTGTGCGGGAAGTGCTTCAGCCGGAAGGACAAGC...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR TCA 90 bp | GTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTAAGACACAAGGACACCCGGAGGACTaGGGAGGGGCAATGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: VVNSNSTLESALVTIKTQGHPED*GGAMRL Trigger: CAGTCTCATTGCCCCTCCTCAGTCCTCCGGGTGTCC...TTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAGATGTGGATGTCCGGTaGCAGCTCCACCAGCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: VFSPTVVNSNSTLESALVDVDVR*QLHQHR Trigger: ACGGTGCTGGTGGAGCTGGCACCGGACATCCACATC...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | CAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATCTTCTGAGCAGGGGGTaGTGTGGGCTTTTTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QSYCGEFQLHIGISLGNHLLSRG*CGLFGA Trigger: CGCACCAAAAAGCCCACAGCACCCCCTGCTCAGAAG...ATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | ATAAAATACAATTATTTATACGGGACCAGGAGCCTCTCACAGTACTCCTCTCGCCGCGCAGCGCAGCCTTaGTGGAACAGGAGTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IKYNYLYGTRSLSQYSSRRAAQP*WNRSSC Trigger: GCAGCTACTCCTGTTCCAGCAAGGCTGCGCTGCGCG...GCGAGAGGAGTACTGTGAGAGGCTCCTGGTCCCGTATAAATAATTGTATTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTCAGTCATCGGTTCGCCTTCATGGTaGAACGGACGTCACAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TGHSGNACREGTELCSVIGSPSW*NGRHRT Trigger: AGTTCTGTGACGTCCGTTGCACCATGAAGGCGAACC...GATGACTGAACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | AGGCCACAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTCAGAGACACTTGAAGGTGTaGTTGATACGGATGTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RPQGTQGMLVEKELSCVQRHLKV*LIRMWD Trigger: GTCCCACATCCGTATCAAGCACACCTTCAAGTGTCT...CTGAACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTGTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR GCA 90 bp | AGGCCACAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTCAGTTGGCGCCTTCTCTGTaGACCTTATCGATGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RPQGTQGMLVEKELSCVQLAPSL*TLSMCL Trigger: CAAACACATCGATAAGGTGCACAGAGAAGGCGCCAA...CTGAACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTGTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTATCCTCTGCCACAAACTaGACCGTGCTGGGGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFSPTVVNSNSTLESALVSSATN*TVLGAV Trigger: GACAGCCCCCAGCACGGTCCAGTTTGTGGCAGAGGA...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | ACAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTCAGTCATCCTTGAACTGGCAACCTaGATAGCAGCAGCCGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGHSGNACREGTELCSVILELAT*IAAAES Trigger: AGACTCGGCTGCTGCTATCCAGGTTGCCAGTTCAAG...GATGACTGAACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CCA 90 bp | ATAAAATACAATTATTTATACGGGACCAGGAGCCTCTCACAGTACTCCTCTCGCGGCTTGACGCCCGTGTaGCAGCGCATGTGCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IKYNYLYGTRSLSQYSSRGLTPV*QRMCVF Trigger: GAAGACGCACATGCGCTGCCACACGGGCGTCAAGCC...GCGAGAGGAGTACTGTGAGAGGCTCCTGGTCCCGTATAAATAATTGTATTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | ATAAAATACAATTATTTATACGGGACCAGGAGCCTCTCACAGTACTCCTCTCGCGGCACCTGGCTGGACTaGAGGGGGACCTGGATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IKYNYLYGTRSLSQYSSRGTWLD*RGTWIC Trigger: GCAAATCCAGGTCCCCCTCCAGTCCAGCCAGGTGCC...GCGAGAGGAGTACTGTGAGAGGCTCCTGGTCCCGTATAAATAATTGTATTTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAGGTCAGCAGGACAGTTaGCTGACTCAGGGCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VFSPTVVNSNSTLESALVGQQDS*LTQGTC Trigger: GCAGGTGCCCTGAGTCAGCCAACTGTCCTGCTGACC...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | GTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTAAGACACAATCCCAACCGGGGTGGTaGGGATCAGAGCCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VVNSNSTLESALVTIKTQSQPGW*GSEPAA Trigger: TGCAGCAGGCTCTGATCCCCACCACCCCGGTTGGGA...TTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | CAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATAGTGGAACGTCTTCTTaGCATCCAGCCTGGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: QSYCGEFQLHIGISLGNHSGTSS*HPAWPP Trigger: AGGTGGCCAGGCTGGATGCCAAGAAGACGTTCCACT...ATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | ACAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTCAGTCATCTGCTTGATACGGATGTaGGACTTGAGGTTCGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGHSGNACREGTELCSVICLIRM*DLRFAF Trigger: GAAGGCGAACCTCAAGTCCCACATCCGTATCAAGCA...GATGACTGAACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR TCA 90 bp | GTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTAAGACACAAGACAGATCTGGCACTTaGAGGGTCGCTCGTCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VVNSNSTLESALVTIKTQDRSGT*RVARPS Trigger: ACTCGGACGAGCGACCCTTCAAGTGCCAGATCTGTC...TTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | AGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTCTGTGGGCTTTTTGGTaGGTGACTTGGTGGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPTVVNSNSTLESALVTILWAFW*VTWWGE Trigger: CTCTCCCCACCAAGTCACGCACCAAAAAGCCCACAG...AATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTATGGAACAGGAGTAGCTaGACTCGGGACACTTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VFSPTVVNSNSTLESALVWNRSS*TRDTSP Trigger: CGGAGAAGTGTCCCGAGTGCAGCTACTCCTGTTCCA...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | ATAAAATACAATTATTTATACGGGACCAGGAGCCTCTCACAGTACTCCTCTCGCTGGTACTCACTGTGCTaGCGTTTGTGGCTGCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKYNYLYGTRSLSQYSSRWYSLC*RLWLRS Trigger: GCTCCGCAGCCACAAACGGCAGCACAGTGAGTACCA...GCGAGAGGAGTACTGTGAGAGGCTCCTGGTCCCGTATAAATAATTGTATTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTACAGCCGCTCTGTTTGTaGGCCACAAAGGCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFSPTVVNSNSTLESALVQPLCL*ATKASR Trigger: TCTGGATGCCTTTGTGGCCCACAAACAGAGCGGCTG...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | GTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTAAGACACAATGGTGCGTGACTTGGTaGGGAGAGAGATCACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVNSNSTLESALVTIKTQWCVTW*GERSRW Trigger: CCACCGTGATCTCTCTCCCCACCAAGTCACGCACCA...TTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | GTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTAAGACACAAGAGCAGGGGGTGCTGTaGGCTTTTTGGTGCGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: VVNSNSTLESALVTIKTQEQGVL*AFWCVT Trigger: AGTCACGCACCAAAAAGCCCACAGCACCCCCTGCTC...TTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTATCCAGATTGCTGAAGTaGTGCTTACAGAGGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VFSPTVVNSNSTLESALVSRLLK*CLQRPQ Trigger: CTGCGGCCTCTGTAAGCAGCACTTCAGCAATCTGGA...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | GTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTAAGACACAAAGGCTCTGTCTCCTCTaGCACAAACTGGACCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVNSNSTLESALVTIKTQRLCLL*HKLDRA Trigger: AGCACGGTCCAGTTTGTGGCAGAGGAGACAGAGCCT...TTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | AGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTTGTCAGTGCTCTCCGTaGGCAGGTAAGTTTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPTVVNSNSTLESALVTICQCSP*AGKFGS Trigger: GCTACCAAACTTACCTGCCCACGGAGAGCACTGACA...AATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | ATAAAATACAATTATTTATACGGGACCAGGAGCCTCTCACAGTACTCCTCTCGCGTGCTGTGGGCTTTTTaGTGCGTGACTTGGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IKYNYLYGTRSLSQYSSRVLWAF*CVTWWG Trigger: TCCCCACCAAGTCACGCACCAAAAAGCCCACAGCAC...GCGAGAGGAGTACTGTGAGAGGCTCCTGGTCCCGTATAAATAATTGTATTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | AGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTCTTGAACTGGCAACCTaGATAGCAGCAGCCGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPTVVNSNSTLESALVTILELAT*IAAAES Trigger: AGACTCGGCTGCTGCTATCCAGGTTGCCAGTTCAAG...AATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | GTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTAAGACACAATGTGCTTCCGCAGGGTaGATTTGCTGTCACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVNSNSTLESALVTIKTQCASAG*ICCHPG Trigger: TCCTGGGTGACAGCAAATCCACCCTGCGGAAGCACA...TTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | ATAAAATACAATTATTTATACGGGACCAGGAGCCTCTCACAGTACTCCTCTCGCCCGTCTGATCATGGGTaGTCAGCAGGACAGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKYNYLYGTRSLSQYSSRPSDHG*SAGQLA Trigger: AGCCAACTGTCCTGCTGACCACCCATGATCAGACGG...GCGAGAGGAGTACTGTGAGAGGCTCCTGGTCCCGTATAAATAATTGTATTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR TCA 90 bp | AGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTTCTGAGTCTCTGAACTaGTGGTCGTTGTGGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPTVVNSNSTLESALVTISESLN*WSLWWS Trigger: AGACCACCACAACGACCATCAGTTCAGAGACTCAGA...AATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | AGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTCCCAGGAAGTCGCAGTaGGGACACTTGAAGTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: SPTVVNSNSTLESALVTIPRKSQ*GHLKLF Trigger: GAATAACTTCAAGTGTCCGCACTGCGACTTCCTGGG...AATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | GTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTAAGACACAAGCTTGCTCAGGTTGCTaGGTTGCTTGGTATCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVNSNSTLESALVTIKTQACSGC*VAWYRS Trigger: GCTTCGATACCAAGCAACCCAGCAACCTGAGCAAGC...TTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTATCACAGATGTCGCAGTaGAACGTCTTCTTGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VFSPTVVNSNSTLESALVSQMSQ*NVFLAS Trigger: GGATGCCAAGAAGACGTTCCACTGCGACATCTGTGA...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CCA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTATTGGGCAGTTCCTGCTaGGTAGAGAAGATAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VFSPTVVNSNSTLESALVLGSSC*VEKIEG Trigger: ACCCTCTATCTTCTCTACCCAGCAGGAACTGCCCAA...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR TCA 90 bp | GTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTAAGACACAAGACGAACTCTGGAGCTaGAACTGTGATAGTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VVNSNSTLESALVTIKTQDELWS*NCDSLS Trigger: ACTCAGACTATCACAGTTTCAGCTCCAGAGTTCGTC...TTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR TCA 90 bp | GTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTAAGACACAAGAAACTGTGATAGTCTaGGTCTCTGAACTGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVNSNSTLESALVTIKTQETVIV*VSELMV Trigger: GACCATCAGTTCAGAGACTCAGACTATCACAGTTTC...TTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR GCA 90 bp | ATAAAATACAATTATTTATACGGGACCAGGAGCCTCTCACAGTACTCCTCTCGCAAGTTATTCCCACTGTaGTTGATGCGGATGTGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: IKYNYLYGTRSLSQYSSRKLFPL*LMRMCD Trigger: ATCGCACATCCGCATCAAGCACAGTGGGAATAACTT...GCGAGAGGAGTACTGTGAGAGGCTCCTGGTCCCGTATAAATAATTGTATTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| 3UTR CAA 72 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATaGGAATCAGCCTTGGTAACCATTAAGACACAATCA | + |
|
Preference number: 4 (lower is better) Translates to: VFSPTVVNSNST*ESALVTIKTQS Trigger: TGATTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CCA 90 bp | CAGGGCGGCCCCTGCCGTCTGATCATGGGTGGTCAGCAGGACAGTTaGCTGACTCAGGGCACCTGCTTCGCCGGGACACCCGGAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: QGGPCRLIMGGQQDS*LTQGTCFAGTPGGL Trigger: CAGTCCTCCGGGTGTCCCGGCGAAGCAGGTGCCCTGAGTCAGCCAACTGTCCTGCTGACCACCCATGATCAGACGGCAGGGGCCGCCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS GCA 90 bp | CAGATGTCGCAGTGGAACGTCTTCTTGGCATCCAGCCTGGCCACCTaGCGGCTGCTCTGCCTGCCGCTCTCCTTCTTCTCCGGAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QMSQWNVFLASSLAT*RLLCLPLSFFSGAS Trigger: CGAGGCTCCGGAGAAGAAGGAGAGCGGCAGGCAGAGCAGCCGGCAGGTGGCCAGGCTGGATGCCAAGAAGACGTTCCACTGCGACATCTG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CCA 90 bp | GTTGTGGTGGTCTGGGTGGCAGGCTCTGTCTCCTCTGCCACAAACTaGACCGTGCTGGGGGCTGTCACCGGCGTGGTAGTCAGCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VVVVWVAGSVSSATN*TVLGAVTGVVVSWQ Trigger: CTGCCAGCTGACTACCACGCCGGTGACAGCCCCCAGCACGGTCCAGTTTGTGGCAGAGGAGACAGAGCCTGCCACCCAGACCACCACAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS-3UTR CAA 90 bp | ACCGCTCCACTGCTGGAGGCTGGGGAGGACGGGCTGCCAAGCTCTAGAAGAGAAACGGTGGCTGTCTGGTaGTCAGTGCTCTCCGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TAPLLEAGEDGLPSSRRETVAVW*SVLSVG Trigger: GCCCACGGAGAGCACTGACAACCAGACAGCCACCGT...TTCTCTTCTAGAGCTTGGCAGCCCGTCCTCCCCAGCCTCCAGCAGTGGAGCGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS GCA 90 bp | ACTGATGGTCGTTGTGGTGGTCTGGGTGGCAGGCTCTGTCTCCTCTaGCACAAACTGGACCGTGCTGGGGGCTGTCACCGGCGTGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: TDGRCGGLGGRLCLL*HKLDRAGGCHRRGS Trigger: ACTACCACGCCGGTGACAGCCCCCAGCACGGTCCAGTTTGTGGCAGAGGAGACAGAGCCTGCCACCCAGACCACCACAACGACCATCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS GCA 90 bp | CTGATCATGGGTGGTCAGCAGGACAGTTGGCTGACTCAGGGCACCTaGTTCGCCGGGACACCCGGAGGACTGAGGAGGGGCAATGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: LIMGGQQDSWLTQGT*FAGTPGGLRRGNET Trigger: AGTCTCATTGCCCCTCCTCAGTCCTCCGGGTGTCCCGGCGAAGCAGGTGCCCTGAGTCAGCCAACTGTCCTGCTGACCACCCATGATCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS GCA 90 bp | GCCGTTCTCTCCTTTGCTTCCAAGGACAGAGTGACTGCAGGGGCCTaGTGGGCATCGCTTTCTTCAGCAGGGAGGCCCGCCGGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVLSFASKDRVTAGA*WASLSSAGRPAGFW Trigger: CCAGAAACCGGCGGGCCTCCCTGCTGAAGAAAGCGATGCCCAGCAGGCCCCTGCAGTCACTCTGTCCTTGGAAGCAAAGGAGAGAACGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109162.9 ENSMUST00000124599.2 |
||
| CDS GCA 90 bp | TCCAAGGGTGGCCGTTCTCTCCTTTGCTTCCAAGGACAGAGTGACTaGAGGGGCCTGCTGGGCATCGCTTTCTTCAGCAGGGAGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SKGGRSLLCFQGQSD*RGLLGIAFFSREAR Trigger: GCGGGCCTCCCTGCTGAAGAAAGCGATGCCCAGCAGGCCCCTGCAGTCACTCTGTCCTTGGAAGCAAAGGAGAGAACGGCCACCCTTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109162.9 ENSMUST00000124599.2 |
||
| CDS-3UTR CAA 90 bp | AACTCCCAGGCAGCGGCTTTCCCCAGCGGGGTGGACTTGTGCTTAGTGGAGCCCTGGATGCGCAGGTGCTaGTTAAGGCTGCTGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NSQAAAFPSGVDLCLVEPWMRRC*LRLLLS Trigger: GGACAGCAGCAGCCTTAACAAGCACCTGCGCATCCA...GGGCTCCACTAAGCACAAGTCCACCCCGCTGGGGAAAGCCGCTGCCTGGGAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS CCA 90 bp | AAGGCATCCAGATTGCTGAAGTGCTGCTTACAGAGGCCGCAGATGTaGATGTCCGGTGCCAGCTCCACCAGCACCGTGGTGCCTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KASRLLKCCLQRPQM*MSGASSTSTVVPPG Trigger: CCCAGGAGGCACCACGGTGCTGGTGGAGCTGGCACCGGACATCCACATCTGCGGCCTCTGTAAGCAGCACTTCAGCAATCTGGATGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS CCA 90 bp | ACAAACTGGACCGTGCTGGGGGCTGTCACCGGCGTGGTAGTCAGCTaGCAGCCGCTCTGTTTGTGGGCCACAAAGGCATCCAGATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TNWTVLGAVTGVVVS*QPLCLWATKASRLL Trigger: CAGCAATCTGGATGCCTTTGTGGCCCACAAACAGAGCGGCTGCCAGCTGACTACCACGCCGGTGACAGCCCCCAGCACGGTCCAGTTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS CCA 90 bp | CCTTCCAAGTCCGAGCACGTGATGCCCGAACTGGCAATGAATGTCTaGTTTCCCGTGCCTTCCTGGGTCCCAACCGGGGTGGTGGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: PSKSEHVMPELAMNV*FPVPSWVPTGVVGI Trigger: GATCCCCACCACCCCGGTTGGGACCCAGGAAGGCACGGGAAACCAGACATTCATTGCCAGTTCGGGCATCACGTGCTCGGACTTGGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | GGGGAGGACGGGCTGCCAAGCTCTAGAAGAGAAGGCAAGGTCCTCCCTACAGTGGGTGCTGTGGGCTTTTaGGTGCGTGACTTGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GEDGLPSSRREGKVLPTVGAVGF*VRDLVG Trigger: CCCCACCAAGTCACGCACCAAAAAGCCCACAGCACC...CACTGTAGGGAGGACCTTGCCTTCTCTTCTAGAGCTTGGCAGCCCGTCCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CAA 90 bp | CTTGCGTTGGCACCTATGCCCTCGGTTAACCGCTCCACTGCTGGAGGCTGGGGATCGCACAGGTGGCACTaGTGTGGCTTCACACTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LALAPMPSVNRSTAGGWGSHRWH*CGFTLV Trigger: CACGAGTGTGAAGCCACACAAGTGCCACCTGTGCGA...TCCCCAGCCTCCAGCAGTGGAGCGGTTAACCGAGGGCATAGGTGCCAACGCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS GCA 90 bp | GGCCGCAGATGTGGATGTCCGGTGCCAGCTCCACCAGCACCGTGGTaGCTCCTGGGATTTGCATCGATCCAGAAAAGGTGTCTCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRRCGCPVPAPPAPW*LLGFASIQKRCLLP Trigger: TGGAAGGAGACACCTTTTCTGGATCGATGCAAATCCCAGGAGGCACCACGGTGCTGGTGGAGCTGGCACCGGACATCCACATCTGCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS GCA 90 bp | GTAAGTCTGCTTGGGCAGTTCCTGCTGGGTAGAGAAGATAGAGGGTaGCGTGGTGGCCACTGCGATGCTCTGGTCCCCATCGCTCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSLLGQFLLGREDRG*RGGHCDALVPIAHH Trigger: GTGGTGAGCGATGGGGACCAGAGCATCGCAGTGGCCACCACGGCACCCTCTATCTTCTCTACCCAGCAGGAACTGCCCAAGCAGACTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CCA 90 bp | GATGTGGATGTCCGGTGCCAGCTCCACCAGCACCGTGGTGCCTCCTaGGATTTGCATCGATCCAGAAAAGGTGTCTCCTTCCACGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: DVDVRCQLHQHRGAS*DLHRSRKGVSFHAR Trigger: GCGAGCGTGGAAGGAGACACCTTTTCTGGATCGATGCAAATCCCAGGAGGCACCACGGTGCTGGTGGAGCTGGCACCGGACATCCACATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS CCA 90 bp | GGGGCTGTCACCGGCGTGGTAGTCAGCTGGCAGCCGCTCTGTTTGTaGGCCACAAAGGCATCCAGATTGCTGAAGTGCTGCTTACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GAVTGVVVSWQPLCL*ATKASRLLKCCLQR Trigger: CCTCTGTAAGCAGCACTTCAGCAATCTGGATGCCTTTGTGGCCCACAAACAGAGCGGCTGCCAGCTGACTACCACGCCGGTGACAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS CCA 90 bp | GTTCTCTCCTTTGCTTCCAAGGACAGAGTGACTGCAGGGGCCTGCTaGGCATCGCTTTCTTCAGCAGGGAGGCCCGCCGGTTTCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: VLSFASKDRVTAGAC*ASLSSAGRPAGFWT Trigger: TGTCCAGAAACCGGCGGGCCTCCCTGCTGAAGAAAGCGATGCCCAGCAGGCCCCTGCAGTCACTCTGTCCTTGGAAGCAAAGGAGAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109162.9 ENSMUST00000124599.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGAGGACGGGCTGCCAAGCTCTAGAAGAGAAGGCAAGGTCCTCCCTACAGCTGCAGAAGTCACATTaGAAGGGCCGGTCCGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGRTGCQALEEKARSSLQLQKSH*KGRSVQ Trigger: CTGCACGGACCGGCCCTTCAAATGTGACTTCTGCAG...CTGTAGGGAGGACCTTGCCTTCTCTTCTAGAGCTTGGCAGCCCGTCCTCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS TCA 90 bp | GCTGGCAGCCGCTCTGTTTGTGGGCCACAAAGGCATCCAGATTGCTaGAGTGCTGCTTACAGAGGCCGCAGATGTGGATGTCCGGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGSRSVCGPQRHPDC*SAAYRGRRCGCPVP Trigger: TGGCACCGGACATCCACATCTGCGGCCTCTGTAAGCAGCACTTCAGCAATCTGGATGCCTTTGTGGCCCACAAACAGAGCGGCTGCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS TCA 90 bp | GGCTGCTCTGCCTGCCGCTCTCCTTCTTCTCCGGAGCCTCGTTCTTaGGCATGTCGGCGTGGAACTTCTTCATGTGCTTGCTCAGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GCSACRSPSSPEPRS*ACRRGTSSCACSGC Trigger: GCAACCTGAGCAAGCACATGAAGAAGTTCCACGCCGACATGCTCAAGAACGAGGCTCCGGAGAAGAAGGAGAGCGGCAGGCAGAGCAGCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS TCA 90 bp | CTCTGGTCCCCATCGCTCACCACAGTCACTTCCGTCGTTCCCTCCTaGATCAGAGCGTTAAGGCCTTCCAAGTCCGAGCACGTGATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LWSPSLTTVTSVVPS*IRALRPSKSEHVMP Trigger: GGGCATCACGTGCTCGGACTTGGAAGGCCTTAACGCTCTGATTCAGGAGGGAACGACGGAAGTGACTGTGGTGAGCGATGGGGACCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS TCA 90 bp | TTTCTCCAAGGGTGGCCGTTCTCTCCTTTGCTTCCAAGGACAGAGTaGCTGCAGGGGCCTGCTGGGCATCGCTTTCTTCAGCAGGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLQGWPFSPLLPRTE*LQGPAGHRFLQQGG Trigger: GCCTCCCTGCTGAAGAAAGCGATGCCCAGCAGGCCCCTGCAGTCACTCTGTCCTTGGAAGCAAAGGAGAGAACGGCCACCCTTGGAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109162.9 ENSMUST00000124599.2 |
||
| CDS GCA 90 bp | CCGCTCTGTTTGTGGGCCACAAAGGCATCCAGATTGCTGAAGTGCTaGTTACAGAGGCCGCAGATGTGGATGTCCGGTGCCAGCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PLCLWATKASRLLKC*LQRPQMWMSGASST Trigger: GGTGGAGCTGGCACCGGACATCCACATCTGCGGCCTCTGTAAGCAGCACTTCAGCAATCTGGATGCCTTTGTGGCCCACAAACAGAGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS GCA 90 bp | CAGCCGCTCTGTTTGTGGGCCACAAAGGCATCCAGATTGCTGAAGTaGTGCTTACAGAGGCCGCAGATGTGGATGTCCGGTGCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QPLCLWATKASRLLK*CLQRPQMWMSGASS Trigger: GGAGCTGGCACCGGACATCCACATCTGCGGCCTCTGTAAGCAGCACTTCAGCAATCTGGATGCCTTTGTGGCCCACAAACAGAGCGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS GCA 90 bp | GCGGCAGTTAAAGGTCCTTTCTCCAAGGGTGGCCGTTCTCTCCTTTaGTTCCAAGGACAGAGTGACTGCAGGGGCCTGCTGGGCATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAVKGPFSKGGRSLL*FQGQSDCRGLLGIA Trigger: AGCGATGCCCAGCAGGCCCCTGCAGTCACTCTGTCCTTGGAAGCAAAGGAGAGAACGGCCACCCTTGGAGAAAGGACCTTTAACTGCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109162.9 ENSMUST00000124599.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGAGGACGGGCTGCCAAGCTCTAGAAGAGAAGGCAAGGTCCTCCCTACAGATGTGCGTCTTCAGCTaGTCCTTCCGGCTGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGRTGCQALEEKARSSLQMCVFS*SFRLKH Trigger: GTGCTTCAGCCGGAAGGACAAGCTGAAGACGCACAT...CTGTAGGGAGGACCTTGCCTTCTCTTCTAGAGCTTGGCAGCCCGTCCTCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CAA 90 bp | GGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTCAGTCATCCCTGTGACCTTGTCCCCGGGACCATCCTaGCCCGGAGGGGCCCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GNACREGTELCSVIPVTLSPGPS*PGGALF Trigger: GAACAGGGCCCCTCCGGGCAAGGATGGTCCCGGGGA...CAAGGTCACAGGGATGACTGAACACAGCTCAGTTCCTTCTCTACAAGCATTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS CCA 90 bp | GTCACGTCCGAGTTCTTACTGTGGTACTCACTGTGCTGCCGTTTGTaGCTGCGGAGCGAGTCCTCCCGCATAAACGAGGCGTCACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VTSEFLLWYSLCCRL*LRSESSRINEASQM Trigger: CATCTGTGACGCCTCGTTTATGCGGGAGGACTCGCTCCGCAGCCACAAACGGCAGCACAGTGAGTACCACAGTAAGAACTCGGACGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS TCA 90 bp | TGCTCTACGGTGAGGGGCGCAGCCGGCTGCTTGCTGGGTTCAAGGTaGAGCTGTACTACAGTCACGTCCGAGTTCTTACTGTGGTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSTVRGAAGCLLGSR*SCTTVTSEFLLWYS Trigger: TGAGTACCACAGTAAGAACTCGGACGTGACTGTAGTACAGCTTCACCTTGAACCCAGCAAGCAGCCGGCTGCGCCCCTCACCGTAGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS GCA 90 bp | TGTACTACAGTCACGTCCGAGTTCTTACTGTGGTACTCACTGTGCTaGCGTTTGTGGCTGCGGAGCGAGTCCTCCCGCATAAACGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CTTVTSEFLLWYSLC*RLWLRSESSRINEA Trigger: CGCCTCGTTTATGCGGGAGGACTCGCTCCGCAGCCACAAACGGCAGCACAGTGAGTACCACAGTAAGAACTCGGACGTGACTGTAGTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | GAAGGAACTGAGCTGTGTTCAGTCATCCCTGTGACCTTGCGTTGGCACCTATGCTGGCAGCCGCTCTGTTaGTGGGCCACAAAGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: EGTELCSVIPVTLRWHLCWQPLC*WATKAS Trigger: GGATGCCTTTGTGGCCCACAAACAGAGCGGCTGCCA...GCATAGGTGCCAACGCAAGGTCACAGGGATGACTGAACACAGCTCAGTTCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CAA 90 bp | GAAGGAACTGAGCTGTGTTCAGTCATCCCTGTGACCTTGCGTTGGCACCTATGCGGACAGATCTGGCACTaGAAGGGTCGCTCGTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: EGTELCSVIPVTLRWHLCGQIWH*KGRSSE Trigger: CTCGGACGAGCGACCCTTCAAGTGCCAGATCTGTCC...GCATAGGTGCCAACGCAAGGTCACAGGGATGACTGAACACAGCTCAGTTCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS GCA 90 bp | AGCTGTACTACAGTCACGTCCGAGTTCTTACTGTGGTACTCACTGTaGTGCCGTTTGTGGCTGCGGAGCGAGTCCTCCCGCATAAACGAG | + |
|
Preference number: 5 (lower is better) Translates to: SCTTVTSEFLLWYSL*CRLWLRSESSRINE Trigger: CTCGTTTATGCGGGAGGACTCGCTCCGCAGCCACAAACGGCAGCACAGTGAGTACCACAGTAAGAACTCGGACGTGACTGTAGTACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CCA 90 bp | CCGCTCTCCTTCTTCTCCGGAGCCTCGTTCTTGAGCATGTCGGCGTaGAACTTCTTCATGTGCTTGCTCAGGTTGCTGGGTTGCTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PLSFFSGASFLSMSA*NFFMCLLRLLGCLV Trigger: TACCAAGCAACCCAGCAACCTGAGCAAGCACATGAAGAAGTTCCACGCCGACATGCTCAAGAACGAGGCTCCGGAGAAGAAGGAGAGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | GCTGGGGAGGACGGGCTGCCAAGCTCTAGAAGAGAAGGCAAGGTCCTCCCTACAACAAAGGCATCCAGATaGCTGAAGTGCTGCTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: AGEDGLPSSRREGKVLPTTKASR*LKCCLQ Trigger: CTGTAAGCAGCACTTCAGCAATCTGGATGCCTTTGT...TGTAGGGAGGACCTTGCCTTCTCTTCTAGAGCTTGGCAGCCCGTCCTCCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS GCA 90 bp | GTGACTTGGTGGGGAGAGAGATCACGGTGGCTGTCTGGTTGTCAGTaGTCTCCGTGGGCAGGTAAGTTTGGTAGCCATGTTCAAAGACGA | + |
|
Preference number: 5 (lower is better) Translates to: VTWWGERSRWLSGCQ*SPWAGKFGSHVQRR Trigger: TCGTCTTTGAACATGGCTACCAAACTTACCTGCCCACGGAGAGCACTGACAACCAGACAGCCACCGTGATCTCTCTCCCCACCAAGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS CCA 90 bp | TGGGGAGAGAGATCACGGTGGCTGTCTGGTTGTCAGTGCTCTCCGTaGGCAGGTAAGTTTGGTAGCCATGTTCAAAGACGAACTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WGERSRWLSGCQCSP*AGKFGSHVQRRTLE Trigger: CTCCAGAGTTCGTCTTTGAACATGGCTACCAAACTTACCTGCCCACGGAGAGCACTGACAACCAGACAGCCACCGTGATCTCTCTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS-3UTR CAA 90 bp | CAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTGGCAGCCGCTCTGTTaGTGGGCCACAAAGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: QSYCGEFQLHIGISLGNHWQPLC*WATKAS Trigger: GGATGCCTTTGTGGCCCACAAACAGAGCGGCTGCCA...ATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | AGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTACGGTGGCTGTCTGGTaGTCAGTGCTCTCCGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPTVVNSNSTLESALVTITVAVW*SVLSVG Trigger: GCCCACGGAGAGCACTGACAACCAGACAGCCACCGT...AATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | CAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATGGACAGATCTGGCACTaGAAGGGTCGCTCGTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: QSYCGEFQLHIGISLGNHGQIWH*KGRSSE Trigger: CTCGGACGAGCGACCCTTCAAGTGCCAGATCTGTCC...ATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | CAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATCAGTGGAACGTCTTCTaGGCATCCAGCCTGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: QSYCGEFQLHIGISLGNHQWNVF*ASSLAT Trigger: GGTGGCCAGGCTGGATGCCAAGAAGACGTTCCACTG...ATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTCAGTCATCTTTTTGGTGCGTGACTaGGTGGGGAGAGAGATCACG | + |
|
Preference number: 5 (lower is better) Translates to: TGHSGNACREGTELCSVIFLVRD*VGREIT Trigger: CGTGATCTCTCTCCCCACCAAGTCACGCACCAAAAA...GATGACTGAACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CAA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAGGTGCTGTGGGCTTTTaGGTGCGTGACTTGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VFSPTVVNSNSTLESALVGAVGF*VRDLVG Trigger: CCCCACCAAGTCACGCACCAAAAAGCCCACAGCACC...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | GTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTAAGACACAATCACTGTGCTGCCGTTaGTGGCTGCGGAGCGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVNSNSTLESALVTIKTQSLCCR*WLRSES Trigger: GGACTCGCTCCGCAGCCACAAACGGCAGCACAGTGA...TTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTATGCCCCACGATGATCTaGACCCTCCCCTCGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VFSPTVVNSNSTLESALVCPTMI*TLPSLN Trigger: GTTCAGCGAGGGGAGGGTCAAGATCATCGTGGGGCA...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | CAGGGCACTCAGGGAATGCTTGTAGAGAAGGAACTGAGCTGTGTTCAGTCATCCACCAGGTTTGAGTTCTaGTTCTCGCCCCAGTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: QGTQGMLVEKELSCVQSSTRFEF*FSPQSL Trigger: TAGTGACTGGGGCGAGAACAAGAACTCAAACCTGGT...GGATGACTGAACACAGCTCAGTTCCTTCTCTACAAGCATTCCCTGAGTGCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS-3UTR CAA 90 bp | GTATTCAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTATGGATGCGCAGGTGCTaGTTAAGGCTGCTGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VFSPTVVNSNSTLESALVWMRRC*LRLLLS Trigger: GGACAGCAGCAGCCTTAACAAGCACCTGCGCATCCA...TACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTGAATAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | AGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTTTCCGCAGGGTGGATTaGCTGTCACCCAGGAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SPTVVNSNSTLESALVTIFRRVD*LSPRKS Trigger: CGACTTCCTGGGTGACAGCAAATCCACCCTGCGGAA...AATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAATACAATTATTTATACGGGACCAGGAGCCTCTCACAGTACTCCTCTCGCATGTGCGTCTTCAGCTaGTCCTTCCGGCTGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: IKYNYLYGTRSLSQYSSRMCVFS*SFRLKH Trigger: GTGCTTCAGCCGGAAGGACAAGCTGAAGACGCACAT...GCGAGAGGAGTACTGTGAGAGGCTCCTGGTCCCGTATAAATAATTGTATTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | CAGTCCTACTGTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATAACTTCTTCATGTGCTaGCTCAGGTTGCTGGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QSYCGEFQLHIGISLGNHNFFMC*LRLLGC Trigger: GCAACCCAGCAACCTGAGCAAGCACATGAAGAAGTT...ATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCACAGTAGGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | GTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTAAGACACAATTTTTGGTGCGTGACTaGGTGGGGAGAGAGATCACG | + |
|
Preference number: 5 (lower is better) Translates to: VVNSNSTLESALVTIKTQFLVRD*VGREIT Trigger: CGTGATCTCTCTCCCCACCAAGTCACGCACCAAAAA...TTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | GTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTAAGACACAATCGCAGTGCGGACACTaGAAGTTATTCCCACTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VVNSNSTLESALVTIKTQSQCGH*KLFPLC Trigger: GCACAGTGGGAATAACTTCAAGTGTCCGCACTGCGA...TTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAATACAATTATTTATACGGGACCAGGAGCCTCTCACAGTACTCCTCTCGCATGTGCTTGCTCAGGTaGCTGGGTTGCTTGGTATCG | + |
|
Preference number: 5 (lower is better) Translates to: IKYNYLYGTRSLSQYSSRMCLLR*LGCLVS Trigger: CGATACCAAGCAACCCAGCAACCTGAGCAAGCACAT...GCGAGAGGAGTACTGTGAGAGGCTCCTGGTCCCGTATAAATAATTGTATTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAATACAATTATTTATACGGGACCAGGAGCCTCTCACAGTACTCCTCTCGCCGTGGGCAGGTAAGTTaGGTAGCCATGTTCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: IKYNYLYGTRSLSQYSSRRGQVS*VAMFKD Trigger: GTCTTTGAACATGGCTACCAAACTTACCTGCCCACG...GCGAGAGGAGTACTGTGAGAGGCTCCTGGTCCCGTATAAATAATTGTATTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS-3UTR CAA 90 bp | GTGGTGAATTCCAACTCCACATTGGAATCAGCCTTGGTAACCATTAAGACACAAACAAAGGCATCCAGATaGCTGAAGTGCTGCTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: VVNSNSTLESALVTIKTQTKASR*LKCCLQ Trigger: CTGTAAGCAGCACTTCAGCAATCTGGATGCCTTTGT...TTGTGTCTTAATGGTTACCAAGGCTGATTCCAATGTGGAGTTGGAATTCACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CCA 72 bp | GGTTTCCCGTGCCTTCCTGGGTCCCAACCGGGGTGGTaGGGATCAGAGCCTGCTGCAGGGCGGCCCCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GFPCLPGSQPGW*GSEPAAGRPLP Trigger: CGGCAGGGGCCGCCCTGCAGCAGGCTCTGATCCCCACCACCCCGGTTGGGACCCAGGAAGGCACGGGAAACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CAA 72 bp | GGCACGTGGTTGGGACCGCTCTCCCCGGGACCATCCTaGCCCGGAGGGGCCCTGTTCTCAGTCTTGGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GTWLGPLSPGPS*PGGALFSVLAP Trigger: AGGCGCCAAGACTGAGAACAGGGCCCCTCCGGGCAAGGATGGTCCCGGGGAGAGCGGTCCCAACCACGTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS CAA 90 bp | GCAGGGCGGCCCCTGCCGTCTGATCATGGGTGGTCAGCAGGACAGTaGGCTGACTCAGGGCACCTGCTTCGCCGGGACACCCGGAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: AGRPLPSDHGWSAGQ*ADSGHLLRRDTRRT Trigger: AGTCCTCCGGGTGTCCCGGCGAAGCAGGTGCCCTGAGTCAGCCAACTGTCCTGCTGACCACCCATGATCAGACGGCAGGGGCCGCCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS GCA 72 bp | GGTGGTCAGCAGGACAGTTGGCTGACTCAGGGCACCTaGTTCGCCGGGACACCCGGAGGACTGAGGAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGQQDSWLTQGT*FAGTPGGLRRG Trigger: GCCCCTCCTCAGTCCTCCGGGTGTCCCGGCGAAGCAGGTGCCCTGAGTCAGCCAACTGTCCTGCTGACCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS GCA 72 bp | GCACGTGGTTGGGACCGCTCTCCCCGGGACCATCCTTaGCCGGAGGGGCCCTGTTCTCAGTCTTGGCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ARGWDRSPRDHP*PEGPCSQSWRL Trigger: AAGGCGCCAAGACTGAGAACAGGGCCCCTCCGGGCAAGGATGGTCCCGGGGAGAGCGGTCCCAACCACGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS CAA 90 bp | CTGACGTTGGGCACGTGGTTGGGACCGCTCTCCCCGGGACCATCCTaGCCCGGAGGGGCCCTGTTCTCAGTCTTGGCGCCTTCTCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LTLGTWLGPLSPGPS*PGGALFSVLAPSLC Trigger: GCACAGAGAAGGCGCCAAGACTGAGAACAGGGCCCCTCCGGGCAAGGATGGTCCCGGGGAGAGCGGTCCCAACCACGTGCCCAACGTCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS CAA 90 bp | GAGGCACCGCACTTGTCGCATCCGAAGGCTCTCTGGGTGCTGACGTaGGGCACGTGGTTGGGACCGCTCTCCCCGGGACCATCCTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: EAPHLSHPKALWVLT*GTWLGPLSPGPSLP Trigger: GGGCAAGGATGGTCCCGGGGAGAGCGGTCCCAACCACGTGCCCAACGTCAGCACCCAGAGAGCCTTCGGATGCGACAAGTGCGGTGCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS TCA 72 bp | CGGGACAGAGCAGGGCGGGGTGTGCCGCCCCGTGGATaGTGGAGTAAGTCTGCTTGGGCAGTTCCTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RDRAGRGVPPRG*WSKSAWAVPAG Trigger: CCCAGCAGGAACTGCCCAAGCAGACTTACTCCATCATCCACGGGGCGGCACACCCCGCCCTGCTCTGTCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS GCA 72 bp | GGTGGTGGGGATCAGAGCCTGCTGCAGGGCGGCCCCTaGCGTCTGATCATGGGTGGTCAGCAGGACAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGGDQSLLQGGP*RLIMGGQQDSW Trigger: CCAACTGTCCTGCTGACCACCCATGATCAGACGGCAGGGGCCGCCCTGCAGCAGGCTCTGATCCCCACCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS TCA 72 bp | GGCTGGACTGGAGGGGGACCTGGATTTGCTCTACGGTaGGGGGCGCAGCCGGCTGCTTGCTGGGTTCAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GWTGGGPGFALR*GAQPAACWVQG Trigger: ACCTTGAACCCAGCAAGCAGCCGGCTGCGCCCCTCACCGTAGAGCAAATCCAGGTCCCCCTCCAGTCCAGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CCA 72 bp | ACCGTGCTGGGGGCTGTCACCGGCGTGGTAGTCAGCTaGCAGCCGCTCTGTTTGTGGGCCACAAAGGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: TVLGAVTGVVVS*QPLCLWATKAS Trigger: GGATGCCTTTGTGGCCCACAAACAGAGCGGCTGCCAGCTGACTACCACGCCGGTGACAGCCCCCAGCACGGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS CCA 72 bp | GTCTGGGTGGCAGGCTCTGTCTCCTCTGCCACAAACTaGACCGTGCTGGGGGCTGTCACCGGCGTGGTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VWVAGSVSSATN*TVLGAVTGVVV Trigger: GACTACCACGCCGGTGACAGCCCCCAGCACGGTCCAGTTTGTGGCAGAGGAGACAGAGCCTGCCACCCAGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS CAA 72 bp | CCCCTGCCGTCTGATCATGGGTGGTCAGCAGGACAGTaGGCTGACTCAGGGCACCTGCTTCGCCGGGACACC | + |
|
Preference number: 6 (lower is better) Translates to: PLPSDHGWSAGQ*ADSGHLLRRDT Trigger: GGTGTCCCGGCGAAGCAGGTGCCCTGAGTCAGCCAACTGTCCTGCTGACCACCCATGATCAGACGGCAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CAA 72 bp | CACTTGTCGCATCCGAAGGCTCTCTGGGTGCTGACGTaGGGCACGTGGTTGGGACCGCTCTCCCCGGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: HLSHPKALWVLT*GTWLGPLSPGP Trigger: TGGTCCCGGGGAGAGCGGTCCCAACCACGTGCCCAACGTCAGCACCCAGAGAGCCTTCGGATGCGACAAGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS GCA 72 bp | GTGCTGCTTACAGAGGCCGCAGATGTGGATGTCCGGTaGCAGCTCCACCAGCACCGTGGTGCCTCCTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VLLTEAADVDVR*QLHQHRGASWD Trigger: ATCCCAGGAGGCACCACGGTGCTGGTGGAGCTGGCACCGGACATCCACATCTGCGGCCTCTGTAAGCAGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS GCA 72 bp | AGGAATGGAGTCAGCGGGACAGAGCAGGGCGGGGTGTaGCGCCCCGTGGATGATGGAGTAAGTCTGCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RNGVSGTEQGGV*RPVDDGVSLLG Trigger: CCCAAGCAGACTTACTCCATCATCCACGGGGCGGCACACCCCGCCCTGCTCTGTCCCGCTGACTCCATTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CCA 72 bp | GCTCCGACTGGTGCAGGCGACTGTGCTTCCGCAGGGTaGATTTGCTGTCACCCAGGAAGTCGCAGTGCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: APTGAGDCASAG*ICCHPGSRSAD Trigger: GTCCGCACTGCGACTTCCTGGGTGACAGCAAATCCACCCTGCGGAAGCACAGTCGCCTGCACCAGTCGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS GCA 72 bp | TCCTTTGCTTCCAAGGACAGAGTGACTGCAGGGGCCTaGTGGGCATCGCTTTCTTCAGCAGGGAGGCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SFASKDRVTAGA*WASLSSAGRPA Trigger: GGCGGGCCTCCCTGCTGAAGAAAGCGATGCCCAGCAGGCCCCTGCAGTCACTCTGTCCTTGGAAGCAAAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109162.9 ENSMUST00000124599.2 |
||
| CDS CCA 72 bp | TTTGCTTCCAAGGACAGAGTGACTGCAGGGGCCTGCTaGGCATCGCTTTCTTCAGCAGGGAGGCCCGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: FASKDRVTAGAC*ASLSSAGRPAG Trigger: ACCGGCGGGCCTCCCTGCTGAAGAAAGCGATGCCCAGCAGGCCCCTGCAGTCACTCTGTCCTTGGAAGCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109162.9 ENSMUST00000124599.2 |
||
| CDS CCA 72 bp | TCCGAGCACGTGATGCCCGAACTGGCAATGAATGTCTaGTTTCCCGTGCCTTCCTGGGTCCCAACCGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SEHVMPELAMNV*FPVPSWVPTGV Trigger: CACCCCGGTTGGGACCCAGGAAGGCACGGGAAACCAGACATTCATTGCCAGTTCGGGCATCACGTGCTCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CAA 72 bp | GACTGGTGCAGGCGACTGTGCTTCCGCAGGGTGGATTaGCTGTCACCCAGGAAGTCGCAGTGCGGACACTTG | + |
|
Preference number: 6 (lower is better) Translates to: DWCRRLCFRRVD*LSPRKSQCGHL Trigger: CAAGTGTCCGCACTGCGACTTCCTGGGTGACAGCAAATCCACCCTGCGGAAGCACAGTCGCCTGCACCAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CAA 90 bp | CTGGGGGCTGTCACCGGCGTGGTAGTCAGCTGGCAGCCGCTCTGTTaGTGGGCCACAAAGGCATCCAGATTGCTGAAGTGCTGCTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: LGAVTGVVVSWQPLC*WATKASRLLKCCLQ Trigger: CTGTAAGCAGCACTTCAGCAATCTGGATGCCTTTGTGGCCCACAAACAGAGCGGCTGCCAGCTGACTACCACGCCGGTGACAGCCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS GCA 72 bp | GCCAGCTCCACCAGCACCGTGGTGCCTCCTGGGATTTaGATCGATCCAGAAAAGGTGTCTCCTTCCACGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASSTSTVVPPGI*IDPEKVSPSTL Trigger: GAGCGTGGAAGGAGACACCTTTTCTGGATCGATGCAAATCCCAGGAGGCACCACGGTGCTGGTGGAGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS GCA 72 bp | ACAGTCACGTCCGAGTTCTTACTGTGGTACTCACTGTaGTGCCGTTTGTGGCTGCGGAGCGAGTCCTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TVTSEFLLWYSL*CRLWLRSESSR Trigger: GCGGGAGGACTCGCTCCGCAGCCACAAACGGCAGCACAGTGAGTACCACAGTAAGAACTCGGACGTGACTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CCA 72 bp | GTCCGGTGCCAGCTCCACCAGCACCGTGGTGCCTCCTaGGATTTGCATCGATCCAGAAAAGGTGTCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VRCQLHQHRGAS*DLHRSRKGVSF Trigger: GAAGGAGACACCTTTTCTGGATCGATGCAAATCCCAGGAGGCACCACGGTGCTGGTGGAGCTGGCACCGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS CCA 72 bp | AGATTGCTGAAGTGCTGCTTACAGAGGCCGCAGATGTaGATGTCCGGTGCCAGCTCCACCAGCACCGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLLKCCLQRPQM*MSGASSTSTVV Trigger: CACCACGGTGCTGGTGGAGCTGGCACCGGACATCCACATCTGCGGCCTCTGTAAGCAGCACTTCAGCAATCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS CCA 72 bp | ACCGGCGTGGTAGTCAGCTGGCAGCCGCTCTGTTTGTaGGCCACAAAGGCATCCAGATTGCTGAAGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TGVVVSWQPLCL*ATKASRLLKCC Trigger: GCAGCACTTCAGCAATCTGGATGCCTTTGTGGCCCACAAACAGAGCGGCTGCCAGCTGACTACCACGCCGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS CCA 72 bp | AAGATAGAGGGTGCCGTGGTGGCCACTGCGATGCTCTaGTCCCCATCGCTCACCACAGTCACTTCCGTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: KIEGAVVATAML*SPSLTTVTSVV Trigger: AACGACGGAAGTGACTGTGGTGAGCGATGGGGACCAGAGCATCGCAGTGGCCACCACGGCACCCTCTATCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CAA 72 bp | GTCACCGGCGTGGTAGTCAGCTGGCAGCCGCTCTGTTaGTGGGCCACAAAGGCATCCAGATTGCTGAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VTGVVVSWQPLC*WATKASRLLKC Trigger: GCACTTCAGCAATCTGGATGCCTTTGTGGCCCACAAACAGAGCGGCTGCCAGCTGACTACCACGCCGGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS CAA 90 bp | GATGTCCGGTGCCAGCTCCACCAGCACCGTGGTGCCTCCTGGGATTaGCATCGATCCAGAAAAGGTGTCTCCTTCCACGCTCGCGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: DVRCQLHQHRGASWD*HRSRKGVSFHARVH Trigger: ATGAACGCGAGCGTGGAAGGAGACACCTTTTCTGGATCGATGCAAATCCCAGGAGGCACCACGGTGCTGGTGGAGCTGGCACCGGACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS CAA 90 bp | GGGTGCTCCGACTGGTGCAGGCGACTGTGCTTCCGCAGGGTGGATTaGCTGTCACCCAGGAAGTCGCAGTGCGGACACTTGAAGTTATTC | + |
|
Preference number: 6 (lower is better) Translates to: GCSDWCRRLCFRRVD*LSPRKSQCGHLKLF Trigger: GAATAACTTCAAGTGTCCGCACTGCGACTTCCTGGGTGACAGCAAATCCACCCTGCGGAAGCACAGTCGCCTGCACCAGTCGGAGCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CAA 90 bp | CGGCTGCTCTGCCTGCCGCTCTCCTTCTTCTCCGGAGCCTCGTTCTaGAGCATGTCGGCGTGGAACTTCTTCATGTGCTTGCTCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RLLCLPLSFFSGASF*SMSAWNFFMCLLRL Trigger: CAACCTGAGCAAGCACATGAAGAAGTTCCACGCCGACATGCTCAAGAACGAGGCTCCGGAGAAGAAGGAGAGCGGCAGGCAGAGCAGCCG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CAA 90 bp | GTCAGCTGGCAGCCGCTCTGTTTGTGGGCCACAAAGGCATCCAGATaGCTGAAGTGCTGCTTACAGAGGCCGCAGATGTGGATGTCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: VSWQPLCLWATKASR*LKCCLQRPQMWMSG Trigger: ACCGGACATCCACATCTGCGGCCTCTGTAAGCAGCACTTCAGCAATCTGGATGCCTTTGTGGCCCACAAACAGAGCGGCTGCCAGCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS CAA 90 bp | ACAGTCACGTCCGAGTTCTTACTGTGGTACTCACTGTGCTGCCGTTaGTGGCTGCGGAGCGAGTCCTCCCGCATAAACGAGGCGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: TVTSEFLLWYSLCCR*WLRSESSRINEASQ Trigger: CTGTGACGCCTCGTTTATGCGGGAGGACTCGCTCCGCAGCCACAAACGGCAGCACAGTGAGTACCACAGTAAGAACTCGGACGTGACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS TCA 72 bp | GCCTGCCGCTCTCCTTCTTCTCCGGAGCCTCGTTCTTaGGCATGTCGGCGTGGAACTTCTTCATGTGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ACRSPSSPEPRS*ACRRGTSSCAC Trigger: GCAAGCACATGAAGAAGTTCCACGCCGACATGCTCAAGAACGAGGCTCCGGAGAAGAAGGAGAGCGGCAGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS TCA 72 bp | GTGAGGGGCGCAGCCGGCTGCTTGCTGGGTTCAAGGTaGAGCTGTACTACAGTCACGTCCGAGTTCTTACTG | + |
|
Preference number: 6 (lower is better) Translates to: VRGAAGCLLGSR*SCTTVTSEFLL Trigger: CAGTAAGAACTCGGACGTGACTGTAGTACAGCTTCACCTTGAACCCAGCAAGCAGCCGGCTGCGCCCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS GCA 72 bp | TGTGGATGTCCGGTGCCAGCTCCACCAGCACCGTGGTaGCTCCTGGGATTTGCATCGATCCAGAAAAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CGCPVPAPPAPW*LLGFASIQKRC Trigger: ACACCTTTTCTGGATCGATGCAAATCCCAGGAGGCACCACGGTGCTGGTGGAGCTGGCACCGGACATCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS GCA 72 bp | GTCACGTCCGAGTTCTTACTGTGGTACTCACTGTGCTaGCGTTTGTGGCTGCGGAGCGAGTCCTCCCGCATA | + |
|
Preference number: 6 (lower is better) Translates to: VTSEFLLWYSLC*RLWLRSESSRI Trigger: TATGCGGGAGGACTCGCTCCGCAGCCACAAACGGCAGCACAGTGAGTACCACAGTAAGAACTCGGACGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CCA 72 bp | GAGTTCTTACTGTGGTACTCACTGTGCTGCCGTTTGTaGCTGCGGAGCGAGTCCTCCCGCATAAACGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: EFLLWYSLCCRL*LRSESSRINEA Trigger: CGCCTCGTTTATGCGGGAGGACTCGCTCCGCAGCCACAAACGGCAGCACAGTGAGTACCACAGTAAGAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CAA 72 bp | TGCCAGCTCCACCAGCACCGTGGTGCCTCCTGGGATTaGCATCGATCCAGAAAAGGTGTCTCCTTCCACGCT | + |
|
Preference number: 6 (lower is better) Translates to: CQLHQHRGASWD*HRSRKGVSFHA Trigger: AGCGTGGAAGGAGACACCTTTTCTGGATCGATGCAAATCCCAGGAGGCACCACGGTGCTGGTGGAGCTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS TCA 72 bp | CCATCGCTCACCACAGTCACTTCCGTCGTTCCCTCCTaGATCAGAGCGTTAAGGCCTTCCAAGTCCGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSLTTVTSVVPS*IRALRPSKSEH Trigger: GTGCTCGGACTTGGAAGGCCTTAACGCTCTGATTCAGGAGGGAACGACGGAAGTGACTGTGGTGAGCGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS GCA 72 bp | TTGTGGGCCACAAAGGCATCCAGATTGCTGAAGTGCTaGTTACAGAGGCCGCAGATGTGGATGTCCGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LWATKASRLLKC*LQRPQMWMSGA Trigger: GGCACCGGACATCCACATCTGCGGCCTCTGTAAGCAGCACTTCAGCAATCTGGATGCCTTTGTGGCCCACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS GCA 72 bp | AAAGGTCCTTTCTCCAAGGGTGGCCGTTCTCTCCTTTaGTTCCAAGGACAGAGTGACTGCAGGGGCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KGPFSKGGRSLL*FQGQSDCRGLL Trigger: CAGCAGGCCCCTGCAGTCACTCTGTCCTTGGAAGCAAAGGAGAGAACGGCCACCCTTGGAGAAAGGACCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109162.9 ENSMUST00000124599.2 |
||
| CDS CAA 72 bp | CAGCCGCTCTGTTTGTGGGCCACAAAGGCATCCAGATaGCTGAAGTGCTGCTTACAGAGGCCGCAGATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QPLCLWATKASR*LKCCLQRPQMW Trigger: CCACATCTGCGGCCTCTGTAAGCAGCACTTCAGCAATCTGGATGCCTTTGTGGCCCACAAACAGAGCGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS CAA 72 bp | TGCCTGCCGCTCTCCTTCTTCTCCGGAGCCTCGTTCTaGAGCATGTCGGCGTGGAACTTCTTCATGTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CLPLSFFSGASF*SMSAWNFFMCL Trigger: CAAGCACATGAAGAAGTTCCACGCCGACATGCTCAAGAACGAGGCTCCGGAGAAGAAGGAGAGCGGCAGGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CAA 72 bp | TCCGAGTTCTTACTGTGGTACTCACTGTGCTGCCGTTaGTGGCTGCGGAGCGAGTCCTCCCGCATAAACGAG | + |
|
Preference number: 6 (lower is better) Translates to: SEFLLWYSLCCR*WLRSESSRINE Trigger: CTCGTTTATGCGGGAGGACTCGCTCCGCAGCCACAAACGGCAGCACAGTGAGTACCACAGTAAGAACTCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS GCA 72 bp | ACCAGGTTTGAGTTCTTGTTCTCGCCCCAGTCACTATaGTGCTTCCGATGGCACCTCAGAGAGTCATCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TRFEFLFSPQSL*CFRWHLRESSR Trigger: CCGGGATGACTCTCTGAGGTGCCATCGGAAGCAGCATAGTGACTGGGGCGAGAACAAGAACTCAAACCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS TCA 72 bp | CGCTCTGTTTGTGGGCCACAAAGGCATCCAGATTGCTaGAGTGCTGCTTACAGAGGCCGCAGATGTGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: RSVCGPQRHPDC*SAAYRGRRCGC Trigger: ACATCCACATCTGCGGCCTCTGTAAGCAGCACTTCAGCAATCTGGATGCCTTTGTGGCCCACAAACAGAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS TCA 72 bp | CAACCTGTCCGGAAGCAATGCCTTCTGAGGGGAAAGTaGCCAGGTTTGAGTTCTTGTTCTCGCCCCAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: QPVRKQCLLRGK*PGLSSCSRPSH Trigger: GTGACTGGGGCGAGAACAAGAACTCAAACCTGGTCACTTTCCCCTCAGAAGGCATTGCTTCCGGACAGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS GCA 72 bp | TGTTTGTGGGCCACAAAGGCATCCAGATTGCTGAAGTaGTGCTTACAGAGGCCGCAGATGTGGATGTCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: CLWATKASRLLK*CLQRPQMWMSG Trigger: ACCGGACATCCACATCTGCGGCCTCTGTAAGCAGCACTTCAGCAATCTGGATGCCTTTGTGGCCCACAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS GCA 72 bp | CGCAGGGTGGATTTGCTGTCACCCAGGAAGTCGCAGTaGGGACACTTGAAGTTATTCCCACTGTGCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: RRVDLLSPRKSQ*GHLKLFPLCLM Trigger: CATCAAGCACAGTGGGAATAACTTCAAGTGTCCGCACTGCGACTTCCTGGGTGACAGCAAATCCACCCTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS GCA 72 bp | AGGTTTGAGTTCTTGTTCTCGCCCCAGTCACTATGCTaGTTCCGATGGCACCTCAGAGAGTCATCCCGGACA | + |
|
Preference number: 6 (lower is better) Translates to: RFEFLFSPQSLC*FRWHLRESSRT Trigger: TGTCCGGGATGACTCTCTGAGGTGCCATCGGAAGCAGCATAGTGACTGGGGCGAGAACAAGAACTCAAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109162.9 |
||
| CDS CCA 72 bp | TTCTTCTCCGGAGCCTCGTTCTTGAGCATGTCGGCGTaGAACTTCTTCATGTGCTTGCTCAGGTTGCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: FFSGASFLSMSA*NFFMCLLRLLG Trigger: ACCCAGCAACCTGAGCAAGCACATGAAGAAGTTCCACGCCGACATGCTCAAGAACGAGGCTCCGGAGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087971.11 |
||
| CDS CCA 72 bp | AGATCACGGTGGCTGTCTGGTTGTCAGTGCTCTCCGTaGGCAGGTAAGTTTGGTAGCCATGTTCAAAGACGA | + |
|
Preference number: 6 (lower is better) Translates to: RSRWLSGCQCSP*AGKFGSHVQRR Trigger: TCGTCTTTGAACATGGCTACCAAACTTACCTGCCCACGGAGAGCACTGACAACCAGACAGCCACCGTGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||
| CDS TCA 72 bp | TCAAAGACGAACTCTGGAGCTGAAACTGTGATAGTCTaGGTCTCTGAACTGATGGTCGTTGTGGTGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SKTNSGAETVIV*VSELMVVVVVW Trigger: CCAGACCACCACAACGACCATCAGTTCAGAGACTCAGACTATCACAGTTTCAGCTCCAGAGTTCGTCTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087971.11 ENSMUST00000109161.3 ENSMUST00000109162.9 |
||