Pregenerated sensors for ZFP637 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059689Ensembl transcript IDs: ENSMUST00000112858.8, ENSMUST00000112859.8, ENSMUST00000112860.2, ENSMUST00000112861.8, ENSMUST00000134526.8, ENSMUST00000136889.8, ENSMUST00000137224.8, ENSMUST00000164472.8, ENSMUST00000223041.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACCTTCTGCCTCACTCCAGGTGAGTCTTCCTGGAGGGCCTTAGACTCCGGGGACCCAGCTTCTCTCTTCTaGAAGAGCTCTGGAAATCCC | + |
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Preference number: 2 (lower is better) Translates to: TFCLTPGESSWRALDSGDPASLF*KSSGNP Trigger: GGGATTTCCAGAGCTCTTTCAGAAGAGAGAAGCTGG...GTCCCCGGAGTCTAAGGCCCTCCAGGAAGACTCACCTGGAGTGAGGCAGAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112858.8 ENSMUST00000112859.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCCTGGCAATCATAGACCTTCTGCCTCACTCCAGGTGAGTCTTCCTGGAGGGCCAGCTTCTCTCTTCTaGAAGAGCTCTGGAAATCCC | + |
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Preference number: 2 (lower is better) Translates to: IPGNHRPSASLQVSLPGGPASLF*KSSGNP Trigger: GGGATTTCCAGAGCTCTTTCAGAAGAGAGAAGCTGG...CCCTCCAGGAAGACTCACCTGGAGTGAGGCAGAAGGTCTATGATTGCCAGGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112858.8 ENSMUST00000112859.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCCTGGCAATCATAGACCTTCTGCCTCACTCCAGGTGAGTCTTCCTGGAGGGCTTCTGAAAGAGCTCTaGAAATCCCAGCTTGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: IPGNHRPSASLQVSLPGGLLKEL*KSQLED Trigger: ATCCTCAAGCTGGGATTTCCAGAGCTCTTTCAGAAG...CCCTCCAGGAAGACTCACCTGGAGTGAGGCAGAAGGTCTATGATTGCCAGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112858.8 ENSMUST00000112859.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGACTTCCACTTACCCTATaGCACTGGGTAAAACTCTTG | + |
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Preference number: 2 (lower is better) Translates to: GGEGKSQFALPKAGPSERLPLTL*HWVKLL Trigger: CAAGAGTTTTACCCAGTGTCATAGGGTAAGTGGAAG...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAAAACTCTTGATTACTaGGGGCTTTGTACTCTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: GGEGKSQFALPKAGPSERKTLDY*GLCTLN Trigger: ATTGAGAGTACAAAGCCCTCAGTAATCAAGAGTTTT...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAGCTTTGTACTCTCAATaGGTAAGAAGAACTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: GGEGKSQFALPKAGPSERALYSQ*VRRTSF Trigger: AAAGGAAGTTCTTCTTACCCATTGAGAGTACAAAGC...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAAAAACTCTTGATTACTaGGGGCTTTGTACTCTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: GEREKVSLPYQRLVLLKEKTLDY*GLCTLN Trigger: ATTGAGAGTACAAAGCCCTCAGTAATCAAGAGTTTT...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGCTTTGTACTCTCAATaGGTAAGAAGAACTTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LGEREKVSLPYQRLVLLKALYSQ*VRRTSF Trigger: AAAGGAAGTTCTTCTTACCCATTGAGAGTACAAAGC...TTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTAAAACTCTTGATTACTaGGGGCTTTGTACTCTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: GEGKSQFALPKAGPSERTKTLDY*GLCTLN Trigger: ATTGAGAGTACAAAGCCCTCAGTAATCAAGAGTTTT...AGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| 3UTR CAA 90 bp | ACATTTATTTCTCATATTCATTTGGGGGAGAGGGAAAAAGTCAGTTaGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTCCACTTACC | + |
|
Preference number: 2 (lower is better) Translates to: TFISHIHLGEREKVS*PYQRLVLLKELPLT Trigger: GGTAAGTGGAAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCCAAATGAATATGAGAAATAAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTGCTTTGTACTCTCAATaGGTAAGAAGAACTTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: EREKVSLPYQRLVLLKELALYSQ*VRRTSF Trigger: AAAGGAAGTTCTTCTTACCCATTGAGAGTACAAAGC...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| 3UTR TCA 72 bp | TTCCTGGCAATCATAGACCTTCTGCCTCACTCCAGGTaGGTCTTCCTGGAGGGCCTTAGACTCCGGGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: FLAIIDLLPHSR*VFLEGLRLRGL Trigger: AAGTCCCCGGAGTCTAAGGCCCTCCAGGAAGACTCACCTGGAGTGAGGCAGAAGGTCTATGATTGCCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112858.8 ENSMUST00000112859.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTCGTGCAGCGTTAGGCTCCCTTTCTGCCGGAAAGACTTCCCACATTCCTGGAGACTCCGGGGACTTTaGTTCCAGCTTCTCTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: LSCSVRLPFCRKDFPHSWRLRGL*FQLLSS Trigger: AGAAGAGAGAAGCTGGAACAAAAGTCCCCGGAGTCT...CCAGGAATGTGGGAAGTCTTTCCGGCAGAAAGGGAGCCTAACGCTGCACGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112858.8 |
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| 3UTR-3UTR CAA 90 bp | CACATTCCTGGCAATCATAGACCTTCTGCCTCACTCCAGGTGAGTCTTCCTGGAAGACTCCGGGGACTTTaGTTCCAGCTTCTCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: HIPGNHRPSASLQVSLPGRLRGL*FQLLSS Trigger: AGAAGAGAGAAGCTGGAACAAAAGTCCCCGGAGTCT...TCCAGGAAGACTCACCTGGAGTGAGGCAGAAGGTCTATGATTGCCAGGAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112858.8 ENSMUST00000112859.8 |
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| 3UTR-3UTR CAA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACACTGGGTAAAACTCTaGATTACTGAGGGCTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GEREKVSLPYQRLVLLKEHWVKL*ITEGFV Trigger: TACAAAGCCCTCAGTAATCAAGAGTTTTACCCAGTG...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTCACTGGGTAAAACTCTaGATTACTGAGGGCTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GEGKSQFALPKAGPSERTHWVKL*ITEGFV Trigger: TACAAAGCCCTCAGTAATCAAGAGTTTTACCCAGTG...AGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTCACTGGGTAAAACTCTaGATTACTGAGGGCTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: EREKVSLPYQRLVLLKELHWVKL*ITEGFV Trigger: TACAAAGCCCTCAGTAATCAAGAGTTTTACCCAGTG...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR TCA 90 bp | ACCTTCTGCCTCACTCCAGGTGAGTCTTCCTGGAGGGCCTTAGACTCCGGGGACTGGGCGTATCTTCCATaGCAGTCCAGCAGGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TFCLTPGESSWRALDSGDWAYLP*QSSRVA Trigger: AGCTACCCTGCTGGACTGTCATGGAAGATACGCCCA...GTCCCCGGAGTCTAAGGCCCTCCAGGAAGACTCACCTGGAGTGAGGCAGAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112858.8 ENSMUST00000112859.8 |
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| CDS-3UTR TCA 90 bp | CTCTCGTGCAGCGTTAGGCTCCCTTTCTGCCGGAAAGACTTCCCACATTCCTGGTGGGCGTATCTTCCATaGCAGTCCAGCAGGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSCSVRLPFCRKDFPHSWWAYLP*QSSRVA Trigger: AGCTACCCTGCTGGACTGTCATGGAAGATACGCCCA...CCAGGAATGTGGGAAGTCTTTCCGGCAGAAAGGGAGCCTAACGCTGCACGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112858.8 |
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| CDS-3UTR GCA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAGAGCAGCTTCGCTGGTaGACAGCCAGGCTCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGEGKSQFALPKAGPSEREQLRW*TARLPL Trigger: GAGAGGGAGCCTGGCTGTGCACCAGCGAAGCTGCTC...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR GCA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGAGCAGCTTCGCTGGTaGACAGCCAGGCTCCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: GEREKVSLPYQRLVLLKEEQLRW*TARLPL Trigger: GAGAGGGAGCCTGGCTGTGCACCAGCGAAGCTGCTC...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CCA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGTGTGGAGTCTCTCGTaGACAGCCAGGCTGCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: GEREKVSLPYQRLVLLKEVWSLS*TARLPR Trigger: GCGAGGCAGCCTGGCTGTCCACGAGAGACTCCACAC...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CCA 90 bp | TTGGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGTGTGGAGTCTCTCGTaGACAGCCAGGCTGCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: LGEREKVSLPYQRLVLLKVWSLS*TARLPR Trigger: GCGAGGCAGCCTGGCTGTCCACGAGAGACTCCACAC...TTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR TCA 90 bp | TTGGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGGTTGCCCTTGGCCCTaGAGCTTTTCCCACACTGGG | + |
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Preference number: 4 (lower is better) Translates to: LGEREKVSLPYQRLVLLKGCPWP*SFSHTG Trigger: CCCAGTGTGGGAAAAGCTTCAGGGCCAAGGGCAACC...TTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR TCA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGGTTGCCCTTGGCCCTaGAGCTTTTCCCACACTGGG | + |
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Preference number: 4 (lower is better) Translates to: GEREKVSLPYQRLVLLKEGCPWP*SFSHTG Trigger: CCCAGTGTGGGAAAAGCTTCAGGGCCAAGGGCAACC...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR TCA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGACCTGTGTGGATCCGCTaGTGTGTAACCAGGTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: GGEGKSQFALPKAGPSERPVWIR*CVTRLP Trigger: GGGCAACCTGGTTACACATCAGCGGATCCACACAGG...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR TCA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGCCAGGCTGCCTCGCTaGCTGAAGCTTTTCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: GEREKVSLPYQRLVLLKEARLPR*LKLFPH Trigger: GTGTGGGAAAAGCTTCAGTCAGCGAGGCAGCCTGGC...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR TCA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACAGAGTGAGCCGTTGTaGGCAGCTTCGCTGGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: GEREKVSLPYQRLVLLKEQSEPL*AASLVH Trigger: GTGCACCAGCGAAGCTGCTCACAACGGCTCACTCTG...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CCA 90 bp | TTGGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAATGTGAGCAGCTTCGCTaGTGCACAGCCAGGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LGEREKVSLPYQRLVLLKCEQLR*CTARLP Trigger: AGGGAGCCTGGCTGTGCACCAGCGAAGCTGCTCACA...TTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CCA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAATGTGAGCAGCTTCGCTaGTGCACAGCCAGGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: GEREKVSLPYQRLVLLKECEQLR*CTARLP Trigger: AGGGAGCCTGGCTGTGCACCAGCGAAGCTGCTCACA...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR TCA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGATGGGCGTATCTTCCATaGCAGTCCAGCAGGGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: GGEGKSQFALPKAGPSERWAYLP*QSSRVA Trigger: AGCTACCCTGCTGGACTGTCATGGAAGATACGCCCA...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR TCA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAGGATCCTGTGGCCTCTaGAGGATCATACTTGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GGEGKSQFALPKAGPSERGSCGL*RIILVG Trigger: GCCCACAAGTATGATCCTTCAGAGGCCACAGGATCC...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR TCA 90 bp | TTGGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAACCTGTGTGGATCCGCTaGTGTGTAACCAGGTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LGEREKVSLPYQRLVLLKPVWIR*CVTRLP Trigger: GGGCAACCTGGTTACACATCAGCGGATCCACACAGG...TTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR TCA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAGGCTGCCTCGCTGACTaGAGCTTTTCCCACACTCTT | + |
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Preference number: 4 (lower is better) Translates to: GGEGKSQFALPKAGPSERGCLAD*SFSHTL Trigger: AAGAGTGTGGGAAAAGCTTCAGTCAGCGAGGCAGCC...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR TCA 90 bp | GGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTGCCAGGCTGCCTCGCTaGCTGAAGCTTTTCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: GEGKSQFALPKAGPSERTARLPR*LKLFPH Trigger: GTGTGGGAAAAGCTTCAGTCAGCGAGGCAGCCTGGC...AGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR TCA 90 bp | GGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTCAGAGTGAGCCGTTGTaGGCAGCTTCGCTGGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: GEGKSQFALPKAGPSERTQSEPL*AASLVH Trigger: GTGCACCAGCGAAGCTGCTCACAACGGCTCACTCTG...AGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CCA 90 bp | CCAAAGGCTGGTCCTTCTGAAAGAACTTCCACTTACCCTATGACACTGGGTAAAGTGTGGAGTCTCTCGTaGACAGCCAGGCTGCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: PKAGPSERTSTYPMTLGKVWSLS*TARLPR Trigger: GCGAGGCAGCCTGGCTGTCCACGAGAGACTCCACAC...TTTACCCAGTGTCATAGGGTAAGTGGAAGTTCTTTCAGAAGGACCAGCCTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTGTGTGGAGTCTCTCGTaGACAGCCAGGCTGCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: EREKVSLPYQRLVLLKELVWSLS*TARLPR Trigger: GCGAGGCAGCCTGGCTGTCCACGAGAGACTCCACAC...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CCA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGACAGTTGCCCCTGGTATaGAAGCTCTTCCTGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: GGEGKSQFALPKAGPSERQLPLV*KLFLQW Trigger: CCACTGCAGGAAGAGCTTCCATACCAGGGGCAACTG...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CCA 90 bp | GGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTGTGAGCAGCTTCGCTaGTGCACAGCCAGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GEGKSQFALPKAGPSERTCEQLR*CTARLP Trigger: AGGGAGCCTGGCTGTGCACCAGCGAAGCTGCTCACA...AGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAATGGGCGTATCTTCCATaGCAGTCCAGCAGGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GEREKVSLPYQRLVLLKEWAYLP*QSSRVA Trigger: AGCTACCCTGCTGGACTGTCATGGAAGATACGCCCA...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGGATCCTGTGGCCTCTaGAGGATCATACTTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GEREKVSLPYQRLVLLKEGSCGL*RIILVG Trigger: GCCCACAAGTATGATCCTTCAGAGGCCACAGGATCC...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTGGTTGCCCTTGGCCCTaGAGCTTTTCCCACACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EREKVSLPYQRLVLLKELGCPWP*SFSHTG Trigger: CCCAGTGTGGGAAAAGCTTCAGGGCCAAGGGCAACC...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | TTGGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGGCTGCCTCGCTGACTaGAGCTTTTCCCACACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGEREKVSLPYQRLVLLKGCLAD*SFSHTL Trigger: AAGAGTGTGGGAAAAGCTTCAGTCAGCGAGGCAGCC...TTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGGCTGCCTCGCTGACTaGAGCTTTTCCCACACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GEREKVSLPYQRLVLLKEGCLAD*SFSHTL Trigger: AAGAGTGTGGGAAAAGCTTCAGTCAGCGAGGCAGCC...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGCCAGGCTCCCTCTCTaGGTGAAACTTTTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GEREKVSLPYQRLVLLKEARLPL*VKLFPH Trigger: GTGTGGGAAAAGTTTCACTCAGAGAGGGAGCCTGGC...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGCTGGTCCTTCTGAAAGAACTTCCACTTACCCTATGACACTGGGTAAACAGAGTGAGCCGTTGTaGGCAGCTTCGCTGGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PKAGPSERTSTYPMTLGKQSEPL*AASLVH Trigger: GTGCACCAGCGAAGCTGCTCACAACGGCTCACTCTG...TTTACCCAGTGTCATAGGGTAAGTGGAAGTTCTTTCAGAAGGACCAGCCTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR GCA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAGTGTGGATTCTCTCGTaGAGCGTTAGGCTCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGEGKSQFALPKAGPSERVWILS*SVRLPF Trigger: GAAAGGGAGCCTAACGCTGCACGAGAGAATCCACAC...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR GCA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAGTGTGGACTTTTCCATaGAGGAGACAGTTGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGEGKSQFALPKAGPSERVWTFP*RRQLPL Trigger: CAGGGGCAACTGTCTCCTGCATGGAAAAGTCCACAC...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAGGTGTCTCTCCCGTGTaGACTTTTCCATGCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGEGKSQFALPKAGPSERGVSPV*TFPCRR Trigger: TCTCCTGCATGGAAAAGTCCACACGGGAGAGACACC...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTTGTGAGCAGCTTCGCTaGTGCACAGCCAGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EREKVSLPYQRLVLLKELCEQLR*CTARLP Trigger: AGGGAGCCTGGCTGTGCACCAGCGAAGCTGCTCACA...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTCCTGTGTGGATCCGCTaGTGTGTAACCAGGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EREKVSLPYQRLVLLKELPVWIR*CVTRLP Trigger: GGGCAACCTGGTTACACATCAGCGGATCCACACAGG...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGCTGGTCCTTCTGAAAGAACTTCCACTTACCCTATGACACTGGGTAAACCTGTGTGGATCCGCTaGTGTGTAACCAGGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PKAGPSERTSTYPMTLGKPVWIR*CVTRLP Trigger: GGGCAACCTGGTTACACATCAGCGGATCCACACAGG...TTTACCCAGTGTCATAGGGTAAGTGGAAGTTCTTTCAGAAGGACCAGCCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTGCCAGGCTCCCTCTCTaGGTGAAACTTTTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GEGKSQFALPKAGPSERTARLPL*VKLFPH Trigger: GTGTGGGAAAAGTTTCACTCAGAGAGGGAGCCTGGC...AGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | TCTCGTGCAGCGTTAGGCTCCCTTTCTGCCGGAAAGACTTCCCACATTCCTGGCTGTCATCACATTCACTaGAAAAGGCTACATTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRAALGSLSAGKTSHIPGCHHIH*KRLHSG Trigger: CCCAGAATGTAGCCTTTTTCAGTGAATGTGATGACA...GCCAGGAATGTGGGAAGTCTTTCCGGCAGAAAGGGAGCCTAACGCTGCACGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112858.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAGTTAGGCTCCCTTTCTaGCGGAAAGACTTCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GGEGKSQFALPKAGPSERVRLPF*RKDFPH Trigger: ATGTGGGAAGTCTTTCCGGCAGAAAGGGAGCCTAAC...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGTGTGGACTTTTCCATaGAGGAGACAGTTGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEREKVSLPYQRLVLLKEVWTFP*RRQLPL Trigger: CAGGGGCAACTGTCTCCTGCATGGAAAAGTCCACAC...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTCAGTTGCCCCTGGTATaGAAGCTCTTCCTGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GEGKSQFALPKAGPSERTQLPLV*KLFLQW Trigger: CCACTGCAGGAAGAGCTTCCATACCAGGGGCAACTG...AGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR CCA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGGTGTCTCTCCCGTGTaGACTTTTCCATGCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GEREKVSLPYQRLVLLKEGVSPV*TFPCRR Trigger: TCTCCTGCATGGAAAAGTCCACACGGGAGAGACACC...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGGTGTCTCTCCCGTGTaGACTTTTCCATGCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGEREKVSLPYQRLVLLKGVSPV*TFPCRR Trigger: TCTCCTGCATGGAAAAGTCCACACGGGAGAGACACC...TTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTTGGGCGTATCTTCCATaGCAGTCCAGCAGGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EREKVSLPYQRLVLLKELWAYLP*QSSRVA Trigger: AGCTACCCTGCTGGACTGTCATGGAAGATACGCCCA...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGCTGGTCCTTCTGAAAGAACTTCCACTTACCCTATGACACTGGGTAAAGGATCCTGTGGCCTCTaGAGGATCATACTTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKAGPSERTSTYPMTLGKGSCGL*RIILVG Trigger: GCCCACAAGTATGATCCTTCAGAGGCCACAGGATCC...TTTACCCAGTGTCATAGGGTAAGTGGAAGTTCTTTCAGAAGGACCAGCCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | TTGGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAACCAGCTTCTCTCTTCTaGAAGAGCTCTGGAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGEREKVSLPYQRLVLLKPASLF*KSSGNP Trigger: GGGATTTCCAGAGCTCTTTCAGAAGAGAGAAGCTGG...TTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACCAGCTTCTCTCTTCTaGAAGAGCTCTGGAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: GEREKVSLPYQRLVLLKEPASLF*KSSGNP Trigger: GGGATTTCCAGAGCTCTTTCAGAAGAGAGAAGCTGG...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGCTGGTCCTTCTGAAAGAACTTCCACTTACCCTATGACACTGGGTAAAGGCTGCCTCGCTGACTaGAGCTTTTCCCACACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PKAGPSERTSTYPMTLGKGCLAD*SFSHTL Trigger: AAGAGTGTGGGAAAAGCTTCAGTCAGCGAGGCAGCC...TTTACCCAGTGTCATAGGGTAAGTGGAAGTTCTTTCAGAAGGACCAGCCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGCTGGTCCTTCTGAAAGAACTTCCACTTACCCTATGACACTGGGTAAAGCCAGGCTCCCTCTCTaGGTGAAACTTTTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PKAGPSERTSTYPMTLGKARLPL*VKLFPH Trigger: GTGTGGGAAAAGTTTCACTCAGAGAGGGAGCCTGGC...TTTACCCAGTGTCATAGGGTAAGTGGAAGTTCTTTCAGAAGGACCAGCCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTCATGCAGGAGACAGTTaGCCCTGGTATGGAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GEGKSQFALPKAGPSERTHAGDS*PWYGSS Trigger: AGAGCTTCCATACCAGGGGCAACTGTCTCCTGCATG...AGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGCTTGAGGATCCTGTaGCCTCTGAAGGATCATACT | + |
|
Preference number: 4 (lower is better) Translates to: GGEGKSQFALPKAGPSERSLRIL*PLKDHT Trigger: AGTATGATCCTTCAGAGGCCACAGGATCCTCAAGCT...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAAGCTCCTCTGGCAAATaGCACACTCGTAGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGEREKVSLPYQRLVLLKSSSGK*HTRRVS Trigger: AGAAACCCTACGAGTGTGCCATTTGCCAGAGGAGCT...TTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTCAGTTGCCCCTGGTATaGAAGCTCTTCCTGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EREKVSLPYQRLVLLKELQLPLV*KLFLQW Trigger: CCACTGCAGGAAGAGCTTCCATACCAGGGGCAACTG...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTGTTAGGCTCCCTTTCTaGCGGAAAGACTTCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GEGKSQFALPKAGPSERTVRLPF*RKDFPH Trigger: ATGTGGGAAGTCTTTCCGGCAGAAAGGGAGCCTAAC...AGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTGTGTGGATTCTCTCGTaGAGCGTTAGGCTCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EREKVSLPYQRLVLLKELVWILS*SVRLPF Trigger: GAAAGGGAGCCTAACGCTGCACGAGAGAATCCACAC...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTCATGCAGGAGACAGTTaGCCCTGGTATGGAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EREKVSLPYQRLVLLKELHAGDS*PWYGSS Trigger: AGAGCTTCCATACCAGGGGCAACTGTCTCCTGCATG...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTGTGTGGACTTTTCCATaGAGGAGACAGTTGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EREKVSLPYQRLVLLKELVWTFP*RRQLPL Trigger: CAGGGGCAACTGTCTCCTGCATGGAAAAGTCCACAC...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR GCA 90 bp | CCAAAGGCTGGTCCTTCTGAAAGAACTTCCACTTACCCTATGACACTGGGTAAAGTGTGGACTTTTCCATaGAGGAGACAGTTGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKAGPSERTSTYPMTLGKVWTFP*RRQLPL Trigger: CAGGGGCAACTGTCTCCTGCATGGAAAAGTCCACAC...TTTACCCAGTGTCATAGGGTAAGTGGAAGTTCTTTCAGAAGGACCAGCCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR CCA 90 bp | CCAAAGGCTGGTCCTTCTGAAAGAACTTCCACTTACCCTATGACACTGGGTAAAGGTGTCTCTCCCGTGTaGACTTTTCCATGCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKAGPSERTSTYPMTLGKGVSPV*TFPCRR Trigger: TCTCCTGCATGGAAAAGTCCACACGGGAGAGACACC...TTTACCCAGTGTCATAGGGTAAGTGGAAGTTCTTTCAGAAGGACCAGCCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGATGCACCAATATGTaGAAAAGGCTACATTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGEGKSQFALPKAGPSERRCTNM*KRLHSG Trigger: CCCAGAATGTAGCCTTTTTCACATATTGGTGCATCT...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000112860.2 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTCCAGCTTCTCTCTTCTaGAAGAGCTCTGGAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: EREKVSLPYQRLVLLKELPASLF*KSSGNP Trigger: GGGATTTCCAGAGCTCTTTCAGAAGAGAGAAGCTGG...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
||
| CDS-3UTR TCA 90 bp | CACATTCCTGGCAATCATAGACCTTCTGCCTCACTCCAGGTGAGTCTTCCTGGATGTCATCACATTCACTaGAAAAGGCTACATTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HIPGNHRPSASLQVSLPGCHHIH*KRLHSG Trigger: CCCAGAATGTAGCCTTTTTCAGTGAATGTGATGACA...TCCAGGAAGACTCACCTGGAGTGAGGCAGAAGGTCTATGATTGCCAGGAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112858.8 ENSMUST00000112859.8 |
||
| CDS-3UTR GCA 90 bp | CCAAAGGCTGGTCCTTCTGAAAGAACTTCCACTTACCCTATGACACTGGGTAAAGTTAGGCTCCCTTTCTaGCGGAAAGACTTCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PKAGPSERTSTYPMTLGKVRLPF*RKDFPH Trigger: ATGTGGGAAGTCTTTCCGGCAGAAAGGGAGCCTAAC...TTTACCCAGTGTCATAGGGTAAGTGGAAGTTCTTTCAGAAGGACCAGCCTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CCA 90 bp | GGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTAGCTTGAGGATCCTGTaGCCTCTGAAGGATCATACT | + |
|
Preference number: 4 (lower is better) Translates to: GEGKSQFALPKAGPSERTSLRIL*PLKDHT Trigger: AGTATGATCCTTCAGAGGCCACAGGATCCTCAAGCT...AGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CCA 90 bp | CCAAAGGCTGGTCCTTCTGAAAGAACTTCCACTTACCCTATGACACTGGGTAAAAGCTCCTCTGGCAAATaGCACACTCGTAGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKAGPSERTSTYPMTLGKSSSGK*HTRRVS Trigger: AGAAACCCTACGAGTGTGCCATTTGCCAGAGGAGCT...TTTACCCAGTGTCATAGGGTAAGTGGAAGTTCTTTCAGAAGGACCAGCCTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTAGCTCCTCTGGCAAATaGCACACTCGTAGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EREKVSLPYQRLVLLKELSSSGK*HTRRVS Trigger: AGAAACCCTACGAGTGTGCCATTTGCCAGAGGAGCT...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR GCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTGTGTGGACGCGGATGTaGACAATTAAGCTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EREKVSLPYQRLVLLKELVWTRM*TIKLPF Trigger: GAAAGGAAGCTTAATTGTGCACATCCGCGTCCACAC...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR GCA 90 bp | CCAAAGGCTGGTCCTTCTGAAAGAACTTCCACTTACCCTATGACACTGGGTAAAGTGTGGACGCGGATGTaGACAATTAAGCTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKAGPSERTSTYPMTLGKVWTRM*TIKLPF Trigger: GAAAGGAAGCTTAATTGTGCACATCCGCGTCCACAC...TTTACCCAGTGTCATAGGGTAAGTGGAAGTTCTTTCAGAAGGACCAGCCTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CCA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGAAGGATCATACTTGTaGGCTTCTGTCATCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: GEREKVSLPYQRLVLLKEEGSYL*ASVITS Trigger: AGATGTGATGACAGAAGCCCACAAGTATGATCCTTC...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112860.2 ENSMUST00000223041.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGGATCATACTTGTaGGCTTCTGTCATCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: LGEREKVSLPYQRLVLLKEGSYL*ASVITL Trigger: CAATGTGATGACAGAAGCCCACAAGTATGATCCTTC...TTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112861.8 ENSMUST00000164472.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTAGATGCACCAATATGTaGAAAAGGCTACATTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GEGKSQFALPKAGPSERTRCTNM*KRLHSG Trigger: CCCAGAATGTAGCCTTTTTCACATATTGGTGCATCT...AGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112860.2 ENSMUST00000223041.2 |
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| CDS-3UTR CCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTCTTCTGAAAGAGCTCTaGAAATCCCAGCTTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EREKVSLPYQRLVLLKELLLKEL*KSQLED Trigger: ATCCTCAAGCTGGGATTTCCAGAGCTCTTTCAGAAG...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CCA 90 bp | GGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTGAAGGATCATACTTGTaGGCTTCTGTCATCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGKSQFALPKAGPSERTEGSYL*ASVITL Trigger: CAATGTGATGACAGAAGCCCACAAGTATGATCCTTC...AGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112861.8 ENSMUST00000164472.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGCTGGTCCTTCTGAAAGAACTTCCACTTACCCTATGACACTGGGTAAACTTCTGTCATCACATTaGAAAAGGCTACATTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKAGPSERTSTYPMTLGKLLSSH*KRLHSG Trigger: CCCAGAATGTAGCCTTTTTCAATGTGATGACAGAAG...TTTACCCAGTGTCATAGGGTAAGTGGAAGTTCTTTCAGAAGGACCAGCCTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112861.8 ENSMUST00000164472.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTCTTCTGTCATCACATTaGAAAAGGCTACATTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EREKVSLPYQRLVLLKELLLSSH*KRLHSG Trigger: CCCAGAATGTAGCCTTTTTCAATGTGATGACAGAAG...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112861.8 ENSMUST00000164472.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTGAAGGATCATACTTGTaGGCTTCTGTCATCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: EREKVSLPYQRLVLLKELEGSYL*ASVITS Trigger: AGATGTGATGACAGAAGCCCACAAGTATGATCCTTC...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112860.2 ENSMUST00000223041.2 |
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| CDS-3UTR CAA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAGTAACCAGGTTGCCCTaGGCCCTGAAGCTTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGEGKSQFALPKAGPSERVTRLP*ALKLFP Trigger: TGGGAAAAGCTTCAGGGCCAAGGGCAACCTGGTTAC...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CAA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGTAACCAGGTTGCCCTaGGCCCTGAAGCTTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GEREKVSLPYQRLVLLKEVTRLP*ALKLFP Trigger: TGGGAAAAGCTTCAGGGCCAAGGGCAACCTGGTTAC...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CAA 90 bp | GGGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGACTCCGGGGACTTTaGTTCCAGCTTCTCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGEGKSQFALPKAGPSERRLRGL*FQLLSS Trigger: AGAAGAGAGAAGCTGGAACAAAAGTCCCCGGAGTCT...TCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CAA 90 bp | GGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTGTAACCAGGTTGCCCTaGGCCCTGAAGCTTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GEGKSQFALPKAGPSERTVTRLP*ALKLFP Trigger: TGGGAAAAGCTTCAGGGCCAAGGGCAACCTGGTTAC...AGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CAA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAAGACTCCGGGGACTTTaGTTCCAGCTTCTCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GEREKVSLPYQRLVLLKERLRGL*FQLLSS Trigger: AGAAGAGAGAAGCTGGAACAAAAGTCCCCGGAGTCT...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS TCA 90 bp | CTGTGGCCTCTGAAGGATCATACTTGTGGGCTTCTGTCATCACATTaGAAAAGGCTACATTCTGGGCGTATCTTCCATGACAGTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LWPLKDHTCGLLSSH*KRLHSGRIFHDSPA Trigger: TGCTGGACTGTCATGGAAGATACGCCCAGAATGTAGCCTTTTTCAATGTGATGACAGAAGCCCACAAGTATGATCCTTCAGAGGCCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000112861.8 ENSMUST00000134526.8 ENSMUST00000136889.8 ENSMUST00000164472.8 |
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| CDS CCA 90 bp | AAATCCCAGCTTGAGGATCCTGTGGCCTCTGAAGGATCATACTTGTaGGCTTCTGTCATCACATCTGGTAAAACGAGAGGGAAGTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: KSQLEDPVASEGSYL*ASVITSGKTRGKSC Trigger: ACATGACTTCCCTCTCGTTTTACCAGATGTGATGACAGAAGCCCACAAGTATGATCCTTCAGAGGCCACAGGATCCTCAAGCTGGGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112860.2 ENSMUST00000137224.8 ENSMUST00000223041.2 |
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| CDS-3UTR CAA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTAGACTCCGGGGACTTTaGTTCCAGCTTCTCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EREKVSLPYQRLVLLKELRLRGL*FQLLSS Trigger: AGAAGAGAGAAGCTGGAACAAAAGTCCCCGGAGTCT...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS CCA 90 bp | AAATCCCAGCTTGAGGATCCTGTGGCCTCTGAAGGATCATACTTGTaGGCTTCTGTCATCACATTGAAAAAGGCTACATTCTGGGCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KSQLEDPVASEGSYL*ASVITLKKATFWAY Trigger: ATACGCCCAGAATGTAGCCTTTTTCAATGTGATGACAGAAGCCCACAAGTATGATCCTTCAGAGGCCACAGGATCCTCAAGCTGGGATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112861.8 ENSMUST00000134526.8 ENSMUST00000136889.8 ENSMUST00000164472.8 |
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| CDS-3UTR CAA 90 bp | GGGGAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAAGCTTCTGTCATCACATaGAAAAAGGCTACATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GEREKVSLPYQRLVLLKEASVIT*KKATFW Trigger: CCAGAATGTAGCCTTTTTCAATGTGATGACAGAAGC...TTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000112861.8 ENSMUST00000164472.8 |
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| CDS-3UTR CAA 90 bp | GAGAGGGAAAAAGTCAGTTTGCCCTACCAAAGGCTGGTCCTTCTGAAAGAACTTTCTGAAGGATCATACTaGTGGGCTTCTGTCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: EREKVSLPYQRLVLLKELSEGSY*WASVIT Trigger: TGTGATGACAGAAGCCCACAAGTATGATCCTTCAGA...AAGTTCTTTCAGAAGGACCAGCCTTTGGTAGGGCAAACTGACTTTTTCCCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS-3UTR CAA 90 bp | CCAAAGGCTGGTCCTTCTGAAAGAACTTCCACTTACCCTATGACACTGGGTAAATCTGAAGGATCATACTaGTGGGCTTCTGTCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: PKAGPSERTSTYPMTLGKSEGSY*WASVIT Trigger: TGTGATGACAGAAGCCCACAAGTATGATCCTTCAGA...TTTACCCAGTGTCATAGGGTAAGTGGAAGTTCTTTCAGAAGGACCAGCCTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS GCA 72 bp | GCAGGAGACAGTTGCCCCTGGTATGGAAGCTCTTCCTaGAGTGGGAACACGCGTAGGGCTTCAGACCCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: AGDSCPWYGSSS*SGNTRRASDPC Trigger: ACACGGGTCTGAAGCCCTACGCGTGTTCCCACTGCAGGAAGAGCTTCCATACCAGGGGCAACTGTCTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS CCA 72 bp | CCGTGTGGACTTTTCCATGCAGGAGACAGTTGCCCCTaGTATGGAAGCTCTTCCTGCAGTGGGAACACGCGT | + |
|
Preference number: 6 (lower is better) Translates to: PCGLFHAGDSCP*YGSSSCSGNTR Trigger: ACGCGTGTTCCCACTGCAGGAAGAGCTTCCATACCAGGGGCAACTGTCTCCTGCATGGAAAAGTCCACACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS CAA 72 bp | ACCGCTGTGAACTCTTCGGTGCACGGCGAGGTTACTTaGATTTCGGAAGCTCCTCTGGCAAATGGCACACTC | + |
|
Preference number: 6 (lower is better) Translates to: TAVNSSVHGEVT*ISEAPLANGTL Trigger: GAGTGTGCCATTTGCCAGAGGAGCTTCCGAAATCAAAGTAACCTCGCCGTGCACCGAAGAGTTCACAGCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000112860.2 ENSMUST00000112861.8 ENSMUST00000137224.8 ENSMUST00000164472.8 ENSMUST00000223041.2 |
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| CDS CCA 72 bp | CTTGAGGATCCTGTGGCCTCTGAAGGATCATACTTGTaGGCTTCTGTCATCACATCTGGTAAAACGAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LEDPVASEGSYL*ASVITSGKTRG Trigger: CCCTCTCGTTTTACCAGATGTGATGACAGAAGCCCACAAGTATGATCCTTCAGAGGCCACAGGATCCTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112860.2 ENSMUST00000137224.8 ENSMUST00000223041.2 |
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| CDS CAA 90 bp | TGGAAATCCCAGCTTGAGGATCCTGTGGCCTCTGAAGGATCATACTaGTGGGCTTCTGTCATCACATCTGGTAAAACGAGAGGGAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: WKSQLEDPVASEGSY*WASVITSGKTRGKS Trigger: TGACTTCCCTCTCGTTTTACCAGATGTGATGACAGAAGCCCACAAGTATGATCCTTCAGAGGCCACAGGATCCTCAAGCTGGGATTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112860.2 ENSMUST00000137224.8 ENSMUST00000223041.2 |
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| CDS CAA 90 bp | TGGAAATCCCAGCTTGAGGATCCTGTGGCCTCTGAAGGATCATACTaGTGGGCTTCTGTCATCACATTGAAAAAGGCTACATTCTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: WKSQLEDPVASEGSY*WASVITLKKATFWA Trigger: CGCCCAGAATGTAGCCTTTTTCAATGTGATGACAGAAGCCCACAAGTATGATCCTTCAGAGGCCACAGGATCCTCAAGCTGGGATTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112861.8 ENSMUST00000134526.8 ENSMUST00000136889.8 ENSMUST00000164472.8 |
||
| CDS CAA 72 bp | CAGCTTGAGGATCCTGTGGCCTCTGAAGGATCATACTaGTGGGCTTCTGTCATCACATTGAAAAAGGCTACA | + |
|
Preference number: 6 (lower is better) Translates to: QLEDPVASEGSY*WASVITLKKAT Trigger: TGTAGCCTTTTTCAATGTGATGACAGAAGCCCACAAGTATGATCCTTCAGAGGCCACAGGATCCTCAAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112861.8 ENSMUST00000134526.8 ENSMUST00000136889.8 ENSMUST00000164472.8 |
||
| CDS CCA 72 bp | CTTGAGGATCCTGTGGCCTCTGAAGGATCATACTTGTaGGCTTCTGTCATCACATTGAAAAAGGCTACATTC | + |
|
Preference number: 6 (lower is better) Translates to: LEDPVASEGSYL*ASVITLKKATF Trigger: GAATGTAGCCTTTTTCAATGTGATGACAGAAGCCCACAAGTATGATCCTTCAGAGGCCACAGGATCCTCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112861.8 ENSMUST00000134526.8 ENSMUST00000136889.8 ENSMUST00000164472.8 |
||
| CDS TCA 72 bp | CTGAAGGATCATACTTGTGGGCTTCTGTCATCACATTaGAAAAGGCTACATTCTGGGCGTATCTTCCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: LKDHTCGLLSSH*KRLHSGRIFHD Trigger: GTCATGGAAGATACGCCCAGAATGTAGCCTTTTTCAATGTGATGACAGAAGCCCACAAGTATGATCCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000112861.8 ENSMUST00000134526.8 ENSMUST00000136889.8 ENSMUST00000164472.8 |
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