Pregenerated sensors for ZFP61 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050605Ensembl transcript IDs: ENSMUST00000077780.14, ENSMUST00000145131.8, ENSMUST00000165241.8
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGGGCTTCAGGTGACCCTCTCCCTCGGACTGCTCCTCTCGCACTCTaGCCGTTAATCCCTGAATCTCTCTCCCTCGGGGCTGCCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: RASGDPLPRTAPLAL*PLIPESLSLGAALL Trigger: GAGGAGGGCAGCCCCGAGGGAGAGAGATTCAGGGATTAACGGTCAGAGTGCGAGAGGAGCAGTCCGAGGGAGAGGGTCACCTGAAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077780.14 ENSMUST00000165241.8 |
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| CDS TCA 90 bp | CCCTCTCCCTCGGACTGCTCCTCTCGCACTCTGACCGTTAATCCCTaGATCTCTCTCCCTCGGGGCTGCCCTCCTCATTTGAGGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: PSPSDCSSRTLTVNP*ISLPRGCPPHLRLL Trigger: GAGAAGCCTCAAATGAGGAGGGCAGCCCCGAGGGAGAGAGATTCAGGGATTAACGGTCAGAGTGCGAGAGGAGCAGTCCGAGGGAGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077780.14 ENSMUST00000165241.8 |
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| CDS TCA 90 bp | GTCCGTGACCCACTGCCAGATTTGCCAGCAGGGAAGGGCTTCAGGTaGCCCTCTCCCTCGGACTGCTCCTCTCGCACTCTGACCGTTAAT | + |
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Preference number: 5 (lower is better) Translates to: VRDPLPDLPAGKGFR*PSPSDCSSRTLTVN Trigger: ATTAACGGTCAGAGTGCGAGAGGAGCAGTCCGAGGGAGAGGGTCACCTGAAGCCCTTCCCTGCTGGCAAATCTGGCAGTGGGTCACGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077780.14 ENSMUST00000145131.8 ENSMUST00000165241.8 |
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| CDS CCA 90 bp | TCCGAGTCTGCCGCTCAGTCAGGGAAGTTCCCTGGGCTCTCAAAGTaGGAAGTGGGGGCCTTCCGGAGTGGATGGGAACACTTATTGTAT | + |
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Preference number: 5 (lower is better) Translates to: SESAAQSGKFPGLSK*EVGAFRSGWEHLLY Trigger: ATACAATAAGTGTTCCCATCCACTCCGGAAGGCCCCCACTTCCCACTTTGAGAGCCCAGGGAACTTCCCTGACTGAGCGGCAGACTCGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077780.14 ENSMUST00000145131.8 ENSMUST00000165241.8 |
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| CDS GCA 90 bp | GACCGAATTCCTTCCGTTCTTCTCCTGTGCGACCTCCTTGATGAATaGAGCCATCTGTGCCACAAGGGGAGCCTCTCCCACATTCAACAC | + |
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Preference number: 5 (lower is better) Translates to: DRIPSVLLLCDLLDE*SHLCHKGSLSHIQH Trigger: GTGTTGAATGTGGGAGAGGCTCCCCTTGTGGCACAGATGGCTGCATTCATCAAGGAGGTCGCACAGGAGAAGAACGGAAGGAATTCGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077780.14 ENSMUST00000165241.8 |
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| CDS TCA 90 bp | GAGGAGTATTTACCACAGAGTTTTGACTCGTGGTTAAGTCGTCCGTaGCCCACTGCCAGATTTGCCAGCAGGGAAGGGCTTCAGGTGACC | + |
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Preference number: 5 (lower is better) Translates to: EEYLPQSFDSWLSRP*PTARFASREGLQVT Trigger: GGTCACCTGAAGCCCTTCCCTGCTGGCAAATCTGGCAGTGGGTCACGGACGACTTAACCACGAGTCAAAACTCTGTGGTAAATACTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077780.14 ENSMUST00000145131.8 ENSMUST00000165241.8 |
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| CDS TCA 90 bp | CATTCAACACATGCACAAGCCCTCCCTCCTGAGTCTAACACTTGGTaGGGATCCGAGCTGGAGAGATCGGTAACGGCTTCTCTGTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: HSTHAQALPPESNTW*GSELERSVTASLCW Trigger: CCAACACAGAGAAGCCGTTACCGATCTCTCCAGCTCGGATCCTCACCAAGTGTTAGACTCAGGAGGGAGGGCTTGTGCATGTGTTGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077780.14 ENSMUST00000165241.8 |
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| CDS CCA 72 bp | GCCGCTCAGTCAGGGAAGTTCCCTGGGCTCTCAAAGTaGGAAGTGGGGGCCTTCCGGAGTGGATGGGAACAC | + |
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Preference number: 6 (lower is better) Translates to: AAQSGKFPGLSK*EVGAFRSGWEH Trigger: GTGTTCCCATCCACTCCGGAAGGCCCCCACTTCCCACTTTGAGAGCCCAGGGAACTTCCCTGACTGAGCGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077780.14 ENSMUST00000145131.8 ENSMUST00000165241.8 |
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| CDS CCA 72 bp | TCCTTCCGAGTCTGCCGCTCAGTCAGGGAAGTTCCCTaGGCTCTCAAAGTGGGAAGTGGGGGCCTTCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: SFRVCRSVREVP*ALKVGSGGLPE Trigger: CTCCGGAAGGCCCCCACTTCCCACTTTGAGAGCCCAGGGAACTTCCCTGACTGAGCGGCAGACTCGGAAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077780.14 ENSMUST00000145131.8 ENSMUST00000165241.8 |
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| CDS TCA 72 bp | GGTGACCCTCTCCCTCGGACTGCTCCTCTCGCACTCTaGCCGTTAATCCCTGAATCTCTCTCCCTCGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: GDPLPRTAPLAL*PLIPESLSLGA Trigger: AGCCCCGAGGGAGAGAGATTCAGGGATTAACGGTCAGAGTGCGAGAGGAGCAGTCCGAGGGAGAGGGTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077780.14 ENSMUST00000165241.8 |
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| CDS GCA 72 bp | CTCGTGGTTAAGTCGTCCGTGACCCACTGCCAGATTTaGCAGCAGGGAAGGGCTTCAGGTGACCCTCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LVVKSSVTHCQI*QQGRASGDPLP Trigger: AGGGAGAGGGTCACCTGAAGCCCTTCCCTGCTGGCAAATCTGGCAGTGGGTCACGGACGACTTAACCACGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077780.14 ENSMUST00000145131.8 ENSMUST00000165241.8 |
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| CDS TCA 72 bp | TCGGACTGCTCCTCTCGCACTCTGACCGTTAATCCCTaGATCTCTCTCCCTCGGGGCTGCCCTCCTCATTTG | + |
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Preference number: 6 (lower is better) Translates to: SDCSSRTLTVNP*ISLPRGCPPHL Trigger: CAAATGAGGAGGGCAGCCCCGAGGGAGAGAGATTCAGGGATTAACGGTCAGAGTGCGAGAGGAGCAGTCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077780.14 ENSMUST00000165241.8 |
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| CDS TCA 72 bp | GGTGACCCTCTCCCTCGGACTGCTCCTCTCGCACTCTaGCCGTTAATCCCCACTGAGAGCAGGTTCCGAAAA | + |
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Preference number: 6 (lower is better) Translates to: GDPLPRTAPLAL*PLIPTESRFRK Trigger: TTTTCGGAACCTGCTCTCAGTGGGGATTAACGGTCAGAGTGCGAGAGGAGCAGTCCGAGGGAGAGGGTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145131.8 |
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| CDS GCA 72 bp | CCTTCCGTTCTTCTCCTGTGCGACCTCCTTGATGAATaGAGCCATCTGTGCCACAAGGGGAGCCTCTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PSVLLLCDLLDE*SHLCHKGSLSH Trigger: GTGGGAGAGGCTCCCCTTGTGGCACAGATGGCTGCATTCATCAAGGAGGTCGCACAGGAGAAGAACGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077780.14 ENSMUST00000165241.8 |
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| CDS TCA 72 bp | CAGGTGTACGGTTTCACTGGCGTGCAGACCCTCTGGTaGCCGAATTCCTTCCGTTCTTCTCCTGTGCGACCT | + |
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Preference number: 6 (lower is better) Translates to: QVYGFTGVQTLW*PNSFRSSPVRP Trigger: AGGTCGCACAGGAGAAGAACGGAAGGAATTCGGTCACCAGAGGGTCTGCACGCCAGTGAAACCGTACACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077780.14 ENSMUST00000165241.8 |
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| CDS GCA 72 bp | CTCCTGTGCGACCTCCTTGATGAATGCAGCCATCTGTaGCACAAGGGGAGCCTCTCCCACATTCAACACATG | + |
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Preference number: 6 (lower is better) Translates to: LLCDLLDECSHL*HKGSLSHIQHM Trigger: CATGTGTTGAATGTGGGAGAGGCTCCCCTTGTGGCACAGATGGCTGCATTCATCAAGGAGGTCGCACAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077780.14 ENSMUST00000165241.8 |
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| CDS GCA 72 bp | TTCCGCACTGCTCACAGGTGTACGGTTTCACTGGCGTaGAGACCCTCTGGTGACCGAATTCCTTCCGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FRTAHRCTVSLA*RPSGDRIPSVL Trigger: AAGAACGGAAGGAATTCGGTCACCAGAGGGTCTGCACGCCAGTGAAACCGTACACCTGTGAGCAGTGCGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077780.14 ENSMUST00000165241.8 |
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| CDS CCA 72 bp | AGTCAGGGAAGTTCCCTGGGCTCTCAAAGTGGGAAGTaGGGGCCTTCCGGAGTGGATGGGAACACTTATTGT | + |
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Preference number: 6 (lower is better) Translates to: SQGSSLGSQSGK*GPSGVDGNTYC Trigger: ACAATAAGTGTTCCCATCCACTCCGGAAGGCCCCCACTTCCCACTTTGAGAGCCCAGGGAACTTCCCTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077780.14 ENSMUST00000145131.8 ENSMUST00000165241.8 |
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| CDS CAA 72 bp | ACCGAATTCCTTCCGTTCTTCTCCTGTGCGACCTCCTaGATGAATGCAGCCATCTGTGCCACAAGGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: TEFLPFFSCATS*MNAAICATRGA Trigger: GGCTCCCCTTGTGGCACAGATGGCTGCATTCATCAAGGAGGTCGCACAGGAGAAGAACGGAAGGAATTCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077780.14 ENSMUST00000165241.8 |
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| CDS TCA 72 bp | TTACCACAGAGTTTTGACTCGTGGTTAAGTCGTCCGTaGCCCACTGCCAGATTTGCCAGCAGGGAAGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LPQSFDSWLSRP*PTARFASREGL Trigger: AAGCCCTTCCCTGCTGGCAAATCTGGCAGTGGGTCACGGACGACTTAACCACGAGTCAAAACTCTGTGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077780.14 ENSMUST00000145131.8 ENSMUST00000165241.8 |
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| CDS CAA 90 bp | TTGGTGAGGATCCGAGCTGGAGAGATCGGTAACGGCTTCTCTGTGTaGGGAGCTTTTCTGTCTAGTGTGAATCCCTCCATTCTGGTCGAA | + |
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Preference number: 6 (lower is better) Translates to: LVRIRAGEIGNGFSV*GAFLSSVNPSILVE Trigger: TTCGACCAGAATGGAGGGATTCACACTAGACAGAAAAGCTCCCAACACAGAGAAGCCGTTACCGATCTCTCCAGCTCGGATCCTCACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077780.14 ENSMUST00000165241.8 |
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| CDS TCA 72 bp | ACGGCTTCTCTGTGTTGGGAGCTTTTCTGTCTAGTGTaGATCCCTCCATTCTGGTCGAATGGCACCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: TASLCWELFCLV*IPPFWSNGTTS Trigger: GGAAGTGGTGCCATTCGACCAGAATGGAGGGATTCACACTAGACAGAAAAGCTCCCAACACAGAGAAGCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077780.14 ENSMUST00000165241.8 |
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| CDS CAA 72 bp | ATCCGAGCTGGAGAGATCGGTAACGGCTTCTCTGTGTaGGGAGCTTTTCTGTCTAGTGTGAATCCCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: IRAGEIGNGFSV*GAFLSSVNPSI Trigger: AATGGAGGGATTCACACTAGACAGAAAAGCTCCCAACACAGAGAAGCCGTTACCGATCTCTCCAGCTCGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077780.14 ENSMUST00000165241.8 |
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| CDS CCA 72 bp | CTCTCAAAGTGGGAAGTGGGGGCCTTCCGGAGTGGATaGGAACACTTATTGTATGACTCTTTATATAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LSKWEVGAFRSG*EHLLYDSLYSS Trigger: AGAACTATATAAAGAGTCATACAATAAGTGTTCCCATCCACTCCGGAAGGCCCCCACTTCCCACTTTGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077780.14 ENSMUST00000145131.8 ENSMUST00000165241.8 |
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| CDS CAA 72 bp | GAAGTGGGGGCCTTCCGGAGTGGATGGGAACACTTATaGTATGACTCTTTATATAGTTCTCATCTACAGAAA | + |
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Preference number: 6 (lower is better) Translates to: EVGAFRSGWEHL*YDSLYSSHLQK Trigger: TTTCTGTAGATGAGAACTATATAAAGAGTCATACAATAAGTGTTCCCATCCACTCCGGAAGGCCCCCACTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077780.14 ENSMUST00000145131.8 ENSMUST00000165241.8 |
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