Pregenerated sensors for ZFP639 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027667Ensembl transcript IDs: ENSMUST00000029203.13, ENSMUST00000191783.6, ENSMUST00000192985.6, ENSMUST00000193119.6, ENSMUST00000193287.6, ENSMUST00000193789.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GACATTTGTGTGAAGTCTGCTCCGAAAGCCACATACTTGACACACGAAGAAATTCTTAAAAGGCTGCACTaGCCATGGCCACCACTGCCA | + |
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Preference number: 2 (lower is better) Translates to: DICVKSAPKATYLTHEEILKRLH*PWPPLP Trigger: TGGCAGTGGTGGCCATGGGCAGTGCAGCCTTTTAAG...AATTTCTTCGTGTGTCAAGTATGTGGCTTTCGGAGCAGACTTCACACAAATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTTCAGATAGATGTGAATTTAGATGCTTGCAATATTCCAACATGCTGGAAAAGGCTGCACTGCCCATaGCCACCACTGCCACACTTG | + |
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Preference number: 2 (lower is better) Translates to: SLQIDVNLDACNIPTCWKRLHCP*PPLPHL Trigger: CAAGTGTGGCAGTGGTGGCCATGGGCAGTGCAGCCT...TTTCCAGCATGTTGGAATATTGCAAGCATCTAAATTCACATCTATCTGAAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| 3UTR CAA 90 bp | GTGTCTGTTGACATTTGTGTGAAGTCTGCTCCGAAAGCCACATACTaGACACACGAAGAAATTTTTACATTTGTCAAAGGTGATCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: VSVDICVKSAPKATY*THEEIFTFVKGDLA Trigger: AGCAAGATCACCTTTGACAAATGTAAAAATTTCTTCGTGTGTCAAGTATGTGGCTTTCGGAGCAGACTTCACACAAATGTCAACAGACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS-3UTR GCA 90 bp | TTGCTTAAAAGGCTGCACTGCCCATGGCCACCACTGCCACACTTGTCACTCAGCGCTGAAGTGCGTGTCTaGAATGTGCTGGCTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LLKRLHCPWPPLPHLSLSAEVRV*NVLAEV Trigger: AACCTCAGCCAGCACATTGCAGACACGCACTTCAGC...GCTGAGTGACAAGTGTGGCAGTGGTGGCCATGGGCAGTGCAGCCTTTTAAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS-3UTR GCA 90 bp | AAGGTGATCTTGCTTAAAAGGCTGCACTGCCCATGGCCACCACTGCCACACTTGCTGCTTGAGGAGAACTaGACGTCACACTGCTCACAC | + |
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Preference number: 4 (lower is better) Translates to: KVILLKRLHCPWPPLPHLLLEEN*TSHCSH Trigger: GTGTGAGCAGTGTGACGTGCAGTTCTCCTCAAGCAG...CAAGTGTGGCAGTGGTGGCCATGGGCAGTGCAGCCTTTTAAGCAAGATCACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS-3UTR TCA 90 bp | GATAGCCACGTGTCTGTTGACATTTGTGTGAAGTCTGCTCCGAAAGCCACATACGTAGAGCTCACTGCTTaGGGAGAACTGCACGTCACA | + |
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Preference number: 4 (lower is better) Translates to: DSHVSVDICVKSAPKATYVELTA*GELHVT Trigger: TGTGACGTGCAGTTCTCCTCAAGCAGTGAGCTCTAC...GTATGTGGCTTTCGGAGCAGACTTCACACAAATGTCAACAGACACGTGGCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS-3UTR GCA 90 bp | GATAGCCACGTGTCTGTTGACATTTGTGTGAAGTCTGCTCCGAAAGCCACATACTGCGTGTCTGCAATGTaGTGGCTGAGGTTTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSHVSVDICVKSAPKATYCVSAM*WLRFQV Trigger: CACCTGAAACCTCAGCCAGCACATTGCAGACACGCA...GTATGTGGCTTTCGGAGCAGACTTCACACAAATGTCAACAGACACGTGGCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS-3UTR GCA 90 bp | GATGTGAATTTAGATGCTTGCAATATTCCAACATGCTGGAAAAGCCCTTCCCACGCAGGTAGAGCTCACTaGTTGAGGAGAACTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: DVNLDACNIPTCWKSPSHAGRAH*LRRTAR Trigger: ACGTGCAGTTCTCCTCAAGCAGTGAGCTCTACCTGC...GTGGGAAGGGCTTTTCCAGCATGTTGGAATATTGCAAGCATCTAAATTCACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS-3UTR GCA 90 bp | ACAAACATGAGGGAATATTTTAGTATGCTCGATAGCCACGTGTCTGTTGACATTAGGTGGTCGCTGAAGTaGGTGTCTGCAATGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TNMREYFSMLDSHVSVDIRWSLK*VSAMCW Trigger: CCAGCACATTGCAGACACGCACTTCAGCGACCACCT...AATGTCAACAGACACGTGGCTATCGAGCATACTAAAATATTCCCTCATGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS-3UTR TCA 90 bp | AGATGTGAATTTAGATGCTTGCAATATTCCAACATGCTGGAAAAGCCCTTCCCAAGTAAAGGTGGTCGCTaGAGTGCGTGTCTGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: RCEFRCLQYSNMLEKPFPSKGGR*SACLQC Trigger: ACATTGCAGACACGCACTTCAGCGACCACCTTTACT...TGGGAAGGGCTTTTCCAGCATGTTGGAATATTGCAAGCATCTAAATTCACATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS-3UTR CCA 90 bp | GATAGCCACGTGTCTGTTGACATTTGTGTGAAGTCTGCTCCGAAAGCCACATACTTCCATCTGCAAATTTaGGCAAGTCATTTGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSHVSVDICVKSAPKATYFHLQI*ASHLLS Trigger: AGACAGCAAATGACTTGCCCAAATTTGCAGATGGAA...GTATGTGGCTTTCGGAGCAGACTTCACACAAATGTCAACAGACACGTGGCTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS-3UTR GCA 90 bp | GACATTTGTGTGAAGTCTGCTCCGAAAGCCACATACTTGACACACGAAGAAATTTTTGGGCAAGTCATTTaGTGTCTCAGGATCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: DICVKSAPKATYLTHEEIFGQVI*CLRIRI Trigger: GATTCTGATCCTGAGACAGCAAATGACTTGCCCAAA...AATTTCTTCGTGTGTCAAGTATGTGGCTTTCGGAGCAGACTTCACACAAATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS-3UTR GCA 90 bp | AGATGTGAATTTAGATGCTTGCAATATTCCAACATGCTGGAAAAGCCCTTCCCAGGCCTTGGTTCCATCTaGAAATTTGGGCAAGTCATT | + |
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Preference number: 4 (lower is better) Translates to: RCEFRCLQYSNMLEKPFPGLGSI*KFGQVI Trigger: AATGACTTGCCCAAATTTGCAGATGGAACCAAGGCC...TGGGAAGGGCTTTTCCAGCATGTTGGAATATTGCAAGCATCTAAATTCACATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS-3UTR CCA 90 bp | AGATGTGAATTTAGATGCTTGCAATATTCCAACATGCTGGAAAAGCCCTTCCCATCCTGTTTCTGGCCTTaGTTCCATCTGCAAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RCEFRCLQYSNMLEKPFPSCFWP*FHLQIW Trigger: CCAAATTTGCAGATGGAACCAAGGCCAGAAACAGGA...TGGGAAGGGCTTTTCCAGCATGTTGGAATATTGCAAGCATCTAAATTCACATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS-3UTR CCA 90 bp | GTCATCACAAACATGAGGGAATATTTTAGTATGCTCGATAGCCACGTGTCTGTTTCTGATTCCTGTTTCTaGCCTTGGTTCCATCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VITNMREYFSMLDSHVSVSDSCF*PWFHLQ Trigger: TTGCAGATGGAACCAAGGCCAGAAACAGGAATCAGA...AACAGACACGTGGCTATCGAGCATACTAAAATATTCCCTCATGTTTGTGATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS-3UTR CCA 90 bp | TCCCTTCAGATAGATGTGAATTTAGATGCTTGCAATATTCCAACATGCTGGAAAGTGGAAAAGACAGTGTaGTCTAGAATCCTAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLQIDVNLDACNIPTCWKVEKTV*SRILST Trigger: TGTGCTTAGGATTCTAGACCACACTGTCTTTTCCAC...TTTCCAGCATGTTGGAATATTGCAAGCATCTAAATTCACATCTATCTGAAGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| 3UTR CAA 72 bp | GACATTTGTGTGAAGTCTGCTCCGAAAGCCACATACTaGACACACGAAGAAATTTTTACATTTGTCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DICVKSAPKATY*THEEIFTFVKG Trigger: ACCTTTGACAAATGTAAAAATTTCTTCGTGTGTCAAGTATGTGGCTTTCGGAGCAGACTTCACACAAATGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS GCA 90 bp | CTCAGCTCAATCAGTCTGCGAGCGTGCTCGTTGACAACGTGGCTGTaGAAGTCCTCAGGGTCCCCTGTCTCGTGCTCACAGAACTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: LSSISLRACSLTTWL*KSSGSPVSCSQNWH Trigger: GTGCCAGTTCTGTGAGCACGAGACAGGGGACCCTGAGGACTTGCACAGCCACGTTGTCAACGAGCACGCTCGCAGACTGATTGAGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS GCA 90 bp | CCACCACTGCCACACTTGTCACTCAGCTCAATCAGTCTGCGAGCGTaGTCGTTGACAACGTGGCTGTGCAAGTCCTCAGGGTCCCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: PPLPHLSLSSISLRA*SLTTWLCKSSGSPV Trigger: GACAGGGGACCCTGAGGACTTGCACAGCCACGTTGTCAACGAGCACGCTCGCAGACTGATTGAGCTGAGTGACAAGTGTGGCAGTGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CCA 90 bp | TGGCTGTGCAAGTCCTCAGGGTCCCCTGTCTCGTGCTCACAGAACTaGCACAGGTACTGCTCATCACGGCTATGCTCCTGGAAGTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: WLCKSSGSPVSCSQN*HRYCSSRLCSWKCR Trigger: CCTGCACTTCCAGGAGCATAGCCGTGATGAGCAGTACCTGTGCCAGTTCTGTGAGCACGAGACAGGGGACCCTGAGGACTTGCACAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 ENSMUST00000193789.2 |
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| CDS TCA 90 bp | TGCCACACTTGTCACTCAGCTCAATCAGTCTGCGAGCGTGCTCGTTaGCAACGTGGCTGTGCAAGTCCTCAGGGTCCCCTGTCTCGTGCT | + |
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Preference number: 5 (lower is better) Translates to: CHTCHSAQSVCERAR*QRGCASPQGPLSRA Trigger: AGCACGAGACAGGGGACCCTGAGGACTTGCACAGCCACGTTGTCAACGAGCACGCTCGCAGACTGATTGAGCTGAGTGACAAGTGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS GCA 90 bp | TCGTTGACAACGTGGCTGTGCAAGTCCTCAGGGTCCCCTGTCTCGTaGTCACAGAACTGGCACAGGTACTGCTCATCACGGCTATGCTCC | + |
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Preference number: 5 (lower is better) Translates to: SLTTWLCKSSGSPVS*SQNWHRYCSSRLCS Trigger: GGAGCATAGCCGTGATGAGCAGTACCTGTGCCAGTTCTGTGAGCACGAGACAGGGGACCCTGAGGACTTGCACAGCCACGTTGTCAACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 ENSMUST00000193789.2 |
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| CDS TCA 90 bp | CTCATCACGGCTATGCTCCTGGAAGTGCAGGTAGAGCTCACTGCTTaGGGAGAACTGCACGTCACACTGCTCACACCAGTAAAGGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: LITAMLLEVQVELTA*GELHVTLLTPVKVV Trigger: GACCACCTTTACTGGTGTGAGCAGTGTGACGTGCAGTTCTCCTCAAGCAGTGAGCTCTACCTGCACTTCCAGGAGCATAGCCGTGATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 ENSMUST00000193789.2 |
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| CDS GCA 90 bp | ACTGCTCATCACGGCTATGCTCCTGGAAGTGCAGGTAGAGCTCACTaGTTGAGGAGAACTGCACGTCACACTGCTCACACCAGTAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: TAHHGYAPGSAGRAH*LRRTARHTAHTSKG Trigger: ACCTTTACTGGTGTGAGCAGTGTGACGTGCAGTTCTCCTCAAGCAGTGAGCTCTACCTGCACTTCCAGGAGCATAGCCGTGATGAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 ENSMUST00000193789.2 |
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| CDS GCA 90 bp | GTCACACTGCTCACACCAGTAAAGGTGGTCGCTGAAGTGCGTGTCTaGAATGTGCTGGCTGAGGTTTCAGGTGAGGCACATTCTTCATCA | + |
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Preference number: 5 (lower is better) Translates to: VTLLTPVKVVAEVRV*NVLAEVSGEAHSSS Trigger: TGATGAAGAATGTGCCTCACCTGAAACCTCAGCCAGCACATTGCAGACACGCACTTCAGCGACCACCTTTACTGGTGTGAGCAGTGTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS-3UTR CAA 90 bp | CTTAAAAGGCTGCACTGCCCATGGCCACCACTGCCACACTTGTCACTCAGCTCATTCCTGTTTCTGGCCTaGGTTCCATCTGCAAATTTG | + |
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Preference number: 5 (lower is better) Translates to: LKRLHCPWPPLPHLSLSSFLFLA*VPSANL Trigger: CAAATTTGCAGATGGAACCAAGGCCAGAAACAGGAA...TGAGCTGAGTGACAAGTGTGGCAGTGGTGGCCATGGGCAGTGCAGCCTTTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS GCA 90 bp | GTCACACTGCTCACACCAGTAAAGGTGGTCGCTGAAGTGCGTGTCTaGAATGTGCTGGCTGAGGTTCTCAAAGATCACAGTCTTGTAATC | + |
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Preference number: 5 (lower is better) Translates to: VTLLTPVKVVAEVRV*NVLAEVLKDHSLVI Trigger: GATTACAAGACTGTGATCTTTGAGAACCTCAGCCAGCACATTGCAGACACGCACTTCAGCGACCACCTTTACTGGTGTGAGCAGTGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CCA 90 bp | GCTCTCAGGAGAGGCCACTTCTGTTGGGCAGTCACATTCAAAGCCTaGCCCTTGTCAAGAATTTTACAGAGTTTAGCTGGTGGTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: ALRRGHFCWAVTFKA*PLSRILQSLAGGSS Trigger: TGAAGAACCACCAGCTAAACTCTGTAAAATTCTTGACAAGGGCCAGGCTTTGAATGTGACTGCCCAACAGAAGTGGCCTCTCCTGAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CCA 90 bp | CACATTCAAAGCCTGGCCCTTGTCAAGAATTTTACAGAGTTTAGCTaGTGGTTCTTCATCGGCCTGGTCTTGGAGGCTCTCAGAGGAATT | + |
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Preference number: 5 (lower is better) Translates to: HIQSLALVKNFTEFS*WFFIGLVLEALRGI Trigger: AATTCCTCTGAGAGCCTCCAAGACCAGGCCGATGAAGAACCACCAGCTAAACTCTGTAAAATTCTTGACAAGGGCCAGGCTTTGAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS-3UTR CAA 90 bp | GACATTTGTGTGAAGTCTGCTCCGAAAGCCACATACTTGACACACGAAGAAATTGGTAGAGCTCACTGCTaGAGGAGAACTGCACGTCAC | + |
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Preference number: 5 (lower is better) Translates to: DICVKSAPKATYLTHEEIGRAHC*RRTARH Trigger: GTGACGTGCAGTTCTCCTCAAGCAGTGAGCTCTACC...AATTTCTTCGTGTGTCAAGTATGTGGCTTTCGGAGCAGACTTCACACAAATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS CCA 90 bp | ATTCAAAGCCTGGCCCTTGTCAAGAATTTTACAGAGTTTAGCTGGTaGTTCTTCATCGGCCTGGTCTTGGAGGCTCTCAGAGGAATTGTT | + |
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Preference number: 5 (lower is better) Translates to: IQSLALVKNFTEFSW*FFIGLVLEALRGIV Trigger: AACAATTCCTCTGAGAGCCTCCAAGACCAGGCCGATGAAGAACCACCAGCTAAACTCTGTAAAATTCTTGACAAGGGCCAGGCTTTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS-3UTR CAA 90 bp | GATAGCCACGTGTCTGTTGACATTTGTGTGAAGTCTGCTCCGAAAGCCACATACATTTGGGCAAGTCATTaGCTGTCTCAGGATCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: DSHVSVDICVKSAPKATYIWASH*LSQDQN Trigger: ATTCTGATCCTGAGACAGCAAATGACTTGCCCAAAT...GTATGTGGCTTTCGGAGCAGACTTCACACAAATGTCAACAGACACGTGGCTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS TCA 90 bp | GTCTTCAGAGATTGCATGAACTTCTACAGCAATTGGGACGTCTTCTaGGGTATGAACTTCTATAGGGCTCTCCTCTTGAGTATGCTGATG | + |
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Preference number: 5 (lower is better) Translates to: VFRDCMNFYSNWDVF*GMNFYRALLLSMLM Trigger: CATCAGCATACTCAAGAGGAGAGCCCTATAGAAGTTCATACCTCAGAAGACGTCCCAATTGCTGTAGAAGTTCATGCAATCTCTGAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS-3UTR CAA 90 bp | ACAAACATGAGGGAATATTTTAGTATGCTCGATAGCCACGTGTCTGTTGACATTGTTCCATCTGCAAATTaGGGCAAGTCATTTGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: TNMREYFSMLDSHVSVDIVPSAN*GKSFAV Trigger: GACAGCAAATGACTTGCCCAAATTTGCAGATGGAAC...AATGTCAACAGACACGTGGCTATCGAGCATACTAAAATATTCCCTCATGTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS GCA 72 bp | ACGTGGCTGTGCAAGTCCTCAGGGTCCCCTGTCTCGTaGTCACAGAACTGGCACAGGTACTGCTCATCACGG | + |
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Preference number: 6 (lower is better) Translates to: TWLCKSSGSPVS*SQNWHRYCSSR Trigger: CCGTGATGAGCAGTACCTGTGCCAGTTCTGTGAGCACGAGACAGGGGACCCTGAGGACTTGCACAGCCACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 ENSMUST00000193789.2 |
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| CDS CAA 90 bp | CTGCCACACTTGTCACTCAGCTCAATCAGTCTGCGAGCGTGCTCGTaGACAACGTGGCTGTGCAAGTCCTCAGGGTCCCCTGTCTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: LPHLSLSSISLRACS*TTWLCKSSGSPVSC Trigger: GCACGAGACAGGGGACCCTGAGGACTTGCACAGCCACGTTGTCAACGAGCACGCTCGCAGACTGATTGAGCTGAGTGACAAGTGTGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CAA 72 bp | AAAAGGCTGCACTGCCCATGGCCACCACTGCCACACTaGTCACTCAGCTCAATCAGTCTGCGAGCGTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: KRLHCPWPPLPH*SLSSISLRACS Trigger: CGAGCACGCTCGCAGACTGATTGAGCTGAGTGACAAGTGTGGCAGTGGTGGCCATGGGCAGTGCAGCCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS GCA 72 bp | CACGGCTATGCTCCTGGAAGTGCAGGTAGAGCTCACTaGTTGAGGAGAACTGCACGTCACACTGCTCACACC | + |
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Preference number: 6 (lower is better) Translates to: HGYAPGSAGRAH*LRRTARHTAHT Trigger: GGTGTGAGCAGTGTGACGTGCAGTTCTCCTCAAGCAGTGAGCTCTACCTGCACTTCCAGGAGCATAGCCGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 ENSMUST00000193789.2 |
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| CDS GCA 72 bp | CCACACTTGTCACTCAGCTCAATCAGTCTGCGAGCGTaGTCGTTGACAACGTGGCTGTGCAAGTCCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PHLSLSSISLRA*SLTTWLCKSSG Trigger: CCCTGAGGACTTGCACAGCCACGTTGTCAACGAGCACGCTCGCAGACTGATTGAGCTGAGTGACAAGTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CAA 72 bp | ACCACTGCTGTTGGCTCTCAGGAGAGGCCACTTCTGTaGGGCAGTCACATTCAAAGCCTGGCCCTTGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: TTAVGSQERPLL*GSHIQSLALVK Trigger: CTTGACAAGGGCCAGGCTTTGAATGTGACTGCCCAACAGAAGTGGCCTCTCCTGAGAGCCAACAGCAGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CAA 72 bp | GGCTATGCTCCTGGAAGTGCAGGTAGAGCTCACTGCTaGAGGAGAACTGCACGTCACACTGCTCACACCAGT | + |
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Preference number: 6 (lower is better) Translates to: GYAPGSAGRAHC*RRTARHTAHTS Trigger: ACTGGTGTGAGCAGTGTGACGTGCAGTTCTCCTCAAGCAGTGAGCTCTACCTGCACTTCCAGGAGCATAGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 ENSMUST00000193789.2 |
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| CDS CAA 90 bp | GCTCATCACGGCTATGCTCCTGGAAGTGCAGGTAGAGCTCACTGCTaGAGGAGAACTGCACGTCACACTGCTCACACCAGTAAAGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: AHHGYAPGSAGRAHC*RRTARHTAHTSKGG Trigger: ACCACCTTTACTGGTGTGAGCAGTGTGACGTGCAGTTCTCCTCAAGCAGTGAGCTCTACCTGCACTTCCAGGAGCATAGCCGTGATGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 ENSMUST00000193789.2 |
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| CDS TCA 72 bp | GCTATGCTCCTGGAAGTGCAGGTAGAGCTCACTGCTTaGGGAGAACTGCACGTCACACTGCTCACACCAGTA | + |
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Preference number: 6 (lower is better) Translates to: AMLLEVQVELTA*GELHVTLLTPV Trigger: TACTGGTGTGAGCAGTGTGACGTGCAGTTCTCCTCAAGCAGTGAGCTCTACCTGCACTTCCAGGAGCATAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 ENSMUST00000193789.2 |
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| CDS GCA 72 bp | TCTTGCTTAAAAGGCTGCACTGCCCATGGCCACCACTaGCACACTTGTCACTCAGCTCAATCAGTCTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: SCLKGCTAHGHH*HTCHSAQSVCE Trigger: CTCGCAGACTGATTGAGCTGAGTGACAAGTGTGGCAGTGGTGGCCATGGGCAGTGCAGCCTTTTAAGCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS GCA 72 bp | CTCACACCAGTAAAGGTGGTCGCTGAAGTGCGTGTCTaGAATGTGCTGGCTGAGGTTTCAGGTGAGGCACAT | + |
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Preference number: 6 (lower is better) Translates to: LTPVKVVAEVRV*NVLAEVSGEAH Trigger: ATGTGCCTCACCTGAAACCTCAGCCAGCACATTGCAGACACGCACTTCAGCGACCACCTTTACTGGTGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193789.2 |
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| CDS GCA 72 bp | CTCACACCAGTAAAGGTGGTCGCTGAAGTGCGTGTCTaGAATGTGCTGGCTGAGGTTCTCAAAGATCACAGT | + |
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Preference number: 6 (lower is better) Translates to: LTPVKVVAEVRV*NVLAEVLKDHS Trigger: ACTGTGATCTTTGAGAACCTCAGCCAGCACATTGCAGACACGCACTTCAGCGACCACCTTTACTGGTGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CCA 72 bp | CAGGGCTGGGAACCAGGTAGCTCTGATTCCTGTTTCTaGCCTTGGTTCCATCTGCAAATTTGGGCAAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: QGWEPGSSDSCF*PWFHLQIWASH Trigger: ATGACTTGCCCAAATTTGCAGATGGAACCAAGGCCAGAAACAGGAATCAGAGCTACCTGGTTCCCAGCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000192985.6 ENSMUST00000193119.6 ENSMUST00000193287.6 ENSMUST00000193789.2 |
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| CDS CCA 72 bp | AGCCTGGCCCTTGTCAAGAATTTTACAGAGTTTAGCTaGTGGTTCTTCATCGGCCTGGTCTTGGAGGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SLALVKNFTEFS*WFFIGLVLEAL Trigger: GAGAGCCTCCAAGACCAGGCCGATGAAGAACCACCAGCTAAACTCTGTAAAATTCTTGACAAGGGCCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CAA 90 bp | AGGAGAGGCCACTTCTGTTGGGCAGTCACATTCAAAGCCTGGCCCTaGTCAAGAATTTTACAGAGTTTAGCTGGTGGTTCTTCATCGGCC | + |
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Preference number: 6 (lower is better) Translates to: RRGHFCWAVTFKAWP*SRILQSLAGGSSSA Trigger: GGCCGATGAAGAACCACCAGCTAAACTCTGTAAAATTCTTGACAAGGGCCAGGCTTTGAATGTGACTGCCCAACAGAAGTGGCCTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CAA 90 bp | CTTGTAGAGACCACTGCTGTTGGCTCTCAGGAGAGGCCACTTCTGTaGGGCAGTCACATTCAAAGCCTGGCCCTTGTCAAGAATTTTACA | + |
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Preference number: 6 (lower is better) Translates to: LVETTAVGSQERPLL*GSHIQSLALVKNFT Trigger: TGTAAAATTCTTGACAAGGGCCAGGCTTTGAATGTGACTGCCCAACAGAAGTGGCCTCTCCTGAGAGCCAACAGCAGTGGTCTCTACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CCA 72 bp | CTGGCCCTTGTCAAGAATTTTACAGAGTTTAGCTGGTaGTTCTTCATCGGCCTGGTCTTGGAGGCTCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LALVKNFTEFSW*FFIGLVLEALR Trigger: TCTGAGAGCCTCCAAGACCAGGCCGATGAAGAACCACCAGCTAAACTCTGTAAAATTCTTGACAAGGGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CCA 72 bp | ATTCACAAAGTTCACACTTGTAGAGACCACTGCTGTTaGCTCTCAGGAGAGGCCACTTCTGTTGGGCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: IHKVHTCRDHCC*LSGEATSVGQS Trigger: TGACTGCCCAACAGAAGTGGCCTCTCCTGAGAGCCAACAGCAGTGGTCTCTACAAGTGTGAACTTTGTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CAA 72 bp | ACAGAGTTTAGCTGGTGGTTCTTCATCGGCCTGGTCTaGGAGGCTCTCAGAGGAATTGTTCTCTGCCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: TEFSWWFFIGLV*EALRGIVLCLY Trigger: ATAGAGGCAGAGAACAATTCCTCTGAGAGCCTCCAAGACCAGGCCGATGAAGAACCACCAGCTAAACTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CCA 72 bp | TGGGAACCAGGTAGCTCTGATTCCTGTTTCTGGCCTTaGTTCCATCTGCAAATTTGGGCAAGTCATTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: WEPGSSDSCFWP*FHLQIWASHLL Trigger: CAGCAAATGACTTGCCCAAATTTGCAGATGGAACCAAGGCCAGAAACAGGAATCAGAGCTACCTGGTTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000192985.6 ENSMUST00000193119.6 ENSMUST00000193287.6 ENSMUST00000193789.2 |
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| CDS GCA 72 bp | GTAGCTCTGATTCCTGTTTCTGGCCTTGGTTCCATCTaGAAATTTGGGCAAGTCATTTGCTGTCTCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: VALIPVSGLGSI*KFGQVICCLRI Trigger: GATCCTGAGACAGCAAATGACTTGCCCAAATTTGCAGATGGAACCAAGGCCAGAAACAGGAATCAGAGCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000192985.6 ENSMUST00000193119.6 ENSMUST00000193287.6 ENSMUST00000193789.2 |
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| CDS CCA 72 bp | AGAGGCCACTTCTGTTGGGCAGTCACATTCAAAGCCTaGCCCTTGTCAAGAATTTTACAGAGTTTAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: RGHFCWAVTFKA*PLSRILQSLAG Trigger: ACCAGCTAAACTCTGTAAAATTCTTGACAAGGGCCAGGCTTTGAATGTGACTGCCCAACAGAAGTGGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CAA 72 bp | TCCTTACACACCCGACACACATTCGAGTCAGTGCGCTaGTGTTTCAGGATCACATGTTGCTTTAGGTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SLHTRHTFESVR*CFRITCCFRSE Trigger: TTCTGACCTAAAGCAACATGTGATCCTGAAACACAAGCGCACTGACTCGAATGTGTGTCGGGTGTGTAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CCA 72 bp | TCAACTTCAGTAGATTTTTCTGTGGAAAAGACAGTGTaGTCTAGAATCCTAAGCACAGGGCTGGGAACCAGG | + |
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Preference number: 6 (lower is better) Translates to: STSVDFSVEKTV*SRILSTGLGTR Trigger: CCTGGTTCCCAGCCCTGTGCTTAGGATTCTAGACCACACTGTCTTTTCCACAGAAAAATCTACTGAAGTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000192985.6 ENSMUST00000193119.6 ENSMUST00000193287.6 ENSMUST00000193789.2 |
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| CDS CAA 72 bp | CACTTCTGTTGGGCAGTCACATTCAAAGCCTGGCCCTaGTCAAGAATTTTACAGAGTTTAGCTGGTGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: HFCWAVTFKAWP*SRILQSLAGGS Trigger: AGAACCACCAGCTAAACTCTGTAAAATTCTTGACAAGGGCCAGGCTTTGAATGTGACTGCCCAACAGAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CAA 72 bp | TCTTCATGGAGTTTGGCGTGTTCAATGAGAAGCATGTaGGTAGAGAAGCTTTCCTTACACACCCGACACACA | + |
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Preference number: 6 (lower is better) Translates to: SSWSLACSMRSM*VEKLSLHTRHT Trigger: TGTGTGTCGGGTGTGTAAGGAAAGCTTCTCTACCAACATGCTTCTCATTGAACACGCCAAACTCCATGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CAA 90 bp | AAGAATTTTACAGAGTTTAGCTGGTGGTTCTTCATCGGCCTGGTCTaGGAGGCTCTCAGAGGAATTGTTCTCTGCCTCTATATCATAGTC | + |
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Preference number: 6 (lower is better) Translates to: KNFTEFSWWFFIGLV*EALRGIVLCLYIIV Trigger: GACTATGATATAGAGGCAGAGAACAATTCCTCTGAGAGCCTCCAAGACCAGGCCGATGAAGAACCACCAGCTAAACTCTGTAAAATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS TCA 72 bp | GATTGCATGAACTTCTACAGCAATTGGGACGTCTTCTaGGGTATGAACTTCTATAGGGCTCTCCTCTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: DCMNFYSNWDVF*GMNFYRALLLS Trigger: ACTCAAGAGGAGAGCCCTATAGAAGTTCATACCTCAGAAGACGTCCCAATTGCTGTAGAAGTTCATGCAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193287.6 |
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| CDS CAA 90 bp | AATTTGGGCAAGTCATTTGCTGTCTCAGGATCAGAATCATCATCTTaGTTGTCAAAATATTTTAAGTCTGGCTGTCTCATAGAGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: NLGKSFAVSGSESSS*LSKYFKSGCLIEQT Trigger: TGTCTGCTCTATGAGACAGCCAGACTTAAAATATTTTGACAACAAAGATGATGATTCTGATCCTGAGACAGCAAATGACTTGCCCAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029203.13 ENSMUST00000191783.6 ENSMUST00000193119.6 ENSMUST00000193287.6 ENSMUST00000193789.2 |
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