Pregenerated sensors for ZFP607A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020420Ensembl transcript IDs: ENSMUST00000205534.2, ENSMUST00000205715.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCAGCTCAGTTCATATGAATCAGCAGCAGCAGCTCAATCCACTTaGATGGCAGGCCCATCCAGCAGGAACCAAAAGGCTCTGCTAATT | + |
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Preference number: 1 (lower is better) Translates to: QQLSSYESAAAAQST*MAGPSSRNQKALLI Trigger: AATTAGCAGAGCCTTTTGGTTCCTGCTGGATGGGCCTGCCATCCAAGTGGATTGAGCTGCTGCTGCTGATTCATATGAACTGAGCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| 3UTR GCA 90 bp | CCAGTCAACCCCGCTTGCTCCAGTCAACTCCACTCACTCAGTCCCTaGTCGCTCCAGCCCAAAGATTTATTTGTTATTATACATAAGTAC | + |
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Preference number: 1 (lower is better) Translates to: PVNPACSSQLHSLSP*SLQPKDLFVIIHKY Trigger: GTACTTATGTATAATAACAAATAAATCTTTGGGCTGGAGCGAGCAGGGACTGAGTGAGTGGAGTTGACTGGAGCAAGCGGGGTTGACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205534.2 |
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| 3UTR TCA 90 bp | GCAATTACAATTTTCACTGTCAGGATATCAGCAGCTCAGTTCATATaGATCAGCAGCAGCAGCTCAATCCACTTGGATGGCAGGCCCATC | + |
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Preference number: 1 (lower is better) Translates to: AITIFTVRISAAQFI*ISSSSSIHLDGRPI Trigger: GATGGGCCTGCCATCCAAGTGGATTGAGCTGCTGCTGCTGATTCATATGAACTGAGCTGCTGATATCCTGACAGTGAAAATTGTAATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| 3UTR CCA 90 bp | CGCTCCAGCCCAAAGATTTATTTGTTATTATACATAAGTACACTGTaGCTGTCTTCTGACACACCAGACGAAGGCGTTAGATCTCATTAC | + |
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Preference number: 1 (lower is better) Translates to: RSSPKIYLLLYISTL*LSSDTPDEGVRSHY Trigger: GTAATGAGATCTAACGCCTTCGTCTGGTGTGTCAGAAGACAGCCACAGTGTACTTATGTATAATAACAAATAAATCTTTGGGCTGGAGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205534.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGCTCAATCCACTTGGATGGCAGGCCCATCCAGCAGGAACCAAAAGGCTCAAGACCAGCAAAGAGTaGCAAGGCAAACCAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: QQLNPLGWQAHPAGTKRLKTSKE*QGKPKP Trigger: TGGCTTTGGTTTGCCTTGCCACTCTTTGCTGGTCTT...GAGCCTTTTGGTTCCTGCTGGATGGGCCTGCCATCCAAGTGGATTGAGCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAGGACCTCTACTCGCTCCAGTCAACCCCGCTTGCTCCAGTCAACTCCACTCTACATAAGTACACTGTaGCTGTCTTCTGACACACCA | + |
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Preference number: 2 (lower is better) Translates to: FRTSTRSSQPRLLQSTPLYISTL*LSSDTP Trigger: TGGTGTGTCAGAAGACAGCCACAGTGTACTTATGTA...GAGTGGAGTTGACTGGAGCAAGCGGGGTTGACTGGAGCGAGTAGAGGTCCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205534.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAGGACCTCTACTCGCTCCAGTCAACCCCGCTTGCTCCAGTCAACTCCACTCTCCCCAATATGCAGCTaGCTTAGCAATATTGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: FRTSTRSSQPRLLQSTPLSPICS*LSNIAK Trigger: TTTAGCAATATTGCTAAGCCAGCTGCATATTGGGGA...GAGTGGAGTTGACTGGAGCAAGCGGGGTTGACTGGAGCGAGTAGAGGTCCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205534.2 |
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| 3UTR-3UTR TCA 90 bp | TACATAAGTACACTGTGGCTGTCTTCTGACACACCAGACGAAGGCGTTAGATCTGCAGCTCAGTTCATATaGATCAGCAGCAGCAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: YISTLWLSSDTPDEGVRSAAQFI*ISSSSS Trigger: TGAGCTGCTGCTGCTGATTCATATGAACTGAGCTGC...AGATCTAACGCCTTCGTCTGGTGTGTCAGAAGACAGCCACAGTGTACTTATGTA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205534.2 |
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| 3UTR CAA 90 bp | AAGAGTGGCAAGGCAAACCAAAGCCAGAGTGTCATTCACTCTCTGTaGAGTTATACTTTTCCAAACATCACATTTCCTCTCCAGCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: KSGKANQSQSVIHSL*SYTFPNITFPLQPN Trigger: GTTTGGCTGGAGAGGAAATGTGATGTTTGGAAAAGTATAACTCAACAGAGAGTGAATGACACTCTGGCTTTGGTTTGCCTTGCCACTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| 3UTR CAA 90 bp | GTATGTGAGTACACTATAGCTGTACAGATGGTTGTGAGCCTTCATTaGGTTGTTGGGATTGAATTTTTAGGACCTCTACTCGCTCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: VCEYTIAVQMVVSLH*VVGIEFLGPLLAPV Trigger: GACTGGAGCGAGTAGAGGTCCTAAAAATTCAATCCCAACAACCAAATGAAGGCTCACAACCATCTGTACAGCTATAGTGTACTCACATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205534.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTGTCATTCACTCTCTGTTGAGTTATACTTTTCCAAACATCACATTTCCTTCCCCAATATGCAGCTaGCTTAGCAATATTGCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: QSVIHSLLSYTFPNITFPSPICS*LSNIAK Trigger: TTTAGCAATATTGCTAAGCCAGCTGCATATTGGGGA...AGGAAATGTGATGTTTGGAAAAGTATAACTCAACAGAGAGTGAATGACACTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| 3UTR GCA 72 bp | TTTTTAGGACCTCTACTCGCTCCAGTCAACCCCGCTTaGTCCAGTCAACTCCACTCACTCAGTCCCTGCTCG | + |
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Preference number: 3 (lower is better) Translates to: FLGPLLAPVNPA*SSQLHSLSPCS Trigger: CGAGCAGGGACTGAGTGAGTGGAGTTGACTGGAGCAAGCGGGGTTGACTGGAGCGAGTAGAGGTCCTAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205534.2 |
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| 3UTR TCA 72 bp | GGGTGGTTGTTGAGCCACCATGTGGTTGCTGGGATTTaGACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: GWLLSHHVVAGI*TQDLRKSSQCS Trigger: AGAGCACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCAACAACCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205534.2 |
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| 3UTR CCA 72 bp | CATATGAATCAGCAGCAGCAGCTCAATCCACTTGGATaGCAGGCCCATCCAGCAGGAACCAAAAGGCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: HMNQQQQLNPLG*QAHPAGTKRLC Trigger: GCAGAGCCTTTTGGTTCCTGCTGGATGGGCCTGCCATCCAAGTGGATTGAGCTGCTGCTGCTGATTCATATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| 3UTR GCA 72 bp | CTCATTACTTGGGTGGTTGTTGAGCCACCATGTGGTTaGTGGGATTTGAACTCAGGACCTTCGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LITWVVVEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCAACAACCACCCAAGTAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205534.2 |
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| 3UTR CCA 72 bp | AGTTCATATGAATCAGCAGCAGCAGCTCAATCCACTTaGATGGCAGGCCCATCCAGCAGGAACCAAAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: SSYESAAAAQST*MAGPSSRNQKA Trigger: AGCCTTTTGGTTCCTGCTGGATGGGCCTGCCATCCAAGTGGATTGAGCTGCTGCTGCTGATTCATATGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| 3UTR GCA 72 bp | CCCGCTTGCTCCAGTCAACTCCACTCACTCAGTCCCTaGTCGCTCCAGCCCAAAGATTTATTTGTTATTATA | + |
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Preference number: 3 (lower is better) Translates to: PACSSQLHSLSP*SLQPKDLFVII Trigger: TATAATAACAAATAAATCTTTGGGCTGGAGCGAGCAGGGACTGAGTGAGTGGAGTTGACTGGAGCAAGCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205534.2 |
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| 3UTR CCA 72 bp | CAGTGTCAGCAAAGTCCAACAAAGACCAGCAAAGAGTaGCAAGGCAAACCAAAGCCAGAGTGTCATTCACTC | + |
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Preference number: 3 (lower is better) Translates to: QCQQSPTKTSKE*QGKPKPECHSL Trigger: GAGTGAATGACACTCTGGCTTTGGTTTGCCTTGCCACTCTTTGCTGGTCTTTGTTGGACTTTGCTGACACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTCAGCAAAGTCCAACAAAGACCAGCAAAGAGTGGCAAGGCAAACCAAAGCCGCTGGCTTAGCAATATaGCTAAAGGCCTTTCCACAT | + |
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Preference number: 3 (lower is better) Translates to: VSAKSNKDQQRVARQTKAAGLAI*LKAFPH Trigger: ATGTGGAAAGGCCTTTAGCAATATTGCTAAGCCAGC...GGCTTTGGTTTGCCTTGCCACTCTTTGCTGGTCTTTGTTGGACTTTGCTGACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| 3UTR-3UTR CAA 90 bp | GAGTGGCAAGGCAAACCAAAGCCAGAGTGTCATTCACTCTCTGTTGAGTTATACGCTGGCTTAGCAATATaGCTAAAGGCCTTTCCACAT | + |
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Preference number: 3 (lower is better) Translates to: EWQGKPKPECHSLSVELYAGLAI*LKAFPH Trigger: ATGTGGAAAGGCCTTTAGCAATATTGCTAAGCCAGC...GTATAACTCAACAGAGAGTGAATGACACTCTGGCTTTGGTTTGCCTTGCCACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| 3UTR TCA 72 bp | ATTTTCACTGTCAGGATATCAGCAGCTCAGTTCATATaGATCAGCAGCAGCAGCTCAATCCACTTGGATGGC | + |
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Preference number: 3 (lower is better) Translates to: IFTVRISAAQFI*ISSSSSIHLDG Trigger: GCCATCCAAGTGGATTGAGCTGCTGCTGCTGATTCATATGAACTGAGCTGCTGATATCCTGACAGTGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| 3UTR TCA 72 bp | ACAGATGGTTGTGAGCCTTCATTTGGTTGTTGGGATTaGATTTTTAGGACCTCTACTCGCTCCAGTCAACCC | + |
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Preference number: 3 (lower is better) Translates to: TDGCEPSFGCWD*IFRTSTRSSQP Trigger: GGGTTGACTGGAGCGAGTAGAGGTCCTAAAAATTCAATCCCAACAACCAAATGAAGGCTCACAACCATCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205534.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGATATCAGCAGCTCAGTTCATATGAATCAGCAGCAGCAGCTCAATCCACTTGTCATTCACTCTCTGTaGAGTTATACTTTTCCAAAC | + |
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Preference number: 3 (lower is better) Translates to: QDISSSVHMNQQQQLNPLVIHSL*SYTFPN Trigger: GTTTGGAAAAGTATAACTCAACAGAGAGTGAATGAC...AAGTGGATTGAGCTGCTGCTGCTGATTCATATGAACTGAGCTGCTGATATCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | CAGCAGCTCAATCCACTTGGATGGCAGGCCCATCCAGCAGGAACCAAAAGGCTCGGTCTCTCATCAGTGTaGGTTTTCCGATGCTCGGAA | + |
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Preference number: 4 (lower is better) Translates to: QQLNPLGWQAHPAGTKRLGLSSV*VFRCSE Trigger: TTCCGAGCATCGGAAAACTCACACTGATGAGAGACC...GAGCCTTTTGGTTCCTGCTGGATGGGCCTGCCATCCAAGTGGATTGAGCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | GCAGCTCAATCCACTTGGATGGCAGGCCCATCCAGCAGGAACCAAAAGGCTCTGTTATCATCGCCTTCTTaGGAACTCTGTAGTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: AAQSTWMAGPSSRNQKALLSSPS*ELCSPL Trigger: CAAGGGACTACAGAGTTCTCAAGAAGGCGATGATAA...CAGAGCCTTTTGGTTCCTGCTGGATGGGCCTGCCATCCAAGTGGATTGAGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | TGGATGGCAGGCCCATCCAGCAGGAACCAAAAGGCTCTGCTAATTAGCCCCAGTGGAATGAGCCACAGCTaGATATCTTCCCACAATGCT | + |
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Preference number: 4 (lower is better) Translates to: WMAGPSSRNQKALLISPSGMSHS*ISSHNA Trigger: AGCATTGTGGGAAGATATTCAGCTGTGGCTCATTCC...ACTGGGGCTAATTAGCAGAGCCTTTTGGTTCCTGCTGGATGGGCCTGCCATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | CATGCCCTTTTACCAGGAAGCTTCCAGAAAAACACCATGTGTCTGTTCTCTGCAGCTGAGCCAGAACGATaGAGCTCTTCCCACAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: HALLPGSFQKNTMCLFSAAEPER*SSSHSP Trigger: AGGACTGTGGGAAGAGCTTCATCGTTCTGGCTCAGC...TGCAGAGAACAGACACATGGTGTTTTTCTGGAAGCTTCCTGGTAAAAGGGCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | TGGATGGCAGGCCCATCCAGCAGGAACCAAAAGGCTCTGCTAATTAGCCCCAGTTTGGTATGGATTTTCTaGTGTTCACTAAGCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: WMAGPSSRNQKALLISPSLVWIF*CSLSWS Trigger: GGACCAGCTTAGTGAACATCAGAAAATCCATACCAA...ACTGGGGCTAATTAGCAGAGCCTTTTGGTTCCTGCTGGATGGGCCTGCCATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | TCCACTCACTCAGTCCCTGCTCGCTCCAGCCCAAAGATTTATTTGTTATTATACGCTGAGCCAGAACGATaGAGCTCTTCCCACAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: STHSVPARSSPKIYLLLYAEPER*SSSHSP Trigger: AGGACTGTGGGAAGAGCTTCATCGTTCTGGCTCAGC...GTATAATAACAAATAAATCTTTGGGCTGGAGCGAGCAGGGACTGAGTGAGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205534.2 |
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| CDS-3UTR TCA 90 bp | GTGTCAGCAAAGTCCAACAAAGACCAGCAAAGAGTGGCAAGGCAAACCAAAGCCGATTTGTCTTCAGTGTaGATGTTCTGGTGCCGTGTG | + |
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Preference number: 4 (lower is better) Translates to: VSAKSNKDQQRVARQTKADLSSV*MFWCRV Trigger: CACACGGCACCAGAACATTCACACTGAAGACAAATC...GGCTTTGGTTTGCCTTGCCACTCTTTGCTGGTCTTTGTTGGACTTTGCTGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | ATTTTTAGGACCTCTACTCGCTCCAGTCAACCCCGCTTGCTCCAGTCAACTCCACACAGTCCTTACAGTTaGAGGGCTTCTTTTCACTGT | + |
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Preference number: 4 (lower is better) Translates to: IFRTSTRSSQPRLLQSTPHSPYS*RASFHC Trigger: ACAGTGAAAAGAAGCCCTTCAACTGTAAGGACTGTG...TGGAGTTGACTGGAGCAAGCGGGGTTGACTGGAGCGAGTAGAGGTCCTAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205534.2 |
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| CDS-3UTR GCA 90 bp | CAGCAGCTCAATCCACTTGGATGGCAGGCCCATCCAGCAGGAACCAAAAGGCTCAAACTGGACCCACACTaGTCACATTCAAATGATTTT | + |
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Preference number: 4 (lower is better) Translates to: QQLNPLGWQAHPAGTKRLKLDPH*SHSNDF Trigger: AAAATCATTTGAATGTGAGCAGTGTGGGTCCAGTTT...GAGCCTTTTGGTTCCTGCTGGATGGGCCTGCCATCCAAGTGGATTGAGCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | CAGGATATCAGCAGCTCAGTTCATATGAATCAGCAGCAGCAGCTCAATCCACTTAGAGTCTGGCAGGTGTaGGTGGGTATTTCTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QDISSSVHMNQQQQLNPLRVWQV*VGISSL Trigger: CAAGGAAGAAATACCCACTCACACCTGCCAGACTCT...AAGTGGATTGAGCTGCTGCTGCTGATTCATATGAACTGAGCTGCTGATATCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | TGTCACAGCATCATCAGTGAAGTCCAGTGTCAGCAAAGTCCAACAAAGACCAGCGATTTGTCTTCAGTGTaGATGTTCTGGTGCCGTGTG | + |
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Preference number: 4 (lower is better) Translates to: CHSIISEVQCQQSPTKTSDLSSV*MFWCRV Trigger: CACACGGCACCAGAACATTCACACTGAAGACAAATC...GCTGGTCTTTGTTGGACTTTGCTGACACTGGACTTCACTGATGATGCTGTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | GAAGTCCAGTGTCAGCAAAGTCCAACAAAGACCAGCAAAGAGTGGCAAGGCAAAGGAATGAGCCACAGCTaGATATCTTCCCACAATGCT | + |
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Preference number: 4 (lower is better) Translates to: EVQCQQSPTKTSKEWQGKGMSHS*ISSHNA Trigger: AGCATTGTGGGAAGATATTCAGCTGTGGCTCATTCC...TTTGCCTTGCCACTCTTTGCTGGTCTTTGTTGGACTTTGCTGACACTGGACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | GTCACAGCATCATCAGTGAAGTCCAGTGTCAGCAAAGTCCAACAAAGACCAGCATCGGAAAGGTATACCTaGAGCCTAAAAGCCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: VTASSVKSSVSKVQQRPASERYT*SLKAFP Trigger: TGGGAAGGCTTTTAGGCTTCAGGTATACCTTTCCGA...TGCTGGTCTTTGTTGGACTTTGCTGACACTGGACTTCACTGATGATGCTGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | GAGTGGCAAGGCAAACCAAAGCCAGAGTGTCATTCACTCTCTGTTGAGTTATACGGTCTCTCATCAGTGTaGGTTTTCCGATGCTCGGAA | + |
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Preference number: 4 (lower is better) Translates to: EWQGKPKPECHSLSVELYGLSSV*VFRCSE Trigger: TTCCGAGCATCGGAAAACTCACACTGATGAGAGACC...GTATAACTCAACAGAGAGTGAATGACACTCTGGCTTTGGTTTGCCTTGCCACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | CCCTTTTACCAGGAAGCTTCCAGAAAAACACCATGTGTCTGTTCTCTGCATAACAGAGTCTGGCAGGTGTaGGTGGGTATTTCTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PFYQEASRKTPCVCSLHNRVWQV*VGISSL Trigger: CAAGGAAGAAATACCCACTCACACCTGCCAGACTCT...GTTATGCAGAGAACAGACACATGGTGTTTTTCTGGAAGCTTCCTGGTAAAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR CCA 90 bp | GTGAAGTCCAGTGTCAGCAAAGTCCAACAAAGACCAGCAAAGAGTGGCAAGGCAAACTCTGTAGTCCCTTaGATGTATTATAGTTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VKSSVSKVQQRPAKSGKANSVVP*MYYSWG Trigger: GCCCCAACTATAATACATCCAAGGGACTACAGAGTT...TGCCTTGCCACTCTTTGCTGGTCTTTGTTGGACTTTGCTGACACTGGACTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | TCAGGATATCAGCAGCTCAGTTCATATGAATCAGCAGCAGCAGCTCAATCCACTTTATCATCGCCTTCTTaGGAACTCTGTAGTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SGYQQLSSYESAAAAQSTLSSPS*ELCSPL Trigger: CAAGGGACTACAGAGTTCTCAAGAAGGCGATGATAA...AGTGGATTGAGCTGCTGCTGCTGATTCATATGAACTGAGCTGCTGATATCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | TCCAACAAAGACCAGCAAAGAGTGGCAAGGCAAACCAAAGCCAGAGTGTCATTCTTGGTATGGATTTTCTaGTGTTCACTAAGCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SNKDQQRVARQTKARVSFLVWIF*CSLSWS Trigger: GGACCAGCTTAGTGAACATCAGAAAATCCATACCAA...GAATGACACTCTGGCTTTGGTTTGCCTTGCCACTCTTTGCTGGTCTTTGTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR CCA 90 bp | GAAGTCCAGTGTCAGCAAAGTCCAACAAAGACCAGCAAAGAGTGGCAAGGCAAACTCACCACATTCATATaGTTTCAAACCGGCATGGAT | + |
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Preference number: 4 (lower is better) Translates to: EVQCQQSPTKTSKEWQGKLTTFI*FQTGMD Trigger: ATCCATGCCGGTTTGAAACCATATGAATGTGGTGAG...TTTGCCTTGCCACTCTTTGCTGGTCTTTGTTGGACTTTGCTGACACTGGACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR CCA 90 bp | TGTCACAGCATCATCAGTGAAGTCCAGTGTCAGCAAAGTCCAACAAAGACCAGCGGTTTCAAACCGGCATaGATAACCCTATGTTCAATA | + |
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Preference number: 4 (lower is better) Translates to: CHSIISEVQCQQSPTKTSGFKPA*ITLCSI Trigger: TATTGAACATAGGGTTATCCATGCCGGTTTGAAACC...GCTGGTCTTTGTTGGACTTTGCTGACACTGGACTTCACTGATGATGCTGTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR GCA 90 bp | GTCACAGCATCATCAGTGAAGTCCAGTGTCAGCAAAGTCCAACAAAGACCAGCAAAACTGGACCCACACTaGTCACATTCAAATGATTTT | + |
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Preference number: 4 (lower is better) Translates to: VTASSVKSSVSKVQQRPAKLDPH*SHSNDF Trigger: AAAATCATTTGAATGTGAGCAGTGTGGGTCCAGTTT...TGCTGGTCTTTGTTGGACTTTGCTGACACTGGACTTCACTGATGATGCTGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR CCA 90 bp | TCCACTCACTCAGTCCCTGCTCGCTCCAGCCCAAAGATTTATTTGTTATTATACAACTCTGTAGTCCCTTaGATGTATTATAGTTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: STHSVPARSSPKIYLLLYNSVVP*MYYSWG Trigger: GCCCCAACTATAATACATCCAAGGGACTACAGAGTT...GTATAATAACAAATAAATCTTTGGGCTGGAGCGAGCAGGGACTGAGTGAGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205534.2 |
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| CDS-3UTR TCA 90 bp | CAGAGTGTCATTCACTCTCTGTTGAGTTATACTTTTCCAAACATCACATTTCCTGCCTTTTCTGTATTGTaGGCAAGAGTCTGGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: QSVIHSLLSYTFPNITFPAFSVL*ARVWQV Trigger: CACCTGCCAGACTCTTGCTCACAATACAGAAAAGGC...AGGAAATGTGATGTTTGGAAAAGTATAACTCAACAGAGAGTGAATGACACTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR CCA 90 bp | TCCACTCACTCAGTCCCTGCTCGCTCCAGCCCAAAGATTTATTTGTTATTATACGGTTTCAAACCGGCATaGATAACCCTATGTTCAATA | + |
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Preference number: 4 (lower is better) Translates to: STHSVPARSSPKIYLLLYGFKPA*ITLCSI Trigger: TATTGAACATAGGGTTATCCATGCCGGTTTGAAACC...GTATAATAACAAATAAATCTTTGGGCTGGAGCGAGCAGGGACTGAGTGAGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205534.2 |
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| CDS-3UTR TCA 90 bp | CAGAGTGTCATTCACTCTCTGTTGAGTTATACTTTTCCAAACATCACATTTCCTTCGGAAAGGTATACCTaGAGCCTAAAAGCCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: QSVIHSLLSYTFPNITFPSERYT*SLKAFP Trigger: TGGGAAGGCTTTTAGGCTTCAGGTATACCTTTCCGA...AGGAAATGTGATGTTTGGAAAAGTATAACTCAACAGAGAGTGAATGACACTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR TCA 90 bp | CAGAGTGTCATTCACTCTCTGTTGAGTTATACTTTTCCAAACATCACATTTCCTCACAGTCCTTACAGTTaGAGGGCTTCTTTTCACTGT | + |
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Preference number: 4 (lower is better) Translates to: QSVIHSLLSYTFPNITFPHSPYS*RASFHC Trigger: ACAGTGAAAAGAAGCCCTTCAACTGTAAGGACTGTG...AGGAAATGTGATGTTTGGAAAAGTATAACTCAACAGAGAGTGAATGACACTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| 3UTR CAA 72 bp | AAGGCAAACCAAAGCCAGAGTGTCATTCACTCTCTGTaGAGTTATACTTTTCCAAACATCACATTTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: KANQSQSVIHSL*SYTFPNITFPL Trigger: GAGAGGAAATGTGATGTTTGGAAAAGTATAACTCAACAGAGAGTGAATGACACTCTGGCTTTGGTTTGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR CAA 90 bp | GTCACAGCATCATCAGTGAAGTCCAGTGTCAGCAAAGTCCAACAAAGACCAGCACCCACAGACCATGTGTaGAGAACTGGAGCTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: VTASSVKSSVSKVQQRPAPTDHV*RTGAGH Trigger: ATGGCCAGCTCCAGTTCTCAACACATGGTCTGTGGG...TGCTGGTCTTTGTTGGACTTTGCTGACACTGGACTTCACTGATGATGCTGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR CAA 90 bp | AAGGTAAATAGGGCAAAGCCAGATGTGGACCTGTTTAGAAATAGTTCTTTGGGCCCCACAGACCATGTGTaGAGAACTGGAGCTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: KVNRAKPDVDLFRNSSLGPTDHV*RTGAGH Trigger: ATGGCCAGCTCCAGTTCTCAACACATGGTCTGTGGG...GCCCAAAGAACTATTTCTAAACAGGTCCACATCTGGCTTTGCCCTATTTACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR CAA 90 bp | TGTCACAGCATCATCAGTGAAGTCCAGTGTCAGCAAAGTCCAACAAAGACCAGCAAACTGGTAGTGGTATaGAAAGGCTTCCCCACATTT | + |
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Preference number: 5 (lower is better) Translates to: CHSIISEVQCQQSPTKTSKLVVV*KGFPTF Trigger: AAATGTGGGGAAGCCTTTCAATACCACTACCAGTTT...GCTGGTCTTTGTTGGACTTTGCTGACACTGGACTTCACTGATGATGCTGTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR CAA 90 bp | TACATGCCCTTTTACCAGGAAGCTTCCAGAAAAACACCATGTGTCTGTTCTCTGCTGATGTTGATTGAGTaGGGACTTAAGTCGGAAACT | + |
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Preference number: 5 (lower is better) Translates to: YMPFYQEASRKTPCVCSLLMLIE*GLKSET Trigger: AGTTTCCGACTTAAGTCCCAACTCAATCAACATCAG...CAGAGAACAGACACATGGTGTTTTTCTGGAAGCTTCCTGGTAAAAGGGCATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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| CDS-3UTR CAA 90 bp | AGTTCTTTGGGCAATTACAATTTTCACTGTCAGGATATCAGCAGCTCAGTTCATCTGATGTTGATTGAGTaGGGACTTAAGTCGGAAACT | + |
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Preference number: 5 (lower is better) Translates to: SSLGNYNFHCQDISSSVHLMLIE*GLKSET Trigger: AGTTTCCGACTTAAGTCCCAACTCAATCAACATCAG...ATGAACTGAGCTGCTGATATCCTGACAGTGAAAATTGTAATTGCCCAAAGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205534.2 ENSMUST00000205715.2 |
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