Pregenerated sensors for ZFP628 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074406Ensembl transcript IDs: ENSMUST00000116354.4
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGCCTGGAGTGGCAGGTGGGGGCTGTGGTAGGGCGGAGTCAGCCTaGGGCAGCTCGGCAGGCACATCCTGGGACTGGGTGGCTACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGVAGGGCGRAESA*GSSAGTSWDWVATG Trigger: CCCTGTAGCCACCCAGTCCCAGGATGTGCCTGCCGAGCTGCCCCAGGCTGACTCCGCCCTACCACAGCCCCCACCTGCCACTCCAGGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 90 bp | GGCACATCCTGGGACTGGGTGGCTACAGGGGGCCCCGGGCATGGCTaGTGCTCCAGGAGGAGCTCCTCGCTGCTGAAGCCCTGCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTSWDWVATGGPGHG*CSRRSSSLLKPCSQ Trigger: CTGCGAGCAGGGCTTCAGCAGCGAGGAGCTCCTCCTGGAGCACCAGCCATGCCCGGGGCCCCCTGTAGCCACCCAGTCCCAGGATGTGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS GCA 90 bp | ACATCCTGGGACTGGGTGGCTACAGGGGGCCCCGGGCATGGCTGGTaGTCCAGGAGGAGCTCCTCGCTGCTGAAGCCCTGCTCGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSWDWVATGGPGHGW*SRRSSSLLKPCSQP Trigger: TGGCTGCGAGCAGGGCTTCAGCAGCGAGGAGCTCCTCCTGGAGCACCAGCCATGCCCGGGGCCCCCTGTAGCCACCCAGTCCCAGGATGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 90 bp | GTGGGAAGGCACCATCACAGCTGCCACAGCGAAAGGCCTGTCCACTaGCCGCACCATGGCTGTGCTGGTGACGGGACAGGCCAGCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: VGRHHHSCHSERPVH*PHHGCAGDGTGQPP Trigger: CGGTGGCTGGCCTGTCCCGTCACCAGCACAGCCATGGTGCGGCCAGTGGACAGGCCTTTCGCTGTGGCAGCTGTGATGGTGCCTTCCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 90 bp | GGGGCTGCGATGCTACAGCAGAGCCGGTGGTGCCCGAAGTTGTGGTaGCTGGGGTGTGCGTCCTCAGATGCCGCTGCAGGTAGGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GAAMLQQSRWCPKLW*LGCASSDAAAGRQP Trigger: TGGCTGCCTACCTGCAGCGGCATCTGAGGACGCACACCCCAGCCACCACAACTTCGGGCACCACCGGCTCTGCTGTAGCATCGCAGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 90 bp | CAGGGGGCTGCGATGCTACAGCAGAGCCGGTGGTGCCCGAAGTTGTaGTGGCTGGGGTGTGCGTCCTCAGATGCCGCTGCAGGTAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QGAAMLQQSRWCPKL*WLGCASSDAAAGRQ Trigger: CTGCCTACCTGCAGCGGCATCTGAGGACGCACACCCCAGCCACCACAACTTCGGGCACCACCGGCTCTGCTGTAGCATCGCAGCCCCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS TCA 90 bp | CCACAGCGAAAGGCCTGTCCACTGGCCGCACCATGGCTGTGCTGGTaGCGGGACAGGCCAGCCACCGTCCGGAAGGACTTCCCACAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PQRKACPLAAPWLCW*RDRPATVRKDFPQG Trigger: TCCTTGTGGGAAGTCCTTCCGGACGGTGGCTGGCCTGTCCCGTCACCAGCACAGCCATGGTGCGGCCAGTGGACAGGCCTTTCGCTGTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 90 bp | CGGCTGCCGCCTCCTCCACGTGACACTGCTGGTGAGCCAAGAGGCTaGCCAGTTGTGGGAAGGCACCATCACAGCTGCCACAGCGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLPPPPRDTAGEPRG*PVVGRHHHSCHSER Trigger: CCTTTCGCTGTGGCAGCTGTGATGGTGCCTTCCCACAACTGGCCAGCCTCTTGGCTCACCAGCAGTGTCACGTGGAGGAGGCGGCAGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 90 bp | CTGCGATGCTACAGCAGAGCCGGTGGTGCCCGAAGTTGTGGTGGCTaGGGTGTGCGTCCTCAGATGCCGCTGCAGGTAGGCAGCCATAAC | + |
|
Preference number: 5 (lower is better) Translates to: LRCYSRAGGARSCGG*GVRPQMPLQVGSHN Trigger: GTTATGGCTGCCTACCTGCAGCGGCATCTGAGGACGCACACCCCAGCCACCACAACTTCGGGCACCACCGGCTCTGCTGTAGCATCGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS TCA 90 bp | GGAATCAGCTGGAGGCCCTGGGCAGTCTGTACCAGGAGAAATGTTTaGGAACTGGGAGCAGCCGGGCCTGGGGGCGTAGGCTGGGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GISWRPWAVCTRRNV*ELGAAGPGGVGWAV Trigger: AACAGCCCAGCCTACGCCCCCAGGCCCGGCTGCTCCCAGTTCTCAAACATTTCTCCTGGTACAGACTGCCCAGGGCCTCCAGCTGATTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 90 bp | TACGTGAACATCTTGAGCAGCCAGTGGAGTTGGAGCTGCAGCCAATaGGGCAGGGGGCTGCGATGCTACAGCAGAGCCGGTGGTGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: YVNILSSQWSWSCSQ*GRGLRCYSRAGGAR Trigger: TCGGGCACCACCGGCTCTGCTGTAGCATCGCAGCCCCCTGCCCCATTGGCTGCAGCTCCAACTCCACTGGCTGCTCAAGATGTTCACGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 90 bp | CTCCTCCACGTGACACTGCTGGTGAGCCAAGAGGCTGGCCAGTTGTaGGAAGGCACCATCACAGCTGCCACAGCGAAAGGCCTGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LLHVTLLVSQEAGQL*EGTITAATAKGLST Trigger: AGTGGACAGGCCTTTCGCTGTGGCAGCTGTGATGGTGCCTTCCCACAACTGGCCAGCCTCTTGGCTCACCAGCAGTGTCACGTGGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 90 bp | TGGACTGCAGGAAGAGTCTGCACAATCTGGATGGAGGGCAAGTTCTaGGGAGCCATGACCCCTGGTCCAGCCACTGCGGGGACCACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: WTAGRVCTIWMEGKF*GAMTPGPATAGTTC Trigger: ACAAGTGGTCCCCGCAGTGGCTGGACCAGGGGTCATGGCTCCCCAGAACTTGCCCTCCATCCAGATTGTGCAGACTCTTCCTGCAGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 90 bp | GGTCAGCAACTCTTCAGTTGCCCCACTCTGAACCAGCAGCAGGTTTaGAGCTTCTGTAGTGCCAGCTCCTCCATTAGAATTGGAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GQQLFSCPTLNQQQV*SFCSASSSIRIGDL Trigger: CAAGTCTCCAATTCTAATGGAGGAGCTGGCACTACAGAAGCTCCAAACCTGCTGCTGGTTCAGAGTGGGGCAACTGAAGAGTTGCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 72 bp | GTGGCAGGTGGGGGCTGTGGTAGGGCGGAGTCAGCCTaGGGCAGCTCGGCAGGCACATCCTGGGACTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VAGGGCGRAESA*GSSAGTSWDWV Trigger: CACCCAGTCCCAGGATGTGCCTGCCGAGCTGCCCCAGGCTGACTCCGCCCTACCACAGCCCCCACCTGCCAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 72 bp | GGGACAGGTGACCTCCGCAACCTCAGCCTGGGGAGGTaGGCGTCCGGCTGCCGCCTCCTCCACGTGACACTG | + |
|
Preference number: 6 (lower is better) Translates to: GTGDLRNLSLGR*ASGCRLLHVTL Trigger: CAGTGTCACGTGGAGGAGGCGGCAGCCGGACGCCCACCTCCCCAGGCTGAGGTTGCGGAGGTCACCTGTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS GCA 72 bp | CTCCGCAACCTCAGCCTGGGGAGGTGGGCGTCCGGCTaGCGCCTCCTCCACGTGACACTGCTGGTGAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LRNLSLGRWASG*RLLHVTLLVSQ Trigger: TTGGCTCACCAGCAGTGTCACGTGGAGGAGGCGGCAGCCGGACGCCCACCTCCCCAGGCTGAGGTTGCGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 72 bp | GCGCAGTGGGCCCTGGCTTTTCCCCAGTTCCCTCGGTaGTGGAAGCTGGCGCCATGTCCACGTGGGAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: AQWALAFPQFPR*WKLAPCPRGSR Trigger: CCGGCTCCCACGTGGACATGGCGCCAGCTTCCACCACCGAGGGAACTGGGGAAAAGCCAGGGCCCACTGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CAA 90 bp | GGGCAGGGGGCTGCGATGCTACAGCAGAGCCGGTGGTGCCCGAAGTaGTGGTGGCTGGGGTGTGCGTCCTCAGATGCCGCTGCAGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GQGAAMLQQSRWCPK*WWLGCASSDAAAGR Trigger: CCTACCTGCAGCGGCATCTGAGGACGCACACCCCAGCCACCACAACTTCGGGCACCACCGGCTCTGCTGTAGCATCGCAGCCCCCTGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS GCA 72 bp | GGGCAGGGGGCTGCGATGCTACAGCAGAGCCGGTGGTaGCCGAAGTTGTGGTGGCTGGGGTGTGCGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GQGAAMLQQSRW*PKLWWLGCASS Trigger: TGAGGACGCACACCCCAGCCACCACAACTTCGGGCACCACCGGCTCTGCTGTAGCATCGCAGCCCCCTGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS TCA 72 bp | AAGGCCTGTCCACTGGCCGCACCATGGCTGTGCTGGTaGCGGGACAGGCCAGCCACCGTCCGGAAGGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: KACPLAAPWLCW*RDRPATVRKDF Trigger: GAAGTCCTTCCGGACGGTGGCTGGCCTGTCCCGTCACCAGCACAGCCATGGTGCGGCCAGTGGACAGGCCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS GCA 72 bp | TCCCAACAGACCGAGGGCCTGGCCTTGCAGCACCACTaGCCGGACCTCCAGCACTGGCAGGAGGCAGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SQQTEGLALQHH*PDLQHWQEAAE Trigger: TTCTGCTGCCTCCTGCCAGTGCTGGAGGTCCGGGCAGTGGTGCTGCAAGGCCAGGCCCTCGGTCTGTTGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 72 bp | CACCATCACAGCTGCCACAGCGAAAGGCCTGTCCACTaGCCGCACCATGGCTGTGCTGGTGACGGGACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HHHSCHSERPVH*PHHGCAGDGTG Trigger: GCCTGTCCCGTCACCAGCACAGCCATGGTGCGGCCAGTGGACAGGCCTTTCGCTGTGGCAGCTGTGATGGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 72 bp | TACAGCAGAGCCGGTGGTGCCCGAAGTTGTGGTGGCTaGGGTGTGCGTCCTCAGATGCCGCTGCAGGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: YSRAGGARSCGG*GVRPQMPLQVG Trigger: GCCTACCTGCAGCGGCATCTGAGGACGCACACCCCAGCCACCACAACTTCGGGCACCACCGGCTCTGCTGTA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 72 bp | GCGATGCTACAGCAGAGCCGGTGGTGCCCGAAGTTGTaGTGGCTGGGGTGTGCGTCCTCAGATGCCGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AMLQQSRWCPKL*WLGCASSDAAA Trigger: TGCAGCGGCATCTGAGGACGCACACCCCAGCCACCACAACTTCGGGCACCACCGGCTCTGCTGTAGCATCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CAA 72 bp | GCTGCGATGCTACAGCAGAGCCGGTGGTGCCCGAAGTaGTGGTGGCTGGGGTGTGCGTCCTCAGATGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAMLQQSRWCPK*WWLGCASSDAA Trigger: AGCGGCATCTGAGGACGCACACCCCAGCCACCACAACTTCGGGCACCACCGGCTCTGCTGTAGCATCGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS TCA 72 bp | TGGAGGCCCTGGGCAGTCTGTACCAGGAGAAATGTTTaGGAACTGGGAGCAGCCGGGCCTGGGGGCGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: WRPWAVCTRRNV*ELGAAGPGGVG Trigger: GCCTACGCCCCCAGGCCCGGCTGCTCCCAGTTCTCAAACATTTCTCCTGGTACAGACTGCCCAGGGCCTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 72 bp | ATGCTACAGCAGAGCCGGTGGTGCCCGAAGTTGTGGTaGCTGGGGTGTGCGTCCTCAGATGCCGCTGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: MLQQSRWCPKLW*LGCASSDAAAG Trigger: ACCTGCAGCGGCATCTGAGGACGCACACCCCAGCCACCACAACTTCGGGCACCACCGGCTCTGCTGTAGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CAA 72 bp | CTGGAGGCCCTGGGCAGTCTGTACCAGGAGAAATGTTaGAGAACTGGGAGCAGCCGGGCCTGGGGGCGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LEALGSLYQEKC*RTGSSRAWGRR Trigger: CCTACGCCCCCAGGCCCGGCTGCTCCCAGTTCTCAAACATTTCTCCTGGTACAGACTGCCCAGGGCCTCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CAA 90 bp | CGCCTCCTCCACGTGACACTGCTGGTGAGCCAAGAGGCTGGCCAGTaGTGGGAAGGCACCATCACAGCTGCCACAGCGAAAGGCCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLLHVTLLVSQEAGQ*WEGTITAATAKGLS Trigger: GGACAGGCCTTTCGCTGTGGCAGCTGTGATGGTGCCTTCCCACAACTGGCCAGCCTCTTGGCTCACCAGCAGTGTCACGTGGAGGAGGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CAA 90 bp | TGGAATCAGCTGGAGGCCCTGGGCAGTCTGTACCAGGAGAAATGTTaGAGAACTGGGAGCAGCCGGGCCTGGGGGCGTAGGCTGGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: WNQLEALGSLYQEKC*RTGSSRAWGRRLGC Trigger: ACAGCCCAGCCTACGCCCCCAGGCCCGGCTGCTCCCAGTTCTCAAACATTTCTCCTGGTACAGACTGCCCAGGGCCTCCAGCTGATTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 72 bp | CCTCCTCCACGTGACACTGCTGGTGAGCCAAGAGGCTaGCCAGTTGTGGGAAGGCACCATCACAGCTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PPPRDTAGEPRG*PVVGRHHHSCH Trigger: GTGGCAGCTGTGATGGTGCCTTCCCACAACTGGCCAGCCTCTTGGCTCACCAGCAGTGTCACGTGGAGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 72 bp | CAGGAGAAATGTTTGAGAACTGGGAGCAGCCGGGCCTaGGGGCGTAGGCTGGGCTGTTCCCCCAGCTACTTC | + |
|
Preference number: 6 (lower is better) Translates to: QEKCLRTGSSRA*GRRLGCSPSYF Trigger: GAAGTAGCTGGGGGAACAGCCCAGCCTACGCCCCCAGGCCCGGCTGCTCCCAGTTCTCAAACATTTCTCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 72 bp | GGAAGAGTCTGCACAATCTGGATGGAGGGCAAGTTCTaGGGAGCCATGACCCCTGGTCCAGCCACTGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRVCTIWMEGKF*GAMTPGPATAG Trigger: CCCCGCAGTGGCTGGACCAGGGGTCATGGCTCCCCAGAACTTGCCCTCCATCCAGATTGTGCAGACTCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CAA 72 bp | CTTCCCCGGGCCCAGGGCCGGTCAGCAACTCTTCAGTaGCCCCACTCTGAACCAGCAGCAGGTTTGGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LPRAQGRSATLQ*PHSEPAAGLEL Trigger: AAGCTCCAAACCTGCTGCTGGTTCAGAGTGGGGCAACTGAAGAGTTGCTGACCGGCCCTGGGCCCGGGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS GCA 72 bp | GAAAGCGTTTCCACCTCCTGCACGCAGAGCCTAGTCTaGTCACCATCCGCCCCACTCAGCACCAGCACACTC | + |
|
Preference number: 6 (lower is better) Translates to: ESVSTSCTQSLV*SPSAPLSTSTL Trigger: GAGTGTGCTGGTGCTGAGTGGGGCGGATGGTGAGCAGACTAGGCTCTGCGTGCAGGAGGTGGAAACGCTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CAA 72 bp | CCGGGCCAGGTGCTGACGGGGCCAGGAGTTGCAGTGTaGTGGTGCCTCCTGCAACGCTGCTATTTTCTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGQVLTGPGVAV*WCLLQRCYFLA Trigger: TGCTAGAAAATAGCAGCGTTGCAGGAGGCACCACAACACTGCAACTCCTGGCCCCGTCAGCACCTGGCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS GCA 72 bp | TACGTGAACATCTTGAGCAGCCAGTGGAGTTGGAGCTaGAGCCAATGGGGCAGGGGGCTGCGATGCTACAGC | + |
|
Preference number: 6 (lower is better) Translates to: YVNILSSQWSWS*SQWGRGLRCYS Trigger: GCTGTAGCATCGCAGCCCCCTGCCCCATTGGCTGCAGCTCCAACTCCACTGGCTGCTCAAGATGTTCACGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS TCA 72 bp | CCAGGGCCGGTCAGCAACTCTTCAGTTGCCCCACTCTaGACCAGCAGCAGGTTTGGAGCTTCTGTAGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PGPVSNSSVAPL*TSSRFGASVVP Trigger: TGGCACTACAGAAGCTCCAAACCTGCTGCTGGTTCAGAGTGGGGCAACTGAAGAGTTGCTGACCGGCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 72 bp | GGCCAGGTGCTGACGGGGCCAGGAGTTGCAGTGTTGTaGTGCCTCCTGCAACGCTGCTATTTTCTAGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: GQVLTGPGVAVL*CLLQRCYFLAD Trigger: ATCTGCTAGAAAATAGCAGCGTTGCAGGAGGCACCACAACACTGCAACTCCTGGCCCCGTCAGCACCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CAA 90 bp | AGCAGCAGGTTTGGAGCTTCTGTAGTGCCAGCTCCTCCATTAGAATaGGAGACTTGGCCTGTCAGGGGCTGGAGCTGGACCGTAGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: SSRFGASVVPAPPLE*ETWPVRGWSWTVVT Trigger: GGTGACTACGGTCCAGCTCCAGCCCCTGACAGGCCAAGTCTCCAATTCTAATGGAGGAGCTGGCACTACAGAAGCTCCAAACCTGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS GCA 72 bp | CAGGTGCTGACGGGGCCAGGAGTTGCAGTGTTGTGGTaGCTCCTGCAACGCTGCTATTTTCTAGCAGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: QVLTGPGVAVLW*LLQRCYFLADQ Trigger: CTGATCTGCTAGAAAATAGCAGCGTTGCAGGAGGCACCACAACACTGCAACTCCTGGCCCCGTCAGCACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 72 bp | GGAGGAGTAGGGGATTGGACACTGCTTGGAATCAGCTaGAGGCCCTGGGCAGTCTGTACCAGGAGAAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: GGVGDWTLLGIS*RPWAVCTRRNV Trigger: AACATTTCTCCTGGTACAGACTGCCCAGGGCCTCCAGCTGATTCCAAGCAGTGTCCAATCCCCTACTCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 72 bp | TGTACCAGTTGGACTGCAGGAAGAGTCTGCACAATCTaGATGGAGGGCAAGTTCTGGGGAGCCATGACCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CTSWTAGRVCTI*MEGKFWGAMTP Trigger: AGGGGTCATGGCTCCCCAGAACTTGCCCTCCATCCAGATTGTGCAGACTCTTCCTGCAGTCCAACTGGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CAA 72 bp | TTCTGTAGTGCCAGCTCCTCCATTAGAATTGGAGACTaGGCCTGTCAGGGGCTGGAGCTGGACCGTAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: FCSASSSIRIGD*ACQGLELDRSH Trigger: GTGACTACGGTCCAGCTCCAGCCCCTGACAGGCCAAGTCTCCAATTCTAATGGAGGAGCTGGCACTACAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||
| CDS CCA 72 bp | CTCTTCAGTTGCCCCACTCTGAACCAGCAGCAGGTTTaGAGCTTCTGTAGTGCCAGCTCCTCCATTAGAATT | + |
|
Preference number: 6 (lower is better) Translates to: LFSCPTLNQQQV*SFCSASSSIRI Trigger: AATTCTAATGGAGGAGCTGGCACTACAGAAGCTCCAAACCTGCTGCTGGTTCAGAGTGGGGCAACTGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116354.4 |
||