Pregenerated sensors for ZFP619 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068959Ensembl transcript IDs: ENSMUST00000108015.4
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTGCTATCAGCTGCAGCAAACCAGAGTACCCAAGAGTACCGGCCTaGTCTATCAGGGGCAGCTGGGAATATCTTCAAATGCAAATCACT | + |
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Preference number: 1 (lower is better) Translates to: LAISCSKPEYPRVPA*SIRGSWEYLQMQIT Trigger: AGTGATTTGCATTTGAAGATATTCCCAGCTGCCCCTGATAGATCAGGCCGGTACTCTTGGGTACTCTGGTTTGCTGCAGCTGATAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR TCA 90 bp | GTAGGCATTGCATGGGATGACATCACATGCAATGCCAATGTCATATaGTCAGAACAAAGGAAGGTGCAGTTAATCATACGATACAACGTA | + |
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Preference number: 1 (lower is better) Translates to: VGIAWDDITCNANVI*SEQRKVQLIIRYNV Trigger: TACGTTGTATCGTATGATTAACTGCACCTTCCTTTGTTCTGATCATATGACATTGGCATTGCATGTGATGTCATCCCATGCAATGCCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR CCA 90 bp | TGTTTCCCACAACGAAATCATTATTTCCATAAGAGCCGAAAAGTCTaGTTATTTAGTAAAAGTACTTCCGTTTGCAACATTCAGCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: CFPQRNHYFHKSRKV*LFSKSTSVCNIQQV Trigger: GACTTGCTGAATGTTGCAAACGGAAGTACTTTTACTAAATAACCAGACTTTTCGGCTCTTATGGAAATAATGATTTCGTTGTGGGAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR-3UTR GCA 90 bp | AGTGCATATAGATCTGAAAGCTATACCAACCCTCCTGCCTCTGTTCTAAGTGACGGGAATATCTTCAAATaGAAATCACTGGAAACCACC | + |
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Preference number: 2 (lower is better) Translates to: SAYRSESYTNPPASVLSDGNIFK*KSLETT Trigger: GGTGGTTTCCAGTGATTTGCATTTGAAGATATTCCC...GTCACTTAGAACAGAGGCAGGAGGGTTGGTATAGCTTTCAGATCTATATGCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR-3UTR TCA 90 bp | AGCAATCTGCATCAGCTATTTCTGCAGTTAAAGTTCATGTCTACACTTAGGAAATTCCCCTCCCCCAAATaGATCCTTCTAAACTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SNLHQLFLQLKFMSTLRKFPSPK*ILLNFP Trigger: TGGAAAGTTTAGAAGGATTCATTTGGGGGAGGGGAA...TTTCCTAAGTGTAGACATGAACTTTAACTGCAGAAATAGCTGATGCAGATTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR-3UTR GCA 90 bp | AGTGCATATAGATCTGAAAGCTATACCAACCCTCCTGCCTCTGTTCTAAGTGACAAAGAACAAGCTATATaGGCATGTGCTAAAAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: SAYRSESYTNPPASVLSDKEQAI*ACAKSK Trigger: TTTGCTTTTAGCACATGCGCATATAGCTTGTTCTTT...GTCACTTAGAACAGAGGCAGGAGGGTTGGTATAGCTTTCAGATCTATATGCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR-3UTR CCA 90 bp | AGTGCATATAGATCTGAAAGCTATACCAACCCTCCTGCCTCTGTTCTAAGTGACTCAAATGCAAATCACTaGAAACCACCATACATTCAT | + |
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Preference number: 2 (lower is better) Translates to: SAYRSESYTNPPASVLSDSNANH*KPPYIH Trigger: ATGAATGTATGGTGGTTTCCAGTGATTTGCATTTGA...GTCACTTAGAACAGAGGCAGGAGGGTTGGTATAGCTTTCAGATCTATATGCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR CAA 90 bp | GTATGGTGGGCTACACTATCAGGTACATCTATGGTAATTAAGAGATaGTCTAGCAATCTGCATCAGCTATTTCTGCAGTTAAAGTTCATG | + |
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Preference number: 2 (lower is better) Translates to: VWWATLSGTSMVIKR*SSNLHQLFLQLKFM Trigger: CATGAACTTTAACTGCAGAAATAGCTGATGCAGATTGCTAGACAATCTCTTAATTACCATAGATGTACCTGATAGTGTAGCCCACCATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR-3UTR TCA 90 bp | GAAATTACACTGGGAGACCAGAGCTCAATTAATGAGTGGCTTTGGTTTTCTTTCGTACTTTCACACATTTaGAGAGAACTAGGTAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: EITLGDQSSINEWLWFSFVLSHI*RELGSL Trigger: TAGACTACCTAGTTCTCTTCAAATGTGTGAAAGTAC...GAAAGAAAACCAAAGCCACTCATTAATTGAGCTCTGGTCTCCCAGTGTAATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCCGAAAAGTCTGGTTATTTAGTAAAAGTACTTCCGTTTGCAACATTCAGGCTTTACTTCCCAAGTaGCTACCTTCATTAGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: KSRKVWLFSKSTSVCNIQALLPK*LPSLAY Trigger: ATAAGCTAATGAAGGTAGTCACTTGGGAAGTAAAGC...CTGAATGTTGCAAACGGAAGTACTTTTACTAAATAACCAGACTTTTCGGCTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR-3UTR GCA 90 bp | AGCAATCTGCATCAGCTATTTCTGCAGTTAAAGTTCATGTCTACACTTAGGAAAGCTTTTAGCATGATTTaGTTCAACATTTCAACACAC | + |
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Preference number: 2 (lower is better) Translates to: SNLHQLFLQLKFMSTLRKAFSMI*FNISTH Trigger: GTGTGTTGAAATGTTGAAGCAAATCATGCTAAAAGC...TTTCCTAAGTGTAGACATGAACTTTAACTGCAGAAATAGCTGATGCAGATTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR TCA 72 bp | AGCTGCAGCAAACCAGAGTACCCAAGAGTACCGGCCTaGTCTATCAGGGGCAGCTGGGAATATCTTCAAATG | + |
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Preference number: 3 (lower is better) Translates to: SCSKPEYPRVPA*SIRGSWEYLQM Trigger: CATTTGAAGATATTCCCAGCTGCCCCTGATAGATCAGGCCGGTACTCTTGGGTACTCTGGTTTGCTGCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR TCA 72 bp | GTACTTCCGTTTGCAACATTCAGCAAGTCTTGTGTGTaGGCTGAGGTGCTTCAAGGAGCTGTTAGTAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: VLPFATFSKSCV*AEVLQGAVSRH Trigger: ATGCCTACTAACAGCTCCTTGAAGCACCTCAGCTCACACACAAGACTTGCTGAATGTTGCAAACGGAAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR GCA 72 bp | TTGCAACATTCAGCAAGTCTTGTGTGTGAGCTGAGGTaGTTCAAGGAGCTGTTAGTAGGCATTGCATGGGAT | + |
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Preference number: 3 (lower is better) Translates to: LQHSASLVCELR*FKELLVGIAWD Trigger: ATCCCATGCAATGCCTACTAACAGCTCCTTGAAGCACCTCAGCTCACACACAAGACTTGCTGAATGTTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR CCA 72 bp | GCAGTTAATCATACGATACAACGTAGGGGAGTGATGTaGGAGCACATGAGAATCAGTGCATATAGATCTGAA | + |
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Preference number: 3 (lower is better) Translates to: AVNHTIQRRGVM*EHMRISAYRSE Trigger: TTCAGATCTATATGCACTGATTCTCATGTGCTCCCACATCACTCCCCTACGTTGTATCGTATGATTAACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR TCA 72 bp | GCATGGGATGACATCACATGCAATGCCAATGTCATATaGTCAGAACAAAGGAAGGTGCAGTTAATCATACGA | + |
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Preference number: 3 (lower is better) Translates to: AWDDITCNANVI*SEQRKVQLIIR Trigger: TCGTATGATTAACTGCACCTTCCTTTGTTCTGATCATATGACATTGGCATTGCATGTGATGTCATCCCATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | AACCACGGAAGAATCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCGGCTTCTCCCCGCCGTaGGACCTTGCATGCAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: NHGRIWRVLCVFLRAGTSGFSPP*DLACKR Trigger: TCGCTTGCATGCAAGGTCTCACGGCGGGGAGAAGCC...GCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGATTCTTCCGTGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | AACCACGGAAGAATCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCGTGAGAGAACTGGAGTaGTATGGCTTCTCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NHGRIWRVLCVFLRAGTSVRELE*YGFSPQ Trigger: CTGTGGGGAGAAGCCATATCACTCCAGTTCTCTCAC...GCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGATTCTTCCGTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | TCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCTCAGGATACACATGGCTGCTCTCCACTCTaGATTTGCTCACCAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SGVSCVCFCGREQAQDTHGCSPL*ICSPVP Trigger: TGGCACTGGTGAGCAAATTCAGAGTGGAGAGCAGCC...ATGTGTATCCTGAGCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | ATCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCTCAGGATACACAGTTCTTTCGTGCAGTTaGAGGGAACTCGAGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: IWRVLCVFLRAGTSSGYTVLSCS*RELEQL Trigger: CAGCTGCTCGAGTTCCCTTCAACTGCACGAAAGAAC...TGTGTATCCTGAGCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR CCA 90 bp | AACCACGGAAGAATCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCACCCTTTCGTGTACTTaGAGGGAGTTGGAAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: NHGRIWRVLCVFLRAGTSTLSCT*RELEEL Trigger: CAGTTCTTCCAACTCCCTCCAAGTACACGAAAGGGT...GCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGATTCTTCCGTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| 3UTR CAA 72 bp | ACTGGTCTCACTAAGTTGTCTGGGCTGGCCCTGAACTaGCTATCAGCTGCAGCAAACCAGAGTACCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGLTKLSGLALN*LSAAANQSTQE Trigger: CTCTTGGGTACTCTGGTTTGCTGCAGCTGATAGCAAGTTCAGGGCCAGCCCAGACAACTTAGTGAGACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | TCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCTCAGGATACACATGGGAACTGTGACATCTaGAAGCCTTTACACACTGTG | + |
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Preference number: 4 (lower is better) Translates to: SGVSCVCFCGREQAQDTHGNCDI*KPLHTV Trigger: CACAGTGTGTAAAGGCTTTCAGATGTCACAGTTCCC...ATGTGTATCCTGAGCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR GCA 90 bp | AACCACGGAAGAATCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCAAGGTTTTGCCACACTaGTTACACGCGTGCGATTTT | + |
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Preference number: 4 (lower is better) Translates to: NHGRIWRVLCVFLRAGTSKVLPH*LHACDF Trigger: AAAATCGCACGCGTGTAAGCAGTGTGGCAAAACCTT...GCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGATTCTTCCGTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | AACCACGGAAGAATCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCATCCGGAGCGGGTTATaGTGTTCCTTATATTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: NHGRIWRVLCVFLRAGTSIRSGL*CSLYFS Trigger: GGAAAAATATAAGGAACATCATAACCCGCTCCGGAT...GCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGATTCTTCCGTGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | TCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCTCAGGATACACATAAAACGGCGGGTAATTaGAAGGACTCAGAGTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: SGVSCVCFCGREQAQDTHKTAGN*KDSELY Trigger: GTACAACTCTGAGTCCTTTCAATTACCCGCCGTTTT...ATGTGTATCCTGAGCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | TCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCTCAGGATACACATAATGGTCTGGTATTCTaGTTTGATTCCCACAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SGVSCVCFCGREQAQDTHNGLVF*FDSHRS Trigger: GCTTCTGTGGGAATCAAATCAGAATACCAGACCATT...ATGTGTATCCTGAGCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | TCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCTCAGGATACACATGTTCTTTCGTGTAACTaGAGAGAACTTGAACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SGVSCVCFCGREQAQDTHVLSCN*RELEQL Trigger: CAGCTGTTCAAGTTCTCTTCAGTTACACGAAAGAAC...ATGTGTATCCTGAGCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | ATCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCTCAGGATACACAATAGGGGTAAACGAATaGCTTACCACACTGTTTACA | + |
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Preference number: 4 (lower is better) Translates to: IWRVLCVFLRAGTSSGYTIGVNE*LTTLFT Trigger: TGTAAACAGTGTGGTAAGTCATTCGTTTACCCCTAT...TGTGTATCCTGAGCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR GCA 90 bp | GAAATTACACTGGGAGACCAGAGCTCAATTAATGAGTGGCTTTGGTTTTCTTTCGCCGGCGGAAGGTTTTaGCACACTGCTTACACGCGT | + |
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Preference number: 4 (lower is better) Translates to: EITLGDQSSINEWLWFSFAGGRF*HTAYTR Trigger: ACGCGTGTAAGCAGTGTGGCAAAACCTTCCGCCGGC...GAAAGAAAACCAAAGCCACTCATTAATTGAGCTCTGGTCTCCCAGTGTAATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | AGTGCATATAGATCTGAAAGCTATACCAACCCTCCTGCCTCTGTTCTAAGTGACGCCTGGAGGAGACTGTaGCATCTGAAGGTTTTACCA | + |
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Preference number: 4 (lower is better) Translates to: SAYRSESYTNPPASVLSDAWRRL*HLKVLP Trigger: TGGTAAAACCTTCAGATGTCACAGTCTCCTCCAGGC...GTCACTTAGAACAGAGGCAGGAGGGTTGGTATAGCTTTCAGATCTATATGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR GCA 90 bp | ATCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCTCAGGATACACAGTTCTTTTATGTCTTTaGAGGAAAGAGGAACAAAGA | + |
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Preference number: 4 (lower is better) Translates to: IWRVLCVFLRAGTSSGYTVLLCL*RKEEQR Trigger: TCTTTGTTCCTCTTTCCTGCAAAGACATAAAAGAAC...TGTGTATCCTGAGCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR GCA 90 bp | GAAATTACACTGGGAGACCAGAGCTCAATTAATGAGTGGCTTTGGTTTTCTTTCAAGCGAAGGGAGCTGTaGCCTTTGAAAGCCTTACCA | + |
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Preference number: 4 (lower is better) Translates to: EITLGDQSSINEWLWFSFKRREL*PLKALP Trigger: TGGTAAGGCTTTCAAAGGGCACAGCTCCCTTCGCTT...GAAAGAAAACCAAAGCCACTCATTAATTGAGCTCTGGTCTCCCAGTGTAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | AGTGCATATAGATCTGAAAGCTATACCAACCCTCCTGCCTCTGTTCTAAGTGACGTAAGTAGGGATAAATaGAGGACTTACCACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: SAYRSESYTNPPASVLSDVSRDK*RTYHTA Trigger: AGCAGTGTGGTAAGTCCTTCATTTATCCCTACTTAC...GTCACTTAGAACAGAGGCAGGAGGGTTGGTATAGCTTTCAGATCTATATGCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | ATTTCTCTTATGCTAGGACTAGAAATTACACTGGGAGACCAGAGCTCAATTAATGCTCTTTCGTGTAGCTaGAGGGAACTGAGGCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: ISLMLGLEITLGDQSSINALSCS*RELRPL Trigger: CAAAGGCCTCAGTTCCCTTCAGCTACACGAAAGAGC...ATTAATTGAGCTCTGGTCTCCCAGTGTAATTTCTAGTCCTAGCATAAGAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR GCA 90 bp | GAAATTACACTGGGAGACCAGAGCTCAATTAATGAGTGGCTTTGGTTTTCTTTCGAATTTGCTCACCAGTaGCACATGAACTTGGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: EITLGDQSSINEWLWFSFEFAHQ*HMNLEH Trigger: GTGCTCCAAGTTCATGTGGCACTGGTGAGCAAATTC...GAAAGAAAACCAAAGCCACTCATTAATTGAGCTCTGGTCTCCCAGTGTAATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR CCA 90 bp | AGTGCATATAGATCTGAAAGCTATACCAACCCTCCTGCCTCTGTTCTAAGTGACCAGAGTTGTACCACCTaGTTTACATTCAGAAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: SAYRSESYTNPPASVLSDQSCTT*FTFRRV Trigger: AACCCTTCTGAATGTAAACCAGGTGGTACAACTCTG...GTCACTTAGAACAGAGGCAGGAGGGTTGGTATAGCTTTCAGATCTATATGCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | AGTGCATATAGATCTGAAAGCTATACCAACCCTCCTGCCTCTGTTCTAAGTGACAGCACCCACAGGTTTTaGATACACTTCATATCCATA | + |
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Preference number: 4 (lower is better) Translates to: SAYRSESYTNPPASVLSDSTHRF*IHFISI Trigger: TATGGATATGAAGTGTATTCAAAACCTGTGGGTGCT...GTCACTTAGAACAGAGGCAGGAGGGTTGGTATAGCTTTCAGATCTATATGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | AGTGCATATAGATCTGAAAGCTATACCAACCCTCCTGCCTCTGTTCTAAGTGACACTATTTTATGTCTTTaGAGGGAACTGTGGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SAYRSESYTNPPASVLSDTILCL*RELWLL Trigger: GAGAAGCCACAGTTCCCTTCAAAGACATAAAATAGT...GTCACTTAGAACAGAGGCAGGAGGGTTGGTATAGCTTTCAGATCTATATGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR CCA 90 bp | AAGAGCCGAAAAGTCTGGTTATTTAGTAAAAGTACTTCCGTTTGCAACATTCAGAGAACTGGAGTGATATaGCTTCTCCCCACAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: KSRKVWLFSKSTSVCNIQRTGVI*LLPTVL Trigger: GAGGACTGTGGGGAGAAGCCATATCACTCCAGTTCT...CTGAATGTTGCAAACGGAAGTACTTTTACTAAATAACCAGACTTTTCGGCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | AAGAGCCGAAAAGTCTGGTTATTTAGTAAAAGTACTTCCGTTTGCAACATTCAGATCCTTTCGTGCCGTTaGAGGAAAGAGGCACAGATA | + |
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Preference number: 4 (lower is better) Translates to: KSRKVWLFSKSTSVCNIQILSCR*RKEAQI Trigger: TATCTGTGCCTCTTTCCTTCAACGGCACGAAAGGAT...CTGAATGTTGCAAACGGAAGTACTTTTACTAAATAACCAGACTTTTCGGCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | AGCAATCTGCATCAGCTATTTCTGCAGTTAAAGTTCATGTCTACACTTAGGAAAGGTAGCATGGATAAATaGAGGACTTCCCACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: SNLHQLFLQLKFMSTLRKGSMDK*RTSHTA Trigger: AGCAGTGTGGGAAGTCCTTCATTTATCCATGCTACC...TTTCCTAAGTGTAGACATGAACTTTAACTGCAGAAATAGCTGATGCAGATTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR GCA 90 bp | AGTGCATATAGATCTGAAAGCTATACCAACCCTCCTGCCTCTGTTCTAAGTGACAGAGGAACAAAGAAATaGCTTACCACATGTCTTACA | + |
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Preference number: 4 (lower is better) Translates to: SAYRSESYTNPPASVLSDRGTKK*LTTCLT Trigger: TGTAAGACATGTGGTAAGGCATTTCTTTGTTCCTCT...GTCACTTAGAACAGAGGCAGGAGGGTTGGTATAGCTTTCAGATCTATATGCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | AAGAGCCGAAAAGTCTGGTTATTTAGTAAAAGTACTTCCGTTTGCAACATTCAGGGCTTCTCTCCCGTATaGTGCCTTTCATGCATTTTA | + |
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Preference number: 4 (lower is better) Translates to: KSRKVWLFSKSTSVCNIQGFSPV*CLSCIL Trigger: TAAAATGCATGAAAGGCATCATACGGGAGAGAAGCC...CTGAATGTTGCAAACGGAAGTACTTTTACTAAATAACCAGACTTTTCGGCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR TCA 90 bp | GAAATTACACTGGGAGACCAGAGCTCAATTAATGAGTGGCTTTGGTTTTCTTTCATATGTGAATTGTTGTaGGAGAACTGGAGTGATATG | + |
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Preference number: 4 (lower is better) Translates to: EITLGDQSSINEWLWFSFICELL*ENWSDM Trigger: CATATCACTCCAGTTCTCTCACAACAATTCACATAT...GAAAGAAAACCAAAGCCACTCATTAATTGAGCTCTGGTCTCCCAGTGTAATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR CCA 90 bp | AGCAATCTGCATCAGCTATTTCTGCAGTTAAAGTTCATGTCTACACTTAGGAAACCAGGCTGTTTATACTaGTCTTCAATGGTCTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: SNLHQLFLQLKFMSTLRKPGCLY*SSMVWY Trigger: ATACCAGACCATTGAAGACCAGTATAAACAGCCTGG...TTTCCTAAGTGTAGACATGAACTTTAACTGCAGAAATAGCTGATGCAGATTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR CCA 90 bp | ATTTCTCTTATGCTAGGACTAGAAATTACACTGGGAGACCAGAGCTCAATTAATATCCTTTCATGTCTTTaGAGGAAGGAGGAGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: ISLMLGLEITLGDQSSINILSCL*RKEEHR Trigger: TCTATGCTCCTCCTTCCTCCAAAGACATGAAAGGAT...ATTAATTGAGCTCTGGTCTCCCAGTGTAATTTCTAGTCCTAGCATAAGAGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR CAA 90 bp | AACCACGGAAGAATCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCAGGGAACTGAGGCCTTaGAACGCTTTGCCACACTGT | + |
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Preference number: 5 (lower is better) Translates to: NHGRIWRVLCVFLRAGTSRELRP*NALPHC Trigger: ACAGTGTGGCAAAGCGTTCAAAGGCCTCAGTTCCCT...GCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGATTCTTCCGTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR CAA 90 bp | TCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCTCAGGATACACATGACCCTTTCGTGTACTaGGAGGGAGTTGGAAGAACT | + |
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Preference number: 5 (lower is better) Translates to: SGVSCVCFCGREQAQDTHDPFVY*EGVGRT Trigger: AGTTCTTCCAACTCCCTCCAAGTACACGAAAGGGTC...ATGTGTATCCTGAGCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR CAA 90 bp | TCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCTCAGGATACACATAGGCCTTTGAACGCTTaGCCACACTGTACACACTCA | + |
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Preference number: 5 (lower is better) Translates to: SGVSCVCFCGREQAQDTHRPLNA*PHCTHS Trigger: TGAGTGTGTACAGTGTGGCAAAGCGTTCAAAGGCCT...ATGTGTATCCTGAGCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR CAA 90 bp | ATCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCTCAGGATACACAGTCTGGTATTCTGATTaGATTCCCACAGAAGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: IWRVLCVFLRAGTSSGYTVWYSD*IPTEAR Trigger: CCTTGCTTCTGTGGGAATCAAATCAGAATACCAGAC...TGTGTATCCTGAGCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR CAA 90 bp | TCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCTCAGGATACACATAGGTTACTGAGGCTTTaGAAGGCTTTGCTGCATTGT | + |
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Preference number: 5 (lower is better) Translates to: SGVSCVCFCGREQAQDTHRLLRL*KALLHC Trigger: ACAATGCAGCAAAGCCTTCAAAAGCCTCAGTAACCT...ATGTGTATCCTGAGCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR CAA 90 bp | AACCACGGAAGAATCTGGCGTGTCCTGTGTGTGTTTCTGCGGGCGGGAACAAGCAGTTCTTTCGTGCATTaGAAGGAAACAGGGATAAAG | + |
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Preference number: 5 (lower is better) Translates to: NHGRIWRVLCVFLRAGTSSSFVH*KETGIK Trigger: CTTTATCCCTGTTTCCTTCAAATGCACGAAAGAACT...GCTTGTTCCCGCCCGCAGAAACACACACAGGACACGCCAGATTCTTCCGTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS TCA 90 bp | AAGGCTGTTTTGTTTATAGTATATCCATGGGGCTGCTCTCCACTCTaGATTTGCTCACCAGTGCCACATGAACTTGGAGCACCCACAGGT | + |
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Preference number: 5 (lower is better) Translates to: KAVLFIVYPWGCSPL*ICSPVPHELGAPTG Trigger: ACCTGTGGGTGCTCCAAGTTCATGTGGCACTGGTGAGCAAATTCAGAGTGGAGAGCAGCCCCATGGATATACTATAAACAAAACAGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS CCA 90 bp | AGAACTGGAGTGATATGGCTTCTCCCCACAGTCCTCAAGTGCGTATaGAGTGTATCCGGAGCGGGTTATGATGTTCCTTATATTTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: RTGVIWLLPTVLKCV*SVSGAGYDVPYIFP Trigger: GGGAAAAATATAAGGAACATCATAACCCGCTCCGGATACACTCCATACGCACTTGAGGACTGTGGGGAGAAGCCATATCACTCCAGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR CAA 90 bp | AGCAATCTGCATCAGCTATTTCTGCAGTTAAAGTTCATGTCTACACTTAGGAAAAGCCGGCGGAAGGTTTaGCCACACTGCTTACACGCG | + |
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Preference number: 5 (lower is better) Translates to: SNLHQLFLQLKFMSTLRKSRRKV*PHCLHA Trigger: CGCGTGTAAGCAGTGTGGCAAAACCTTCCGCCGGCT...TTTCCTAAGTGTAGACATGAACTTTAACTGCAGAAATAGCTGATGCAGATTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS TCA 90 bp | CATGCTTTCCTCCATTATGAGTTCCACTGCAAAACGGCGGGTAATTaGAAGGACTCAGAGTTGTACCACCTGGTTTACATTCAGAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: HAFLHYEFHCKTAGN*KDSELYHLVYIQKG Trigger: ACCCTTCTGAATGTAAACCAGGTGGTACAACTCTGAGTCCTTTCAATTACCCGCCGTTTTGCAGTGGAACTCATAATGGAGGAAAGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS CCA 90 bp | TTCCTTATATTTTTCCCAGGCTGTTTATACTGGTCTTCAATGGTCTaGTATTCTGATTTGATTCCCACAGAAGCAAGGTTACTGCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: FLIFFPGCLYWSSMV*YSDLIPTEARLLQV Trigger: GACCTGCAGTAACCTTGCTTCTGTGGGAATCAAATCAGAATACCAGACCATTGAAGACCAGTATAAACAGCCTGGGAAAAATATAAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR CAA 90 bp | AGCAATCTGCATCAGCTATTTCTGCAGTTAAAGTTCATGTCTACACTTAGGAAATGTACTTGGAGGGAGTaGGAAGAACTGAGGGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: SNLHQLFLQLKFMSTLRKCTWRE*EELRVL Trigger: CAAAACCCTCAGTTCTTCCAACTCCCTCCAAGTACA...TTTCCTAAGTGTAGACATGAACTTTAACTGCAGAAATAGCTGATGCAGATTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR CAA 90 bp | AGCAATCTGCATCAGCTATTTCTGCAGTTAAAGTTCATGTCTACACTTAGGAAAAATCCTTTCGTGCCGTaGAAGGAAAGAGGCACAGAT | + |
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Preference number: 5 (lower is better) Translates to: SNLHQLFLQLKFMSTLRKNPFVP*KERGTD Trigger: ATCTGTGCCTCTTTCCTTCAACGGCACGAAAGGATT...TTTCCTAAGTGTAGACATGAACTTTAACTGCAGAAATAGCTGATGCAGATTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS-3UTR CAA 90 bp | AGCAATCTGCATCAGCTATTTCTGCAGTTAAAGTTCATGTCTACACTTAGGAAAAGACTTCTGAAAGCCTaGTCACACTGTTTACACCTA | + |
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Preference number: 5 (lower is better) Translates to: SNLHQLFLQLKFMSTLRKRLLKA*SHCLHL Trigger: TAGGTGTAAACAGTGTGACAAGGCTTTCAGAAGTCT...TTTCCTAAGTGTAGACATGAACTTTAACTGCAGAAATAGCTGATGCAGATTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS CAA 72 bp | CACCAGTGCCACATGAACTTGGAGCACCCACAGGTTTaGAATACACTTCATATCCATACGCTCCGCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: HQCHMNLEHPQV*NTLHIHTLRSQ Trigger: CTGTGAGCGGAGCGTATGGATATGAAGTGTATTCAAAACCTGTGGGTGCTCCAAGTTCATGTGGCACTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS TCA 72 bp | TCACAGTGTGGATTCCCACGTATATGTGAATTGTTGTaGGAGAACTGGAGTGATATGGCTTCTCCCCACAGT | + |
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Preference number: 6 (lower is better) Translates to: SQCGFPRICELL*ENWSDMASPHS Trigger: ACTGTGGGGAGAAGCCATATCACTCCAGTTCTCTCACAACAATTCACATATACGTGGGAATCCACACTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS TCA 72 bp | TTGTTTATAGTATATCCATGGGGCTGCTCTCCACTCTaGATTTGCTCACCAGTGCCACATGAACTTGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: LFIVYPWGCSPL*ICSPVPHELGA Trigger: TGCTCCAAGTTCATGTGGCACTGGTGAGCAAATTCAGAGTGGAGAGCAGCCCCATGGATATACTATAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS TCA 72 bp | CTCCATTATGAGTTCCACTGCAAAACGGCGGGTAATTaGAAGGACTCAGAGTTGTACCACCTGGTTTACATT | + |
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Preference number: 6 (lower is better) Translates to: LHYEFHCKTAGN*KDSELYHLVYI Trigger: AATGTAAACCAGGTGGTACAACTCTGAGTCCTTTCAATTACCCGCCGTTTTGCAGTGGAACTCATAATGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS TCA 72 bp | AGGCTGTTTATACTGGTCTTCAATGGTCTGGTATTCTaGTTTGATTCCCACAGAAGCAAGGTTACTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: RLFILVFNGLVF*FDSHRSKVTAG Trigger: ACCTGCAGTAACCTTGCTTCTGTGGGAATCAAATCAGAATACCAGACCATTGAAGACCAGTATAAACAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS CAA 72 bp | TGTTTATACTGGTCTTCAATGGTCTGGTATTCTGATTaGATTCCCACAGAAGCAAGGTTACTGCAGGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CLYWSSMVWYSD*IPTEARLLQVS Trigger: GGAGACCTGCAGTAACCTTGCTTCTGTGGGAATCAAATCAGAATACCAGACCATTGAAGACCAGTATAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS CCA 72 bp | TTTTTCCCAGGCTGTTTATACTGGTCTTCAATGGTCTaGTATTCTGATTTGATTCCCACAGAAGCAAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: FFPGCLYWSSMV*YSDLIPTEARL Trigger: TAACCTTGCTTCTGTGGGAATCAAATCAGAATACCAGACCATTGAAGACCAGTATAAACAGCCTGGGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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| CDS CAA 72 bp | ATAAGGCTTTTCGCCAGCATGAGACACTTTCTGTCTTaGAAAGGAACTTCTATCTTTAAGGTCTTTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: IRLFASMRHFLS*KGTSIFKVFSR Trigger: TCTGGAAAAGACCTTAAAGATAGAAGTTCCTTTCAAAGACAGAAAGTGTCTCATGCTGGCGAAAAGCCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108015.4 |
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