Pregenerated sensors for ZFP626 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030604Ensembl transcript IDs: ENSMUST00000080175.7, ENSMUST00000205671.2
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTaGCCCCCTCTTCTGGAGTGTTTGAAGACAGCTACAGTGTACTTA | + |
Preference number: 1 (lower is better) Translates to: IPATTWWLTTIRNEI*PPLLECLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAAACACTCCAGAAGAGGGGGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR TCA 90 bp | CATCCTGAATATCACCACCTTCAGTCCCCCAAACTTCCTAAGCCTTaGGTCACCCTAGGTAAAACTGATCTGCTTCCTAATAGCTGGTCC | + |
Preference number: 1 (lower is better) Translates to: HPEYHHLQSPKLPKP*VTLGKTDLLPNSWS Trigger: GGACCAGCTATTAGGAAGCAGATCAGTTTTACCTAGGGTGACTCAAGGCTTAGGAAGTTTGGGGGACTGAAGGTGGTGATATTCAGGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR TCA 90 bp | AACAACCAGCTTACTTCATTCTCACTCTATTTTATTGTATGTATGTaGGTACACTTGTCGCTGTCATCAGACACATCAGAAGAGGGCATC | + |
Preference number: 1 (lower is better) Translates to: NNQLTSFSLYFIVCM*VHLSLSSDTSEEGI Trigger: GATGCCCTCTTCTGATGTGTCTGATGACAGCGACAAGTGTACTCACATACATACAATAAAATAGAGTGAGAATGAAGTAAGCTGGTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR CCA 90 bp | CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTaGCTGGTCCTGTGTTGCCCACTAACAAATTATGCAAAAACTAAG | + |
Preference number: 1 (lower is better) Translates to: PSRILISIIILLTQL*LVLCCPLTNYAKTK Trigger: CTTAGTTTTTGCATAATTTGTTAGTGGGCAACACAGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR TCA 90 bp | CTGAACGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGAAACTTCCTAAGCCTTaGGTCACCCTAGGTAAAACT | + |
Preference number: 2 (lower is better) Translates to: LNVRSSNPSNHMVAHNHPKLPKP*VTLGKT Trigger: AGTTTTACCTAGGGTGACTCAAGGCTTAGGAAGTTT...CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCGGACGTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR TCA 90 bp | CATCAGACACATCAGAAGAGGGCATCGGATCCCATTACAGATGCTTGTGAGCCAAAGAAAGGCTTTTCCTaGGTCTTCCCAATCACTGGG | + |
Preference number: 2 (lower is better) Translates to: HQTHQKRASDPITDACEPKKGFS*VFPITG Trigger: CCCAGTGATTGGGAAGACTCAGGAAAAGCCTTTCTT...TGGCTCACAAGCATCTGTAATGGGATCCGATGCCCTCTTCTGATGTGTCTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR GCA 90 bp | CTGAACGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTTTATGATGAAGGCCTaGGCTGCAATTGAAGGTCTT | + |
Preference number: 2 (lower is better) Translates to: LNVRSSNPSNHMVAHNHPFMMKA*AAIEGL Trigger: AAGACCTTCAATTGCAGCGCAGGCCTTCATCATAAA...CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCGGACGTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR CAA 90 bp | GATCCCATTACAGATGCTTGTGAGCCACCATGTGGTTACTGGGAATaGAACATTAGGACTTCTGAAAGAGCAGTCAGTGCTCTTAACCAC | + |
Preference number: 2 (lower is better) Translates to: DPITDACEPPCGYWE*NIRTSERAVSALNH Trigger: GTGGTTAAGAGCACTGACTGCTCTTTCAGAAGTCCTAATGTTCAATTCCCAGTAACCACATGGTGGCTCACAAGCATCTGTAATGGGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR TCA 90 bp | AAGAGCCATGTGATGTTAATGGTGACAACAAAGACATCTCAGATAAACCTAGTTGACCATTCTGGCCTATaGCAAGGGGAGGGAGTCCCA | + |
Preference number: 2 (lower is better) Translates to: KSHVMLMVTTKTSQINLVDHSGL*QGEGVP Trigger: TGGGACTCCCTCCCCTTGTCATAGGCCAGAATGGTC...AACTAGGTTTATCTGAGATGTCTTTGTTGTCACCATTAACATCACATGGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR TCA 90 bp | AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGACAGCCAGCCCTATGTTaGACAAGGCTGGAAGCAAGC | + |
Preference number: 2 (lower is better) Translates to: SFYLNRQFNRSQDKQITRQPALC*TRLEAS Trigger: GCTTGCTTCCAGCCTTGTTCAACATAGGGCTGGCTG...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR TCA 90 bp | CATCAGACACATCAGAAGAGGGCATCGGATCCCATTACAGATGCTTGTGAGCCAGTGGTTACTGGGAATTaGACATTAGGACTTCTGAAA | + |
Preference number: 2 (lower is better) Translates to: HQTHQKRASDPITDACEPVVTGN*TLGLLK Trigger: TTTCAGAAGTCCTAATGTTCAATTCCCAGTAACCAC...TGGCTCACAAGCATCTGTAATGGGATCCGATGCCCTCTTCTGATGTGTCTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR CCA 90 bp | AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGAGGTGAGATGGCTCAGTaGGTAAGAGCACCTGACTGC | + |
Preference number: 2 (lower is better) Translates to: SFYLNRQFNRSQDKQITRGEMAQ*VRAPDC Trigger: GCAGTCAGGTGCTCTTACCCACTGAGCCATCTCACC...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR TCA 90 bp | AAGAAATTGATAATGAGAGTGGAAAGATTCCCCACATGCCTTACATCAAAAGGGGGCTGGAAGCAAGCTTaGAGGACTTCCCACATACCT | + |
Preference number: 2 (lower is better) Translates to: KKLIMRVERFPTCLTSKGGWKQA*RTSHIP Trigger: AGGTATGTGGGAAGTCCTTCAAGCTTGCTTCCAGCC...CCCTTTTGATGTAAGGCATGTGGGGAATCTTTCCACTCTCATTATCAATTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR CCA 90 bp | CTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCCTGATAGCCTCTGGGCTTaGCACACTATGAGACACCCT | + |
Preference number: 2 (lower is better) Translates to: LKDFDIYYNPLDTTLAGPDSLWA*HTMRHP Trigger: AGGGTGTCTCATAGTGTGCCAAGCCCAGAGGCTATC...AGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR TCA 90 bp | GGACTCACAATTCAAATCCTTTCATGTTCCTTTTCATCCATTAGATGTATCCAGGAAGAGATGCTCCTCTaGCTGCCTGGGGAATTCAAT | + |
Preference number: 2 (lower is better) Translates to: GLTIQILSCSFSSIRCIQEEMLL*LPGEFN Trigger: ATTGAATTCCCCAGGCAGTCAGAGGAGCATCTCTTC...CTGGATACATCTAATGGATGAAAAGGAACATGAAAGGATTTGAATTGTGAGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR TCA 90 bp | CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCAATGACCTTCCATCCTaGATATCACCACCTTCAGTC | + |
Preference number: 2 (lower is better) Translates to: PSRILISIIILLTQLWLVNDLPS*ISPPSV Trigger: GACTGAAGGTGGTGATATTCAGGATGGAAGGTCATT...GACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR TCA 90 bp | AAGAGCCATGTGATGTTAATGGTGACAACAAAGACATCTCAGATAAACCTAGTTCATTACAGATGCTTGTaGGCCACCATGTGGTTACTG | + |
Preference number: 2 (lower is better) Translates to: KSHVMLMVTTKTSQINLVHYRCL*ATMWLL Trigger: CAGTAACCACATGGTGGCTCACAAGCATCTGTAATG...AACTAGGTTTATCTGAGATGTCTTTGTTGTCACCATTAACATCACATGGCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR CCA 90 bp | AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGAAGTCTTCCCAATCACTaGGTTTCAGACCTACACAGA | + |
Preference number: 2 (lower is better) Translates to: SFYLNRQFNRSQDKQITRSLPNH*VSDLHR Trigger: TCTGTGTAGGTCTGAAACCCAGTGATTGGGAAGACT...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR TCA 90 bp | CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCTGCTCAGCTAAAATCTaGGATTCCCGAAATGCTTTC | + |
Preference number: 2 (lower is better) Translates to: PSRILISIIILLTQLWLVCSAKI*DSRNAF Trigger: GAAAGCATTTCGGGAATCTCAGATTTTAGCTGAGCA...GACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR TCA 90 bp | AAGAGCCATGTGATGTTAATGGTGACAACAAAGACATCTCAGATAAACCTAGTTCTAAGGGCTGTTCCATaGACAATGTCCTTTCCACAT | + |
Preference number: 2 (lower is better) Translates to: KSHVMLMVTTKTSQINLVLRAVP*TMSFPH Trigger: ATGTGGAAAGGACATTGTTCATGGAACAGCCCTTAG...AACTAGGTTTATCTGAGATGTCTTTGTTGTCACCATTAACATCACATGGCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR CCA 90 bp | CTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCCTCCACCATGTGGTTACTaGGAATTGAACATTAGGACT | + |
Preference number: 2 (lower is better) Translates to: LKDFDIYYNPLDTTLAGPPPCGY*ELNIRT Trigger: AGTCCTAATGTTCAATTCCCAGTAACCACATGGTGG...AGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR GCA 90 bp | CTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCCTGTAACAGGATTTTCATaGAATGGCTTGTCCACCTTT | + |
Preference number: 2 (lower is better) Translates to: LKDFDIYYNPLDTTLAGPVTGFS*NGLSTF Trigger: AAAGGTGGACAAGCCATTGCATGAAAATCCTGTTAC...AGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR GCA 90 bp | AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGATGGACTTTCTTCTCCTaGTACAAATGTATAGTTCAT | + |
Preference number: 2 (lower is better) Translates to: SFYLNRQFNRSQDKQITRWTFFS*YKCIVH Trigger: ATGAACTATACATTTGTAGCAGGAGAAGAAAGTCCA...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR CAA 90 bp | ATTGAACAAATACCCTCAAGGATTTTGATATCTATTATAATCCTCTaGACACAACTTTGGCTGGTCCTGTGTTGCCCACTAACAAATTAT | + |
Preference number: 2 (lower is better) Translates to: IEQIPSRILISIIIL*TQLWLVLCCPLTNY Trigger: ATAATTTGTTAGTGGGCAACACAGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGGTATTTGTTCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR CCA 72 bp | CGACTCGCCAGCTCCTACTGCCTTCATGGACCATTCTaGCCTATGACAAGGGGAGGGAGTCCCACGAGGGTC | + |
Preference number: 3 (lower is better) Translates to: RLASSYCLHGPF*PMTRGGSPTRV Trigger: GACCCTCGTGGGACTCCCTCCCCTTGTCATAGGCCAGAATGGTCCATGAAGGCAGTAGGAGCTGGCGAGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR TCA 72 bp | CCAGCTCCTACTGCCTTCATGGACCATTCTGGCCTATaGCAAGGGGAGGGAGTCCCACGAGGGTCTTTTAAT | + |
Preference number: 3 (lower is better) Translates to: PAPTAFMDHSGL*QGEGVPRGSFN Trigger: ATTAAAAGACCCTCGTGGGACTCCCTCCCCTTGTCATAGGCCAGAATGGTCCATGAAGGCAGTAGGAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR CCA 72 bp | GAAGTCCACCATGGCTGGCTGGATAGCCTCTGGGCTTaGCACACTATGAGACACCCTTTCTTAGAAGAGATG | + |
Preference number: 3 (lower is better) Translates to: EVHHGWLDSLWA*HTMRHPFLEEM Trigger: CATCTCTTCTAAGAAAGGGTGTCTCATAGTGTGCCAAGCCCAGAGGCTATCCAGCCAGCCATGGTGGACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR CAA 90 bp | CATCAGACACATCAGAAGAGGGCATCGGATCCCATTACAGATGCTTGTGAGCCAACAGCCAGCCCTATGTaGAACAAGGCTGGAAGCAAG | + |
Preference number: 3 (lower is better) Translates to: HQTHQKRASDPITDACEPTASPM*NKAGSK Trigger: CTTGCTTCCAGCCTTGTTCAACATAGGGCTGGCTGT...TGGCTCACAAGCATCTGTAATGGGATCCGATGCCCTCTTCTGATGTGTCTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR TCA 72 bp | ATGGTCTCACACCAGCATGAACAGCCAGCCCTATGTTaGACAAGGCTGGAAGCAAGCTTGAAGGACTTCCCA | + |
Preference number: 3 (lower is better) Translates to: MVSHQHEQPALC*TRLEASLKDFP Trigger: TGGGAAGTCCTTCAAGCTTGCTTCCAGCCTTGTTCAACATAGGGCTGGCTGTTCATGCTGGTGTGAGACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR CAA 90 bp | CTGAACGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGGACTTCCCACATACCTaGCATTTAAAGGGCTATGGA | + |
Preference number: 3 (lower is better) Translates to: LNVRSSNPSNHMVAHNHPDFPHT*HLKGYG Trigger: TCCATAGCCCTTTAAATGCAAGGTATGTGGGAAGTC...CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCGGACGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCCGTAATGAGATCTaGCCCCCTCTTCTGGAGTGTTTGAAGACAGCTACA | + |
Preference number: 3 (lower is better) Translates to: TTWWLTTIRNEI*PPLLECLKTAT Trigger: TGTAGCTGTCTTCAAACACTCCAGAAGAGGGGGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR CCA 72 bp | ACACCCTTTCTTAGAAGAGATGCTCCTCTGACTGCCTaGGGAATTCAATCCCTCCATGTAAACCTCGACCTA | + |
Preference number: 3 (lower is better) Translates to: TPFLRRDAPLTA*GIQSLHVNLDL Trigger: TAGGTCGAGGTTTACATGGAGGGATTGAATTCCCCAGGCAGTCAGAGGAGCATCTCTTCTAAGAAAGGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR TCA 72 bp | CCTTATTCTTTATATTCACAGAGGCAGGCGGATTTCTaGGTTCGAAGCCAGCCTGGTCTACAGAGTGAGTTC | + |
Preference number: 3 (lower is better) Translates to: PYSLYSQRQADF*VRSQPGLQSEF Trigger: GAACTCACTCTGTAGACCAGGCTGGCTTCGAACTCAGAAATCCGCCTGCCTCTGTGAATATAAAGAATAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR TCA 72 bp | CAGATGCTTGTGAGCCACCATGTGGTTACTGGGAATTaGACATTAGGACTTCTGAAAGAGCAGTCAGTGCTC | + |
Preference number: 3 (lower is better) Translates to: QMLVSHHVVTGN*TLGLLKEQSVL Trigger: GAGCACTGACTGCTCTTTCAGAAGTCCTAATGTTCAATTCCCAGTAACCACATGGTGGCTCACAAGCATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR CAA 90 bp | CATCAGACACATCAGAAGAGGGCATCGGATCCCATTACAGATGCTTGTGAGCCATGTGGTTACTGGGAATaGAACATTAGGACTTCTGAA | + |
Preference number: 3 (lower is better) Translates to: HQTHQKRASDPITDACEPCGYWE*NIRTSE Trigger: TTCAGAAGTCCTAATGTTCAATTCCCAGTAACCACA...TGGCTCACAAGCATCTGTAATGGGATCCGATGCCCTCTTCTGATGTGTCTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR TCA 72 bp | TATCACCACCTTCAGTCCCCCAAACTTCCTAAGCCTTaGGTCACCCTAGGTAAAACTGATCTGCTTCCTAAT | + |
Preference number: 3 (lower is better) Translates to: YHHLQSPKLPKP*VTLGKTDLLPN Trigger: ATTAGGAAGCAGATCAGTTTTACCTAGGGTGACTCAAGGCTTAGGAAGTTTGGGGGACTGAAGGTGGTGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR CCA 72 bp | CCCATTACAGATGCTTGTGAGCCACCATGTGGTTACTaGGAATTGAACATTAGGACTTCTGAAAGAGCAGTC | + |
Preference number: 3 (lower is better) Translates to: PITDACEPPCGY*ELNIRTSERAV Trigger: GACTGCTCTTTCAGAAGTCCTAATGTTCAATTCCCAGTAACCACATGGTGGCTCACAAGCATCTGTAATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR CAA 90 bp | GGACTCACAATTCAAATCCTTTCATGTTCCTTTTCATCCATTAGATGTATCCAGAGGCTGGAAGCAAGCTaGAAGGACTTCCCACATACC | + |
Preference number: 3 (lower is better) Translates to: GLTIQILSCSFSSIRCIQRLEAS*KDFPHT Trigger: GGTATGTGGGAAGTCCTTCAAGCTTGCTTCCAGCCT...CTGGATACATCTAATGGATGAAAAGGAACATGAAAGGATTTGAATTGTGAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR CAA 90 bp | AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGAAGGCCTGCGCTGCAATaGAAGGTCTTTCCACATTCT | + |
Preference number: 3 (lower is better) Translates to: SFYLNRQFNRSQDKQITRRPALQ*KVFPHS Trigger: AGAATGTGGAAAGACCTTCAATTGCAGCGCAGGCCT...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR-3UTR CAA 90 bp | CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCCCTCTTCTGGAGTGTTaGAAGACAGCTACAGTGTAC | + |
Preference number: 3 (lower is better) Translates to: PSRILISIIILLTQLWLVPLLEC*KTATVY Trigger: GTACACTGTAGCTGTCTTCAAACACTCCAGAAGAGG...GACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR TCA 90 bp | AAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGACCCCCCAGCATCTCCTTCCTaGCAACCCTGCAGTCCTTGG | + |
Preference number: 4 (lower is better) Translates to: KSQQPHGGSQPSVMRSDPPASPS*QPCSPW Trigger: CCAAGGACTGCAGGGTTGTCAGGAAGGAGATGCTGG...GGGGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR TCA 90 bp | CTGAACGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGGGTGAGCCAGAAAAATaGAGGCCTTCCCACACTCCT | + |
Preference number: 4 (lower is better) Translates to: LNVRSSNPSNHMVAHNHPGEPEK*RPSHTP Trigger: AGGAGTGTGGGAAGGCCTTCATTTTTCTGGCTCACC...CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCGGACGTTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR CCA 90 bp | AAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGACCCCATCTGCCTCCAAATCTaGGCTCGGCCAGTCTGTTTC | + |
Preference number: 4 (lower is better) Translates to: KSQQPHGGSQPSVMRSDPICLQI*ARPVCF Trigger: GAAACAGACTGGCCGAGCCCAGATTTGGAGGCAGAT...GGGGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR GCA 90 bp | TTTATATTCACAGAGGCAGGCGGATTTCTGAGTTCGAAGCCAGCCTGGTCTACAGATCTGGCTTGGAAATaGAACTTCCCACCACTGCGA | + |
Preference number: 4 (lower is better) Translates to: FIFTEAGGFLSSKPAWSTDLAWK*NFPPLR Trigger: TCGCAGTGGTGGGAAGTTGCATTTCCAAGCCAGATC...TGTAGACCAGGCTGGCTTCGAACTCAGAAATCCGCCTGCCTCTGTGAATATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR GCA 90 bp | TTTATATTCACAGAGGCAGGCGGATTTCTGAGTTCGAAGCCAGCCTGGTCTACAATGCTCAGAAAGGCATaGCCGAAGCCTAAAAGCTTT | + |
Preference number: 4 (lower is better) Translates to: FIFTEAGGFLSSKPAWSTMLRKA*PKPKSF Trigger: AAAGCTTTTAGGCTTCGGGCATGCCTTTCTGAGCAT...TGTAGACCAGGCTGGCTTCGAACTCAGAAATCCGCCTGCCTCTGTGAATATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR TCA 90 bp | TTTATATTCACAGAGGCAGGCGGATTTCTGAGTTCGAAGCCAGCCTGGTCTACAGAGTTGAACTACAATTaGAGCACTTCCCACACTGTT | + |
Preference number: 4 (lower is better) Translates to: FIFTEAGGFLSSKPAWSTELNYN*STSHTV Trigger: AACAGTGTGGGAAGTGCTTCAATTGTAGTTCAACTC...TGTAGACCAGGCTGGCTTCGAACTCAGAAATCCGCCTGCCTCTGTGAATATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR CAA 72 bp | ACAGATGCTTGTGAGCCACCATGTGGTTACTGGGAATaGAACATTAGGACTTCTGAAAGAGCAGTCAGTGCT | + |
Preference number: 4 (lower is better) Translates to: TDACEPPCGYWE*NIRTSERAVSA Trigger: AGCACTGACTGCTCTTTCAGAAGTCCTAATGTTCAATTCCCAGTAACCACATGGTGGCTCACAAGCATCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR TCA 90 bp | CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCGGTTGGAGACACGGTTaGAGATCTTCCCACACTCCT | + |
Preference number: 4 (lower is better) Translates to: PSRILISIIILLTQLWLVGWRHG*RSSHTP Trigger: AGGAGTGTGGGAAGATCTTCAACCGTGTCTCCAACC...GACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR TCA 90 bp | GGACTCACAATTCAAATCCTTTCATGTTCCTTTTCATCCATTAGATGTATCCAGGCTGGTACCTACTTCTaGAGGCTGACCCACACAGCT | + |
Preference number: 4 (lower is better) Translates to: GLTIQILSCSFSSIRCIQAGTYF*RLTHTA Trigger: AGCTGTGTGGGTCAGCCTTCAGAAGTAGGTACCAGC...CTGGATACATCTAATGGATGAAAAGGAACATGAAAGGATTTGAATTGTGAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR GCA 90 bp | CTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCCTGCAACTTCCCACCACTaGGACCAGGTTGCTGTAGGT | + |
Preference number: 4 (lower is better) Translates to: LKDFDIYYNPLDTTLAGPATSHH*DQVAVG Trigger: ACCTACAGCAACCTGGTCGCAGTGGTGGGAAGTTGC...AGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR CCA 90 bp | AAGAAATTGATAATGAGAGTGGAAAGATTCCCCACATGCCTTACATCAAAAGGGTGCCTTGTGAGCTGTTaGGGGAGTCTGAAGACCTTC | + |
Preference number: 4 (lower is better) Translates to: KKLIMRVERFPTCLTSKGCLVSC*GSLKTF Trigger: GAAGGTCTTCAGACTCCCCCAACAGCTCACAAGGCA...CCCTTTTGATGTAAGGCATGTGGGGAATCTTTCCACTCTCATTATCAATTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR TCA 90 bp | AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGAGGTTTTTGTAAGCTGTaGGCAAGAGTCTGGCAGGTG | + |
Preference number: 4 (lower is better) Translates to: SFYLNRQFNRSQDKQITRGFCKL*ARVWQV Trigger: CACCTGCCAGACTCTTGCTCACAGCTTACAAAAACC...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR TCA 90 bp | GGACTCACAATTCAAATCCTTTCATGTTCCTTTTCATCCATTAGATGTATCCAGGCTGTTGGAGGAGTCTaGAGGCCTTTCCACATTCCT | + |
Preference number: 4 (lower is better) Translates to: GLTIQILSCSFSSIRCIQAVGGV*RPFHIP Trigger: AGGAATGTGGAAAGGCCTTCAGACTCCTCCAACAGC...CTGGATACATCTAATGGATGAAAAGGAACATGAAAGGATTTGAATTGTGAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR GCA 90 bp | CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCGTGCTGAATGAGCTGTaGCAGCAGAATGTAGGCCTT | + |
Preference number: 4 (lower is better) Translates to: PSRILISIIILLTQLWLVVLNEL*QQNVGL Trigger: AAGGCCTACATTCTGCTGGCACAGCTCATTCAGCAC...GACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR GCA 90 bp | AAGAGCCATGTGATGTTAATGGTGACAACAAAGACATCTCAGATAAACCTAGTTGCAGAATGTAGGCCTTaGCACACTCCTGACACTGAA | + |
Preference number: 4 (lower is better) Translates to: KSHVMLMVTTKTSQINLVAECRP*HTPDTE Trigger: TTCAGTGTCAGGAGTGTGGCAAGGCCTACATTCTGC...AACTAGGTTTATCTGAGATGTCTTTGTTGTCACCATTAACATCACATGGCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR CCA 90 bp | AAGAAATTGATAATGAGAGTGGAAAGATTCCCCACATGCCTTACATCAAAAGGGAGGTGTGAGCCAGTATaGAACTTCTTGCCACATTCC | + |
Preference number: 4 (lower is better) Translates to: KKLIMRVERFPTCLTSKGRCEPV*NFLPHS Trigger: GGAATGTGGCAAGAAGTTCCATACTGGCTCACACCT...CCCTTTTGATGTAAGGCATGTGGGGAATCTTTCCACTCTCATTATCAATTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR CCA 90 bp | CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCGTGCTGAGCAAGGTGTaGGCCAGTATAGAATTTCTT | + |
Preference number: 4 (lower is better) Translates to: PSRILISIIILLTQLWLVVLSKV*ASIEFL Trigger: AAGAAATTCTATACTGGCCCACACCTTGCTCAGCAC...GACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR GCA 90 bp | AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGACAGGGCTCTTTCTCCTaGTCTAATAAGACAATCAGA | + |
Preference number: 4 (lower is better) Translates to: SFYLNRQFNRSQDKQITRQGSFS*SNKTIR Trigger: TCTGATTGTCTTATTAGAGCAGGAGAAAGAGCCCTG...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR CAA 72 bp | ATACCCTCAAGGATTTTGATATCTATTATAATCCTCTaGACACAACTTTGGCTGGTCCTGTGTTGCCCACTA | + |
Preference number: 4 (lower is better) Translates to: IPSRILISIIIL*TQLWLVLCCPL Trigger: TAGTGGGCAACACAGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR CAA 72 bp | GATTTTGATATCTATTATAATCCTCTTGACACAACTTaGGCTGGTCCTGTGTTGCCCACTAACAAATTATGC | + |
Preference number: 4 (lower is better) Translates to: DFDIYYNPLDTT*AGPVLPTNKLC Trigger: GCATAATTTGTTAGTGGGCAACACAGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR GCA 90 bp | CTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCCTCAGTATGGAACTTCTTaGCACATTCCTTACATTCAA | + |
Preference number: 4 (lower is better) Translates to: LKDFDIYYNPLDTTLAGPQYGTS*HIPYIQ Trigger: TTGAATGTAAGGAATGTGGCAAGAAGTTCCATACTG...AGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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3UTR CAA 72 bp | ATTCTTGCCAGTATGAATTCTAAACTATCCAAGAAATaGATAATGAGAGTGGAAAGATTCCCCACATGCCTT | + |
Preference number: 4 (lower is better) Translates to: ILASMNSKLSKK*IMRVERFPTCL Trigger: AAGGCATGTGGGGAATCTTTCCACTCTCATTATCAATTTCTTGGATAGTTTAGAATTCATACTGGCAAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR CAA 90 bp | AGCTTTTATCTGAACAGGCAGTTTAACAGAAGCCAAGATAAGCAGATAACCAGACCCACAGACCATGTCTaGAGAACTGGAGCTGGCCAT | + |
Preference number: 5 (lower is better) Translates to: SFYLNRQFNRSQDKQITRPTDHV*RTGAGH Trigger: ATGGCCAGCTCCAGTTCTCAAGACATGGTCTGTGGG...TCTGGTTATCTGCTTATCTTGGCTTCTGTTAAACTGCCTGTTCAGATAAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR CAA 90 bp | CTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCCTAGGTTGGAGACACGGTaGAAGATCTTCCCACACTCC | + |
Preference number: 5 (lower is better) Translates to: LKDFDIYYNPLDTTLAGPRLETR*KIFPHS Trigger: GGAGTGTGGGAAGATCTTCAACCGTGTCTCCAACCT...AGGACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR CAA 90 bp | CCCTCAAGGATTTTGATATCTATTATAATCCTCTTGACACAACTTTGGCTGGTCAGGTGGGAGACACACTaGAAAGACTTCCCACATTCC | + |
Preference number: 5 (lower is better) Translates to: PSRILISIIILLTQLWLVRWETH*KDFPHS Trigger: GGAATGTGGGAAGTCTTTCAAGTGTGTCTCCCACCT...GACCAGCCAAAGTTGTGTCAAGAGGATTATAATAGATATCAAAATCCTTGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR CAA 90 bp | AAGAAATTGATAATGAGAGTGGAAAGATTCCCCACATGCCTTACATCAAAAGGGACAATCAGATCTGGCTaGGAAATGCAACTTCCCACC | + |
Preference number: 5 (lower is better) Translates to: KKLIMRVERFPTCLTSKGTIRSG*EMQLPT Trigger: GGTGGGAAGTTGCATTTCCAAGCCAGATCTGATTGT...CCCTTTTGATGTAAGGCATGTGGGGAATCTTTCCACTCTCATTATCAATTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR CAA 90 bp | GGACTCACAATTCAAATCCTTTCATGTTCCTTTTCATCCATTAGATGTATCCAGATGAATAATCCTATGTaGAGCAAGGTGGGAGACACA | + |
Preference number: 5 (lower is better) Translates to: GLTIQILSCSFSSIRCIQMNNPM*SKVGDT Trigger: TGTGTCTCCCACCTTGCTCAACATAGGATTATTCAT...CTGGATACATCTAATGGATGAAAAGGAACATGAAAGGATTTGAATTGTGAGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS-3UTR CAA 90 bp | GGACTCACAATTCAAATCCTTTCATGTTCCTTTTCATCCATTAGATGTATCCAGCCAGTATGGAACTTCTaGCCACATTCCTTACATTCA | + |
Preference number: 5 (lower is better) Translates to: GLTIQILSCSFSSIRCIQPVWNF*PHSLHS Trigger: TGAATGTAAGGAATGTGGCAAGAAGTTCCATACTGG...CTGGATACATCTAATGGATGAAAAGGAACATGAAAGGATTTGAATTGTGAGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS GCA 72 bp | CCTGCTCTAATAAGACAATCAGATCTGGCTTGGAAATaGAACTTCCCACCACTGCGACCAGGTTGCTGTAGG | + |
Preference number: 6 (lower is better) Translates to: PALIRQSDLAWK*NFPPLRPGCCR Trigger: CCTACAGCAACCTGGTCGCAGTGGTGGGAAGTTGCATTTCCAAGCCAGATCTGATTGTCTTATTAGAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205671.2 |
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CDS CAA 72 bp | CTCACTACTGTGAGATTTCTGATGCCTTGTGAGCTGTaGGGGGAGTCTGAAGACCTTCCCATATTCCTTACA | + |
Preference number: 6 (lower is better) Translates to: LTTVRFLMPCEL*GESEDLPIFLT Trigger: TGTAAGGAATATGGGAAGGTCTTCAGACTCCCCCAACAGCTCACAAGGCATCAGAAATCTCACAGTAGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080175.7 ENSMUST00000205671.2 |
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CDS CCA 72 bp | AAATACATTTTCAGCATCATAATCTGCCTCCAAATCTaGGCTCGGCCAGTCTGTTTCTTCCTTCACAGCCAT | + |
Preference number: 6 (lower is better) Translates to: KYIFSIIICLQI*ARPVCFFLHSH Trigger: ATGGCTGTGAAGGAAGAAACAGACTGGCCGAGCCCAGATTTGGAGGCAGATTATGATGCTGAAAATGTATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080175.7 ENSMUST00000205671.2 |