Pregenerated sensors for ZFP62 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046311Ensembl transcript IDs: ENSMUST00000061757.4, ENSMUST00000109197.8, ENSMUST00000109198.8, ENSMUST00000136539.2, ENSMUST00000151228.2, ENSMUST00000180016.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTAAACCATCCTCTCCCTaGATTTGCCTGTTGGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPKPSSP*ICLLEA Trigger: GGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTT...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGAAACCATCCTCTCCCTaGATTTGCCTGTTGGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: IQSVSEVVIFLPQTITVKKPSSP*ICLLEA Trigger: GGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTT...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGCCTGAATTTGCCTGTTaGAGGCCCTTCTTGGATCTT | + |
|
Preference number: 2 (lower is better) Translates to: IQSVSEVVIFLPQTITVKPEFAC*RPFLDL Trigger: AAGATCCAAGAAGGGCCTCCAACAGGCAAATTCAGG...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTGACCCACTAATAAACTaGTATTCCCTGAAACCATCC | + |
|
Preference number: 2 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPDPLIN*YSLKPS Trigger: GGATGGTTTCAGGGAATATCAGTTTATTAGTGGGTC...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGCCTGAATTTGCCTGTTaGAGGCCCTTCTTGGATCTT | + |
|
Preference number: 2 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKPEFAC*RPFLDL Trigger: AAGATCCAAGAAGGGCCTCCAACAGGCAAATTCAGG...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGGACCCACTAATAAACTaGTATTCCCTGAAACCATCC | + |
|
Preference number: 2 (lower is better) Translates to: IQSVSEVVIFLPQTITVKDPLIN*YSLKPS Trigger: GGATGGTTTCAGGGAATATCAGTTTATTAGTGGGTC...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTATCCTCTCCCTGAATTaGCCTGTTGGAGGCCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPILSLN*PVGGPS Trigger: AGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGAT...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGATCCTCTCCCTGAATTaGCCTGTTGGAGGCCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: IQSVSEVVIFLPQTITVKILSLN*PVGGPS Trigger: AGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGAT...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGATCCTCTCCCTGAATTaGCCTGTTGGAGGCCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKILSLN*PVGGPS Trigger: AGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGAT...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGTCCCACACAGGCATCTaGATTCTGGTCCCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWSHTGI*ILVPSR Trigger: TCTGGATGGGACCAGAATGCAGATGCCTGTGTGGGA...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGGTATGGATGCGCTTGTaGACTCGAAGACTGGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWVWMRL*TRRLEL Trigger: TAGCTCCAGTCTTCGAGTCCACAAGCGCATCCATAC...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGGGCTTGAGTTGTTTCTaGAGACCTTCTCACACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWGLSCF*RPSHTC Trigger: ACAGGTGTGAGAAGGTCTTCAGAAACAACTCAAGCC...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGGGCCAGAACTATTACTaGAGGTTTTCCCACAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWGQNYY*RFSHRY Trigger: ATACCTGTGGGAAAACCTTCAGTAATAGTTCTGGCC...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGATGGACTGCAAGGCCTaGACTATAGCTGAATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWMDCKA*TIAECF Trigger: AAAGCATTCAGCTATAGTTCAGGCCTTGCAGTCCAT...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGGACCTGAATTGTTCCTaGACGTTTTGCCACACACAT | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWDLNCS*TFCHTH Trigger: ATGTGTGTGGCAAAACGTTCAGGAACAATTCAGGTC...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGGTGGGGATAGTCTGGTaGATTGTATTTGTACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWVGIVW*IVFVLG Trigger: CCCAAGTACAAATACAATGCACCAGACTATCCCCAC...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCTCCCACACAGGCATCTaGATTCTGGTCCCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NKLIFPETILSLNLPVGGSHTGI*ILVPSR Trigger: TCTGGATGGGACCAGAATGCAGATGCCTGTGTGGGA...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGGTGTGGATCCTTTTATaGTGGTCCAGAACAGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWVWILL*WSRTEL Trigger: TAGTTCTGTTCTGGACCAGCATAAAAGGATCCACAC...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGTCTTTCCAGGATGAATaGTTTTATGGACTGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWSFQDE*FYGLQG Trigger: GCCTTGCAGTCCATAAAAGCATTCATCCTGGAAAGA...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCGTATGGATGCGCTTGTaGACTCGAAGACTGGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NKLIFPETILSLNLPVGGVWMRL*TRRLEL Trigger: TAGCTCCAGTCTTCGAGTCCACAAGCGCATCCATAC...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGGGCTTTTCCCCAAGATaGACTCTCTTATGGCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWGFSPR*TLLWLI Trigger: TATAAGCCATAAGAGAGTCCATCTTGGGGAAAAGCC...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCAGGCATCTGCATTCTaGTCCCATCCAGAGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: NKLIFPETILSLNLPVGGQASAF*SHPENS Trigger: GGAATTCTCTGGATGGGACCAGAATGCAGATGCCTG...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGGTGCTTGGTAAGGTTTaGCCTGATATTAAATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWVLGKV*PDIKCL Trigger: AAGGCATTTAATATCAGGTCAAACCTTACCAAGCAC...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGTGGAATGTGCCACTATaGCTTTCCATATTTGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWWNVPL*LSIFAI Trigger: TATGGCAAATATGGAAAGTCATAGTGGCACATTCCA...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGGACGAGAATTGTATTTaGAGGATTTTCCACACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWDENCI*RIFHTH Trigger: ATGAGTGTGGAAAATCCTTCAAATACAATTCTCGTC...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCGGCCAGAACTATTACTaGAGGTTTTCCCACAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NKLIFPETILSLNLPVGGGQNYY*RFSHRY Trigger: ATACCTGTGGGAAAACCTTCAGTAATAGTTCTGGCC...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCATGGACTGCAAGGCCTaGACTATAGCTGAATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NKLIFPETILSLNLPVGGMDCKA*TIAECF Trigger: AAAGCATTCAGCTATAGTTCAGGCCTTGCAGTCCAT...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGATGAACTTTGAGACCTaGATTGTTCCTGAACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWMNFET*IVPERF Trigger: AAAACGTTCAGGAACAATTCAGGTCTCAAAGTTCAT...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGGGGTGTACACTTTTATaGTTTATAAGGCTTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWGCTLL*FIRLES Trigger: ACTCTCAAGCCTTATAAATCATAAAAGTGTACACCC...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGCGGTGGACACTTTTATaGTTAATAAGACTTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWRWTLL*LIRLEC Trigger: ACACTCAAGTCTTATTAATCATAAAAGTGTCCACCG...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTTCCCACACAGGCATCTaGATTCTGGTCCCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPSHTGI*ILVPSR Trigger: TCTGGATGGGACCAGAATGCAGATGCCTGTGTGGGA...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTGGCTTTTCCCCAGTATaGATGCGCTTGTGGACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPGFSPV*MRLWTR Trigger: TCGAGTCCACAAGCGCATCCATACTGGGGAAAAGCC...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGGGGTGTGTACTTTTATaGTTAATAAGGCTTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWGCVLL*LIRLEC Trigger: ACACTCAAGCCTTATTAACCATAAAAGTACACACCC...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGAGATGGACTCTCTTATaGCTTATAAGAGTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWRWTLL*LIRVLL Trigger: AAGCAGAACTCTTATAAGCCATAAGAGAGTCCATCT...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCGGGCAGAACTGTAGTTaGAAGATTTCTCACAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: NKLIFPETILSLNLPVGGGQNCS*KISHNS Trigger: GCTATTGTGAGAAATCTTTCAACTACAGTTCTGCCC...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGGATGTCTCATCATCCTaGTCTAGTTTTATATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IFPETILSLNLPVGGPSWDVSSS*SSFIFA Trigger: AGCAAATATAAAACTAGAGCAGGATGATGAGACATC...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCGTGTGGATCCTTTTATaGTGGTCCAGAACAGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: NKLIFPETILSLNLPVGGVWILL*WSRTEL Trigger: TAGTTCTGTTCTGGACCAGCATAAAAGGATCCACAC...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCTCTTTCCAGGATGAATaGTTTTATGGACTGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NKLIFPETILSLNLPVGGSFQDE*FYGLQG Trigger: GCCTTGCAGTCCATAAAAGCATTCATCCTGGAAAGA...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGTCCCACACAGGCATCTaGATTCTGGTCCCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IQSVSEVVIFLPQTITVKSHTGI*ILVPSR Trigger: TCTGGATGGGACCAGAATGCAGATGCCTGTGTGGGA...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCGGCTTTTCCCCAAGATaGACTCTCTTATGGCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: NKLIFPETILSLNLPVGGGFSPR*TLLWLI Trigger: TATAAGCCATAAGAGAGTCCATCTTGGGGAAAAGCC...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTCAGGCATCTGCATTCTaGTCCCATCCAGAGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPQASAF*SHPENS Trigger: GGAATTCTCTGGATGGGACCAGAATGCAGATGCCTG...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCTTCTTCTCCCCAGAATaGGTGCTTTTGTGGTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: NKLIFPETILSLNLPVGGFFSPE*VLLWFI Trigger: TATAAACCACAAAAGCACTCATTCTGGGGAGAAGAA...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCATGTGGATTCCTTTGTaGTTTTTAAGGCTTGAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: NKLIFPETILSLNLPVGGMWIPL*FLRLER Trigger: ACGCTCAAGCCTTAAAAATCACAAAGGAATCCACAT...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTGGCTTGAGTTGTTTCTaGAGACCTTCTCACACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPGLSCF*RPSHTC Trigger: ACAGGTGTGAGAAGGTCTTCAGAAACAACTCAAGCC...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGGTATGGATGCGCTTGTaGACTCGAAGACTGGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: IQSVSEVVIFLPQTITVKVWMRL*TRRLEL Trigger: TAGCTCCAGTCTTCGAGTCCACAAGCGCATCCATAC...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTGATTTCTTTGAGACTTaGCATGCTCTGCCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPDFFET*HALPPT Trigger: TGTGGGAGGCAGAGCATGCCAAGTCTCAAAGAAATC...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCGGGTGTACACTTTTATaGTTTATAAGGCTTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NKLIFPETILSLNLPVGGGCTLL*FIRLES Trigger: ACTCTCAAGCCTTATAAATCATAAAAGTGTACACCC...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCGTGTTGAGAAAGGAGTaGGGTGTAGTTAAAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: NKLIFPETILSLNLPVGGVLRKE*GVVKRF Trigger: AAATCTTTTAACTACACCTCACTCCTTTCTCAACAC...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTGTGGGGATAGTCTGGTaGATTGTATTTGTACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPVGIVW*IVFVLG Trigger: CCCAAGTACAAATACAATGCACCAGACTATCCCCAC...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGGTATGGATGCGCTTGTaGACTCGAAGACTGGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKVWMRL*TRRLEL Trigger: TAGCTCCAGTCTTCGAGTCCACAAGCGCATCCATAC...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCAGATGGACTCTCTTATaGCTTATAAGAGTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKLIFPETILSLNLPVGGRWTLL*LIRVLL Trigger: AAGCAGAACTCTTATAAGCCATAAGAGAGTCCATCT...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGCAGGCATCTGCATTCTaGTCCCATCCAGAGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKQASAF*SHPENS Trigger: GGAATTCTCTGGATGGGACCAGAATGCAGATGCCTG...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGGATTTCTTTGAGACTTaGCATGCTCTGCCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: IQSVSEVVIFLPQTITVKDFFET*HALPPT Trigger: TGTGGGAGGCAGAGCATGCCAAGTCTCAAAGAAATC...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGGGCCAGAACTATTACTaGAGGTTTTCCCACAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IQSVSEVVIFLPQTITVKGQNYY*RFSHRY Trigger: ATACCTGTGGGAAAACCTTCAGTAATAGTTCTGGCC...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGATGGACTGCAAGGCCTaGACTATAGCTGAATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IQSVSEVVIFLPQTITVKMDCKA*TIAECF Trigger: AAAGCATTCAGCTATAGTTCAGGCCTTGCAGTCCAT...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGGGCTTGAGTTGTTTCTaGAGACCTTCTCACACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKGLSCF*RPSHTC Trigger: ACAGGTGTGAGAAGGTCTTCAGAAACAACTCAAGCC...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTTCTTTCCAGGATGAATaGTTTTATGGACTGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPSFQDE*FYGLQG Trigger: GCCTTGCAGTCCATAAAAGCATTCATCCTGGAAAGA...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTGGCTTTTCCCCAAGATaGACTCTCTTATGGCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPGFSPR*TLLWLI Trigger: TATAAGCCATAAGAGAGTCCATCTTGGGGAAAAGCC...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGGATTTCTTTGAGACTTaGCATGCTCTGCCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKDFFET*HALPPT Trigger: TGTGGGAGGCAGAGCATGCCAAGTCTCAAAGAAATC...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGATGGACTGCAAGGCCTaGACTATAGCTGAATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKMDCKA*TIAECF Trigger: AAAGCATTCAGCTATAGTTCAGGCCTTGCAGTCCAT...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGGACCTGAATTGTTCCTaGACGTTTTGCCACACACAT | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKDLNCS*TFCHTH Trigger: ATGTGTGTGGCAAAACGTTCAGGAACAATTCAGGTC...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTATGTGGATTCCTTTGTaGTTTTTAAGGCTTGAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPMWIPL*FLRLER Trigger: ACGCTCAAGCCTTAAAAATCACAAAGGAATCCACAT...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGGGGCAGAACTGTAGTTaGAAGATTTCTCACAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: IQSVSEVVIFLPQTITVKGQNCS*KISHNS Trigger: GCTATTGTGAGAAATCTTTCAACTACAGTTCTGCCC...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTGTGCTTGGTAAGGTTTaGCCTGATATTAAATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPVLGKV*PDIKCL Trigger: AAGGCATTTAATATCAGGTCAAACCTTACCAAGCAC...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTTGGAATGTGCCACTATaGCTTTCCATATTTGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPWNVPL*LSIFAI Trigger: TATGGCAAATATGGAAAGTCATAGTGGCACATTCCA...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGTCTTTCCAGGATGAATaGTTTTATGGACTGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IQSVSEVVIFLPQTITVKSFQDE*FYGLQG Trigger: GCCTTGCAGTCCATAAAAGCATTCATCCTGGAAAGA...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGGGCTTTTCCCCAAGATaGACTCTCTTATGGCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: IQSVSEVVIFLPQTITVKGFSPR*TLLWLI Trigger: TATAAGCCATAAGAGAGTCCATCTTGGGGAAAAGCC...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTATGAACTTTGAGACCTaGATTGTTCCTGAACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPMNFET*IVPERF Trigger: AAAACGTTCAGGAACAATTCAGGTCTCAAAGTTCAT...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTGTGTTGAGAAAGGAGTaGGGTGTAGTTAAAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPVLRKE*GVVKRF Trigger: AAATCTTTTAACTACACCTCACTCCTTTCTCAACAC...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGGTGCTTGGTAAGGTTTaGCCTGATATTAAATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IQSVSEVVIFLPQTITVKVLGKV*PDIKCL Trigger: AAGGCATTTAATATCAGGTCAAACCTTACCAAGCAC...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGTGGAATGTGCCACTATaGCTTTCCATATTTGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: IQSVSEVVIFLPQTITVKWNVPL*LSIFAI Trigger: TATGGCAAATATGGAAAGTCATAGTGGCACATTCCA...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGGTGTGGATCCTTTTATaGTGGTCCAGAACAGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKVWILL*WSRTEL Trigger: TAGTTCTGTTCTGGACCAGCATAAAAGGATCCACAC...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTGGGTGTGTACTTTTATaGTTAATAAGGCTTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPGCVLL*LIRLEC Trigger: ACACTCAAGCCTTATTAACCATAAAAGTACACACCC...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTAGATGGACTCTCTTATaGCTTATAAGAGTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPRWTLL*LIRVLL Trigger: AAGCAGAACTCTTATAAGCCATAAGAGAGTCCATCT...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGGACGAGAATTGTATTTaGAGGATTTTCCACACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IQSVSEVVIFLPQTITVKDENCI*RIFHTH Trigger: ATGAGTGTGGAAAATCCTTCAAATACAATTCTCGTC...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGTTCTTCTCCCCAGAATaGGTGCTTTTGTGGTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKFFSPE*VLLWFI Trigger: TATAAACCACAAAAGCACTCATTCTGGGGAGAAGAA...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGATGTGGATTCCTTTGTaGTTTTTAAGGCTTGAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKMWIPL*FLRLER Trigger: ACGCTCAAGCCTTAAAAATCACAAAGGAATCCACAT...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGGGGTGTACACTTTTATaGTTTATAAGGCTTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IQSVSEVVIFLPQTITVKGCTLL*FIRLES Trigger: ACTCTCAAGCCTTATAAATCATAAAAGTGTACACCC...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGGTGTTGAGAAAGGAGTaGGGTGTAGTTAAAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: IQSVSEVVIFLPQTITVKVLRKE*GVVKRF Trigger: AAATCTTTTAACTACACCTCACTCCTTTCTCAACAC...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGCGGTGGACACTTTTATaGTTAATAAGACTTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IQSVSEVVIFLPQTITVKRWTLL*LIRLEC Trigger: ACACTCAAGTCTTATTAATCATAAAAGTGTCCACCG...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTGATGTCTCATCATCCTaGTCTAGTTTTATATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPDVSSS*SSFIFA Trigger: AGCAAATATAAAACTAGAGCAGGATGATGAGACATC...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTTTAATGTTCTCTGTGTaGTCACCTTGTTTAGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPLMFSV*SPCLVQ Trigger: TTGTACTAAACAAGGTGAGCACACAGAGAACATTAA...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGGACGAGAATTGTATTTaGAGGATTTTCCACACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKDENCI*RIFHTH Trigger: ATGAGTGTGGAAAATCCTTCAAATACAATTCTCGTC...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGATGAACTTTGAGACCTaGATTGTTCCTGAACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKMNFET*IVPERF Trigger: AAAACGTTCAGGAACAATTCAGGTCTCAAAGTTCAT...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGGGGTGTACACTTTTATaGTTTATAAGGCTTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKGCTLL*FIRLES Trigger: ACTCTCAAGCCTTATAAATCATAAAAGTGTACACCC...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGGTGTTGAGAAAGGAGTaGGGTGTAGTTAAAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKVLRKE*GVVKRF Trigger: AAATCTTTTAACTACACCTCACTCCTTTCTCAACAC...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGCGGTGGACACTTTTATaGTTAATAAGACTTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKRWTLL*LIRLEC Trigger: ACACTCAAGTCTTATTAATCATAAAAGTGTCCACCG...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGGGGTGTGTACTTTTATaGTTAATAAGGCTTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKGCVLL*LIRLEC Trigger: ACACTCAAGCCTTATTAACCATAAAAGTACACACCC...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGGATGTCTCATCATCCTaGTCTAGTTTTATATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKDVSSS*SSFIFA Trigger: AGCAAATATAAAACTAGAGCAGGATGATGAGACATC...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGTTAATGTTCTCTGTGTaGTCACCTTGTTTAGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKLMFSV*SPCLVQ Trigger: TTGTACTAAACAAGGTGAGCACACAGAGAACATTAA...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGCCTGTATGGATCCTTTaGTGGACCCTCAGGCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: IFPETILSLNLPVGGPSWPVWIL*WTLRPE Trigger: TTCTGGCCTGAGGGTCCACAAAAGGATCCATACAGG...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTGTATGGATCCTTTaGTGGACCCTCAGGCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NKLIFPETILSLNLPVGGPVWIL*WTLRPE Trigger: TTCTGGCCTGAGGGTCCACAAAAGGATCCATACAGG...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGCTCTGTGTGCTCACCTaGTTTAGTACAATTTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IFPETILSLNLPVGGPSWLCVLT*FSTIWF Trigger: GAACCAAATTGTACTAAACAAGGTGAGCACACAGAG...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGACTTTGAGACCTGAATaGTTCCTGAACGTTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IFPETILSLNLPVGGPSWTLRPE*FLNVLP Trigger: TGGCAAAACGTTCAGGAACAATTCAGGTCTCAAAGT...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTGTGTGGATCCTCTaGTGTTGGGAAAGAAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NKLIFPETILSLNLPVGGPVWIL*CWERSE Trigger: CTCACTTCTTTCCCAACACAAGAGGATCCACACAGG...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGTTCTATTTGATTTCTTaGAGACTTGGCATGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IFPETILSLNLPVGGPSWFYLIS*RLGMLC Trigger: GCAGAGCATGCCAAGTCTCAAAGAAATCAAATAGAA...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGTCTCTGATACTACTTTaGCCTTCCTTCAGTATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IFPETILSLNLPVGGPSWSLILL*PSFSIF Trigger: GAAAATACTGAAGGAAGGCAAAAGTAGTATCAGAGA...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGGCTCTAGTTTTATATTaGCTGCGTTTGTATGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: IFPETILSLNLPVGGPSWALVLY*LRLYVC Trigger: ACACACATACAAACGCAGCAAATATAAAACTAGAGC...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGGCATTGTATTTGTACTaGGGTAGAAACTTTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: IFPETILSLNLPVGGPSWALYLY*GRNFSQ Trigger: CTGAGAAAAGTTTCTACCCAAGTACAAATACAATGC...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGAGACGAGAATTGTATTaGAAGGATTTTCCACACTCA | + |
|
Preference number: 5 (lower is better) Translates to: IFPETILSLNLPVGGPSWRRELY*KDFPHS Trigger: TGAGTGTGGAAAATCCTTCAAATACAATTCTCGTCT...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCCCTTCTTGGATGAATCCTTTTATGTaGTTCAAGGGCAGAACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IFPETILSLNLPVGGPSWMNPFM*FKGRTV Trigger: TACAGTTCTGCCCTTGAACAACATAAAAGGATTCAT...CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS GCA 90 bp | ATAAAGTTTTTCTTCTATTTGATTTCTTTGAGACTTGGCATGCTCTaGCTCCCACACAGGCATCTGCATTCTGGTCCCATCCAGAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: IKFFFYLISLRLGML*LPHRHLHSGPIQRI Trigger: AATTCTCTGGATGGGACCAGAATGCAGATGCCTGTGTGGGAGGCAGAGCATGCCAAGTCTCAAAGAAATCAAATAGAAGAAAAACTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGCCTGTGTGGATCCTCTaGTGTTGGGAAAGAAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: IQSVSEVVIFLPQTITVKPVWIL*CWERSE Trigger: CTCACTTCTTTCCCAACACAAGAGGATCCACACAGG...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCGTGGATTCTTTTATGTaGGTCAAGGACAGATCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: NKLIFPETILSLNLPVGGVDSFM*VKDRSV Trigger: TACAGATCTGTCCTTGACCAACATAAAAGAATCCAC...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCTTCTATTTGATTTCTTaGAGACTTGGCATGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NKLIFPETILSLNLPVGGFYLIS*RLGMLC Trigger: GCAGAGCATGCCAAGTCTCAAAGAAATCAAATAGAA...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCTCTCTGATACTACTTTaGCCTTCCTTCAGTATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NKLIFPETILSLNLPVGGSLILL*PSFSIF Trigger: GAAAATACTGAAGGAAGGCAAAAGTAGTATCAGAGA...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | AATAAACTGATATTCCCTGAAACCATCCTCTCCCTGAATTTGCCTGTTGGAGGCGCTCTAGTTTTATATTaGCTGCGTTTGTATGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NKLIFPETILSLNLPVGGALVLY*LRLYVC Trigger: ACACACATACAAACGCAGCAAATATAAAACTAGAGC...GCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGAATATCAGTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS GCA 90 bp | CATCCAGAGAATTCCCTCCCTCATAGTAGATCATCTTCTGGAATGTaGCACTATGACTTTCCATATTTGCCATATTTAAAGATTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HPENSLPHSRSSSGM*HYDFPYLPYLKIPL Trigger: GAGAGGAATCTTTAAATATGGCAAATATGGAAAGTCATAGTGGCACATTCCAGAAGATGATCTACTATGAGGGAGGGAATTCTCTGGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000136539.2 ENSMUST00000180016.2 |
||
| CDS CCA 90 bp | GTTTCCATTAATGTTCTCTGTGTGCTCACCTTGTTTAGTACAATTTaGTTCTGTGGGGATAGTCTGGTGCATTGTATTTGTACTTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VSINVLCVLTLFSTI*FCGDSLVHCICTWV Trigger: TACCCAAGTACAAATACAATGCACCAGACTATCCCCACAGAACCAAATTGTACTAAACAAGGTGAGCACACAGAGAACATTAATGGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000136539.2 ENSMUST00000151228.2 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTCTCTGTGTGCTCACCTaGTTTAGTACAATTTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPLCVLT*FSTIWF Trigger: GAACCAAATTGTACTAAACAAGGTGAGCACACAGAG...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGACTTTGAGACCTGAATaGTTCCTGAACGTTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IQSVSEVVIFLPQTITVKTLRPE*FLNVLP Trigger: TGGCAAAACGTTCAGGAACAATTCAGGTCTCAAAGT...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTTTCTATTTGATTTCTTaGAGACTTGGCATGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPFYLIS*RLGMLC Trigger: GCAGAGCATGCCAAGTCTCAAAGAAATCAAATAGAA...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTGCATTGTATTTGTACTaGGGTAGAAACTTTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPALYLY*GRNFSQ Trigger: CTGAGAAAAGTTTCTACCCAAGTACAAATACAATGC...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGCTCTGTGTGCTCACCTaGTTTAGTACAATTTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKLCVLT*FSTIWF Trigger: GAACCAAATTGTACTAAACAAGGTGAGCACACAGAG...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTAGACGAGAATTGTATTaGAAGGATTTTCCACACTCA | + |
|
Preference number: 5 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPRRELY*KDFPHS Trigger: TGAGTGTGGAAAATCCTTCAAATACAATTCTCGTCT...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGACTTTGAGACCTGAATaGTTCCTGAACGTTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKTLRPE*FLNVLP Trigger: TGGCAAAACGTTCAGGAACAATTCAGGTCTCAAAGT...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTTTCTTTTCCTAGGACATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTATGAATCCTTTTATGTaGTTCAAGGGCAGAACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: MPFLFLGHPKCFRSCDLPMNPFM*FKGRTV Trigger: TACAGTTCTGCCCTTGAACAACATAAAAGGATTCAT...AGGAAGATCACAACTTCTGAAACACTTTGGATGTCCTAGGAAAAGAAAAGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGGCATTGTATTTGTACTaGGGTAGAAACTTTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: IQSVSEVVIFLPQTITVKALYLY*GRNFSQ Trigger: CTGAGAAAAGTTTCTACCCAAGTACAAATACAATGC...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | ATCCAAAGTGTTTCAGAAGTTGTGATCTTCCTACCACAAACCATTACTGTTAAGATGAATCCTTTTATGTaGTTCAAGGGCAGAACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IQSVSEVVIFLPQTITVKMNPFM*FKGRTV Trigger: TACAGTTCTGCCCTTGAACAACATAAAAGGATTCAT...CTTAACAGTAATGGTTTGTGGTAGGAAGATCACAACTTCTGAAACACTTTGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGGTGGATTCTTTTATGTaGGTCAAGGACAGATCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKVDSFM*VKDRSV Trigger: TACAGATCTGTCCTTGACCAACATAAAAGAATCCAC...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGTCTCTGATACTACTTTaGCCTTCCTTCAGTATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKSLILL*PSFSIF Trigger: GAAAATACTGAAGGAAGGCAAAAGTAGTATCAGAGA...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGAGACGAGAATTGTATTaGAAGGATTTTCCACACTCA | + |
|
Preference number: 5 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKRRELY*KDFPHS Trigger: TGAGTGTGGAAAATCCTTCAAATACAATTCTCGTCT...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGTGATTATGTCACAGATTATGCCTTTTCTTTTCCTAGGACATCCAAAGATGAATCCTTTTATGTaGTTCAAGGGCAGAACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: FEVIMSQIMPFLFLGHPKMNPFM*FKGRTV Trigger: TACAGTTCTGCCCTTGAACAACATAAAAGGATTCAT...CTTTGGATGTCCTAGGAAAAGAAAAGGCATAATCTGTGACATAATCACTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS GCA 72 bp | TTCTTCTATTTGATTTCTTTGAGACTTGGCATGCTCTaGCTCCCACACAGGCATCTGCATTCTGGTCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: FFYLISLRLGML*LPHRHLHSGPI Trigger: GATGGGACCAGAATGCAGATGCCTGTGTGGGAGGCAGAGCATGCCAAGTCTCAAAGAAATCAAATAGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000180016.2 |
||
| CDS CAA 90 bp | ATGAGCAGGGTGTACGTTTCCATTAATGTTCTCTGTGTGCTCACCTaGTTTAGTACAATTTGGTTCTGTGGGGATAGTCTGGTGCATTGT | + |
|
Preference number: 6 (lower is better) Translates to: MSRVYVSINVLCVLT*FSTIWFCGDSLVHC Trigger: ACAATGCACCAGACTATCCCCACAGAACCAAATTGTACTAAACAAGGTGAGCACACAGAGAACATTAATGGAAACGTACACCCTGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000136539.2 ENSMUST00000151228.2 ENSMUST00000180016.2 |
||
| CDS CCA 72 bp | TTCTGTGGGGATAGTCTGGTGCATTGTATTTGTACTTaGGTAGAAACTTTTCTCAGATGTCTCATCATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FCGDSLVHCICT*VETFLRCLIIL Trigger: CAGGATGATGAGACATCTGAGAAAAGTTTCTACCCAAGTACAAATACAATGCACCAGACTATCCCCACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000136539.2 ENSMUST00000151228.2 ENSMUST00000180016.2 |
||
| CDS GCA 72 bp | AATTCCCTCCCTCATAGTAGATCATCTTCTGGAATGTaGCACTATGACTTTCCATATTTGCCATATTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: NSLPHSRSSSGM*HYDFPYLPYLK Trigger: CTTTAAATATGGCAAATATGGAAAGTCATAGTGGCACATTCCAGAAGATGATCTACTATGAGGGAGGGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000061757.4 ENSMUST00000109197.8 ENSMUST00000109198.8 ENSMUST00000136539.2 ENSMUST00000180016.2 |
||