RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP616 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000069476

Ensembl transcript IDs: ENSMUST00000074813.12, ENSMUST00000108463.8, ENSMUST00000116546.3

Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTGCTAGAGTAGTCTCCAATTGTAAAAATGGGAGTGACTCAGCCTaGGTTCTCTCAGGAATAGCTAGAACTCCTTTATTCTTTTCAGAA +
Preference number: 1 (lower is better)
Translates to: SARVVSNCKNGSDSA*VLSGIARTPLFFSE
Trigger: TTCTGAAAAGAATAAAGGAGTTCTAGCTATTCCTGAGAGAACTCAGGCTGAGTCACTCCCATTTTTACAATTGGAGACTACTCTAGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
3UTR GCA 90 bp GGAGTTTCCACAACTACCTTCCACATGATATGTTCCAAGTTTCACTaGATACATGGACATTTTCTTATGTTGACCTACATGGTAGAACTT +
Preference number: 1 (lower is better)
Translates to: GVSTTTFHMICSKFH*IHGHFLMLTYMVEL
Trigger: AAGTTCTACCATGTAGGTCAACATAAGAAAATGTCCATGTATGCAGTGAAACTTGGAACATATCATGTGGAAGGTAGTTGTGGAAACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
3UTR TCA 90 bp GACAATGTTTGCTGCAGTATGGATTCTGTGGTCACCTTGAAGATTTaGGGACTGGGAAATGTATTTTACACATTCATTACACCTATAAAG +
Preference number: 1 (lower is better)
Translates to: DNVCCSMDSVVTLKI*GLGNVFYTFITPIK
Trigger: CTTTATAGGTGTAATGAATGTGTAAAATACATTTCCCAGTCCTCAAATCTTCAAGGTGACCACAGAATCCATACTGCAGCAAACATTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
3UTR TCA 90 bp GTACAGTTTCTCTCTAGTATCCATGCTATGTCAGGTTTAAAAATATaGTTTCTGTGTGAAGGGCTTTCTACGTTCTTTACATTGACAATG +
Preference number: 1 (lower is better)
Translates to: VQFLSSIHAMSGLKI*FLCEGLSTFFTLTM
Trigger: CATTGTCAATGTAAAGAACGTAGAAAGCCCTTCACACAGAAATCATATTTTTAAACCTGACATAGCATGGATACTAGAGAGAAACTGTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
3UTR-3UTR CCA 90 bp CAATTCCTAATAAGGTCAGGGCTTTCCTCTGTGAGTTCTCTGATAGAGAGTAAGTTATACCCTGGGGCCTaGGAAAGTTGTCTTTTAATG +
Preference number: 2 (lower is better)
Translates to: QFLIRSGLSSVSSLIESKLYPGA*ESCLLM
Trigger: CATTAAAAGACAACTTTCCCAGGCCCCAGGGTATAA...CTTACTCTCTATCAGAGAACTCACAGAGGAAAGCCCTGACCTTATTAGGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
3UTR-3UTR TCA 90 bp CAATTCCTAATAAGGTCAGGGCTTTCCTCTGTGAGTTCTCTGATAGAGAGTAAGGTGCCTTTTAAGACTTaGGGAACAGGCAAAATATTT +
Preference number: 2 (lower is better)
Translates to: QFLIRSGLSSVSSLIESKVPFKT*GTGKIF
Trigger: AAATATTTTGCCTGTTCCTCAAGTCTTAAAAGGCAC...CTTACTCTCTATCAGAGAACTCACAGAGGAAAGCCCTGACCTTATTAGGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
3UTR-3UTR TCA 90 bp CAATTCCTAATAAGGTCAGGGCTTTCCTCTGTGAGTTCTCTGATAGAGAGTAAGATGAACTTGAAGAGATaGGGATCAGGTAAAAGACAT +
Preference number: 2 (lower is better)
Translates to: QFLIRSGLSSVSSLIESKMNLKR*GSGKRH
Trigger: ATGTCTTTTACCTGATCCTCATCTCTTCAAGTTCAT...CTTACTCTCTATCAGAGAACTCACAGAGGAAAGCCCTGACCTTATTAGGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
3UTR-3UTR GCA 90 bp CAATTCCTAATAAGGTCAGGGCTTTCCTCTGTGAGTTCTCTGATAGAGAGTAAGTGTTCCAAGTTTCACTaGATACATGGACATTTTCTT +
Preference number: 2 (lower is better)
Translates to: QFLIRSGLSSVSSLIESKCSKFH*IHGHFL
Trigger: AAGAAAATGTCCATGTATGCAGTGAAACTTGGAACA...CTTACTCTCTATCAGAGAACTCACAGAGGAAAGCCCTGACCTTATTAGGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
3UTR-3UTR CCA 90 bp CCTTACAACTATACAGTTTCTTTACAGTACAGATCCTGTGAGGGTTTTGAAGAGTATCATTTACTCTGTTaGAGTTTCCACAACTACCTT +
Preference number: 2 (lower is better)
Translates to: PYNYTVSLQYRSCEGFEEYHLLC*SFHNYL
Trigger: AAGGTAGTTGTGGAAACTCCAACAGAGTAAATGATA...CTCTTCAAAACCCTCACAGGATCTGTACTGTAAAGAAACTGTATAGTTGTAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
3UTR TCA 72 bp AAGGCTCCATGTGGTATGATCCTGCTGTTGCAAAGATaGCTGAGAGCAGTGATTAGACATAGCCTGTCTACT +
Preference number: 3 (lower is better)
Translates to: KAPCGMILLLQR*LRAVIRHSLST
Trigger: AGTAGACAGGCTATGTCTAATCACTGCTCTCAGTCATCTTTGCAACAGCAGGATCATACCACATGGAGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
3UTR TCA 72 bp CTTTACAGTACAGATCCTGTGAGGGTTTTGAAGAGCTaGGTACTGAGCAAAGGACTTGCCACATTGCACACA +
Preference number: 3 (lower is better)
Translates to: LYSTDPVRVLKS*VLSKGLATLHT
Trigger: TGTGTGCAATGTGGCAAGTCCTTTGCTCAGTACTCAGCTCTTCAAAACCCTCACAGGATCTGTACTGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
3UTR CCA 72 bp GACATTGGAATTGAAATTCAAGACCTTATTATACCCTaGGGCCTGGGAAAGTTGTCTTTTAATGTGTTTCAT +
Preference number: 3 (lower is better)
Translates to: DIGIEIQDLIIP*GLGKLSFNVFH
Trigger: ATGAAACACATTAAAAGACAACTTTCCCAGGCCCCAGGGTATAATAAGGTCTTGAATTTCAATTCCAATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
3UTR GCA 72 bp ATTGAAGTACTGTTAAATCCCATACTACTTGATAAATaGTTCAGGGAAGTGGGTTTATTCACCCAAATGTCA +
Preference number: 3 (lower is better)
Translates to: IEVLLNPILLDK*FREVGLFTQMS
Trigger: TGACATTTGGGTGAATAAACCCACTTCCCTGAAGCATTTATCAAGTAGTATGGGATTTAACAGTACTTCAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
3UTR CCA 72 bp GAATTGAAATTCAAGACCTTATTATACCCTGGGGCCTaGGAAAGTTGTCTTTTAATGTGTTTCATGTTATCT +
Preference number: 3 (lower is better)
Translates to: ELKFKTLLYPGA*ESCLLMCFMLS
Trigger: AGATAACATGAAACACATTAAAAGACAACTTTCCCAGGCCCCAGGGTATAATAAGGTCTTGAATTTCAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
3UTR CAA 72 bp TTGCTGCAGTATGGATTCTGTGGTCACCTTGAAGATTaGAGGACTGGGAAATGTATTTTACACATTCATTAC +
Preference number: 4 (lower is better)
Translates to: LLQYGFCGHLED*RTGKCILHIHY
Trigger: GTAATGAATGTGTAAAATACATTTCCCAGTCCTCAAATCTTCAAGGTGACCACAGAATCCATACTGCAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
CDS-3UTR CCA 90 bp TACCTTCCACATGATATGTTCCAAGTTTCACTGCATACATGGACATTTTCTTATTGCATCAACAATCCATaGTTCTTTGTTTTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: YLPHDMFQVSLHTWTFSYCINNP*FFVLFK
Trigger: CTTGAACAAAACAAAGAACCATGGATTGTTGATGCA...ATAAGAAAATGTCCATGTATGCAGTGAAACTTGGAACATATCATGTGGAAGGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
CDS-3UTR CCA 90 bp CACCACCACTTCTATATTCCCAAAACTTCTTTCTATATAGGTCTAAAAGACCATTGCATCAACAATCCATaGTTCTTTGTTTTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: HHHFYIPKTSFYIGLKDHCINNP*FFVLFK
Trigger: CTTGAACAAAACAAAGAACCATGGATTGTTGATGCA...ATGGTCTTTTAGACCTATATAGAAAGAAGTTTTGGGAATATAGAAGTGGTGGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074813.12
ENSMUST00000116546.3
CDS GCA 90 bp AGTATGTTCACAAGACAAAGCTGGTTCTCTTACTTGTGTTTCCTCTaGATCAACAATCCATGGTTCTTTGTTTTGTTCAAGACAGATGAT +
Preference number: 5 (lower is better)
Translates to: SMFTRQSWFSYLCFL*INNPWFFVLFKTDD
Trigger: ATCATCTGTCTTGAACAAAACAAAGAACCATGGATTGTTGATGCAGAGGAAACACAAGTAAGAGAACCAGCTTTGTCTTGTGAACATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108463.8
CDS-3UTR CAA 90 bp ATCGTGTTGAATGACATTGGAATTGAAATTCAAGACCTTATTATACCCTGGGGCACAATCCATGGTTCTTaGTTTTGTTCAAGACAGATG +
Preference number: 5 (lower is better)
Translates to: IVLNDIGIEIQDLIIPWGTIHGS*FCSRQM
Trigger: CATCTGTCTTGAACAAAACAAAGAACCATGGATTGT...GCCCCAGGGTATAATAAGGTCTTGAATTTCAATTCCAATGTCATTCAACACGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074813.12
CDS GCA 90 bp GTAGTAGATTCTCAGTATGTTCACAAGACAAAGTTGTGTTTCCTCTaGATCAACAATCCATGGTTCTTTGTTTTGTTCAAGACAGATGAT +
Preference number: 5 (lower is better)
Translates to: VVDSQYVHKTKLCFL*INNPWFFVLFKTDD
Trigger: ATCATCTGTCTTGAACAAAACAAAGAACCATGGATTGTTGATGCAGAGGAAACACAACTTTGTCTTGTGAACATACTGAGAATCTACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074813.12
ENSMUST00000116546.3
CDS-3UTR CAA 90 bp TCACCACCACTTCTATATTCCCAAAACTTCTTTCTATATAGGTCTAAAAGACCACCATGGTTCTTTGTTTaGTTCAAGACAGATGATTAC +
Preference number: 5 (lower is better)
Translates to: SPPLLYSQNFFLYRSKRPPWFFV*FKTDDY
Trigger: GTAATCATCTGTCTTGAACAAAACAAAGAACCATGG...TGGTCTTTTAGACCTATATAGAAAGAAGTTTTGGGAATATAGAAGTGGTGGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074813.12
ENSMUST00000116546.3
CDS-3UTR CAA 90 bp TCACCACCACTTCTATATTCCCAAAACTTCTTTCTATATAGGTCTAAAAGACCAACAATCCATGGTTCTTaGTTTTGTTCAAGACAGATG +
Preference number: 5 (lower is better)
Translates to: SPPLLYSQNFFLYRSKRPTIHGS*FCSRQM
Trigger: CATCTGTCTTGAACAAAACAAAGAACCATGGATTGT...TGGTCTTTTAGACCTATATAGAAAGAAGTTTTGGGAATATAGAAGTGGTGGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074813.12
ENSMUST00000116546.3
CDS CAA 72 bp CTCAGTATGTTCACAAGACAAAGCTGGTTCTCTTACTaGTGTTTCCTCTGCATCAACAATCCATGGTTCTTT +
Preference number: 6 (lower is better)
Translates to: LSMFTRQSWFSY*CFLCINNPWFF
Trigger: AAAGAACCATGGATTGTTGATGCAGAGGAAACACAAGTAAGAGAACCAGCTTTGTCTTGTGAACATACTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108463.8
CDS GCA 72 bp ACAAGACAAAGCTGGTTCTCTTACTTGTGTTTCCTCTaGATCAACAATCCATGGTTCTTTGTTTTGTTCAAG +
Preference number: 6 (lower is better)
Translates to: TRQSWFSYLCFL*INNPWFFVLFK
Trigger: CTTGAACAAAACAAAGAACCATGGATTGTTGATGCAGAGGAAACACAAGTAAGAGAACCAGCTTTGTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108463.8
CDS CAA 90 bp TACACACCATTTGTAGTAGATTCTCAGTATGTTCACAAGACAAAGTaGTGTTTCCTCTGCATCAACAATCCATGGTTCTTTGTTTTGTTC +
Preference number: 6 (lower is better)
Translates to: YTPFVVDSQYVHKTK*CFLCINNPWFFVLF
Trigger: GAACAAAACAAAGAACCATGGATTGTTGATGCAGAGGAAACACAACTTTGTCTTGTGAACATACTGAGAATCTACTACAAATGGTGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074813.12
ENSMUST00000116546.3