Pregenerated sensors for ZFP606 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030386Ensembl transcript IDs: ENSMUST00000098822.10, ENSMUST00000123589.8, ENSMUST00000151933.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATACCAACACTCCTGTCCTGTGCTCTCTGAGGAGTTACCCAGGGTaGTCTTACACTCCCAGAGCCCTGCTGGACTCCCCGTGGATCTTG | + |
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Preference number: 1 (lower is better) Translates to: HTNTPVLCSLRSYPG*SYTPRALLDSPWIL Trigger: CAAGATCCACGGGGAGTCCAGCAGGGCTCTGGGAGTGTAAGAGCACCCTGGGTAACTCCTCAGAGAGCACAGGACAGGAGTGTTGGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR CCA 90 bp | TACCCAGGGTGCTCTTACACTCCCAGAGCCCTGCTGGACTCCCCGTaGATCTTGCTGATCTTACTCTATCTACTTCCAGCTTCCAGACCC | + |
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Preference number: 1 (lower is better) Translates to: YPGCSYTPRALLDSP*ILLILLYLLPASRP Trigger: GGGTCTGGAAGCTGGAAGTAGATAGAGTAAGATCAGCAAGATCCACGGGGAGTCCAGCAGGGCTCTGGGAGTGTAAGAGCACCCTGGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR CCA 90 bp | GGATCATGGTGCCTCGTGAAGCCAACAATTCTGAGGTTTGTAGGTTaGCAACAGGAGTGCAGGCCCACCTGGGTTCTTCCTAGACTCTCC | + |
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Preference number: 1 (lower is better) Translates to: GSWCLVKPTILRFVG*QQECRPTWVLPRLS Trigger: GGAGAGTCTAGGAAGAACCCAGGTGGGCCTGCACTCCTGTTGCCAACCTACAAACCTCAGAATTGTTGGCTTCACGAGGCACCATGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR TCA 90 bp | GCTCTTACACTCCCAGAGCCCTGCTGGACTCCCCGTGGATCTTGCTaGTCTTACTCTATCTACTTCCAGCTTCCAGACCCTGATCAGACT | + |
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Preference number: 1 (lower is better) Translates to: ALTLPEPCWTPRGSC*SYSIYFQLPDPDQT Trigger: AGTCTGATCAGGGTCTGGAAGCTGGAAGTAGATAGAGTAAGATCAGCAAGATCCACGGGGAGTCCAGCAGGGCTCTGGGAGTGTAAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR TCA 90 bp | GACCTCTATGCAGACTATGTCTCATCTCTCAAGGCATCGGTGGACTaGGCTGTAGCAGAGTTTAGGGCTTCCCTCCACATCTCAGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: DLYADYVSSLKASVD*AVAEFRASLHISGF Trigger: GAAGCCTGAGATGTGGAGGGAAGCCCTAAACTCTGCTACAGCTCAGTCCACCGATGCCTTGAGAGATGAGACATAGTCTGCATAGAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR CCA 90 bp | GCCTCTCACAGCCTCTCCCCTGCACACACCTTTCCAGACAAATTCTaGATCATGGTGCCTCGTGAAGCCAACAATTCTGAGGTTTGTAGG | + |
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Preference number: 1 (lower is better) Translates to: ASHSLSPAHTFPDKF*IMVPREANNSEVCR Trigger: CCTACAAACCTCAGAATTGTTGGCTTCACGAGGCACCATGATCCAGAATTTGTCTGGAAAGGTGTGTGCAGGGGAGAGGCTGTGAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR GCA 90 bp | TACCCGTGGAGCTTCAGGCAGGCCAGACAGCTGCTTACCAGGATGTaGCCACCTGATGCATTGCTTTTACCTCTTTGCTTATTAGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: YPWSFRQARQLLTRM*PPDALLLPLCLLVK Trigger: CTTGACTAATAAGCAAAGAGGTAAAAGCAATGCATCAGGTGGGCACATCCTGGTAAGCAGCTGTCTGGCCTGCCTGAAGCTCCACGGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR GCA 90 bp | GCCTCTCCCCTGCACACACCTTTCCAGACAAATTCTGGATCATGGTaGCTCGTGAAGCCAACAATTCTGAGGTTTGTAGGTTGGCAACAG | + |
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Preference number: 1 (lower is better) Translates to: ASPLHTPFQTNSGSW*LVKPTILRFVGWQQ Trigger: CTGTTGCCAACCTACAAACCTCAGAATTGTTGGCTTCACGAGGCACCATGATCCAGAATTTGTCTGGAAAGGTGTGTGCAGGGGAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR TCA 90 bp | CAGCATTGGATCCTAGCTAACTTGTACTCTCCCGAGACTGACTCGTaGCCCGCTAGTCTTCCTAGCCTACCTTTACTGCTGATGGTTTTG | + |
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Preference number: 1 (lower is better) Translates to: QHWILANLYSPETDS*PASLPSLPLLLMVL Trigger: CAAAACCATCAGCAGTAAAGGTAGGCTAGGAAGACTAGCGGGTCACGAGTCAGTCTCGGGAGAGTACAAGTTAGCTAGGATCCAATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR CCA 90 bp | ACAGCCTCTCCCCTGCACACACCTTTCCAGACAAATTCTGGATCATaGTGCCTCGTGAAGCCAACAATTCTGAGGTTTGTAGGTTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: TASPLHTPFQTNSGS*CLVKPTILRFVGWQ Trigger: TTGCCAACCTACAAACCTCAGAATTGTTGGCTTCACGAGGCACCATGATCCAGAATTTGTCTGGAAAGGTGTGTGCAGGGGAGAGGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR TCA 90 bp | AAAATGGCTGGATCTGATGAAGAACCTAGATGTGAGGGAGAACAGTaGCAGTATTCCCATACCAACACTCCTGTCCTGTGCTCTCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: KMAGSDEEPRCEGEQ*QYSHTNTPVLCSLR Trigger: CCTCAGAGAGCACAGGACAGGAGTGTTGGTATGGGAATACTGTCACTGTTCTCCCTCACATCTAGGTTCTTCATCAGATCCAGCCATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR GCA 90 bp | TCCCAGGGACAGTGGGACTGCCATGTGATGACAGCACACTTTCAATaGAGTTCACCTGTCAGCTTTGAAACTGTAGGAGGAGGTTTTATT | + |
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Preference number: 1 (lower is better) Translates to: SQGQWDCHVMTAHFQ*SSPVSFETVGGGFI Trigger: AATAAAACCTCCTCCTACAGTTTCAAAGCTGACAGGTGAACTGCATTGAAAGTGTGCTGTCATCACATGGCAGTCCCACTGTCCCTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR GCA 90 bp | AGGACTCTCGTCCTGAGTCTTTCCTCCCATCAAGCAATCACTTCATaGAGAGAAGAGGCTAATAATGAACTCAGAGGGTACCTTGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: RTLVLSLSSHQAITS*REEANNELRGYLED Trigger: GTCTTCAAGGTACCCTCTGAGTTCATTATTAGCCTCTTCTCTGCATGAAGTGATTGCTTGATGGGAGGAAAGACTCAGGACGAGAGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| 3UTR GCA 90 bp | ACACATGGAGGCTTAGCATTTAAACACACTTGCTATTCTATCATGTaGACCGATGTTCTGATCCTAGGACTCATGTTAGGCAGCTCACAA | + |
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Preference number: 1 (lower is better) Translates to: THGGLAFKHTCYSIM*TDVLILGLMLGSSQ Trigger: TTGTGAGCTGCCTAACATGAGTCCTAGGATCAGAACATCGGTGCACATGATAGAATAGCAAGTGTGTTTAAATGCTAAGCCTCCATGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR CCA 90 bp | GCCAAGGATTATCCCATATGTATCTTTCTAACATCATTCCATTGCTaGATTGTTCTTCCTCAGAAACACTCTGTGCTGGAATCAGCGCTT | + |
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Preference number: 1 (lower is better) Translates to: AKDYPICIFLTSFHC*IVLPQKHSVLESAL Trigger: AAGCGCTGATTCCAGCACAGAGTGTTTCTGAGGAAGAACAATCCAGCAATGGAATGATGTTAGAAAGATACATATGGGATAATCCTTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR CCA 90 bp | TGTGATACATTTCTAACTGGTCGCCATATCCCAGAACTCCTAGCCTaGAGAGCCAAGGATTATCCCATATGTATCTTTCTAACATCATTC | + |
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Preference number: 1 (lower is better) Translates to: CDTFLTGRHIPELLA*RAKDYPICIFLTSF Trigger: GAATGATGTTAGAAAGATACATATGGGATAATCCTTGGCTCTCCAGGCTAGGAGTTCTGGGATATGGCGACCAGTTAGAAATGTATCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR TCA 90 bp | AATAATTCACTGATACGTACCAAACGGACACTGACACTACATTATTaGGTACTGGTTTCTGTTTCAAAACTCAGTCTCATATTTCTAGGC | + |
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Preference number: 1 (lower is better) Translates to: NNSLIRTKRTLTLHY*VLVSVSKLSLIFLG Trigger: GCCTAGAAATATGAGACTGAGTTTTGAAACAGAAACCAGTACTCAATAATGTAGTGTCAGTGTCCGTTTGGTACGTATCAGTGAATTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098822.10 ENSMUST00000151933.2 |
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| 3UTR CCA 90 bp | GAGCCAAACTATCTTAAAACTGAACTCCCTACTAGATGTGTCTCTTaGATACATTTACTCAACACCTCTGCTTCTGTTAATTCATTTGAA | + |
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Preference number: 1 (lower is better) Translates to: EPNYLKTELPTRCVS*IHLLNTSASVNSFE Trigger: TTCAAATGAATTAACAGAAGCAGAGGTGTTGAGTAAATGTATCCAAGAGACACATCTAGTAGGGAGTTCAGTTTTAAGATAGTTTGGCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098822.10 ENSMUST00000151933.2 |
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| 3UTR-3UTR TCA 90 bp | GTTACCCAGGGTGCTCTTACACTCCCAGAGCCCTGCTGGACTCCCCGTGGATCTTGTGGAGAGGCAGGGTaGCAGCAAAGCTCTGTATCA | + |
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Preference number: 2 (lower is better) Translates to: VTQGALTLPEPCWTPRGSCGEAG*QQSSVS Trigger: TGATACAGAGCTTTGCTGTCACCCTGCCTCTCCACA...AGATCCACGGGGAGTCCAGCAGGGCTCTGGGAGTGTAAGAGCACCCTGGGTAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCTCCCCTGCACACACCTTTCCAGACAAATTCTGGATCATGGTGCCTCGTGAGTGCAGGCCCACCTaGGTTCTTCCTAGACTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SLSPAHTFPDKFWIMVPRECRPT*VLPRLS Trigger: GGAGAGTCTAGGAAGAACCCAGGTGGGCCTGCACTC...ACGAGGCACCATGATCCAGAATTTGTCTGGAAAGGTGTGTGCAGGGGAGAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR-3UTR TCA 90 bp | GTTACCCAGGGTGCTCTTACACTCCCAGAGCCCTGCTGGACTCCCCGTGGATCTGGAAGGAGTAAGGGTTaGCAGCTAAAAATGGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: VTQGALTLPEPCWTPRGSGRSKG*QLKMAF Trigger: GAAAGCCATTTTTAGCTGTCAACCCTTACTCCTTCC...AGATCCACGGGGAGTCCAGCAGGGCTCTGGGAGTGTAAGAGCACCCTGGGTAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAAATGCCTAGACCAGGCAAATCCACAGAGTTGGAAATTGACGAGTGGTTTCCTCCCAGAGCCCTGCTaGACTCCCCGTGGATCTTGC | + |
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Preference number: 2 (lower is better) Translates to: IKCLDQANPQSWKLTSGFLPEPC*TPRGSC Trigger: GCAAGATCCACGGGGAGTCCAGCAGGGCTCTGGGAG...GAAACCACTCGTCAATTTCCAACTCTGTGGATTTGCCTGGTCTAGGCATTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR-3UTR GCA 90 bp | ATACCCGTGGAGCTTCAGGCAGGCCAGACAGCTGCTTACCAGGATGTGCCCACCTTGCTTTTACCTCTTTaGTTATTAGTCAAGGTAACG | + |
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Preference number: 2 (lower is better) Translates to: IPVELQAGQTAAYQDVPTLLLPL*LLVKVT Trigger: CGTTACCTTGACTAATAAGCAAAGAGGTAAAAGCAA...GGTGGGCACATCCTGGTAAGCAGCTGTCTGGCCTGCCTGAAGCTCCACGGGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAAATGCCTAGACCAGGCAAATCCACAGAGTTGGAAATTGACGAGTGGTTTCCTGTCCTGTGCTCTCTaGGGAGTTACCCAGGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: IKCLDQANPQSWKLTSGFLSCAL*GVTQGA Trigger: AGCACCCTGGGTAACTCCTCAGAGAGCACAGGACAG...GAAACCACTCGTCAATTTCCAACTCTGTGGATTTGCCTGGTCTAGGCATTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR CAA 90 bp | CTGGATTGTTCTTCCTCAGAAACACTCTGTGCTGGAATCAGCGCTTaGCTTTCAGTATTCCTCATCCACTCTGGACAACTGCTTTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: LDCSSSETLCAGISA*LSVFLIHSGQLLLG Trigger: TCCTAAAAGCAGTTGTCCAGAGTGGATGAGGAATACTGAAAGCAAAGCGCTGATTCCAGCACAGAGTGTTTCTGAGGAAGAACAATCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGATGGTTTTGTCACAGGATGTGGAAATGATGTTCATATTGTGACAGCACTGCTGGACTCCCCGTaGATCTTGCTGATCTTACTC | + |
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Preference number: 2 (lower is better) Translates to: TADGFVTGCGNDVHIVTALLDSP*ILLILL Trigger: GAGTAAGATCAGCAAGATCCACGGGGAGTCCAGCAG...TGCTGTCACAATATGAACATCATTTCCACATCCTGTGACAAAACCATCAGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGCTGATGGTTTTGTCACAGGATGTGGAAATGATGTTCATATTGTGACAGCACTGCTTACCAGGATGTaGCCACCTGATGCATTGCTT | + |
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Preference number: 2 (lower is better) Translates to: TADGFVTGCGNDVHIVTALLTRM*PPDALL Trigger: AAGCAATGCATCAGGTGGGCACATCCTGGTAAGCAG...TGCTGTCACAATATGAACATCATTTCCACATCCTGTGACAAAACCATCAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTGATGGTTTTGTCACAGGATGTGGAAATGATGTTCATATTGTGACAGCAGATATGCAACTTCTGTaGAAGGGCCATTTGACCTCC | + |
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Preference number: 2 (lower is better) Translates to: TADGFVTGCGNDVHIVTADMQLL*KGHLTS Trigger: GGAGGTCAAATGGCCCTTTCACAGAAGTTGCATATC...TGCTGTCACAATATGAACATCATTTCCACATCCTGTGACAAAACCATCAGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCAACAGTCAAAGAACAAACACTCTTGCCTCTGCTTTGTCAGGGGCACGTCTCATGTTTCTCAAATATaGATTCCTTGTGGACCACAT | + |
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Preference number: 2 (lower is better) Translates to: FQQSKNKHSCLCFVRGTSHVSQI*IPCGPH Trigger: ATGTGGTCCACAAGGAATCCATATTTGAGAAACATG...AGACGTGCCCCTGACAAAGCAGAGGCAAGAGTGTTTGTTCTTTGACTGTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| 3UTR-3UTR CCA 90 bp | AGGGTATACAGGCTGAACAGACTGGCAAAAGGCTTTATTATAATCACTATTTTCCCAGAACTCCTAGCCTaGAGAGCCAAGGATTATCCC | + |
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Preference number: 2 (lower is better) Translates to: RVYRLNRLAKGFIIITIFPELLA*RAKDYP Trigger: GGGATAATCCTTGGCTCTCCAGGCTAGGAGTTCTGG...GAAAATAGTGATTATAATAAAGCCTTTTGCCAGTCTGTTCAGCCTGTATACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR-3UTR GCA 90 bp | GTACCTAGACCCTCCCCTTGTATTATCAGAATCTGTTTCTATCATTATGCACAACTCAGAAACACTCTGTaGTGGAATCAGCGCTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: VPRPSPCIIRICFYHYAQLRNTL*WNQRFA Trigger: AGCAAAGCGCTGATTCCAGCACAGAGTGTTTCTGAG...TTGTGCATAATGATAGAAACAGATTCTGATAATACAAGGGGAGGGTCTAGGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR-3UTR CCA 90 bp | ATTAAATGCCTAGACCAGGCAAATCCACAGAGTTGGAAATTGACGAGTGGTTTCTTTCCAGACAAATTCTaGATCATGGTGCCTCGTGAA | + |
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Preference number: 2 (lower is better) Translates to: IKCLDQANPQSWKLTSGFFPDKF*IMVPRE Trigger: TTCACGAGGCACCATGATCCAGAATTTGTCTGGAAA...GAAACCACTCGTCAATTTCCAACTCTGTGGATTTGCCTGGTCTAGGCATTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR-3UTR CCA 90 bp | GTACCTAGACCCTCCCCTTGTATTATCAGAATCTGTTTCTATCATTATGCACAAAGAAACACTCTGTGCTaGAATCAGCGCTTTGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: VPRPSPCIIRICFYHYAQRNTLC*NQRFAF Trigger: GAAAGCAAAGCGCTGATTCCAGCACAGAGTGTTTCT...TTGTGCATAATGATAGAAACAGATTCTGATAATACAAGGGGAGGGTCTAGGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGTAGTATCTTTCCAGTTAAACTATTCTTGGCACAAGACTTTCCTCTTAATGTGCTCTGGTTCATGTaGTACATTTCTAACTGGTCG | + |
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Preference number: 2 (lower is better) Translates to: PGSIFPVKLFLAQDFPLNVLWFM*YISNWS Trigger: CGACCAGTTAGAAATGTATCACATGAACCAGAGCAC...ATTAAGAGGAAAGTCTTGTGCCAAGAATAGTTTAACTGGAAAGATACTACCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR-3UTR GCA 90 bp | CATTTACTCAACACCTCTGCTTCTGTTAATTCATTTGAAAACCTGGGGGTAGTATTTGCCTCATACCTGTaGTCTGGTTCATGTGATACA | + |
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Preference number: 2 (lower is better) Translates to: HLLNTSASVNSFENLGVVFASYL*SGSCDT Trigger: TGTATCACATGAACCAGAGCACAGGTATGAGGCAAA...TACTACCCCCAGGTTTTCAAATGAATTAACAGAAGCAGAGGTGTTGAGTAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR-3UTR CCA 90 bp | GTACTCTGTGCCAAGTTCACAGAATTCAGACCCTCGTTGAGAAAGTACTTGTTTCATGTTTCTCAAATATaGATTCCTTGTGGACCACAT | + |
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Preference number: 2 (lower is better) Translates to: VLCAKFTEFRPSLRKYLFHVSQI*IPCGPH Trigger: ATGTGGTCCACAAGGAATCCATATTTGAGAAACATG...AAACAAGTACTTTCTCAACGAGGGTCTGAATTCTGTGAACTTGGCACAGAGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR-3UTR CCA 90 bp | GTACTCTGTGCCAAGTTCACAGAATTCAGACCCTCGTTGAGAAAGTACTTGTTTACATCATTCCATTGCTaGATTGTTCTTCCTCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: VLCAKFTEFRPSLRKYLFTSFHC*IVLPQK Trigger: TTTCTGAGGAAGAACAATCCAGCAATGGAATGATGT...AAACAAGTACTTTCTCAACGAGGGTCTGAATTCTGTGAACTTGGCACAGAGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGTATACAGGCTGAACAGACTGGCAAAAGGCTTTATTATAATCACTATTTTCACTTATAGGGTTTTCTaGCCCCAAAGTCTTTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: RVYRLNRLAKGFIIITIFTYRVF*PQSLCQ Trigger: TTGGCAAAGACTTTGGGGGCAGAAAACCCTATAAGT...GAAAATAGTGATTATAATAAAGCCTTTTGCCAGTCTGTTCAGCCTGTATACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR-3UTR GCA 90 bp | CATTTACTCAACACCTCTGCTTCTGTTAATTCATTTGAAAACCTGGGGGTAGTACTAACATCATTCCATTaGTGGATTGTTCTTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: HLLNTSASVNSFENLGVVLTSFH*WIVLPQ Trigger: CTGAGGAAGAACAATCCAGCAATGGAATGATGTTAG...TACTACCCCCAGGTTTTCAAATGAATTAACAGAAGCAGAGGTGTTGAGTAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR-3UTR CCA 90 bp | AGACTGGTGTGCCAATGGATACTAGTTTCCAACAGTCAAAGAACAAACACTCTTAGTGAGAAAACACAGTaGTTAAAAACACCAACTCTG | + |
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Preference number: 2 (lower is better) Translates to: RLVCQWILVSNSQRTNTLSEKTQ*LKTPTL Trigger: CAGAGTTGGTGTTTTTAACCACTGTGTTTTCTCACT...AAGAGTGTTTGTTCTTTGACTGTTGGAAACTAGTATCCATTGGCACACCAGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| 3UTR-3UTR TCA 90 bp | AGGGTATACAGGCTGAACAGACTGGCAAAAGGCTTTATTATAATCACTATTTTCAATTCAGACCCTCGTTaGGAAAGTACTTGTTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: RVYRLNRLAKGFIIITIFNSDPR*ESTCFC Trigger: GCAAAAACAAGTACTTTCTCAACGAGGGTCTGAATT...GAAAATAGTGATTATAATAAAGCCTTTTGCCAGTCTGTTCAGCCTGTATACCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTACTCAACACCTCTGCTTCTGTTAATTCATTTGAAAACCTGGGGGTAGTATGGTTTCCTCCAATTTaGAGTTTGGGGTATTCAATA | + |
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Preference number: 2 (lower is better) Translates to: HLLNTSASVNSFENLGVVWFPPI*SLGYSI Trigger: TATTGAATACCCCAAACTTCAAATTGGAGGAAACCA...TACTACCCCCAGGTTTTCAAATGAATTAACAGAAGCAGAGGTGTTGAGTAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR-3UTR GCA 90 bp | TATTCACCTAATCATGTTTCTCAAATATGGATTCCTTGTGGACCACATAAGAAGACTTATAGGGTTTTCTaGCCCCAAAGTCTTTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: YSPNHVSQIWIPCGPHKKTYRVF*PQSLCQ Trigger: TTGGCAAAGACTTTGGGGGCAGAAAACCCTATAAGT...CTTCTTATGTGGTCCACAAGGAATCCATATTTGAGAAACATGATTAGGTGAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098822.10 ENSMUST00000151933.2 |
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| 3UTR-3UTR TCA 90 bp | TATTCACCTAATCATGTTTCTCAAATATGGATTCCTTGTGGACCACATAAGAAGTGCATACATTATGGCTaGATTACAGCTCCAACTTTC | + |
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Preference number: 2 (lower is better) Translates to: YSPNHVSQIWIPCGPHKKCIHYG*ITAPTF Trigger: GAAAGTTGGAGCTGTAATTCAGCCATAATGTATGCA...CTTCTTATGTGGTCCACAAGGAATCCATATTTGAGAAACATGATTAGGTGAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGTAGTATCTTTCCAGTTAAACTATTCTTGGCACAAGACTTTCCTCTTAATAAAAGTCACTGGTTCCTaGATTCAGGAATCGCTAATT | + |
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Preference number: 2 (lower is better) Translates to: QVVSFQLNYSWHKTFLLIKVTGS*IQESLI Trigger: AATTAGCGATTCCTGAATGCAGGAACCAGTGACTTT...TATTAAGAGGAAAGTCTTGTGCCAAGAATAGTTTAACTGGAAAGATACTACCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| 3UTR-3UTR GCA 90 bp | CATTTACTCAACACCTCTGCTTCTGTTAATTCATTTGAAAACCTGGGGGTAGTAGAAAGTACTTGTTTTTaGATAAAGACCATTTGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: HLLNTSASVNSFENLGVVESTCF*IKTICL Trigger: GAGGCAAATGGTCTTTATGCAAAAACAAGTACTTTC...TACTACCCCCAGGTTTTCAAATGAATTAACAGAAGCAGAGGTGTTGAGTAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
||
| 3UTR-3UTR CCA 90 bp | GTACCTAGACCCTCCCCTTGTATTATCAGAATCTGTTTCTATCATTATGCACAACAGTTAAACTATTCTTaGCACAAGACTTTCCTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: VPRPSPCIIRICFYHYAQQLNYS*HKTFLL Trigger: TAAGAGGAAAGTCTTGTGCCAAGAATAGTTTAACTG...TTGTGCATAATGATAGAAACAGATTCTGATAATACAAGGGGAGGGTCTAGGTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098822.10 ENSMUST00000151933.2 |
||
| 3UTR-3UTR CCA 90 bp | TATTCACCTAATCATGTTTCTCAAATATGGATTCCTTGTGGACCACATAAGAAGATCTTTGAAAGTCACTaGTTCCTGCATTCAGGAATC | + |
|
Preference number: 2 (lower is better) Translates to: YSPNHVSQIWIPCGPHKKIFESH*FLHSGI Trigger: GATTCCTGAATGCAGGAACCAGTGACTTTCAAAGAT...CTTCTTATGTGGTCCACAAGGAATCCATATTTGAGAAACATGATTAGGTGAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
||
| 3UTR-3UTR CCA 90 bp | TATTCACCTAATCATGTTTCTCAAATATGGATTCCTTGTGGACCACATAAGAAGCAGTTAAACTATTCTTaGCACAAGACTTTCCTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: YSPNHVSQIWIPCGPHKKQLNYS*HKTFLL Trigger: TAAGAGGAAAGTCTTGTGCCAAGAATAGTTTAACTG...CTTCTTATGTGGTCCACAAGGAATCCATATTTGAGAAACATGATTAGGTGAATA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098822.10 ENSMUST00000151933.2 |
||
| 3UTR TCA 72 bp | CTCCCAGAGCCCTGCTGGACTCCCCGTGGATCTTGCTaGTCTTACTCTATCTACTTCCAGCTTCCAGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPEPCWTPRGSC*SYSIYFQLPDP Trigger: AGGGTCTGGAAGCTGGAAGTAGATAGAGTAAGATCAGCAAGATCCACGGGGAGTCCAGCAGGGCTCTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTCTCCCCTGCACACACCTTTCCAGACAAATTCTGGATCATGGTGCCTCGTTCTGAGGTTTGTAGGTaGGCAACAGGAGTGCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SLSPAHTFPDKFWIMVPRSEVCR*ATGVQA Trigger: GGCCTGCACTCCTGTTGCCAACCTACAAACCTCAGA...ACGAGGCACCATGATCCAGAATTTGTCTGGAAAGGTGTGTGCAGGGGAGAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR CCA 72 bp | TGCCTCGTGAAGCCAACAATTCTGAGGTTTGTAGGTTaGCAACAGGAGTGCAGGCCCACCTGGGTTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CLVKPTILRFVG*QQECRPTWVLP Trigger: AGGAAGAACCCAGGTGGGCCTGCACTCCTGTTGCCAACCTACAAACCTCAGAATTGTTGGCTTCACGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR TCA 72 bp | GCAGACTATGTCTCATCTCTCAAGGCATCGGTGGACTaGGCTGTAGCAGAGTTTAGGGCTTCCCTCCACATC | + |
|
Preference number: 3 (lower is better) Translates to: ADYVSSLKASVD*AVAEFRASLHI Trigger: GATGTGGAGGGAAGCCCTAAACTCTGCTACAGCTCAGTCCACCGATGCCTTGAGAGATGAGACATAGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTCTCCCCTGCACACACCTTTCCAGACAAATTCTGGATCATGGTGCCTCGTCACATCTCAGGCTTCTaGTGTCAGAGCATGACTAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLSPAHTFPDKFWIMVPRHISGF*CQSMTR Trigger: TCTAGTCATGCTCTGACACAAGAAGCCTGAGATGTG...ACGAGGCACCATGATCCAGAATTTGTCTGGAAAGGTGTGTGCAGGGGAGAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR GCA 72 bp | AGTTTCCAACAGTCAAAGAACAAACACTCTTGCCTCTaGTTTGTCAGGGGCACGTCTGAACCCCCGTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SFQQSKNKHSCL*FVRGTSEPPWE Trigger: TTCCCACGGGGGTTCAGACGTGCCCCTGACAAAGCAGAGGCAAGAGTGTTTGTTCTTTGACTGTTGGAAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
||
| 3UTR CCA 72 bp | AGCCTCTCCCCTGCACACACCTTTCCAGACAAATTCTaGATCATGGTGCCTCGTGAAGCCAACAATTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLSPAHTFPDKF*IMVPREANNSE Trigger: CTCAGAATTGTTGGCTTCACGAGGCACCATGATCCAGAATTTGTCTGGAAAGGTGTGTGCAGGGGAGAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR TCA 72 bp | TATTGTGACAGCAGTGAGCCTTGGCCACTCAAGTTCTaGAGCCAGATAACCATCACCCTGTATCCCTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: YCDSSEPWPLKF*SQITITLYPSI Trigger: GATGGAGGGATACAGGGTGATGGTTATCTGGCTTCAGAACTTGAGTGGCCAAGGCTCACTGCTGTCACAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR GCA 72 bp | GATACTAGTTTCCAACAGTCAAAGAACAAACACTCTTaGCTCTGCTTTGTCAGGGGCACGTCTGAACCCCCG | + |
|
Preference number: 3 (lower is better) Translates to: DTSFQQSKNKHS*LCFVRGTSEPP Trigger: CGGGGGTTCAGACGTGCCCCTGACAAAGCAGAGGCAAGAGTGTTTGTTCTTTGACTGTTGGAAACTAGTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
||
| 3UTR TCA 72 bp | GGATCTGATGAAGAACCTAGATGTGAGGGAGAACAGTaGCAGTATTCCCATACCAACACTCCTGTCCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GSDEEPRCEGEQ*QYSHTNTPVLC Trigger: GCACAGGACAGGAGTGTTGGTATGGGAATACTGTCACTGTTCTCCCTCACATCTAGGTTCTTCATCAGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR CCA 72 bp | CCCCTGCACACACCTTTCCAGACAAATTCTGGATCATaGTGCCTCGTGAAGCCAACAATTCTGAGGTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PLHTPFQTNSGS*CLVKPTILRFV Trigger: TACAAACCTCAGAATTGTTGGCTTCACGAGGCACCATGATCCAGAATTTGTCTGGAAAGGTGTGTGCAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAACAGTCAAAGAACAAACACTCTTGCCTCTGCTTTGTCAGGGGCACGTCTCTAAAGAGGTTAACCTaGATCAACAGTGAATGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: FQQSKNKHSCLCFVRGTSLKRLT*INSECP Trigger: GGGGCATTCACTGTTGATCAAGGTTAACCTCTTTAG...AGACGTGCCCCTGACAAAGCAGAGGCAAGAGTGTTTGTTCTTTGACTGTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
||
| 3UTR TCA 72 bp | GGCAGGGTGACAGCAAAGCTCTGTATCATAGAAAACTaGCTGGATTCCCATACCTGCATTCAGGAATCGCTA | + |
|
Preference number: 3 (lower is better) Translates to: GRVTAKLCIIEN*LDSHTCIQESL Trigger: TAGCGATTCCTGAATGCAGGTATGGGAATCCAGTCAGTTTTCTATGATACAGAGCTTTGCTGTCACCCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR GCA 72 bp | CTGCACACACCTTTCCAGACAAATTCTGGATCATGGTaGCTCGTGAAGCCAACAATTCTGAGGTTTGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LHTPFQTNSGSW*LVKPTILRFVG Trigger: ACCTACAAACCTCAGAATTGTTGGCTTCACGAGGCACCATGATCCAGAATTTGTCTGGAAAGGTGTGTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTTACTCAACACCTCTGCTTCTGTTAATTCATTTGAAAACCTGGGGGTAGTACTGTCCCCATTCTTCTaGGGTAAAGGCCACAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: HLLNTSASVNSFENLGVVLSPFF*GKGHSH Trigger: GTGGCTGTGGCCTTTACCCAAGAAGAATGGGGACAG...TACTACCCCCAGGTTTTCAAATGAATTAACAGAAGCAGAGGTGTTGAGTAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
||
| 3UTR GCA 72 bp | GTCCTGAGTCTTTCCTCCCATCAAGCAATCACTTCATaGAGAGAAGAGGCTAATAATGAACTCAGAGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: VLSLSSHQAITS*REEANNELRGY Trigger: GTACCCTCTGAGTTCATTATTAGCCTCTTCTCTGCATGAAGTGATTGCTTGATGGGAGGAAAGACTCAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
||
| 3UTR-3UTR CAA 90 bp | ATTAAATGCCTAGACCAGGCAAATCCACAGAGTTGGAAATTGACGAGTGGTTTCACCTATGCTGACTCCTaGACCTCTTGCTGCTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: IKCLDQANPQSWKLTSGFTYADS*TSCCCK Trigger: TTTACAGCAGCAAGAGGTCAAGGAGTCAGCATAGGT...GAAACCACTCGTCAATTTCCAACTCTGTGGATTTGCCTGGTCTAGGCATTTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCTGATGGTTTTGTCACAGGATGTGGAAATGATGTTCATATTGTGACAGCACCACAGAGTTGGAAATaGACGAGTGGTTTCCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TADGFVTGCGNDVHIVTAPQSWK*TSGFQG Trigger: TCCCTGGAAACCACTCGTCAATTTCCAACTCTGTGG...TGCTGTCACAATATGAACATCATTTCCACATCCTGTGACAAAACCATCAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR CCA 72 bp | TCTGTAACCCTTAAACCCAGGACCCATAAAACACAGTaGTTTCCATGTCCTTCTCAGAGCTGTTCATATTCC | + |
|
Preference number: 3 (lower is better) Translates to: SVTLKPRTHKTQ*FPCPSQSCSYS Trigger: GGAATATGAACAGCTCTGAGAAGGACATGGAAACCACTGTGTTTTATGGGTCCTGGGTTTAAGGGTTACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
||
| 3UTR GCA 72 bp | GGCTTAGCATTTAAACACACTTGCTATTCTATCATGTaGACCGATGTTCTGATCCTAGGACTCATGTTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GLAFKHTCYSIM*TDVLILGLMLG Trigger: GCCTAACATGAGTCCTAGGATCAGAACATCGGTGCACATGATAGAATAGCAAGTGTGTTTAAATGCTAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGTAGTATCTTTCCAGTTAAACTATTCTTGGCACAAGACTTTCCTCTTAATGCTGGAATCAGCGCTTaGCTTTCAGTATTCCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: PGSIFPVKLFLAQDFPLNAGISA*LSVFLI Trigger: GATGAGGAATACTGAAAGCAAAGCGCTGATTCCAGC...ATTAAGAGGAAAGTCTTGTGCCAAGAATAGTTTAACTGGAAAGATACTACCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTTACTCAACACCTCTGCTTCTGTTAATTCATTTGAAAACCTGGGGGTAGTATTGCATAAAGACCATTaGCCTCATACCTGTGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HLLNTSASVNSFENLGVVLHKDH*PHTCAL Trigger: CAGAGCACAGGTATGAGGCAAATGGTCTTTATGCAA...TACTACCCCCAGGTTTTCAAATGAATTAACAGAAGCAGAGGTGTTGAGTAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGTAGTATCTTTCCAGTTAAACTATTCTTGGCACAAGACTTTCCTCTTAATCTGCCCCCAAAGTCTTaGCCAATTCAGTTACAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PGSIFPVKLFLAQDFPLNLPPKS*PIQLQF Trigger: AAACTGTAACTGAATTGGCAAAGACTTTGGGGGCAG...ATTAAGAGGAAAGTCTTGTGCCAAGAATAGTTTAACTGGAAAGATACTACCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
||
| 3UTR GCA 72 bp | AGAGTCAGCAGTGAACATAGTGTCTTAACACTAGTATaGTACCAATTTTTACCACAGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RVSSEHSVLTLV*YQFLPQCVCVC Trigger: ACACACACACACACACTGTGGTAAAAATTGGTAGCATACTAGTGTTAAGACACTATGTTCACTGCTGACTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
||
| 3UTR GCA 72 bp | AAACTGACACATGGAGGCTTAGCATTTAAACACACTTaGTATTCTATCATGTGCACCGATGTTCTGATCCTA | + |
|
Preference number: 3 (lower is better) Translates to: KLTHGGLAFKHT*YSIMCTDVLIL Trigger: TAGGATCAGAACATCGGTGCACATGATAGAATAGCAAGTGTGTTTAAATGCTAAGCCTCCATGTGTCAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR CCA 72 bp | TCTATCTATAAAGGACCCAATACCTTCTCATCTCTTTaGGTACCTGGGTATACACACACACTCAGAAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: SIYKGPNTFSSL*VPGYTHTLRKF Trigger: GAATTTTCTGAGTGTGTGTGTATACCCAGGTACCCAAAGAGATGAGAAGGTATTGGGTCCTTTATAGATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR TCA 72 bp | CTGATACGTACCAAACGGACACTGACACTACATTATTaGGTACTGGTTTCTGTTTCAAAACTCAGTCTCATA | + |
|
Preference number: 3 (lower is better) Translates to: LIRTKRTLTLHY*VLVSVSKLSLI Trigger: TATGAGACTGAGTTTTGAAACAGAAACCAGTACTCAATAATGTAGTGTCAGTGTCCGTTTGGTACGTATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098822.10 ENSMUST00000151933.2 |
||
| 3UTR CCA 72 bp | TATCCCATATGTATCTTTCTAACATCATTCCATTGCTaGATTGTTCTTCCTCAGAAACACTCTGTGCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: YPICIFLTSFHC*IVLPQKHSVLE Trigger: TTCCAGCACAGAGTGTTTCTGAGGAAGAACAATCCAGCAATGGAATGATGTTAGAAAGATACATATGGGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTATACAGGCTGAACAGACTGGCAAAAGGCTTTATTATAATCACTATTTTCCCAGTTAAACTATTCTaGGCACAAGACTTTCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RVYRLNRLAKGFIIITIFPVKLF*AQDFPL Trigger: AAGAGGAAAGTCTTGTGCCAAGAATAGTTTAACTGG...GAAAATAGTGATTATAATAAAGCCTTTTGCCAGTCTGTTCAGCCTGTATACCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
||
| 3UTR-3UTR CAA 90 bp | TATTCACCTAATCATGTTTCTCAAATATGGATTCCTTGTGGACCACATAAGAAGCCAGTTAAACTATTCTaGGCACAAGACTTTCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: YSPNHVSQIWIPCGPHKKPVKLF*AQDFPL Trigger: AAGAGGAAAGTCTTGTGCCAAGAATAGTTTAACTGG...CTTCTTATGTGGTCCACAAGGAATCCATATTTGAGAAACATGATTAGGTGAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098822.10 ENSMUST00000151933.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGTAGTATCTTTCCAGTTAAACTATTCTTGGCACAAGACTTTCCTCTTAATGCTCTGGTTAAAGATTaGATGGTATTCCTTATATCC | + |
|
Preference number: 3 (lower is better) Translates to: PGSIFPVKLFLAQDFPLNALVKD*MVFLIS Trigger: GGATATAAGGAATACCATCAAATCTTTAACCAGAGC...ATTAAGAGGAAAGTCTTGTGCCAAGAATAGTTTAACTGGAAAGATACTACCTGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
||
| 3UTR-3UTR CAA 90 bp | TATTCACCTAATCATGTTTCTCAAATATGGATTCCTTGTGGACCACATAAGAAGACAGCATCAGTACATTaGAACAGATTATCTCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: YSPNHVSQIWIPCGPHKKTASVH*NRLSPV Trigger: AACTGGAGATAATCTGTTCAAATGTACTGATGCTGT...CTTCTTATGTGGTCCACAAGGAATCCATATTTGAGAAACATGATTAGGTGAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
||
| 3UTR CCA 72 bp | TATCTTAAAACTGAACTCCCTACTAGATGTGTCTCTTaGATACATTTACTCAACACCTCTGCTTCTGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: YLKTELPTRCVS*IHLLNTSASVN Trigger: ATTAACAGAAGCAGAGGTGTTGAGTAAATGTATCCAAGAGACACATCTAGTAGGGAGTTCAGTTTTAAGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098822.10 ENSMUST00000151933.2 |
||
| CDS-3UTR TCA 90 bp | ATACCCGTGGAGCTTCAGGCAGGCCAGACAGCTGCTTACCAGGATGTGCCCACCCCCAAGACTGGTCCATaGGGGTACCCCAGGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IPVELQAGQTAAYQDVPTPKTGP*GYPRRA Trigger: GGCCCTCCTGGGGTACCCTCATGGACCAGTCTTGGG...GGTGGGCACATCCTGGTAAGCAGCTGTCTGGCCTGCCTGAAGCTCCACGGGTAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| CDS-3UTR TCA 90 bp | CTTACACTTGCTCAAGTTCGCACTGCCCGGGTGTCTGTAACCCTTAAACCCAGGCCCAAGACTGGTCCATaGGGGTACCCCAGGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTLAQVRTARVSVTLKPRPKTGP*GYPRRA Trigger: GGCCCTCCTGGGGTACCCTCATGGACCAGTCTTGGG...CCTGGGTTTAAGGGTTACAGACACCCGGGCAGTGCGAACTTGAGCAAGTGTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
||
| CDS-3UTR TCA 90 bp | ATACCCGTGGAGCTTCAGGCAGGCCAGACAGCTGCTTACCAGGATGTGCCCACCAACCCGGGAACACAGTaGCCTTTCAAGGAAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPVELQAGQTAAYQDVPTNPGTQ*PFKEKQ Trigger: CTGCTTTTCCTTGAAAGGTCACTGTGTTCCCGGGTT...GGTGGGCACATCCTGGTAAGCAGCTGTCTGGCCTGCCTGAAGCTCCACGGGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR CAA 72 bp | GTGCCTCGTGAAGCCAACAATTCTGAGGTTTGTAGGTaGGCAACAGGAGTGCAGGCCCACCTGGGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPREANNSEVCR*ATGVQAHLGSS Trigger: GGAAGAACCCAGGTGGGCCTGCACTCCTGTTGCCAACCTACAAACCTCAGAATTGTTGGCTTCACGAGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| CDS-3UTR GCA 90 bp | AGCCTCTCCCCTGCACACACCTTTCCAGACAAATTCTGGATCATGGTGCCTCGTTCCCTCCATGTGCCATaGTGGATCCTGAGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSPAHTFPDKFWIMVPRSLHVP*WILRTQ Trigger: CTGTGTCCTCAGGATCCAGCATGGCACATGGAGGGA...ACGAGGCACCATGATCCAGAATTTGTCTGGAAAGGTGTGTGCAGGGGAGAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| 3UTR CAA 72 bp | TACACTCCCAGAGCCCTGCTGGACTCCCCGTGGATCTaGCTGATCTTACTCTATCTACTTCCAGCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YTPRALLDSPWI*LILLYLLPASR Trigger: TCTGGAAGCTGGAAGTAGATAGAGTAAGATCAGCAAGATCCACGGGGAGTCCAGCAGGGCTCTGGGAGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| CDS-3UTR TCA 90 bp | GTACTCTGTGCCAAGTTCACAGAATTCAGACCCTCGTTGAGAAAGTACTTGTTTCCCAAGACTGGTCCATaGGGGTACCCCAGGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLCAKFTEFRPSLRKYLFPKTGP*GYPRRA Trigger: GGCCCTCCTGGGGTACCCTCATGGACCAGTCTTGGG...AAACAAGTACTTTCTCAACGAGGGTCTGAATTCTGTGAACTTGGCACAGAGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
||
| 3UTR CAA 72 bp | GCAGAGTTTAGGGCTTCCCTCCACATCTCAGGCTTCTaGTGTCAGAGCATGACTAGACCCAGGCTAACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AEFRASLHISGF*CQSMTRPRLTV Trigger: TACAGTTAGCCTGGGTCTAGTCATGCTCTGACACAAGAAGCCTGAGATGTGGAGGGAAGCCCTAAACTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| CDS-3UTR TCA 90 bp | CTTACACTTGCTCAAGTTCGCACTGCCCGGGTGTCTGTAACCCTTAAACCCAGGGGGGTATTCAATAAGTaGTGGGCTCTGGTTAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTLAQVRTARVSVTLKPRGVFNK*WALVKD Trigger: ATCTTTAACCAGAGCCCATCACTTATTGAATACCCC...CCTGGGTTTAAGGGTTACAGACACCCGGGCAGTGCGAACTTGAGCAAGTGTAAG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGATGGTTTTGTCACAGGATGTGGAAATGATGTTCATATTGTGACAGCAGCCATCCCCCAAGACTaGTCCATGAGGGTACCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TADGFVTGCGNDVHIVTAAIPQD*SMRVPQ Trigger: CTGGGGTACCCTCATGGACCAGTCTTGGGGGATGGC...TGCTGTCACAATATGAACATCATTTCCACATCCTGTGACAAAACCATCAGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGAGAAGAGGCTAATAATGAACTCAGAGGGTACCTTGAAGACTGGTGTGCCGTGTGTGTCCGTTCATaGTTAGTAAGGGCTGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: CREEANNELRGYLEDWCAVCVRS*LVRAER Trigger: TCGTTCAGCCCTTACTAAGCATGAACGGACACACAC...GGCACACCAGTCTTCAAGGTACCCTCTGAGTTCATTATTAGCCTCTTCTCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
||
| CDS-3UTR CCA 90 bp | GTACCTAGACCCTCCCCTTGTATTATCAGAATCTGTTTCTATCATTATGCACAAGCCATCCCCCAAGACTaGTCCATGAGGGTACCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VPRPSPCIIRICFYHYAQAIPQD*SMRVPQ Trigger: CTGGGGTACCCTCATGGACCAGTCTTGGGGGATGGC...TTGTGCATAATGATAGAAACAGATTCTGATAATACAAGGGGAGGGTCTAGGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098822.10 ENSMUST00000151933.2 |
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| CDS-3UTR CCA 90 bp | ACTGCTGATGGTTTTGTCACAGGATGTGGAAATGATGTTCATATTGTGACAGCACATCTCACCTCGACTTaGGCTACTGGGAGCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: TADGFVTGCGNDVHIVTAHLTST*ATGSPP Trigger: AGGTGGGCTCCCAGTAGCCCAAGTCGAGGTGAGATG...TGCTGTCACAATATGAACATCATTTCCACATCCTGTGACAAAACCATCAGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| CDS-3UTR TCA 90 bp | CTTACACTTGCTCAAGTTCGCACTGCCCGGGTGTCTGTAACCCTTAAACCCAGGTGGTTTCCTCCAATTTaGAGTTTGGGGTATTCAATA | + |
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Preference number: 4 (lower is better) Translates to: LTLAQVRTARVSVTLKPRWFPPI*SLGYSI Trigger: TATTGAATACCCCAAACTTCAAATTGGAGGAAACCA...CCTGGGTTTAAGGGTTACAGACACCCGGGCAGTGCGAACTTGAGCAAGTGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR CCA 90 bp | CTTACACTTGCTCAAGTTCGCACTGCCCGGGTGTCTGTAACCCTTAAACCCAGGACATCATTCCATTGCTaGATTGTTCTTCCTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LTLAQVRTARVSVTLKPRTSFHC*IVLPQK Trigger: TTTCTGAGGAAGAACAATCCAGCAATGGAATGATGT...CCTGGGTTTAAGGGTTACAGACACCCGGGCAGTGCGAACTTGAGCAAGTGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| 3UTR CAA 72 bp | TCTTCCTCAGAAACACTCTGTGCTGGAATCAGCGCTTaGCTTTCAGTATTCCTCATCCACTCTGGACAACTG | + |
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Preference number: 4 (lower is better) Translates to: SSSETLCAGISA*LSVFLIHSGQL Trigger: CAGTTGTCCAGAGTGGATGAGGAATACTGAAAGCAAAGCGCTGATTCCAGCACAGAGTGTTTCTGAGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| CDS-3UTR GCA 90 bp | TGCAGAGAAGAGGCTAATAATGAACTCAGAGGGTACCTTGAAGACTGGTGTGCCTCCAGTTTGCATTTTTaGAGGGTATACAGGCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: CREEANNELRGYLEDWCASSLHF*RVYRLN Trigger: GTTCAGCCTGTATACCCTGCAAAAATGCAAACTGGA...GGCACACCAGTCTTCAAGGTACCCTCTGAGTTCATTATTAGCCTCTTCTCTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR GCA 90 bp | CTTACACTTGCTCAAGTTCGCACTGCCCGGGTGTCTGTAACCCTTAAACCCAGGAGATTATCTCCAGTTTaGATTTTTGCAGGGTATACA | + |
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Preference number: 4 (lower is better) Translates to: LTLAQVRTARVSVTLKPRRLSPV*IFAGYT Trigger: TGTATACCCTGCAAAAATGCAAACTGGAGATAATCT...CCTGGGTTTAAGGGTTACAGACACCCGGGCAGTGCGAACTTGAGCAAGTGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR CCA 90 bp | TATTCACCTAATCATGTTTCTCAAATATGGATTCCTTGTGGACCACATAAGAAGGCCATCCCCCAAGACTaGTCCATGAGGGTACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: YSPNHVSQIWIPCGPHKKAIPQD*SMRVPQ Trigger: CTGGGGTACCCTCATGGACCAGTCTTGGGGGATGGC...CTTCTTATGTGGTCCACAAGGAATCCATATTTGAGAAACATGATTAGGTGAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098822.10 ENSMUST00000151933.2 |
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| 3UTR CAA 72 bp | AGACAGCTGCTTACCAGGATGTGCCCACCTGATGCATaGCTTTTACCTCTTTGCTTATTAGTCAAGGTAACG | + |
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Preference number: 4 (lower is better) Translates to: RQLLTRMCPPDA*LLPLCLLVKVT Trigger: CGTTACCTTGACTAATAAGCAAAGAGGTAAAAGCAATGCATCAGGTGGGCACATCCTGGTAAGCAGCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| 3UTR CAA 72 bp | AAATGCCTAGACCAGGCAAATCCACAGAGTTGGAAATaGACGAGTGGTTTCCAGGGACTGGAAATAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: KCLDQANPQSWK*TSGFQGLEIGR Trigger: TCTTCCTATTTCCAGTCCCTGGAAACCACTCGTCAATTTCCAACTCTGTGGATTTGCCTGGTCTAGGCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| CDS-3UTR TCA 90 bp | TGCAGAGAAGAGGCTAATAATGAACTCAGAGGGTACCTTGAAGACTGGTGTGCCTGCATACATTATGGCTaGATTACAGCTCCAACTTTC | + |
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Preference number: 4 (lower is better) Translates to: CREEANNELRGYLEDWCACIHYG*ITAPTF Trigger: GAAAGTTGGAGCTGTAATTCAGCCATAATGTATGCA...GGCACACCAGTCTTCAAGGTACCCTCTGAGTTCATTATTAGCCTCTTCTCTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR GCA 90 bp | CCAGGTAGTATCTTTCCAGTTAAACTATTCTTGGCACAAGACTTTCCTCTTAATTCCCTCCATGTGCCATaGTGGATCCTGAGGACACAG | + |
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Preference number: 4 (lower is better) Translates to: PGSIFPVKLFLAQDFPLNSLHVP*WILRTQ Trigger: CTGTGTCCTCAGGATCCAGCATGGCACATGGAGGGA...ATTAAGAGGAAAGTCTTGTGCCAAGAATAGTTTAACTGGAAAGATACTACCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098822.10 ENSMUST00000151933.2 |
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| CDS-3UTR GCA 90 bp | GTTTCCAACAGTCAAAGAACAAACACTCTTGCCTCTGCTTTGTCAGGGGCACGTCTAACATCATTCCATTaGTGGATTGTTCTTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VSNSQRTNTLASALSGARLTSFH*WIVLPQ Trigger: CTGAGGAAGAACAATCCAGCAATGGAATGATGTTAG...ACGTGCCCCTGACAAAGCAGAGGCAAGAGTGTTTGTTCTTTGACTGTTGGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR CCA 90 bp | ATGAACTCAGAGGGTACCTTGAAGACTGGTGTGCCAATGGATACTAGTTTCCAAAGAAACACTCTGTGCTaGAATCAGCGCTTTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: MNSEGTLKTGVPMDTSFQRNTLC*NQRFAF Trigger: GAAAGCAAAGCGCTGATTCCAGCACAGAGTGTTTCT...TTGGAAACTAGTATCCATTGGCACACCAGTCTTCAAGGTACCCTCTGAGTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR GCA 90 bp | TATTCACCTAATCATGTTTCTCAAATATGGATTCCTTGTGGACCACATAAGAAGTCCCTCCATGTGCCATaGTGGATCCTGAGGACACAG | + |
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Preference number: 4 (lower is better) Translates to: YSPNHVSQIWIPCGPHKKSLHVP*WILRTQ Trigger: CTGTGTCCTCAGGATCCAGCATGGCACATGGAGGGA...CTTCTTATGTGGTCCACAAGGAATCCATATTTGAGAAACATGATTAGGTGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098822.10 ENSMUST00000151933.2 |
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| CDS-3UTR CCA 90 bp | CCAGGTAGTATCTTTCCAGTTAAACTATTCTTGGCACAAGACTTTCCTCTTAATCCAGAACTCCTAGCCTaGAGAGCCAAGGATTATCCC | + |
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Preference number: 4 (lower is better) Translates to: PGSIFPVKLFLAQDFPLNPELLA*RAKDYP Trigger: GGGATAATCCTTGGCTCTCCAGGCTAGGAGTTCTGG...ATTAAGAGGAAAGTCTTGTGCCAAGAATAGTTTAACTGGAAAGATACTACCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR TCA 90 bp | ATGAACTCAGAGGGTACCTTGAAGACTGGTGTGCCAATGGATACTAGTTTCCAAATGCTTAGTAAGGGCTaGACGATTCCTAAAAACTTT | + |
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Preference number: 4 (lower is better) Translates to: MNSEGTLKTGVPMDTSFQMLSKG*TIPKNF Trigger: AAAGTTTTTAGGAATCGTTCAGCCCTTACTAAGCAT...TTGGAAACTAGTATCCATTGGCACACCAGTCTTCAAGGTACCCTCTGAGTTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR GCA 90 bp | ATGAACTCAGAGGGTACCTTGAAGACTGGTGTGCCAATGGATACTAGTTTCCAATTCTCCTGTATGTACTaGTTTATGATCACCAAATTG | + |
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Preference number: 4 (lower is better) Translates to: MNSEGTLKTGVPMDTSFQFSCMY*FMITKL Trigger: CAATTTGGTGATCATAAAGCAGTACATACAGGAGAA...TTGGAAACTAGTATCCATTGGCACACCAGTCTTCAAGGTACCCTCTGAGTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR TCA 90 bp | TTCCATCTAATATTCCAGGTAGTATCTTTCCAGTTAAACTATTCTTGGCACAAGGTGCTCTGGTTCATGTaGTACATTTCTAACTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: FHLIFQVVSFQLNYSWHKVLWFM*YISNWS Trigger: CGACCAGTTAGAAATGTATCACATGAACCAGAGCAC...CTTGTGCCAAGAATAGTTTAACTGGAAAGATACTACCTGGAATATTAGATGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| 3UTR CAA 72 bp | TCGTTGAGAAAGTACTTGTTTTTGCATAAAGACCATTaGCCTCATACCTGTGCTCTGGTTCATGTGATACAT | + |
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Preference number: 4 (lower is better) Translates to: SLRKYLFLHKDH*PHTCALVHVIH Trigger: ATGTATCACATGAACCAGAGCACAGGTATGAGGCAAATGGTCTTTATGCAAAAACAAGTACTTTCTCAACGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| CDS-3UTR TCA 90 bp | CCAGGTAGTATCTTTCCAGTTAAACTATTCTTGGCACAAGACTTTCCTCTTAATAATTCAGACCCTCGTTaGGAAAGTACTTGTTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: PGSIFPVKLFLAQDFPLNNSDPR*ESTCFC Trigger: GCAAAAACAAGTACTTTCTCAACGAGGGTCTGAATT...ATTAAGAGGAAAGTCTTGTGCCAAGAATAGTTTAACTGGAAAGATACTACCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR GCA 90 bp | TATTCACCTAATCATGTTTCTCAAATATGGATTCCTTGTGGACCACATAAGAAGTTTGCCTCATACCTGTaGTCTGGTTCATGTGATACA | + |
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Preference number: 4 (lower is better) Translates to: YSPNHVSQIWIPCGPHKKFASYL*SGSCDT Trigger: TGTATCACATGAACCAGAGCACAGGTATGAGGCAAA...CTTCTTATGTGGTCCACAAGGAATCCATATTTGAGAAACATGATTAGGTGAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR CCA 90 bp | CATTTACTCAACACCTCTGCTTCTGTTAATTCATTTGAAAACCTGGGGGTAGTAATTAAGTTTAAGCTTTaGCTGTACTCTGTGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: HLLNTSASVNSFENLGVVIKFKL*LYSVPS Trigger: ACTTGGCACAGAGTACAGCCAAAGCTTAAACTTAAT...TACTACCCCCAGGTTTTCAAATGAATTAACAGAAGCAGAGGTGTTGAGTAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR GCA 90 bp | GTACCTAGACCCTCCCCTTGTATTATCAGAATCTGTTTCTATCATTATGCACAAGAAAGTACTTGTTTTTaGATAAAGACCATTTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VPRPSPCIIRICFYHYAQESTCF*IKTICL Trigger: GAGGCAAATGGTCTTTATGCAAAAACAAGTACTTTC...TTGTGCATAATGATAGAAACAGATTCTGATAATACAAGGGGAGGGTCTAGGTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR CCA 90 bp | CCAGGTAGTATCTTTCCAGTTAAACTATTCTTGGCACAAGACTTTCCTCTTAATTATCTGCATACATTATaGCTGAATTACAGCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: PGSIFPVKLFLAQDFPLNYLHTL*LNYSSN Trigger: GTTGGAGCTGTAATTCAGCCATAATGTATGCAGATA...ATTAAGAGGAAAGTCTTGTGCCAAGAATAGTTTAACTGGAAAGATACTACCTGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS TCA 90 bp | GGAACAGTATCAACTAGGGTGGTCAGGGAAAACCCGGGAACACAGTaGCCTTTCAAGGAAAAGCAGAAGTTCCATCTCACCTCGACTTGG | + |
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Preference number: 5 (lower is better) Translates to: GTVSTRVVRENPGTQ*PFKEKQKFHLTSTW Trigger: CCAAGTCGAGGTGAGATGGAACTTCTGCTTTTCCTTGAAAGGTCACTGTGTTCCCGGGTTTTCCCTGACCACCCTAGTTGATACTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| CDS-3UTR CAA 90 bp | ACTGCTGATGGTTTTGTCACAGGATGTGGAAATGATGTTCATATTGTGACAGCACCATCTCACCTCGACTaGGGCTACTGGGAGCCCACC | + |
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Preference number: 5 (lower is better) Translates to: TADGFVTGCGNDVHIVTAPSHLD*GYWEPT Trigger: GGTGGGCTCCCAGTAGCCCAAGTCGAGGTGAGATGG...TGCTGTCACAATATGAACATCATTTCCACATCCTGTGACAAAACCATCAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| CDS-3UTR CAA 90 bp | ATGAACTCAGAGGGTACCTTGAAGACTGGTGTGCCAATGGATACTAGTTTCCAACTGTCCCCATTCTTCTaGGGTAAAGGCCACAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: MNSEGTLKTGVPMDTSFQLSPFF*GKGHSH Trigger: GTGGCTGTGGCCTTTACCCAAGAAGAATGGGGACAG...TTGGAAACTAGTATCCATTGGCACACCAGTCTTCAAGGTACCCTCTGAGTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR CAA 90 bp | GTACCTAGACCCTCCCCTTGTATTATCAGAATCTGTTTCTATCATTATGCACAACTCTTGCTGCTCGACTaGGGCTACTGGGAGCCCACC | + |
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Preference number: 5 (lower is better) Translates to: VPRPSPCIIRICFYHYAQLLLLD*GYWEPT Trigger: GGTGGGCTCCCAGTAGCCCAAGTCGAGCAGCAAGAG...TTGTGCATAATGATAGAAACAGATTCTGATAATACAAGGGGAGGGTCTAGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151933.2 |
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| CDS-3UTR CAA 90 bp | TTCCAACAGTCAAAGAACAAACACTCTTGCCTCTGCTTTGTCAGGGGCACGTCTGCTGGAATCAGCGCTTaGCTTTCAGTATTCCTCATC | + |
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Preference number: 5 (lower is better) Translates to: FQQSKNKHSCLCFVRGTSAGISA*LSVFLI Trigger: GATGAGGAATACTGAAAGCAAAGCGCTGATTCCAGC...AGACGTGCCCCTGACAAAGCAGAGGCAAGAGTGTTTGTTCTTTGACTGTTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR CAA 90 bp | CAGGTAGTATCTTTCCAGTTAAACTATTCTTGGCACAAGACTTTCCTCTTAATACACTGGTTCCTCGACTaGGGCTACTGGGAGCCCACC | + |
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Preference number: 5 (lower is better) Translates to: QVVSFQLNYSWHKTFLLIHWFLD*GYWEPT Trigger: GGTGGGCTCCCAGTAGCCCAAGTCGAGGAACCAGTG...TATTAAGAGGAAAGTCTTGTGCCAAGAATAGTTTAACTGGAAAGATACTACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR CAA 90 bp | CTTACACTTGCTCAAGTTCGCACTGCCCGGGTGTCTGTAACCCTTAAACCCAGGACAGCATCAGTACATTaGAACAGATTATCTCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: LTLAQVRTARVSVTLKPRTASVH*NRLSPV Trigger: AACTGGAGATAATCTGTTCAAATGTACTGATGCTGT...CCTGGGTTTAAGGGTTACAGACACCCGGGCAGTGCGAACTTGAGCAAGTGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR CAA 90 bp | TGCAGAGAAGAGGCTAATAATGAACTCAGAGGGTACCTTGAAGACTGGTGTGCCCAGATTATCTCCAGTTaGCATTTTTGCAGGGTATAC | + |
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Preference number: 5 (lower is better) Translates to: CREEANNELRGYLEDWCAQIISS*HFCRVY Trigger: GTATACCCTGCAAAAATGCAAACTGGAGATAATCTG...GGCACACCAGTCTTCAAGGTACCCTCTGAGTTCATTATTAGCCTCTTCTCTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR CAA 90 bp | TATTCACCTAATCATGTTTCTCAAATATGGATTCCTTGTGGACCACATAAGAAGCTCCAGCTAAAAGACTaGCCACATTCAGTGCACTCA | + |
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Preference number: 5 (lower is better) Translates to: YSPNHVSQIWIPCGPHKKLQLKD*PHSVHS Trigger: TGAGTGCACTGAATGTGGCAAGTCTTTTAGCTGGAG...CTTCTTATGTGGTCCACAAGGAATCCATATTTGAGAAACATGATTAGGTGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR CAA 90 bp | TATTCACCTAATCATGTTTCTCAAATATGGATTCCTTGTGGACCACATAAGAAGTTGCATAAAGACCATTaGCCTCATACCTGTGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YSPNHVSQIWIPCGPHKKLHKDH*PHTCAL Trigger: CAGAGCACAGGTATGAGGCAAATGGTCTTTATGCAA...CTTCTTATGTGGTCCACAAGGAATCCATATTTGAGAAACATGATTAGGTGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS-3UTR CAA 90 bp | TTCCATCTAATATTCCAGGTAGTATCTTTCCAGTTAAACTATTCTTGGCACAAGGCTCTGGTTAAAGATTaGATGGTATTCCTTATATCC | + |
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Preference number: 5 (lower is better) Translates to: FHLIFQVVSFQLNYSWHKALVKD*MVFLIS Trigger: GGATATAAGGAATACCATCAAATCTTTAACCAGAGC...CTTGTGCCAAGAATAGTTTAACTGGAAAGATACTACCTGGAATATTAGATGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS CCA 72 bp | GAGACAGAAGGCTCAGGAGCTGCCATCCCCCAAGACTaGTCCATGAGGGTACCCCAGGAGGGCCATGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: ETEGSGAAIPQD*SMRVPQEGHGL Trigger: CAACCCATGGCCCTCCTGGGGTACCCTCATGGACCAGTCTTGGGGGATGGCAGCTCCTGAGCCTTCTGTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098822.10 ENSMUST00000123589.8 ENSMUST00000151933.2 |
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| CDS CCA 72 bp | AAAGCAGAAGTTCCATCTCACCTCGACTTGGGCTACTaGGAGCCCACCTGTCTTTCTTCCGTCCTCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: KAEVPSHLDLGY*EPTCLSSVLLS Trigger: GCTGAGGAGGACGGAAGAAAGACAGGTGGGCTCCCAGTAGCCCAAGTCGAGGTGAGATGGAACTTCTGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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| CDS CCA 72 bp | ATCTTTGAAAGTCACTGGTTCCTCGACTTGGGCTACTaGGAGCCCACCTGTCTTTCTTCCGTCCTCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: IFESHWFLDLGY*EPTCLSSVLLS Trigger: GCTGAGGAGGACGGAAGAAAGACAGGTGGGCTCCCAGTAGCCCAAGTCGAGGAACCAGTGACTTTCAAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098822.10 |
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| CDS TCA 72 bp | TCAACTAGGGTGGTCAGGGAAAACCCGGGAACACAGTaGCCTTTCAAGGAAAAGCAGAAGTTCCATCTCACC | + |
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Preference number: 6 (lower is better) Translates to: STRVVRENPGTQ*PFKEKQKFHLT Trigger: GGTGAGATGGAACTTCTGCTTTTCCTTGAAAGGTCACTGTGTTCCCGGGTTTTCCCTGACCACCCTAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123589.8 |
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