RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP626 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030604

Ensembl transcript IDs: ENSMUST00000080175.7, ENSMUST00000205671.2

Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTaGCCCCCTCTTCTGGAGTGTTTGAAGACAGCTACAGTGTACTTA +
Preference number: 1 (lower is better)
Translates to: IPATTWWLTTIRNEI*PPLLECLKTATVYL
Trigger: TAAGTACACTGTAGCTGTCTTCAAACACTCCAGAAGAGGGGGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR TCA 90 bp CATCCTGAATATCACCACCTTCAGTCCCCCAAACTTCCTAAGCCTTaGGTCACCCTAGGTAAAACTGATCTGCTTCCTAATAGCTGGTCC +
Preference number: 1 (lower is better)
Translates to: HPEYHHLQSPKLPKP*VTLGKTDLLPNSWS
Trigger: GGACCAGCTATTAGGAAGCAGATCAGTTTTACCTAGGGTGACTCAAGGCTTAGGAAGTTTGGGGGACTGAAGGTGGTGATATTCAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR TCA 90 bp AACAACCAGCTTACTTCATTCTCACTCTATTTTATTGTATGTATGTaGGTACACTTGTCGCTGTCATCAGACACATCAGAAGAGGGCATC +
Preference number: 1 (lower is better)
Translates to: NNQLTSFSLYFIVCM*VHLSLSSDTSEEGI
Trigger: GATGCCCTCTTCTGATGTGTCTGATGACAGCGACAAGTGTACTCACATACATACAATAAAATAGAGTGAGAATGAAGTAAGCTGGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR CCA 90 bp CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTaGCTGGTCCTGTGTTGCCCACTAACAAATTATGCAAAAACTAAG +
Preference number: 1 (lower is better)
Translates to: PSRILISIIILLTQL*LVLCCPLTNYAKTK
Trigger: CTTAGTTTTTGCATAATTTGTTAGTGGGCAACACAGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR TCA 90 bp CTGAACGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGAAACTTCCTAAGCCTTaGGTCACCCTAGGTAAAACT +
Preference number: 2 (lower is better)
Translates to: LNVRSSNPSNHMVAHNHPKLPKP*VTLGKT
Trigger: AGTTTTACCTAGGGTGACTCAAGGCTTAGGAAGTTT...CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCGGACGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR TCA 90 bp CATCAGACACATCAGAAGAGGGCATCGGATCCCATTACAGATGCTTGTGAGCCAAAGAAAGGCTTTTCCTaGGTCTTCCCAATCACTGGG +
Preference number: 2 (lower is better)
Translates to: HQTHQKRASDPITDACEPKKGFS*VFPITG
Trigger: CCCAGTGATTGGGAAGACTCAGGAAAAGCCTTTCTT...TGGCTCACAAGCATCTGTAATGGGATCCGATGCCCTCTTCTGATGTGTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR GCA 90 bp CTGAACGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTTTATGATGAAGGCCTaGGCTGCAATTGAAGGTCTT +
Preference number: 2 (lower is better)
Translates to: LNVRSSNPSNHMVAHNHPFMMKA*AAIEGL
Trigger: AAGACCTTCAATTGCAGCGCAGGCCTTCATCATAAA...CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCGGACGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR CAA 90 bp GATCCCATTACAGATGCTTGTGAGCCACCATGTGGTTACTGGGAATaGAACATTAGGACTTCTGAAAGAGCAGTCAGTGCTCTTAACCAC +
Preference number: 2 (lower is better)
Translates to: DPITDACEPPCGYWE*NIRTSERAVSALNH
Trigger: GTGGTTAAGAGCACTGACTGCTCTTTCAGAAGTCCTAATGTTCAATTCCCAGTAACCACATGGTGGCTCACAAGCATCTGTAATGGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR TCA 90 bp AAGAGCCATGTGATGTTAATGGTGACAACAAAGACATCTCAGATAAACCTAGTTGACCATTCTGGCCTATaGCAAGGGGAGGGAGTCCCA +
Preference number: 2 (lower is better)
Translates to: KSHVMLMVTTKTSQINLVDHSGL*QGEGVP
Trigger: TGGGACTCCCTCCCCTTGTCATAGGCCAGAATGGTC...AACTAGGTTTATCTGAGATGTCTTTGTTGTCACCATTAACATCACATGGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR TCA 90 bp AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGACAGCCAGCCCTATGTTaGACAAGGCTGGAAGCAAGC +
Preference number: 2 (lower is better)
Translates to: SFYLNRQFNRSQDKQITRQPALC*TRLEAS
Trigger: GCTTGCTTCCAGCCTTGTTCAACATAGGGCTGGCTG...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR TCA 90 bp CATCAGACACATCAGAAGAGGGCATCGGATCCCATTACAGATGCTTGTGAGCCAGTGGTTACTGGGAATTaGACATTAGGACTTCTGAAA +
Preference number: 2 (lower is better)
Translates to: HQTHQKRASDPITDACEPVVTGN*TLGLLK
Trigger: TTTCAGAAGTCCTAATGTTCAATTCCCAGTAACCAC...TGGCTCACAAGCATCTGTAATGGGATCCGATGCCCTCTTCTGATGTGTCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR CCA 90 bp AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGAGGTGAGATGGCTCAGTaGGTAAGAGCACCTGACTGC +
Preference number: 2 (lower is better)
Translates to: SFYLNRQFNRSQDKQITRGEMAQ*VRAPDC
Trigger: GCAGTCAGGTGCTCTTACCCACTGAGCCATCTCACC...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR TCA 90 bp AAGAAATTGATAATGAGAGTGGAAAGATTCCCCACATGCCTTACATCAAAAGGGGGCTGGAAGCAAGCTTaGAGGACTTCCCACATACCT +
Preference number: 2 (lower is better)
Translates to: KKLIMRVERFPTCLTSKGGWKQA*RTSHIP
Trigger: AGGTATGTGGGAAGTCCTTCAAGCTTGCTTCCAGCC...CCCTTTTGATGTAAGGCATGTGGGGAATCTTTCCACTCTCATTATCAATTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR CCA 90 bp CTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCCTGATAGCCTCTGGGCTTaGCACACTATGAGACACCCT +
Preference number: 2 (lower is better)
Translates to: LKDFDIYYNPLDTTLAGPDSLWA*HTMRHP
Trigger: AGGGTGTCTCATAGTGTGCCAAGCCCAGAGGCTATC...AGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR TCA 90 bp GGACTCACAATTCAAATCCTTTCATGTTCCTTTTCATCCATTAGATGTATCCAGGAAGAGATGCTCCTCTaGCTGCCTGGGGAATTCAAT +
Preference number: 2 (lower is better)
Translates to: GLTIQILSCSFSSIRCIQEEMLL*LPGEFN
Trigger: ATTGAATTCCCCAGGCAGTCAGAGGAGCATCTCTTC...CTGGATACATCTAATGGATGAAAAGGAACATGAAAGGATTTGAATTGTGAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR TCA 90 bp CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCAATGACCTTCCATCCTaGATATCACCACCTTCAGTC +
Preference number: 2 (lower is better)
Translates to: PSRILISIIILLTQLWLVNDLPS*ISPPSV
Trigger: GACTGAAGGTGGTGATATTCAGGATGGAAGGTCATT...GACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR TCA 90 bp AAGAGCCATGTGATGTTAATGGTGACAACAAAGACATCTCAGATAAACCTAGTTCATTACAGATGCTTGTaGGCCACCATGTGGTTACTG +
Preference number: 2 (lower is better)
Translates to: KSHVMLMVTTKTSQINLVHYRCL*ATMWLL
Trigger: CAGTAACCACATGGTGGCTCACAAGCATCTGTAATG...AACTAGGTTTATCTGAGATGTCTTTGTTGTCACCATTAACATCACATGGCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR CCA 90 bp AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGAAGTCTTCCCAATCACTaGGTTTCAGACCTACACAGA +
Preference number: 2 (lower is better)
Translates to: SFYLNRQFNRSQDKQITRSLPNH*VSDLHR
Trigger: TCTGTGTAGGTCTGAAACCCAGTGATTGGGAAGACT...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR TCA 90 bp CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCTGCTCAGCTAAAATCTaGGATTCCCGAAATGCTTTC +
Preference number: 2 (lower is better)
Translates to: PSRILISIIILLTQLWLVCSAKI*DSRNAF
Trigger: GAAAGCATTTCGGGAATCTCAGATTTTAGCTGAGCA...GACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR TCA 90 bp AAGAGCCATGTGATGTTAATGGTGACAACAAAGACATCTCAGATAAACCTAGTTCTAAGGGCTGTTCCATaGACAATGTCCTTTCCACAT +
Preference number: 2 (lower is better)
Translates to: KSHVMLMVTTKTSQINLVLRAVP*TMSFPH
Trigger: ATGTGGAAAGGACATTGTTCATGGAACAGCCCTTAG...AACTAGGTTTATCTGAGATGTCTTTGTTGTCACCATTAACATCACATGGCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR CCA 90 bp CTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCCTCCACCATGTGGTTACTaGGAATTGAACATTAGGACT +
Preference number: 2 (lower is better)
Translates to: LKDFDIYYNPLDTTLAGPPPCGY*ELNIRT
Trigger: AGTCCTAATGTTCAATTCCCAGTAACCACATGGTGG...AGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR GCA 90 bp CTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCCTGTAACAGGATTTTCATaGAATGGCTTGTCCACCTTT +
Preference number: 2 (lower is better)
Translates to: LKDFDIYYNPLDTTLAGPVTGFS*NGLSTF
Trigger: AAAGGTGGACAAGCCATTGCATGAAAATCCTGTTAC...AGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR GCA 90 bp AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGATGGACTTTCTTCTCCTaGTACAAATGTATAGTTCAT +
Preference number: 2 (lower is better)
Translates to: SFYLNRQFNRSQDKQITRWTFFS*YKCIVH
Trigger: ATGAACTATACATTTGTAGCAGGAGAAGAAAGTCCA...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR CAA 90 bp ATTGAACAAATACCCTCAAGGATTTTGATATCTATTATAATCCTCTaGACACAACTTTGGCTGGTCCTGTGTTGCCCACTAACAAATTAT +
Preference number: 2 (lower is better)
Translates to: IEQIPSRILISIIIL*TQLWLVLCCPLTNY
Trigger: ATAATTTGTTAGTGGGCAACACAGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGGTATTTGTTCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR CCA 72 bp CGACTCGCCAGCTCCTACTGCCTTCATGGACCATTCTaGCCTATGACAAGGGGAGGGAGTCCCACGAGGGTC +
Preference number: 3 (lower is better)
Translates to: RLASSYCLHGPF*PMTRGGSPTRV
Trigger: GACCCTCGTGGGACTCCCTCCCCTTGTCATAGGCCAGAATGGTCCATGAAGGCAGTAGGAGCTGGCGAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR TCA 72 bp CCAGCTCCTACTGCCTTCATGGACCATTCTGGCCTATaGCAAGGGGAGGGAGTCCCACGAGGGTCTTTTAAT +
Preference number: 3 (lower is better)
Translates to: PAPTAFMDHSGL*QGEGVPRGSFN
Trigger: ATTAAAAGACCCTCGTGGGACTCCCTCCCCTTGTCATAGGCCAGAATGGTCCATGAAGGCAGTAGGAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR CCA 72 bp GAAGTCCACCATGGCTGGCTGGATAGCCTCTGGGCTTaGCACACTATGAGACACCCTTTCTTAGAAGAGATG +
Preference number: 3 (lower is better)
Translates to: EVHHGWLDSLWA*HTMRHPFLEEM
Trigger: CATCTCTTCTAAGAAAGGGTGTCTCATAGTGTGCCAAGCCCAGAGGCTATCCAGCCAGCCATGGTGGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR CAA 90 bp CATCAGACACATCAGAAGAGGGCATCGGATCCCATTACAGATGCTTGTGAGCCAACAGCCAGCCCTATGTaGAACAAGGCTGGAAGCAAG +
Preference number: 3 (lower is better)
Translates to: HQTHQKRASDPITDACEPTASPM*NKAGSK
Trigger: CTTGCTTCCAGCCTTGTTCAACATAGGGCTGGCTGT...TGGCTCACAAGCATCTGTAATGGGATCCGATGCCCTCTTCTGATGTGTCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR TCA 72 bp ATGGTCTCACACCAGCATGAACAGCCAGCCCTATGTTaGACAAGGCTGGAAGCAAGCTTGAAGGACTTCCCA +
Preference number: 3 (lower is better)
Translates to: MVSHQHEQPALC*TRLEASLKDFP
Trigger: TGGGAAGTCCTTCAAGCTTGCTTCCAGCCTTGTTCAACATAGGGCTGGCTGTTCATGCTGGTGTGAGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR CAA 90 bp CTGAACGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGGACTTCCCACATACCTaGCATTTAAAGGGCTATGGA +
Preference number: 3 (lower is better)
Translates to: LNVRSSNPSNHMVAHNHPDFPHT*HLKGYG
Trigger: TCCATAGCCCTTTAAATGCAAGGTATGTGGGAAGTC...CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCGGACGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR TCA 72 bp ACCACATGGTGGCTCACAACCATCCGTAATGAGATCTaGCCCCCTCTTCTGGAGTGTTTGAAGACAGCTACA +
Preference number: 3 (lower is better)
Translates to: TTWWLTTIRNEI*PPLLECLKTAT
Trigger: TGTAGCTGTCTTCAAACACTCCAGAAGAGGGGGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR CCA 72 bp ACACCCTTTCTTAGAAGAGATGCTCCTCTGACTGCCTaGGGAATTCAATCCCTCCATGTAAACCTCGACCTA +
Preference number: 3 (lower is better)
Translates to: TPFLRRDAPLTA*GIQSLHVNLDL
Trigger: TAGGTCGAGGTTTACATGGAGGGATTGAATTCCCCAGGCAGTCAGAGGAGCATCTCTTCTAAGAAAGGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR TCA 72 bp CCTTATTCTTTATATTCACAGAGGCAGGCGGATTTCTaGGTTCGAAGCCAGCCTGGTCTACAGAGTGAGTTC +
Preference number: 3 (lower is better)
Translates to: PYSLYSQRQADF*VRSQPGLQSEF
Trigger: GAACTCACTCTGTAGACCAGGCTGGCTTCGAACTCAGAAATCCGCCTGCCTCTGTGAATATAAAGAATAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR TCA 72 bp CAGATGCTTGTGAGCCACCATGTGGTTACTGGGAATTaGACATTAGGACTTCTGAAAGAGCAGTCAGTGCTC +
Preference number: 3 (lower is better)
Translates to: QMLVSHHVVTGN*TLGLLKEQSVL
Trigger: GAGCACTGACTGCTCTTTCAGAAGTCCTAATGTTCAATTCCCAGTAACCACATGGTGGCTCACAAGCATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR CAA 90 bp CATCAGACACATCAGAAGAGGGCATCGGATCCCATTACAGATGCTTGTGAGCCATGTGGTTACTGGGAATaGAACATTAGGACTTCTGAA +
Preference number: 3 (lower is better)
Translates to: HQTHQKRASDPITDACEPCGYWE*NIRTSE
Trigger: TTCAGAAGTCCTAATGTTCAATTCCCAGTAACCACA...TGGCTCACAAGCATCTGTAATGGGATCCGATGCCCTCTTCTGATGTGTCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR TCA 72 bp TATCACCACCTTCAGTCCCCCAAACTTCCTAAGCCTTaGGTCACCCTAGGTAAAACTGATCTGCTTCCTAAT +
Preference number: 3 (lower is better)
Translates to: YHHLQSPKLPKP*VTLGKTDLLPN
Trigger: ATTAGGAAGCAGATCAGTTTTACCTAGGGTGACTCAAGGCTTAGGAAGTTTGGGGGACTGAAGGTGGTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR CCA 72 bp CCCATTACAGATGCTTGTGAGCCACCATGTGGTTACTaGGAATTGAACATTAGGACTTCTGAAAGAGCAGTC +
Preference number: 3 (lower is better)
Translates to: PITDACEPPCGY*ELNIRTSERAV
Trigger: GACTGCTCTTTCAGAAGTCCTAATGTTCAATTCCCAGTAACCACATGGTGGCTCACAAGCATCTGTAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR CAA 90 bp GGACTCACAATTCAAATCCTTTCATGTTCCTTTTCATCCATTAGATGTATCCAGAGGCTGGAAGCAAGCTaGAAGGACTTCCCACATACC +
Preference number: 3 (lower is better)
Translates to: GLTIQILSCSFSSIRCIQRLEAS*KDFPHT
Trigger: GGTATGTGGGAAGTCCTTCAAGCTTGCTTCCAGCCT...CTGGATACATCTAATGGATGAAAAGGAACATGAAAGGATTTGAATTGTGAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR CAA 90 bp AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGAAGGCCTGCGCTGCAATaGAAGGTCTTTCCACATTCT +
Preference number: 3 (lower is better)
Translates to: SFYLNRQFNRSQDKQITRRPALQ*KVFPHS
Trigger: AGAATGTGGAAAGACCTTCAATTGCAGCGCAGGCCT...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR-3UTR CAA 90 bp CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCCCTCTTCTGGAGTGTTaGAAGACAGCTACAGTGTAC +
Preference number: 3 (lower is better)
Translates to: PSRILISIIILLTQLWLVPLLEC*KTATVY
Trigger: GTACACTGTAGCTGTCTTCAAACACTCCAGAAGAGG...GACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR TCA 90 bp AAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGACCCCCCAGCATCTCCTTCCTaGCAACCCTGCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KSQQPHGGSQPSVMRSDPPASPS*QPCSPW
Trigger: CCAAGGACTGCAGGGTTGTCAGGAAGGAGATGCTGG...GGGGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR TCA 90 bp CTGAACGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGGGTGAGCCAGAAAAATaGAGGCCTTCCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: LNVRSSNPSNHMVAHNHPGEPEK*RPSHTP
Trigger: AGGAGTGTGGGAAGGCCTTCATTTTTCTGGCTCACC...CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCGGACGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR CCA 90 bp AAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGACCCCATCTGCCTCCAAATCTaGGCTCGGCCAGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: KSQQPHGGSQPSVMRSDPICLQI*ARPVCF
Trigger: GAAACAGACTGGCCGAGCCCAGATTTGGAGGCAGAT...GGGGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR GCA 90 bp TTTATATTCACAGAGGCAGGCGGATTTCTGAGTTCGAAGCCAGCCTGGTCTACAGATCTGGCTTGGAAATaGAACTTCCCACCACTGCGA +
Preference number: 4 (lower is better)
Translates to: FIFTEAGGFLSSKPAWSTDLAWK*NFPPLR
Trigger: TCGCAGTGGTGGGAAGTTGCATTTCCAAGCCAGATC...TGTAGACCAGGCTGGCTTCGAACTCAGAAATCCGCCTGCCTCTGTGAATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR GCA 90 bp TTTATATTCACAGAGGCAGGCGGATTTCTGAGTTCGAAGCCAGCCTGGTCTACAATGCTCAGAAAGGCATaGCCGAAGCCTAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: FIFTEAGGFLSSKPAWSTMLRKA*PKPKSF
Trigger: AAAGCTTTTAGGCTTCGGGCATGCCTTTCTGAGCAT...TGTAGACCAGGCTGGCTTCGAACTCAGAAATCCGCCTGCCTCTGTGAATATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR TCA 90 bp TTTATATTCACAGAGGCAGGCGGATTTCTGAGTTCGAAGCCAGCCTGGTCTACAGAGTTGAACTACAATTaGAGCACTTCCCACACTGTT +
Preference number: 4 (lower is better)
Translates to: FIFTEAGGFLSSKPAWSTELNYN*STSHTV
Trigger: AACAGTGTGGGAAGTGCTTCAATTGTAGTTCAACTC...TGTAGACCAGGCTGGCTTCGAACTCAGAAATCCGCCTGCCTCTGTGAATATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR CAA 72 bp ACAGATGCTTGTGAGCCACCATGTGGTTACTGGGAATaGAACATTAGGACTTCTGAAAGAGCAGTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TDACEPPCGYWE*NIRTSERAVSA
Trigger: AGCACTGACTGCTCTTTCAGAAGTCCTAATGTTCAATTCCCAGTAACCACATGGTGGCTCACAAGCATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR TCA 90 bp CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCGGTTGGAGACACGGTTaGAGATCTTCCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: PSRILISIIILLTQLWLVGWRHG*RSSHTP
Trigger: AGGAGTGTGGGAAGATCTTCAACCGTGTCTCCAACC...GACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR TCA 90 bp GGACTCACAATTCAAATCCTTTCATGTTCCTTTTCATCCATTAGATGTATCCAGGCTGGTACCTACTTCTaGAGGCTGACCCACACAGCT +
Preference number: 4 (lower is better)
Translates to: GLTIQILSCSFSSIRCIQAGTYF*RLTHTA
Trigger: AGCTGTGTGGGTCAGCCTTCAGAAGTAGGTACCAGC...CTGGATACATCTAATGGATGAAAAGGAACATGAAAGGATTTGAATTGTGAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR GCA 90 bp CTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCCTGCAACTTCCCACCACTaGGACCAGGTTGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: LKDFDIYYNPLDTTLAGPATSHH*DQVAVG
Trigger: ACCTACAGCAACCTGGTCGCAGTGGTGGGAAGTTGC...AGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR CCA 90 bp AAGAAATTGATAATGAGAGTGGAAAGATTCCCCACATGCCTTACATCAAAAGGGTGCCTTGTGAGCTGTTaGGGGAGTCTGAAGACCTTC +
Preference number: 4 (lower is better)
Translates to: KKLIMRVERFPTCLTSKGCLVSC*GSLKTF
Trigger: GAAGGTCTTCAGACTCCCCCAACAGCTCACAAGGCA...CCCTTTTGATGTAAGGCATGTGGGGAATCTTTCCACTCTCATTATCAATTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR TCA 90 bp AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGAGGTTTTTGTAAGCTGTaGGCAAGAGTCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SFYLNRQFNRSQDKQITRGFCKL*ARVWQV
Trigger: CACCTGCCAGACTCTTGCTCACAGCTTACAAAAACC...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR TCA 90 bp GGACTCACAATTCAAATCCTTTCATGTTCCTTTTCATCCATTAGATGTATCCAGGCTGTTGGAGGAGTCTaGAGGCCTTTCCACATTCCT +
Preference number: 4 (lower is better)
Translates to: GLTIQILSCSFSSIRCIQAVGGV*RPFHIP
Trigger: AGGAATGTGGAAAGGCCTTCAGACTCCTCCAACAGC...CTGGATACATCTAATGGATGAAAAGGAACATGAAAGGATTTGAATTGTGAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR GCA 90 bp CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCGTGCTGAATGAGCTGTaGCAGCAGAATGTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PSRILISIIILLTQLWLVVLNEL*QQNVGL
Trigger: AAGGCCTACATTCTGCTGGCACAGCTCATTCAGCAC...GACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR GCA 90 bp AAGAGCCATGTGATGTTAATGGTGACAACAAAGACATCTCAGATAAACCTAGTTGCAGAATGTAGGCCTTaGCACACTCCTGACACTGAA +
Preference number: 4 (lower is better)
Translates to: KSHVMLMVTTKTSQINLVAECRP*HTPDTE
Trigger: TTCAGTGTCAGGAGTGTGGCAAGGCCTACATTCTGC...AACTAGGTTTATCTGAGATGTCTTTGTTGTCACCATTAACATCACATGGCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR CCA 90 bp AAGAAATTGATAATGAGAGTGGAAAGATTCCCCACATGCCTTACATCAAAAGGGAGGTGTGAGCCAGTATaGAACTTCTTGCCACATTCC +
Preference number: 4 (lower is better)
Translates to: KKLIMRVERFPTCLTSKGRCEPV*NFLPHS
Trigger: GGAATGTGGCAAGAAGTTCCATACTGGCTCACACCT...CCCTTTTGATGTAAGGCATGTGGGGAATCTTTCCACTCTCATTATCAATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR CCA 90 bp CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCGTGCTGAGCAAGGTGTaGGCCAGTATAGAATTTCTT +
Preference number: 4 (lower is better)
Translates to: PSRILISIIILLTQLWLVVLSKV*ASIEFL
Trigger: AAGAAATTCTATACTGGCCCACACCTTGCTCAGCAC...GACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR GCA 90 bp AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGACAGGGCTCTTTCTCCTaGTCTAATAAGACAATCAGA +
Preference number: 4 (lower is better)
Translates to: SFYLNRQFNRSQDKQITRQGSFS*SNKTIR
Trigger: TCTGATTGTCTTATTAGAGCAGGAGAAAGAGCCCTG...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR CAA 72 bp ATACCCTCAAGGATTTTGATATCTATTATAATCCTCTaGACACAACTTTGGCTGGTCCTGTGTTGCCCACTA +
Preference number: 4 (lower is better)
Translates to: IPSRILISIIIL*TQLWLVLCCPL
Trigger: TAGTGGGCAACACAGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR CAA 72 bp GATTTTGATATCTATTATAATCCTCTTGACACAACTTaGGCTGGTCCTGTGTTGCCCACTAACAAATTATGC +
Preference number: 4 (lower is better)
Translates to: DFDIYYNPLDTT*AGPVLPTNKLC
Trigger: GCATAATTTGTTAGTGGGCAACACAGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR GCA 90 bp CTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCCTCAGTATGGAACTTCTTaGCACATTCCTTACATTCAA +
Preference number: 4 (lower is better)
Translates to: LKDFDIYYNPLDTTLAGPQYGTS*HIPYIQ
Trigger: TTGAATGTAAGGAATGTGGCAAGAAGTTCCATACTG...AGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
3UTR CAA 72 bp ATTCTTGCCAGTATGAATTCTAAACTATCCAAGAAATaGATAATGAGAGTGGAAAGATTCCCCACATGCCTT +
Preference number: 4 (lower is better)
Translates to: ILASMNSKLSKK*IMRVERFPTCL
Trigger: AAGGCATGTGGGGAATCTTTCCACTCTCATTATCAATTTCTTGGATAGTTTAGAATTCATACTGGCAAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR CAA 90 bp AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGACCCACAGACCATGTCTaGAGAACTGGAGCTGGCCAT +
Preference number: 5 (lower is better)
Translates to: SFYLNRQFNRSQDKQITRPTDHV*RTGAGH
Trigger: ATGGCCAGCTCCAGTTCTCAAGACATGGTCTGTGGG...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR CAA 90 bp CTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCCTAGGTTGGAGACACGGTaGAAGATCTTCCCACACTCC +
Preference number: 5 (lower is better)
Translates to: LKDFDIYYNPLDTTLAGPRLETR*KIFPHS
Trigger: GGAGTGTGGGAAGATCTTCAACCGTGTCTCCAACCT...AGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR CAA 90 bp CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCAGGTGGGAGACACACTaGAAAGACTTCCCACATTCC +
Preference number: 5 (lower is better)
Translates to: PSRILISIIILLTQLWLVRWETH*KDFPHS
Trigger: GGAATGTGGGAAGTCTTTCAAGTGTGTCTCCCACCT...GACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR CAA 90 bp AAGAAATTGATAATGAGAGTGGAAAGATTCCCCACATGCCTTACATCAAAAGGGACAATCAGATCTGGCTaGGAAATGCAACTTCCCACC +
Preference number: 5 (lower is better)
Translates to: KKLIMRVERFPTCLTSKGTIRSG*EMQLPT
Trigger: GGTGGGAAGTTGCATTTCCAAGCCAGATCTGATTGT...CCCTTTTGATGTAAGGCATGTGGGGAATCTTTCCACTCTCATTATCAATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR CAA 90 bp GGACTCACAATTCAAATCCTTTCATGTTCCTTTTCATCCATTAGATGTATCCAGATGAATAATCCTATGTaGAGCAAGGTGGGAGACACA +
Preference number: 5 (lower is better)
Translates to: GLTIQILSCSFSSIRCIQMNNPM*SKVGDT
Trigger: TGTGTCTCCCACCTTGCTCAACATAGGATTATTCAT...CTGGATACATCTAATGGATGAAAAGGAACATGAAAGGATTTGAATTGTGAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS-3UTR CAA 90 bp GGACTCACAATTCAAATCCTTTCATGTTCCTTTTCATCCATTAGATGTATCCAGCCAGTATGGAACTTCTaGCCACATTCCTTACATTCA +
Preference number: 5 (lower is better)
Translates to: GLTIQILSCSFSSIRCIQPVWNF*PHSLHS
Trigger: TGAATGTAAGGAATGTGGCAAGAAGTTCCATACTGG...CTGGATACATCTAATGGATGAAAAGGAACATGAAAGGATTTGAATTGTGAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS GCA 72 bp CCTGCTCTAATAAGACAATCAGATCTGGCTTGGAAATaGAACTTCCCACCACTGCGACCAGGTTGCTGTAGG +
Preference number: 6 (lower is better)
Translates to: PALIRQSDLAWK*NFPPLRPGCCR
Trigger: CCTACAGCAACCTGGTCGCAGTGGTGGGAAGTTGCATTTCCAAGCCAGATCTGATTGTCTTATTAGAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205671.2
CDS CAA 72 bp CTCACTACTGTGAGATTTCTGATGCCTTGTGAGCTGTaGGGGGAGTCTGAAGACCTTCCCATATTCCTTACA +
Preference number: 6 (lower is better)
Translates to: LTTVRFLMPCEL*GESEDLPIFLT
Trigger: TGTAAGGAATATGGGAAGGTCTTCAGACTCCCCCAACAGCTCACAAGGCATCAGAAATCTCACAGTAGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080175.7
ENSMUST00000205671.2
CDS CCA 72 bp AAATACATTTTCAGCATCATAATCTGCCTCCAAATCTaGGCTCGGCCAGTCTGTTTCTTCCTTCACAGCCAT +
Preference number: 6 (lower is better)
Translates to: KYIFSIIICLQI*ARPVCFFLHSH
Trigger: ATGGCTGTGAAGGAAGAAACAGACTGGCCGAGCCCAGATTTGGAGGCAGATTATGATGCTGAAAATGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080175.7
ENSMUST00000205671.2