Pregenerated sensors for ZFP622 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052253Ensembl transcript IDs: ENSMUST00000061875.8, ENSMUST00000226884.2
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGCGTTTCCCACCTTATGCTGACAGCCAGAAAGCATCTGAAAGCTaGGGCAGGAAAGCAACTGTCAGGAGGTCATGCAGGTCCTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LRFPPYADSQKASES*GRKATVRRSCRSWS Trigger: GCTCCAGGACCTGCATGACCTCCTGACAGTTGCTTTCCTGCCTCAGCTTTCAGATGCTTTCTGGCTGTCAGCATAAGGTGGGAAACGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR GCA 90 bp | GGGCAACTTCCTAAGCCACATACATTCACAAGTGACATTCAGTTTTaGTCTTATATAATCCTCAAAGCCCCTGACGAAGGTCCCTTAGAC | + |
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Preference number: 1 (lower is better) Translates to: GQLPKPHTFTSDIQF*SYIILKAPDEGPLD Trigger: GTCTAAGGGACCTTCGTCAGGGGCTTTGAGGATTATATAAGAGCAAAACTGAATGTCACTTGTGAATGTATGTGGCTTAGGAAGTTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR TCA 90 bp | CACAGGAACGTCCTAGCTTTGACCTTGATATGGCACTTTGTATACTaGAAGAGTGTTTATTCACAAGCCTACTGCTGGGAAGTATATATT | + |
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Preference number: 1 (lower is better) Translates to: HRNVLALTLIWHFVY*KSVYSQAYCWEVYI Trigger: AATATATACTTCCCAGCAGTAGGCTTGTGAATAAACACTCTTTCAGTATACAAAGTGCCATATCAAGGTCAAAGCTAGGACGTTCCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR CCA 90 bp | ACAGATTTAAATATGTCAGAGATGTCAGGAGACCCAGTATTTCTGTaGGGAGGCTATAGAAAAGATGAAGGAATAGAATTCAAACCAAAG | + |
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Preference number: 1 (lower is better) Translates to: TDLNMSEMSGDPVFL*GGYRKDEGIEFKPK Trigger: CTTTGGTTTGAATTCTATTCCTTCATCTTTTCTATAGCCTCCCCACAGAAATACTGGGTCTCCTGACATCTCTGACATATTTAAATCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR-3UTR CCA 90 bp | CAACACACCCAGAGACATGGGCAACTTCCTAAGCCACATACATTCACAAGTGACAGGTCATGCAGGTCCTaGAGCCCAACAAGCAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: QHTQRHGQLPKPHTFTSDRSCRS*SPTSKP Trigger: GGGCTTGCTTGTTGGGCTCCAGGACCTGCATGACCT...GTCACTTGTGAATGTATGTGGCTTAGGAAGTTGCCCATGTCTCTGGGTGTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR-3UTR CCA 90 bp | AGATTTAAATATGTCAGAGATGTCAGGAGACCCAGTATTTCTGTGGGGAGGCTAAACCATTCGGCAATCTaGCTTCCCTGTCCTCAGACA | + |
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Preference number: 2 (lower is better) Translates to: RFKYVRDVRRPSISVGRLNHSAI*LPCPQT Trigger: TGTCTGAGGACAGGGAAGCCAGATTGCCGAATGGTT...TAGCCTCCCCACAGAAATACTGGGTCTCCTGACATCTCTGACATATTTAAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR-3UTR TCA 90 bp | CTAAGTGTCATAATAAAAGGTTGGCAAAGGTCATTTAGCACAGGGTCCAGGCAAAAAGCATCTGAAAGCTaGGGCAGGAAAGCAACTGTC | + |
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Preference number: 2 (lower is better) Translates to: LSVIIKGWQRSFSTGSRQKASES*GRKATV Trigger: GACAGTTGCTTTCCTGCCTCAGCTTTCAGATGCTTT...TTGCCTGGACCCTGTGCTAAATGACCTTTGCCAACCTTTTATTATGACACTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGAGATGTCAGGAGACCCAGTATTTCTGTGGGGAGGCTATAGAAAAGATGAAACTAGACAAATCGCTTaGGTTTCCCACCTTATGCTG | + |
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Preference number: 2 (lower is better) Translates to: SEMSGDPVFLWGGYRKDETRQIA*VSHLML Trigger: CAGCATAAGGTGGGAAACGCAAGCGATTTGTCTAGT...TTCATCTTTTCTATAGCCTCCCCACAGAAATACTGGGTCTCCTGACATCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR-3UTR GCA 90 bp | CTAAGTGTCATAATAAAAGGTTGGCAAAGGTCATTTAGCACAGGGTCCAGGCAAGAAAGCTTTAAACACTaGTCAAATACGACATTGAAG | + |
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Preference number: 2 (lower is better) Translates to: LSVIIKGWQRSFSTGSRQESFKH*SNTTLK Trigger: CTTCAATGTCGTATTTGAGCAGTGTTTAAAGCTTTC...TTGCCTGGACCCTGTGCTAAATGACCTTTGCCAACCTTTTATTATGACACTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR-3UTR TCA 90 bp | GAAATAAAAACCCTGCATACCAAGCCCTTAACATGTTCTGTTCTTTTCTGCATTTTAGATCAGAACAAATaGAGTAGCAGCAAAGGAACC | + |
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Preference number: 2 (lower is better) Translates to: EIKTLHTKPLTCSVLFCILDQNK*SSSKGT Trigger: GGTTCCTTTGCTGCTACTTCATTTGTTCTGATCTAA...AATGCAGAAAAGAACAGAACATGTTAAGGGCTTGGTATGCAGGGTTTTTATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR CCA 72 bp | GGCAGGAAAGCAACTGTCAGGAGGTCATGCAGGTCCTaGAGCCCAACAAGCAAGCCCAAGCTTCACATCCGT | + |
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Preference number: 3 (lower is better) Translates to: GRKATVRRSCRS*SPTSKPKLHIR Trigger: ACGGATGTGAAGCTTGGGCTTGCTTGTTGGGCTCCAGGACCTGCATGACCTCCTGACAGTTGCTTTCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR TCA 72 bp | CCACCTTATGCTGACAGCCAGAAAGCATCTGAAAGCTaGGGCAGGAAAGCAACTGTCAGGAGGTCATGCAGG | + |
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Preference number: 3 (lower is better) Translates to: PPYADSQKASES*GRKATVRRSCR Trigger: CCTGCATGACCTCCTGACAGTTGCTTTCCTGCCTCAGCTTTCAGATGCTTTCTGGCTGTCAGCATAAGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR GCA 72 bp | CTGCATACCAAGCCCTTAACATGTTCTGTTCTTTTCTaGATTTTATCAACACACCCAGAGACATGGGCAACT | + |
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Preference number: 3 (lower is better) Translates to: LHTKPLTCSVLF*ILSTHPETWAT Trigger: AGTTGCCCATGTCTCTGGGTGTGTTGATAAAATGCAGAAAAGAACAGAACATGTTAAGGGCTTGGTATGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR-3UTR CAA 90 bp | CTTCGTTCTTATTTGGAAATAAAAACCCTGCATACCAAGCCCTTAACATGTTCTCACATCCGTCCCCACTaGAAAGCTTTAAACACTGCT | + |
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Preference number: 3 (lower is better) Translates to: LRSYLEIKTLHTKPLTCSHIRPH*KALNTA Trigger: AGCAGTGTTTAAAGCTTTCAAGTGGGGACGGATGTG...AGAACATGTTAAGGGCTTGGTATGCAGGGTTTTTATTTCCAAATAAGAACGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR CCA 72 bp | AATATGTCAGAGATGTCAGGAGACCCAGTATTTCTGTaGGGAGGCTATAGAAAAGATGAAGGAATAGAATTC | + |
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Preference number: 3 (lower is better) Translates to: NMSEMSGDPVFL*GGYRKDEGIEF Trigger: GAATTCTATTCCTTCATCTTTTCTATAGCCTCCCCACAGAAATACTGGGTCTCCTGACATCTCTGACATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR TCA 72 bp | CATTCAGTTTTGCTCTTATATAATCCTCAAAGCCCCTaGCGAAGGTCCCTTAGACAAGAAGTAATGAGTTAT | + |
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Preference number: 3 (lower is better) Translates to: HSVLLLYNPQSP*RRSLRQEVMSY Trigger: ATAACTCATTACTTCTTGTCTAAGGGACCTTCGTCAGGGGCTTTGAGGATTATATAAGAGCAAAACTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR CCA 90 bp | GGAAAGCAACTGTCAGGAGGTCATGCAGGTCCTGGAGCCCAACAAGCAAGCCCAGCCCGCACCCGCTCCTaGAAGCCCTCGGCCGTCACC | + |
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Preference number: 4 (lower is better) Translates to: GKQLSGGHAGPGAQQASPARTRS*KPSAVT Trigger: GGTGACGGCCGAGGGCTTCCAGGAGCGGGTGCGGGC...TGGGCTTGCTTGTTGGGCTCCAGGACCTGCATGACCTCCTGACAGTTGCTTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR CCA 90 bp | CATGCAGGTCCTGGAGCCCAACAAGCAAGCCCAAGCTTCACATCCGTCCCCACTCGAAGGGCGCTTTCTTaGGGGACGTGGAGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: HAGPGAQQASPSFTSVPTRRALS*GTWRAG Trigger: CCCAGCCCTCCACGTCCCCCAAGAAAGCGCCCTTCG...AGTGGGGACGGATGTGAAGCTTGGGCTTGCTTGTTGGGCTCCAGGACCTGCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR GCA 90 bp | GGAAAGCAACTGTCAGGAGGTCATGCAGGTCCTGGAGCCCAACAAGCAAGCCCAGAGCTGCTCCTGTGCTaGCCATCCACCCCAGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GKQLSGGHAGPGAQQASPELLLC*PSTPGL Trigger: GAGCCCTGGGGTGGATGGGCAGCACAGGAGCAGCTC...TGGGCTTGCTTGTTGGGCTCCAGGACCTGCATGACCTCCTGACAGTTGCTTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR GCA 90 bp | CATCTGAAAGCTGAGGCAGGAAAGCAACTGTCAGGAGGTCATGCAGGTCCTGGACCATGGCGGCCACCTTaGGCCGCAGGTTGTAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: HLKAEAGKQLSGGHAGPGPWRPP*AAGCSG Trigger: ACCGCTACAACCTGCGGCGCAAGGTGGCCGCCATGG...TCCAGGACCTGCATGACCTCCTGACAGTTGCTTTCCTGCCTCAGCTTTCAGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR GCA 90 bp | CATCTGAAAGCTGAGGCAGGAAAGCAACTGTCAGGAGGTCATGCAGGTCCTGGATGGGCCTTGATGGCCTaGTGGATGGCGGCGTTCACG | + |
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Preference number: 4 (lower is better) Translates to: HLKAEAGKQLSGGHAGPGWALMA*WMAAFT Trigger: CGTGAACGCCGCCATCCAGCAGGCCATCAAGGCCCA...TCCAGGACCTGCATGACCTCCTGACAGTTGCTTTCCTGCCTCAGCTTTCAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR GCA 90 bp | GGAAAGCAACTGTCAGGAGGTCATGCAGGTCCTGGAGCCCAACAAGCAAGCCCATCTCCGTCCTCCCACTaGTGCTTCGCCAGCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GKQLSGGHAGPGAQQASPSPSSH*CFASFF Trigger: GAAGAAGCTGGCGAAGCAGCAGTGGGAGGACGGAGA...TGGGCTTGCTTGTTGGGCTCCAGGACCTGCATGACCTCCTGACAGTTGCTTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR TCA 90 bp | AGGTCCTGGAGCCCAACAAGCAAGCCCAAGCTTCACATCCGTCCCCACTTGAAAGGTTCTCGTAGGCGTTaGAGGTGGCGAACTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: RSWSPTSKPKLHIRPHLKGSRRR*RWRTSC Trigger: GCAAGAAGTTCGCCACCTTCAACGCCTACGAGAACC...TTTCAAGTGGGGACGGATGTGAAGCTTGGGCTTGCTTGTTGGGCTCCAGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR TCA 90 bp | CATCTGAAAGCTGAGGCAGGAAAGCAACTGTCAGGAGGTCATGCAGGTCCTGGAGCATCTTCTGCATCCTaGTCCTCCACTCCAGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: HLKAEAGKQLSGGHAGPGASSAS*SSTPGS Trigger: GGACCCTGGAGTGGAGGATCAGGATGCAGAAGATGC...TCCAGGACCTGCATGACCTCCTGACAGTTGCTTTCCTGCCTCAGCTTTCAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR GCA 90 bp | GCTTGCGTTTCCCACCTTATGCTGACAGCCAGAAAGCATCTGAAAGCTGAGGCAGCCAGCTTCTTCGCCTaGTGTTCGAACCACTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: ACVSHLMLTARKHLKAEAASFFA*CSNHWS Trigger: GCTCCAGTGGTTCGAACAGCAGGCGAAGAAGCTGGC...TGCCTCAGCTTTCAGATGCTTTCTGGCTGTCAGCATAAGGTGGGAAACGCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR TCA 90 bp | GGAAAGCAACTGTCAGGAGGTCATGCAGGTCCTGGAGCCCAACAAGCAAGCCCACTTCACGAGGGAGCTTaGATGATGGGAGCAAAACAA | + |
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Preference number: 4 (lower is better) Translates to: GKQLSGGHAGPGAQQASPLHEGA*MMGAKQ Trigger: TTGTTTTGCTCCCATCATTCAAGCTCCCTCGTGAAG...TGGGCTTGCTTGTTGGGCTCCAGGACCTGCATGACCTCCTGACAGTTGCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR CCA 90 bp | TCAGAGATGTCAGGAGACCCAGTATTTCTGTGGGGAGGCTATAGAAAAGATGAAGCCTTGATGGCCTGCTaGATGGCGGCGTTCACGGCG | + |
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Preference number: 4 (lower is better) Translates to: SEMSGDPVFLWGGYRKDEALMAC*MAAFTA Trigger: CGCCGTGAACGCCGCCATCCAGCAGGCCATCAAGGC...TTCATCTTTTCTATAGCCTCCCCACAGAAATACTGGGTCTCCTGACATCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR GCA 90 bp | CAACACACCCAGAGACATGGGCAACTTCCTAAGCCACATACATTCACAAGTGACAGCCGCTGCATCTTCTaGATCCTGATCCTCCACTCC | + |
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Preference number: 4 (lower is better) Translates to: QHTQRHGQLPKPHTFTSDSRCIF*ILILHS Trigger: GGAGTGGAGGATCAGGATGCAGAAGATGCAGCGGCT...GTCACTTGTGAATGTATGTGGCTTAGGAAGTTGCCCATGTCTCTGGGTGTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR GCA 90 bp | CAACACACCCAGAGACATGGGCAACTTCCTAAGCCACATACATTCACAAGTGACGCTCTCCTCAGCCGCTaGATCTTCTGCATCCTGATC | + |
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Preference number: 4 (lower is better) Translates to: QHTQRHGQLPKPHTFTSDALLSR*IFCILI Trigger: GATCAGGATGCAGAAGATGCAGCGGCTGAGGAGAGC...GTCACTTGTGAATGTATGTGGCTTAGGAAGTTGCCCATGTCTCTGGGTGTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR CCA 90 bp | CTTCGTTCTTATTTGGAAATAAAAACCCTGCATACCAAGCCCTTAACATGTTCTACGCCGTGCAGTAGGTaGCCGCGCCCTTGCTCGCCT | + |
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Preference number: 4 (lower is better) Translates to: LRSYLEIKTLHTKPLTCSTPCSR*PRPCSP Trigger: AGGCGAGCAAGGGCGCGGCCACCTACTGCACGGCGT...AGAACATGTTAAGGGCTTGGTATGCAGGGTTTTTATTTCCAAATAAGAACGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR CCA 90 bp | TCAGAGATGTCAGGAGACCCAGTATTTCTGTGGGGAGGCTATAGAAAAGATGAACCTTCTCCAGGTTCTTaGCGTTCAGCAGCTCCACGC | + |
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Preference number: 4 (lower is better) Translates to: SEMSGDPVFLWGGYRKDEPSPGS*RSAAPR Trigger: GCGTGGAGCTGCTGAACGCCAAGAACCTGGAGAAGG...TTCATCTTTTCTATAGCCTCCCCACAGAAATACTGGGTCTCCTGACATCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR GCA 90 bp | AGATTTAAATATGTCAGAGATGTCAGGAGACCCAGTATTTCTGTGGGGAGGCTACCCAGGGCTCGGTATTaGTGGAGAACTCTGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: RFKYVRDVRRPSISVGRLPRARY*WRTLPT Trigger: TGTGGGCAGAGTTCTCCAGCAATACCGAGCCCTGGG...TAGCCTCCCCACAGAAATACTGGGTCTCCTGACATCTCTGACATATTTAAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR GCA 90 bp | AGATTTAAATATGTCAGAGATGTCAGGAGACCCAGTATTTCTGTGGGGAGGCTATTCACGCATGAGAGCTaGTCCTGTGCTGCCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: RFKYVRDVRRPSISVGRLFTHES*SCAAHP Trigger: TGGATGGGCAGCACAGGAGCAGCTCTCATGCGTGAA...TAGCCTCCCCACAGAAATACTGGGTCTCCTGACATCTCTGACATATTTAAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR CCA 90 bp | CATCTGAAAGCTGAGGCAGGAAAGCAACTGTCAGGAGGTCATGCAGGTCCTGGAGTGAAGAGCTTACAGTaGCTTTTGTCATTCATGTGT | + |
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Preference number: 4 (lower is better) Translates to: HLKAEAGKQLSGGHAGPGVKSLQ*LLSFMC Trigger: ACACATGAATGACAAAAGCCACTGTAAGCTCTTCAC...TCCAGGACCTGCATGACCTCCTGACAGTTGCTTTCCTGCCTCAGCTTTCAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR CCA 90 bp | TCAGAGATGTCAGGAGACCCAGTATTTCTGTGGGGAGGCTATAGAAAAGATGAAAGCGATGACCCACTCTaGCACCAGAAGGAAGTATCA | + |
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Preference number: 4 (lower is better) Translates to: SEMSGDPVFLWGGYRKDESDDPL*HQKEVS Trigger: TGATACTTCCTTCTGGTGCCAGAGTGGGTCATCGCT...TTCATCTTTTCTATAGCCTCCCCACAGAAATACTGGGTCTCCTGACATCTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR TCA 90 bp | CTTCGTTCTTATTTGGAAATAAAAACCCTGCATACCAAGCCCTTAACATGTTCTCTGCCCACAGCCTTTTaGTTCCTAGCAACTGTCACA | + |
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Preference number: 4 (lower is better) Translates to: LRSYLEIKTLHTKPLTCSLPTAF*FLATVT Trigger: TGTGACAGTTGCTAGGAATCAAAAGGCTGTGGGCAG...AGAACATGTTAAGGGCTTGGTATGCAGGGTTTTTATTTCCAAATAAGAACGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| 3UTR CAA 72 bp | CCACTTGAAAGCTTTAAACACTGCTCAAATACGACATaGAAGACAACCATGATTTTGACTTTATTAGATCAG | + |
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Preference number: 4 (lower is better) Translates to: PLESFKHCSNTT*KTTMILTLLDQ Trigger: CTGATCTAATAAAGTCAAAATCATGGTTGTCTTCAATGTCGTATTTGAGCAGTGTTTAAAGCTTTCAAGTGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS CCA 90 bp | GCGCCCGCACCCGCTCCTGGAAGCCCTCGGCCGTCACCGGGGCCATaGCGGCCACCTTGCGCCGCAGGTTGTAGCGGTGCCAGTCCGTCT | + |
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Preference number: 5 (lower is better) Translates to: APAPAPGSPRPSPGP*RPPCAAGCSGASPS Trigger: AGACGGACTGGCACCGCTACAACCTGCGGCGCAAGGTGGCCGCCATGGCCCCGGTGACGGCCGAGGGCTTCCAGGAGCGGGTGCGGGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS GCA 90 bp | GCTCCTGGAAGCCCTCGGCCGTCACCGGGGCCATGGCGGCCACCTTaGGCCGCAGGTTGTAGCGGTGCCAGTCCGTCTTGTAGTGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: APGSPRPSPGPWRPP*AAGCSGASPSCSAP Trigger: GGGCGCACTACAAGACGGACTGGCACCGCTACAACCTGCGGCGCAAGGTGGCCGCCATGGCCCCGGTGACGGCCGAGGGCTTCCAGGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS CCA 90 bp | GGCGCTTTCTTGGGGGACGTGGAGGGCTGGGCCTTGATGGCCTGCTaGATGGCGGCGTTCACGGCGTCCTTGTCGACGCCGTCCGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: GAFLGDVEGWALMAC*MAAFTASLSTPSAP Trigger: GGGCGCGGACGGCGTCGACAAGGACGCCGTGAACGCCGCCATCCAGCAGGCCATCAAGGCCCAGCCCTCCACGTCCCCCAAGAAAGCGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS TCA 90 bp | CCAGCTCGGCGTGCCGCCGGGAGCCGAGGTGGTTCTCGTAGGCGTTaGAGGTGGCGAACTTCTTGCCGCACGCCGTGCAGTAGGTGGCCG | + |
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Preference number: 5 (lower is better) Translates to: PARRAAGSRGGSRRR*RWRTSCRTPCSRWP Trigger: CGGCCACCTACTGCACGGCGTGCGGCAAGAAGTTCGCCACCTTCAACGCCTACGAGAACCACCTCGGCTCCCGGCGGCACGCCGAGCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS CCA 90 bp | TCCCACTGCTGCTTCGCCAGCTTCTTCGCCTGCTGTTCGAACCACTaGAGCCGGGGCGGCTTCTCCGTCGGGTCTCGCTCCGGGACGCCC | + |
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Preference number: 5 (lower is better) Translates to: SHCCFASFFACCSNH*SRGGFSVGSRSGTP Trigger: GGGCGTCCCGGAGCGAGACCCGACGGAGAAGCCGCCCCGGCTCCAGTGGTTCGAACAGCAGGCGAAGAAGCTGGCGAAGCAGCAGTGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS TCA 90 bp | TGGGCACGAAGGGCGCTTTCTTGGGGGACGTGGAGGGCTGGGCCTTaGTGGCCTGCTGGATGGCGGCGTTCACGGCGTCCTTGTCGACGC | + |
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Preference number: 5 (lower is better) Translates to: WARRALSWGTWRAGP*WPAGWRRSRRPCRR Trigger: GCGTCGACAAGGACGCCGTGAACGCCGCCATCCAGCAGGCCATCAAGGCCCAGCCCTCCACGTCCCCCAAGAAAGCGCCCTTCGTGCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS CCA 90 bp | TCGTCCGTGGGCACGAAGGGCGCTTTCTTGGGGGACGTGGAGGGCTaGGCCTTGATGGCCTGCTGGATGGCGGCGTTCACGGCGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SSVGTKGAFLGDVEG*ALMACWMAAFTASL Trigger: CAAGGACGCCGTGAACGCCGCCATCCAGCAGGCCATCAAGGCCCAGCCCTCCACGTCCCCCAAGAAAGCGCCCTTCGTGCCCACGGACGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS GCA 90 bp | TCCTCCTCTCCGTCCTCCCACTGCTGCTTCGCCAGCTTCTTCGCCTaGTGTTCGAACCACTGGAGCCGGGGCGGCTTCTCCGTCGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SSSPSSHCCFASFFA*CSNHWSRGGFSVGS Trigger: AGACCCGACGGAGAAGCCGCCCCGGCTCCAGTGGTTCGAACAGCAGGCGAAGAAGCTGGCGAAGCAGCAGTGGGAGGACGGAGAGGAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS GCA 90 bp | TCTTCCTCCTCTTCCTCTCCCTCCTCCTCTCCGTCCTCCCACTGCTaGTTCGCCAGCTTCTTCGCCTGCTGTTCGAACCACTGGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: SSSSSSPSSSPSSHC*FASFFACCSNHWSR Trigger: CCGGCTCCAGTGGTTCGAACAGCAGGCGAAGAAGCTGGCGAAGCAGCAGTGGGAGGACGGAGAGGAGGAGGGAGAGGAAGAGGAGGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS GCA 90 bp | TCGTCTTCCTCCTCTTCCTCTCCCTCCTCCTCTCCGTCCTCCCACTaGTGCTTCGCCAGCTTCTTCGCCTGCTGTTCGAACCACTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: SSSSSSSPSSSPSSH*CFASFFACCSNHWS Trigger: GCTCCAGTGGTTCGAACAGCAGGCGAAGAAGCTGGCGAAGCAGCAGTGGGAGGACGGAGAGGAGGAGGGAGAGGAAGAGGAGGAAGACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS GCA 90 bp | TTTCATCCTCTGCACATATTGCATGTCCCGTTCACGCATGAGAGCTaGTCCTGTGCTGCCCATCCACCCCAGGGCTCGGTATTGCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: FHPLHILHVPFTHES*SCAAHPPQGSVLLE Trigger: CTCCAGCAATACCGAGCCCTGGGGTGGATGGGCAGCACAGGAGCAGCTCTCATGCGTGAACGGGACATGCAATATGTGCAGAGGATGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061875.8 ENSMUST00000226884.2 |
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| CDS-3UTR CAA 90 bp | AGGTCCTGGAGCCCAACAAGCAAGCCCAAGCTTCACATCCGTCCCCACTTGAAATCTTCACGAGGGAGCTaGAATGATGGGAGCAAAACA | + |
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Preference number: 5 (lower is better) Translates to: RSWSPTSKPKLHIRPHLKSSRGS*NDGSKT Trigger: TGTTTTGCTCCCATCATTCAAGCTCCCTCGTGAAGA...TTTCAAGTGGGGACGGATGTGAAGCTTGGGCTTGCTTGTTGGGCTCCAGGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR CAA 90 bp | TCAGAGATGTCAGGAGACCCAGTATTTCTGTGGGGAGGCTATAGAAAAGATGAAACAAGCAGTCTGTTATaGGGATGGCACCTAGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: SEMSGDPVFLWGGYRKDETSSLL*GWHLGV Trigger: CACCCCTAGGTGCCATCCCAATAACAGACTGCTTGT...TTCATCTTTTCTATAGCCTCCCCACAGAAATACTGGGTCTCCTGACATCTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR CAA 90 bp | CTTCGTTCTTATTTGGAAATAAAAACCCTGCATACCAAGCCCTTAACATGTTCTCCCCAGGGCTCGGTATaGCTGGAGAACTCTGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: LRSYLEIKTLHTKPLTCSPQGSV*LENSAH Trigger: GTGGGCAGAGTTCTCCAGCAATACCGAGCCCTGGGG...AGAACATGTTAAGGGCTTGGTATGCAGGGTTTTTATTTCCAAATAAGAACGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS-3UTR CAA 90 bp | AGAGACATGGGCAACTTCCTAAGCCACATACATTCACAAGTGACATTCAGTTTTAGCTTACAGTGGCTTTaGTCATTCATGTGTGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: RDMGNFLSHIHSQVTFSFSLQWL*SFMCAC Trigger: ACAGGCACACATGAATGACAAAAGCCACTGTAAGCT...AAAACTGAATGTCACTTGTGAATGTATGTGGCTTAGGAAGTTGCCCATGTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS CCA 72 bp | CCCGCTCCTGGAAGCCCTCGGCCGTCACCGGGGCCATaGCGGCCACCTTGCGCCGCAGGTTGTAGCGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: PAPGSPRPSPGP*RPPCAAGCSGA Trigger: GGCACCGCTACAACCTGCGGCGCAAGGTGGCCGCCATGGCCCCGGTGACGGCCGAGGGCTTCCAGGAGCGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS CAA 72 bp | TCGACGCCGTCCGCGCCCAGCCCCTTCTCCAGGTTCTaGGCGTTCAGCAGCTCCACGCGCCGGCTCGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: STPSAPSPFSRF*AFSSSTRRLAA Trigger: GGCCGCGAGCCGGCGCGTGGAGCTGCTGAACGCCAAGAACCTGGAGAAGGGGCTGGGCGCGGACGGCGTCGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS CCA 72 bp | AGGTGGCGAACTTCTTGCCGCACGCCGTGCAGTAGGTaGCCGCGCCCTTGCTCGCCTCCGCCGCCTCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RWRTSCRTPCSR*PRPCSPPPPRP Trigger: TGGCCGAGGCGGCGGAGGCGAGCAAGGGCGCGGCCACCTACTGCACGGCGTGCGGCAAGAAGTTCGCCACCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS CAA 90 bp | GGCTGGGCCTTGATGGCCTGCTGGATGGCGGCGTTCACGGCGTCCTaGTCGACGCCGTCCGCGCCCAGCCCCTTCTCCAGGTTCTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: GWALMACWMAAFTAS*STPSAPSPFSRFLA Trigger: CGCCAAGAACCTGGAGAAGGGGCTGGGCGCGGACGGCGTCGACAAGGACGCCGTGAACGCCGCCATCCAGCAGGCCATCAAGGCCCAGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS CAA 72 bp | TTGATGGCCTGCTGGATGGCGGCGTTCACGGCGTCCTaGTCGACGCCGTCCGCGCCCAGCCCCTTCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LMACWMAAFTAS*STPSAPSPFSR Trigger: CCTGGAGAAGGGGCTGGGCGCGGACGGCGTCGACAAGGACGCCGTGAACGCCGCCATCCAGCAGGCCATCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS CAA 72 bp | CTCCCGCACTCGTCCGTGGGCACGAAGGGCGCTTTCTaGGGGGACGTGGAGGGCTGGGCCTTGATGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LPHSSVGTKGAF*GDVEGWALMAC Trigger: GCAGGCCATCAAGGCCCAGCCCTCCACGTCCCCCAAGAAAGCGCCCTTCGTGCCCACGGACGAGTGCGGGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS CAA 90 bp | GTGGGCACGAAGGGCGCTTTCTTGGGGGACGTGGAGGGCTGGGCCTaGATGGCCTGCTGGATGGCGGCGTTCACGGCGTCCTTGTCGACG | + |
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Preference number: 6 (lower is better) Translates to: VGTKGAFLGDVEGWA*MACWMAAFTASLST Trigger: CGTCGACAAGGACGCCGTGAACGCCGCCATCCAGCAGGCCATCAAGGCCCAGCCCTCCACGTCCCCCAAGAAAGCGCCCTTCGTGCCCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS TCA 72 bp | CGTGCCGCCGGGAGCCGAGGTGGTTCTCGTAGGCGTTaGAGGTGGCGAACTTCTTGCCGCACGCCGTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: RAAGSRGGSRRR*RWRTSCRTPCS Trigger: ACTGCACGGCGTGCGGCAAGAAGTTCGCCACCTTCAACGCCTACGAGAACCACCTCGGCTCCCGGCGGCACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS CCA 72 bp | TGCTTCGCCAGCTTCTTCGCCTGCTGTTCGAACCACTaGAGCCGGGGCGGCTTCTCCGTCGGGTCTCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: CFASFFACCSNH*SRGGFSVGSRS Trigger: GGAGCGAGACCCGACGGAGAAGCCGCCCCGGCTCCAGTGGTTCGAACAGCAGGCGAAGAAGCTGGCGAAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS GCA 72 bp | TCTTCCTCTCCCTCCTCCTCTCCGTCCTCCCACTGCTaGTTCGCCAGCTTCTTCGCCTGCTGTTCGAACCAC | + |
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Preference number: 6 (lower is better) Translates to: SSSPSSSPSSHC*FASFFACCSNH Trigger: GTGGTTCGAACAGCAGGCGAAGAAGCTGGCGAAGCAGCAGTGGGAGGACGGAGAGGAGGAGGGAGAGGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS GCA 72 bp | TCCTCTTCCTCTCCCTCCTCCTCTCCGTCCTCCCACTaGTGCTTCGCCAGCTTCTTCGCCTGCTGTTCGAAC | + |
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Preference number: 6 (lower is better) Translates to: SSSSPSSSPSSH*CFASFFACCSN Trigger: GTTCGAACAGCAGGCGAAGAAGCTGGCGAAGCAGCAGTGGGAGGACGGAGAGGAGGAGGGAGAGGAAGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061875.8 |
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| CDS GCA 72 bp | CTGCACATATTGCATGTCCCGTTCACGCATGAGAGCTaGTCCTGTGCTGCCCATCCACCCCAGGGCTCGGTA | + |
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Preference number: 6 (lower is better) Translates to: LHILHVPFTHES*SCAAHPPQGSV Trigger: TACCGAGCCCTGGGGTGGATGGGCAGCACAGGAGCAGCTCTCATGCGTGAACGGGACATGCAATATGTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061875.8 ENSMUST00000226884.2 |
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| CDS TCA 72 bp | TCATCCTCTGCACATATTGCATGTCCCGTTCACGCATaGGAGCTGCTCCTGTGCTGCCCATCCACCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SSSAHIACPVHA*ELLLCCPSTPG Trigger: CCCTGGGGTGGATGGGCAGCACAGGAGCAGCTCTCATGCGTGAACGGGACATGCAATATGTGCAGAGGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061875.8 ENSMUST00000226884.2 |
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