Pregenerated sensors for ZFP607B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057093Ensembl transcript IDs: ENSMUST00000076421.7, ENSMUST00000120004.8
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGCAATAACAAGCCACACTTTCATTCCCCTTAACAAGTTTGTTTaGCCCAACTATACCAGATGTTCTTCATCACAGGTTGGAGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: WAITSHTFIPLNKFV*PNYTRCSSSQVGEE Trigger: TTCCTCTCCAACCTGTGATGAAGAACATCTGGTATAGTTGGGGCAAACAAACTTGTTAAGGGGAATGAAAGTGTGGCTTGTTATTGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTTTCATTTCCATTACAGTAACGCCCGTGAGAGCACCAACACTGTAGAAGCTCACCACACCCGGCAGTaGTGTGGTCTTATTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: VFHFHYSNARESTNTVEAHHTRQ*CGLILH Trigger: GTGGAGAATAAGACCACACCACTGCCGGGTGTGGTG...AGCTTCTACAGTGTTGGTGCTCTCACGGGCGTTACTGTAATGGAAATGAAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTTTCATTTCCATTACAGTAACGCCCGTGAGAGCACCAACACTGTAGAAGCTCCTGCTTGTACCTGGTaGAAAATACAGCGGCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: VFHFHYSNARESTNTVEAPACTW*KIQRPC Trigger: ACAAGGCCGCTGTATTTTCCACCAGGTACAAGCAGG...AGCTTCTACAGTGTTGGTGCTCTCACGGGCGTTACTGTAATGGAAATGAAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGTGTGTAGTAAAGGCTGAACTAAATCTAAACATTATCCGCATTTCCTACCTGGAAACCCAAAGCTaGACCTGGCCAGGGAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LQCVVKAELNLNIIRISYLETQS*TWPGSP Trigger: TGGACTCCCTGGCCAGGTCCAGCTTTGGGTTTCCAG...GTAGGAAATGCGGATAATGTTTAGATTTAGTTCAGCCTTTACTACACACTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGTCCACTTCCCTTACATGCACAGGACTTCTGAACATGGATTTTCTGATTTTGCCTATCTAAGCCCCTaGAAGGTGGGACTCATGGTT | + |
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Preference number: 2 (lower is better) Translates to: LVHFPYMHRTSEHGFSDFAYLSP*KVGLMV Trigger: AACCATGAGTCCCACCTTGCAGGGGCTTAGATAGGC...AAAATCAGAAAATCCATGTTCAGAAGTCCTGTGCATGTAAGGGAAGTGGACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR GCA 90 bp | TCAACAGCTGCAGGGGAAGCTTTTGCACAAGCAGGCAGTTTAACAGAAGCCAAGACAAGTCAGATTATATaGTTACCCCTGCTTGTACCT | + |
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Preference number: 2 (lower is better) Translates to: STAAGEAFAQAGSLTEAKTSQII*LPLLVP Trigger: AGGTACAAGCAGGGGTAAGCATATAATCTGACTTGT...CTTGGCTTCTGTTAAACTGCCTGCTTGTGCAAAAGCTTCCCCTGCAGCTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTCATTTCCATTACAGTAACGCCCGTGAGAGCACCAACACTGTAGAAGCTAGGTCAAATAGTTCCTaGAATACTGCAGGCTATTGT | + |
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Preference number: 2 (lower is better) Translates to: VFHFHYSNARESTNTVEARSNSS*NTAGYC Trigger: ACAATAGCCTGCAGTATTTCAGGAACTATTTGACCT...AGCTTCTACAGTGTTGGTGCTCTCACGGGCGTTACTGTAATGGAAATGAAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR CAA 90 bp | ACAAGTTTGTTTGCCCCAACTATACCAGATGTTCTTCATCACAGGTaGGAGAGGAAGCCCATGAGAAGGAAATATATTAGGAAGTACCCA | + |
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Preference number: 2 (lower is better) Translates to: TSLFAPTIPDVLHHR*ERKPMRRKYIRKYP Trigger: TGGGTACTTCCTAATATATTTCCTTCTCATGGGCTTCCTCTCCAACCTGTGATGAAGAACATCTGGTATAGTTGGGGCAAACAAACTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR CCA 90 bp | ACACGTCTGCCTGGTACCATGCTCACCATTAACAAATTATGCCGAAAGAAACATGCAGGCTATTGTTTATaGGCAATAACAAGCCACACT | + |
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Preference number: 2 (lower is better) Translates to: TRLPGTMLTINKLCRKKHAGYCL*AITSHT Trigger: AGTGTGGCTTGTTATTGCCCATAAACAATAGCCTGC...ATGTTTCTTTCGGCATAATTTGTTAATGGTGAGCATGGTACCAGGCAGACGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAGATGGAGGAGACTGCACTGTCTTTCCCTGTCACAAATGTCTTTTATCTTAGGAATGGATTGGGAATaGAGATTTTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: MRWRRLHCLSLSQMSFILGMDWE*RFCVCV Trigger: CACACACACACAAAATCTTCATTCCCAATCCATTCC...TAAGATAAAAGACATTTGTGACAGGGAAAGACAGTGCAGTCTCCTCCATCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAGATGGAGGAGACTGCACTGTCTTTCCCTGTCACAAATGTCTTTTATCTTAGGCTTCTTGCCAGTATaGATTCTAAAATGTCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: MRWRRLHCLSLSQMSFILGFLPV*ILKCPR Trigger: TCTTGGACATTTTAGAATTCATACTGGCAAGAAGCC...TAAGATAAAAGACATTTGTGACAGGGAAAGACAGTGCAGTCTCCTCCATCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCAGTGTGTAGTAAAGGCTGAACTAAATCTAAACATTATCCGCATTTCCTACTGGAGAGGAAGCCCATaGGAAGGAAATATATTAGGA | + |
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Preference number: 2 (lower is better) Translates to: LQCVVKAELNLNIIRISYWRGSP*EGNILG Trigger: TCCTAATATATTTCCTTCTCATGGGCTTCCTCTCCA...GTAGGAAATGCGGATAATGTTTAGATTTAGTTCAGCCTTTACTACACACTGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGTTCCCACATTCCTTTGCAGTCATGTTTGACACCAGCATGGATTATTTTTTATATGCTTACCCCTaGTTGTACCTGGTGGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: SLFPHSFAVMFDTSMDYFLYAYP*LYLVEN Trigger: ATTTTCCACCAGGTACAAGCAGGGGTAAGCATATAA...AAAATAATCCATGCTGGTGTCAAACATGACTGCAAAGGAATGTGGGAACAGAGA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR CAA 90 bp | ACATCTCTGCACAAAAGCTTAAGGAATGGATTGGGAATGAAGATTTaGTGTGTGTGTGTACCTGTTCATCTATTAGATTTTACCCATAGG | + |
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Preference number: 2 (lower is better) Translates to: TSLHKSLRNGLGMKI*CVCVPVHLLDFTHR Trigger: CCTATGGGTAAAATCTAATAGATGAACAGGTACACACACACACAAAATCTTCATTCCCAATCCATTCCTTAAGCTTTTGTGCAGAGATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR CAA 90 bp | TCAACAGCTGCAGGGGAAGCTTTTGCACAAGCAGGCAGTTTAACAGAAGCCAAGGAGCATGGTGGCAGTTaGACAGAAGCCATGATAAAT | + |
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Preference number: 3 (lower is better) Translates to: STAAGEAFAQAGSLTEAKEHGGS*TEAMIN Trigger: ATTTATCATGGCTTCTGTCAAACTGCCACCATGCTC...CTTGGCTTCTGTTAAACTGCCTGCTTGTGCAAAAGCTTCCCCTGCAGCTGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR CAA 90 bp | ATGAGATGGAGGAGACTGCACTGTCTTTCCCTGTCACAAATGTCTTTTATCTTAGAAAATACAGCGGCCTaGTGGGGGTGCCTATCTAAG | + |
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Preference number: 3 (lower is better) Translates to: MRWRRLHCLSLSQMSFILENTAA*WGCLSK Trigger: CTTAGATAGGCACCCCCACAAGGCCGCTGTATTTTC...TAAGATAAAAGACATTTGTGACAGGGAAAGACAGTGCAGTCTCCTCCATCTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCACTGTCTTTCCCTGTCACAAATGTCTTTTATCTTAATGTCTGGGCAGAGAGTTCTTCATCACAGGTaGGAGAGGAAGCCCATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LHCLSLSQMSFILMSGQRVLHHR*ERKPMR Trigger: TCTCATGGGCTTCCTCTCCAACCTGTGATGAAGAAC...TCTCTGCCCAGACATTAAGATAAAAGACATTTGTGACAGGGAAAGACAGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR GCA 72 bp | CTAAGTAGGAAACAAGTCAGATTATATGCTTACCCCTaGTTGTACCTGGTGGAAAATACAGCGGCCTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: LSRKQVRLYAYP*LYLVENTAALW Trigger: CCACAAGGCCGCTGTATTTTCCACCAGGTACAAGCAGGGGTAAGCATATAATCTGACTTGTTTCCTACTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR CAA 90 bp | GTCTTTCATTTCCATTACAGTAACGCCCGTGAGAGCACCAACACTGTAGAAGCTAAGCCTACTTCAAACTaGGCTTTAAACTGTGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: VFHFHYSNARESTNTVEAKPTSN*ALNCGV Trigger: CACACCACAGTTTAAAGCCAAGTTTGAAGTAGGCTT...AGCTTCTACAGTGTTGGTGCTCTCACGGGCGTTACTGTAATGGAAATGAAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCACTGTCTTTCCCTGTCACAAATGTCTTTTATCTTAATGTCTGGGCAGAGACCCATAGGGAAGTATTaGGAATTTAACACTGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: LHCLSLSQMSFILMSGQRPIGKY*EFNTGG Trigger: TCCTCCAGTGTTAAATTCCAAATACTTCCCTATGGG...TCTCTGCCCAGACATTAAGATAAAAGACATTTGTGACAGGGAAAGACAGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR GCA 72 bp | ACAAGCCACACTTTCATTCCCCTTAACAAGTTTGTTTaGCCCAACTATACCAGATGTTCTTCATCACAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TSHTFIPLNKFV*PNYTRCSSSQV Trigger: AACCTGTGATGAAGAACATCTGGTATAGTTGGGGCAAACAAACTTGTTAAGGGGAATGAAAGTGTGGCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR GCA 72 bp | ATTATAACCCTGTTTCCACACGTCTGCCTGGTACCATaGTCACCATTAACAAATTATGCCGAAAGAAACATC | + |
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Preference number: 3 (lower is better) Translates to: IITLFPHVCLVP*SPLTNYAERNI Trigger: GATGTTTCTTTCGGCATAATTTGTTAATGGTGAGCATGGTACCAGGCAGACGTGTGGAAACAGGGTTATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR GCA 72 bp | TATTCTCTATCCATTATAACCCTGTTTCCACACGTCTaGCTGGTACCATGCTCACCATTAACAAATTATGCC | + |
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Preference number: 3 (lower is better) Translates to: YSLSIITLFPHV*LVPCSPLTNYA Trigger: GGCATAATTTGTTAATGGTGAGCATGGTACCAGGCAGACGTGTGGAAACAGGGTTATAATGGATAGAGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR CCA 72 bp | ACAGACTTTCGGCACACTCATTCTCAAAGGGTTTCTTaGCACGAAGAGCATATGAATATTCAGATATTGACC | + |
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Preference number: 3 (lower is better) Translates to: TDFRHTHSQRVS*HEEHMNIQILT Trigger: GGTCAATATCTGAATATTCATATGCTCTTCGTGCCAAGAAACCCTTTGAGAATGAGTGTGCCGAAAGTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR TCA 90 bp | TCAACAGCTGCAGGGGAAGCTTTTGCACAAGCAGGCAGTTTAACAGAAGCCAAGGCTCTTGGGGGAGTCTaGAGGCCTTCCCACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: STAAGEAFAQAGSLTEAKALGGV*RPSHTP Trigger: AGGAGTGTGGGAAGGCCTTCAGACTCCCCCAAGAGC...CTTGGCTTCTGTTAAACTGCCTGCTTGTGCAAAAGCTTCCCCTGCAGCTGTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR TCA 90 bp | TCAACAGCTGCAGGGGAAGCTTTTGCACAAGCAGGCAGTTTAACAGAAGCCAAGGCTGTGCCAGAACAATaGAGGCCTTCCCACAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: STAAGEAFAQAGSLTEAKAVPEQ*RPSHSP Trigger: AGGACTGTGGGAAGGCCTTCATTGTTCTGGCACAGC...CTTGGCTTCTGTTAAACTGCCTGCTTGTGCAAAAGCTTCCCCTGCAGCTGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR GCA 90 bp | GTCTTTCATTTCCATTACAGTAACGCCCGTGAGAGCACCAACACTGTAGAAGCTGTGCTGAGCGAGCTGTaGCAGAACAATGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: VFHFHYSNARESTNTVEAVLSEL*QNNEGL Trigger: AAGGCCTTCATTGTTCTGGCACAGCTCGCTCAGCAC...AGCTTCTACAGTGTTGGTGCTCTCACGGGCGTTACTGTAATGGAAATGAAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR TCA 90 bp | ATTCCCCTTAACAAGTTTGTTTGCCCCAACTATACCAGATGTTCTTCATCACAGTGGTGTCGTGTGAGCTaGGCCAGAACAGTGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: IPLNKFVCPNYTRCSSSQWCRVS*ARTVKA Trigger: GGCCTTCACTGTTCTGGCTCAGCTCACACGACACCA...CTGTGATGAAGAACATCTGGTATAGTTGGGGCAAACAAACTTGTTAAGGGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR CCA 90 bp | ATTCCCCTTAACAAGTTTGTTTGCCCCAACTATACCAGATGTTCTTCATCACAGTGCCTTGTGAGCTCTTaGGGGAGTCTGAAGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: IPLNKFVCPNYTRCSSSQCLVSS*GSLKAF Trigger: GAAGGCCTTCAGACTCCCCCAAGAGCTCACAAGGCA...CTGTGATGAAGAACATCTGGTATAGTTGGGGCAAACAAACTTGTTAAGGGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR TCA 90 bp | ACTATACCAGATGTTCTTCATCACAGGTTGGAGAGGAAGCCCATGAGAAGGAAAGGTGTCTTACCACTATaGAATCTCTGGTGTCGAATG | + |
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Preference number: 4 (lower is better) Translates to: TIPDVLHHRLERKPMRRKGVLPL*NLWCRM Trigger: CATTCGACACCAGAGATTTCATAGTGGTAAGACACC...TTTCCTTCTCATGGGCTTCCTCTCCAACCTGTGATGAAGAACATCTGGTATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR TCA 90 bp | ACTATACCAGATGTTCTTCATCACAGGTTGGAGAGGAAGCCCATGAGAAGGAAAAGCTGGCTGGAAAAATaGAAGCCCTTTCCACATTCA | + |
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Preference number: 4 (lower is better) Translates to: TIPDVLHHRLERKPMRRKSWLEK*KPFPHS Trigger: TGAATGTGGAAAGGGCTTTCATTTTTCCAGCCAGCT...TTTCCTTCTCATGGGCTTCCTCTCCAACCTGTGATGAAGAACATCTGGTATAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR TCA 90 bp | GTCTTTCATTTCCATTACAGTAACGCCCGTGAGAGCACCAACACTGTAGAAGCTGATTTCTTTCCAGTATaGATAGTGTGGTGTCGTGTG | + |
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Preference number: 4 (lower is better) Translates to: VFHFHYSNARESTNTVEADFFPV*IVWCRV Trigger: CACACGACACCACACTATTCATACTGGAAAGAAATC...AGCTTCTACAGTGTTGGTGCTCTCACGGGCGTTACTGTAATGGAAATGAAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR CCA 90 bp | GTCTTTCATTTCCATTACAGTAACGCCCGTGAGAGCACCAACACTGTAGAAGCTGTATGGACTCTTTGGTaGATTCTAAGAGCTGTACCA | + |
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Preference number: 4 (lower is better) Translates to: VFHFHYSNARESTNTVEAVWTLW*ILRAVP Trigger: TGGTACAGCTCTTAGAATCCACCAAAGAGTCCATAC...AGCTTCTACAGTGTTGGTGCTCTCACGGGCGTTACTGTAATGGAAATGAAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR CCA 90 bp | ACACGTCTGCCTGGTACCATGCTCACCATTAACAAATTATGCCGAAAGAAACATAGGGCCTCACCAGTATaGACTCTTTGGTGGATTCTA | + |
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Preference number: 4 (lower is better) Translates to: TRLPGTMLTINKLCRKKHRASPV*TLWWIL Trigger: TAGAATCCACCAAAGAGTCCATACTGGTGAGGCCCT...ATGTTTCTTTCGGCATAATTTGTTAATGGTGAGCATGGTACCAGGCAGACGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR TCA 90 bp | TCACCTGGCCAGTATTTACTTAAAGCCTACTTCAAACTTGGCTTTAAACTGTGGATCCCTAAATGTCACTaGCCCACAGACCATGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SPGQYLLKAYFKLGFKLWIPKCH*PTDHVL Trigger: CAACACATGGTCTGTGGGTCAGTGACATTTAGGGAT...CCACAGTTTAAAGCCAAGTTTGAAGTAGGCTTTAAGTAAATACTGGCCAGGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR TCA 90 bp | TCACCTGGCCAGTATTTACTTAAAGCCTACTTCAAACTTGGCTTTAAACTGTGGGCCTTTTCTGTATTGTaGGCAAGAGTCTGGCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: SPGQYLLKAYFKLGFKLWAFSVL*ARVWQV Trigger: TACCTGCCAGACTCTTGCTCACAATACAGAAAAGGC...CCACAGTTTAAAGCCAAGTTTGAAGTAGGCTTTAAGTAAATACTGGCCAGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR TCA 90 bp | TCACCTGGCCAGTATTTACTTAAAGCCTACTTCAAACTTGGCTTTAAACTGTGGAGCAGGTCGGGAAGATaGAAAGCCTTTCCACATTCA | + |
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Preference number: 4 (lower is better) Translates to: SPGQYLLKAYFKLGFKLWSRSGR*KAFPHS Trigger: TGAATGTGGAAAGGCTTTTCATCTTCCCGACCTGCT...CCACAGTTTAAAGCCAAGTTTGAAGTAGGCTTTAAGTAAATACTGGCCAGGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR TCA 90 bp | AAAAATATGAGATGGAGGAGACTGCACTGTCTTTCCCTGTCACAAATGTCTTTTGGCTGCAGATGCGCTTaGAAGACTTCCCACATTCTT | + |
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Preference number: 4 (lower is better) Translates to: KNMRWRRLHCLSLSQMSFGCRCA*KTSHIL Trigger: AAGAATGTGGGAAGTCTTTCAAGCGCATCTGCAGCC...AAAAGACATTTGTGACAGGGAAAGACAGTGCAGTCTCCTCCATCTCATATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR GCA 90 bp | TCTCTGTTCCCACATTCCTTTGCAGTCATGTTTGACACCAGCATGGATTATTTTCAGGGCTCTTTCTCCTaGTCTAGTAAGACGATCAGA | + |
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Preference number: 4 (lower is better) Translates to: SLFPHSFAVMFDTSMDYFQGSFS*SSKTIR Trigger: TCTGATCGTCTTACTAGAGCAGGAGAAAGAGCCCTG...AAAATAATCCATGCTGGTGTCAAACATGACTGCAAAGGAATGTGGGAACAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR CCA 90 bp | TCAACAGCTGCAGGGGAAGCTTTTGCACAAGCAGGCAGTTTAACAGAAGCCAAGTTCCTTGCACTGAAATaGTTTCACATCATCATGAAT | + |
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Preference number: 4 (lower is better) Translates to: STAAGEAFAQAGSLTEAKFLALK*FHIIMN Trigger: ATTCATGATGATGTGAAACCATTTCAGTGCAAGGAA...CTTGGCTTCTGTTAAACTGCCTGCTTGTGCAAAAGCTTCCCCTGCAGCTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR CAA 72 bp | TTTGCCCCAACTATACCAGATGTTCTTCATCACAGGTaGGAGAGGAAGCCCATGAGAAGGAAATATATTAGG | + |
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Preference number: 4 (lower is better) Translates to: FAPTIPDVLHHR*ERKPMRRKYIR Trigger: CCTAATATATTTCCTTCTCATGGGCTTCCTCTCCAACCTGTGATGAAGAACATCTGGTATAGTTGGGGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR TCA 90 bp | ATTCCCCTTAACAAGTTTGTTTGCCCCAACTATACCAGATGTTCTTCATCACAGGGTTTCACAGCAGCATaGATAACCCCATGTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: IPLNKFVCPNYTRCSSSQGFTAA*ITPCSK Trigger: TTTGGAACATGGGGTTATTCATGCTGCTGTGAAACC...CTGTGATGAAGAACATCTGGTATAGTTGGGGCAAACAAACTTGTTAAGGGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR GCA 90 bp | ACACGTCTGCCTGGTACCATGCTCACCATTAACAAATTATGCCGAAAGAAACATAAGGCTGACCCACACTaGTCACATTCATATGATTTC | + |
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Preference number: 4 (lower is better) Translates to: TRLPGTMLTINKLCRKKHKADPH*SHSYDF Trigger: GAAATCATATGAATGTGAGCAGTGTGGGTCAGCCTT...ATGTTTCTTTCGGCATAATTTGTTAATGGTGAGCATGGTACCAGGCAGACGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR TCA 90 bp | AAAAATATGAGATGGAGGAGACTGCACTGTCTTTCCCTGTCACAAATGTCTTTTCCACATTCCTTGCACTaGAATGGTTTCACATCATCA | + |
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Preference number: 4 (lower is better) Translates to: KNMRWRRLHCLSLSQMSFPHSLH*NGFTSS Trigger: TGATGATGTGAAACCATTTCAGTGCAAGGAATGTGG...AAAAGACATTTGTGACAGGGAAAGACAGTGCAGTCTCCTCCATCTCATATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR TCA 90 bp | CTCCAGTGTGTAGTAAAGGCTGAACTAAATCTAAACATTATCCGCATTTCCTACGGTCAAAAGTTTTACTaGATTGCCTTATGCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LQCVVKAELNLNIIRISYGQKFY*IALCSV Trigger: AACAGAGCATAAGGCAATTCAGTAAAACTTTTGACC...GTAGGAAATGCGGATAATGTTTAGATTTAGTTCAGCCTTTACTACACACTGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR CAA 72 bp | CCTTTAAAGAGTACTTATTCACCAACAGCTGTGTTTTaGACATCTCTGCACAAAAGCTTAAGGAATGGATTG | + |
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Preference number: 4 (lower is better) Translates to: PLKSTYSPTAVF*TSLHKSLRNGL Trigger: CAATCCATTCCTTAAGCTTTTGTGCAGAGATGTCAAAAACACAGCTGTTGGTGAATAAGTACTCTTTAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| 3UTR CAA 72 bp | CACAAAAGCTTAAGGAATGGATTGGGAATGAAGATTTaGTGTGTGTGTGTACCTGTTCATCTATTAGATTTT | + |
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Preference number: 4 (lower is better) Translates to: HKSLRNGLGMKI*CVCVPVHLLDF Trigger: AAAATCTAATAGATGAACAGGTACACACACACACAAAATCTTCATTCCCAATCCATTCCTTAAGCTTTTGTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR CAA 90 bp | CTGCACTGTCTTTCCCTGTCACAAATGTCTTTTATCTTAATGTCTGGGCAGAGAAGGCTGCAGATGCGCTaGAAAGACTTCCCACATTCT | + |
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Preference number: 5 (lower is better) Translates to: LHCLSLSQMSFILMSGQRRLQMR*KDFPHS Trigger: AGAATGTGGGAAGTCTTTCAAGCGCATCTGCAGCCT...TCTCTGCCCAGACATTAAGATAAAAGACATTTGTGACAGGGAAAGACAGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR CAA 90 bp | TCACCTGGCCAGTATTTACTTAAAGCCTACTTCAAACTTGGCTTTAAACTGTGGACGATCAGATCTGGCTaGGAAATACAACGTCCCACC | + |
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Preference number: 5 (lower is better) Translates to: SPGQYLLKAYFKLGFKLWTIRSG*EIQRPT Trigger: GGTGGGACGTTGTATTTCCAAGCCAGATCTGATCGT...CCACAGTTTAAAGCCAAGTTTGAAGTAGGCTTTAAGTAAATACTGGCCAGGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR CAA 90 bp | TCAACAGCTGCAGGGGAAGCTTTTGCACAAGCAGGCAGTTTAACAGAAGCCAAGTGCCTTATGCTCTGTTaGTGTAAATTTACATCAGAC | + |
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Preference number: 5 (lower is better) Translates to: STAAGEAFAQAGSLTEAKCLMLC*CKFTSD Trigger: GTCTGATGTAAATTTACACAAACAGAGCATAAGGCA...CTTGGCTTCTGTTAAACTGCCTGCTTGTGCAAAAGCTTCCCCTGCAGCTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS-3UTR CAA 90 bp | TCTCTGTTCCCACATTCCTTTGCAGTCATGTTTGACACCAGCATGGATTATTTTACCAGTATGGACTCTTaGGTGGATTCTAAGAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SLFPHSFAVMFDTSMDYFTSMDS*VDSKSC Trigger: ACAGCTCTTAGAATCCACCAAAGAGTCCATACTGGT...AAAATAATCCATGCTGGTGTCAAACATGACTGCAAAGGAATGTGGGAACAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120004.8 |
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| CDS TCA 90 bp | CTGAATTGCCTTATGCTCTGTTTGTGTAAATTTACATCAGACATATaGTTCTCCGGAGATATATTTTCAGCTTCAACACATGTCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: LNCLMLCLCKFTSDI*FSGDIFSASTHVST Trigger: TGTGGAGACATGTGTTGAAGCTGAAAATATATCTCCGGAGAATCATATGTCTGATGTAAATTTACACAAACAGAGCATAAGGCAATTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076421.7 ENSMUST00000120004.8 |
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| CDS CCA 72 bp | AGATATATTTTCAGCTTCAACACATGTCTCCACATCTaGGCTCGGCCTGTCTGTTTCTTCCTTCACAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: RYIFSFNTCLHI*ARPVCFFLHSH Trigger: ATGGCTGTGAAGGAAGAAACAGACAGGCCGAGCCCAGATGTGGAGACATGTGTTGAAGCTGAAAATATATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076421.7 ENSMUST00000120004.8 |
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