Pregenerated sensors for ZFP605 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023284Ensembl transcript IDs: ENSMUST00000086686.7, ENSMUST00000112528.8, ENSMUST00000147631.8
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGGCGTCAGATCTCATTACGGGTGGTTGTGAGCCACCATATGGTTaGTGGGATTTGAACTCAGAACCTTCAGAAGAGCAGTCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: RASDLITGGCEPPYG*WDLNSEPSEEQSVL Trigger: GAGCACTGACTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCATATGGTGGCTCACAACCACCCGTAATGAGATCTGACGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| 3UTR TCA 90 bp | TCAGACACACCAGAAGAGGGCGTCAGATCTCATTACGGGTGGTTGTaGGCCACCATATGGTTGCTGGGATTTGAACTCAGAACCTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: SDTPEEGVRSHYGWL*ATIWLLGFELRTFR Trigger: TCTGAAGGTTCTGAGTTCAAATCCCAGCAACCATATGGTGGCTCACAACCACCCGTAATGAGATCTGACGCCCTCTTCTGGTGTGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| 3UTR TCA 90 bp | ATCTCATTACGGGTGGTTGTGAGCCACCATATGGTTGCTGGGATTTaGACTCAGAACCTTCAGAAGAGCAGTCAGTGCTCTTACCCACTG | + |
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Preference number: 1 (lower is better) Translates to: ISLRVVVSHHMVAGI*TQNLQKSSQCSYPL Trigger: CAGTGGGTAAGAGCACTGACTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCATATGGTGGCTCACAACCACCCGTAATGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| 3UTR GCA 90 bp | TCTAGAAGTACTGAAACCATTGTTACCATGCTAACTTATCTCACGTaGACTAAGCTGTGTCTTCTGGGAAAACTTATTTTCATATCGTCT | + |
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Preference number: 1 (lower is better) Translates to: SRSTETIVTMLTYLT*TKLCLLGKLIFISS Trigger: AGACGATATGAAAATAAGTTTTCCCAGAAGACACAGCTTAGTGCACGTGAGATAAGTTAGCATGGTAACAATGGTTTCAGTACTTCTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| 3UTR CAA 90 bp | GATCTCATTACGGGTGGTTGTGAGCCACCATATGGTTGCTGGGATTaGAACTCAGAACCTTCAGAAGAGCAGTCAGTGCTCTTACCCACT | + |
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Preference number: 2 (lower is better) Translates to: DLITGGCEPPYGCWD*NSEPSEEQSVLLPT Trigger: AGTGGGTAAGAGCACTGACTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCATATGGTGGCTCACAACCACCCGTAATGAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| 3UTR-3UTR GCA 90 bp | ATACTTAAGTACACTGTAACTGTTTTCAGACACACCAGAAGAGGGCGTCAGATCGAGCCACCATATGGTTaGTGGGATTTGAACTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: ILKYTVTVFRHTRRGRQIEPPYG*WDLNSE Trigger: TTCTGAGTTCAAATCCCAGCAACCATATGGTGGCTC...GATCTGACGCCCTCTTCTGGTGTGTCTGAAAACAGTTACAGTGTACTTAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| 3UTR TCA 72 bp | CGGGTGGTTGTGAGCCACCATATGGTTGCTGGGATTTaGACTCAGAACCTTCAGAAGAGCAGTCAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: RVVVSHHMVAGI*TQNLQKSSQCS Trigger: AGAGCACTGACTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCATATGGTGGCTCACAACCACCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| 3UTR TCA 72 bp | AGAACCTTCAGAAGAGCAGTCAGTGCTCTTACCCACTaGGCCATCTCACCAGCCCTGACAGACAACTTTTTA | + |
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Preference number: 3 (lower is better) Translates to: RTFRRAVSALTH*AISPALTDNFL Trigger: TAAAAAGTTGTCTGTCAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACTGACTGCTCTTCTGAAGGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| 3UTR GCA 72 bp | GATCTCATTACGGGTGGTTGTGAGCCACCATATGGTTaGTGGGATTTGAACTCAGAACCTTCAGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLITGGCEPPYG*WDLNSEPSEEQ Trigger: CTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCATATGGTGGCTCACAACCACCCGTAATGAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| 3UTR TCA 72 bp | GCATTCTTTAGTGGTCGATGGGTTATCCCTTTCAGATaGGGTCTCTGGCTCACTTGCAATCACAGCTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: AFFSGRWVIPFR*GLWLTCNHSFS Trigger: AGAAAAGCTGTGATTGCAAGTGAGCCAGAGACCTCATCTGAAAGGGATAACCCATCGACCACTAAAGAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR GCA 90 bp | TGCTCTTACCCACTGAGCCATCTCACCAGCCCTGACAGACAACTTTTTACAGTAGTAGGGCTAAGCAGCTaGCACTGGTCCCAGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: CSYPLSHLTSPDRQLFTVVGLSS*HWSQEK Trigger: CTTCTCCTGGGACCAGTGGCAGCTGCTTAGCCCTAC...TACTGTAAAAAGTTGTCTGTCAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| 3UTR CAA 72 bp | ACGGGTGGTTGTGAGCCACCATATGGTTGCTGGGATTaGAACTCAGAACCTTCAGAAGAGCAGTCAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TGGCEPPYGCWD*NSEPSEEQSVL Trigger: GAGCACTGACTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCATATGGTGGCTCACAACCACCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR GCA 90 bp | TTTCAGATGAGGTCTCTGGCTCACTTGCAATCACAGCTTTTCTCCTGTCTAATAGAGATGTGGCTTCCATaGGAAGGCTTTCCCGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: FQMRSLAHLQSQLFSCLIEMWLP*EGFPAV Trigger: GACTGCGGGAAAGCCTTCGCATGGAAGCCACATCTC...TATTAGACAGGAGAAAAGCTGTGATTGCAAGTGAGCCAGAGACCTCATCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR TCA 90 bp | CACTTGCAATCACAGCTTTTCTCCTGTCTAATACTTGTAACTTCGACTAGAGGCCCGCCGAAAGCTTTCTaGCGTTCTGGTTCTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HLQSQLFSCLILVTSTRGPPKAF*RSGSSP Trigger: AGGAGAAGAACCAGAACGTCAGAAAGCTTTCGGCGG...GCCTCTAGTCGAAGTTACAAGTATTAGACAGGAGAAAAGCTGTGATTGCAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR TCA 90 bp | TCACAGCTTTTCTCCTGTCTAATACTTGTAACTTCGACTAGAGGCTCTAGCGCTGAAGCGAGTTCCTCCTaGAGGCTTTCTCACATTCAC | + |
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Preference number: 4 (lower is better) Translates to: SQLFSCLILVTSTRGSSAEASSS*RLSHIH Trigger: GTGAATGTGAGAAAGCCTTCAGGAGGAACTCGCTTC...AGCGCTAGAGCCTCTAGTCGAAGTTACAAGTATTAGACAGGAGAAAAGCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR TCA 90 bp | TTAGTGGTCGATGGGTTATCCCTTTCAGATGAGGTCTCTGGCTCACTTGCAATCGGTGTGACTTCTTGTTaGAGATACTACCACACTGAC | + |
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Preference number: 4 (lower is better) Translates to: LVVDGLSLSDEVSGSLAIGVTSC*RYYHTD Trigger: GTCAGTGTGGTAGTATCTTCAACAAGAAGTCACACC...GATTGCAAGTGAGCCAGAGACCTCATCTGAAAGGGATAACCCATCGACCACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR GCA 90 bp | TGCTCTTACCCACTGAGCCATCTCACCAGCCCTGACAGACAACTTTTTACAGTATTTGCGTTGGTTTCCTaGTGTAGGTTTTTCCACGTG | + |
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Preference number: 4 (lower is better) Translates to: CSYPLSHLTSPDRQLFTVFALVS*CRFFHV Trigger: CACGTGGAAAAACCTACAGCAGGAAACCAACGCAAA...TACTGTAAAAAGTTGTCTGTCAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR GCA 90 bp | TGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAGTCAGTGCTCTTACCCACCTTTTGAACAAATaGCTTCCCACACTCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: WLLGFELRTFRRAVSALTHLLNK*LPTLTA Trigger: TGCAGTGAGTGTGGGAAGGCATTTGTTCAAAAGGTG...GGTAAGAGCACTGACTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR TCA 90 bp | TGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAGTCAGTGCTCTTACCGAGTTCATGCTTGAGTaGCATACTTCCTCCAAAACA | + |
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Preference number: 4 (lower is better) Translates to: WLLGFELRTFRRAVSALTEFMLE*HTSSKT Trigger: TGTTTTGGAGGAAGTATGTCACTCAAGCATGAACTC...GGTAAGAGCACTGACTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR GCA 90 bp | CACTTGCAATCACAGCTTTTCTCCTGTCTAATACTTGTAACTTCGACTAGAGGCGTAAGGTTTATGTACTaGGTGACTCATCGCCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: HLQSQLFSCLILVTSTRGVRFMY*VTHRRP Trigger: AGGCCGGCGATGAGTCACGCAGTACATAAACCTTAC...GCCTCTAGTCGAAGTTACAAGTATTAGACAGGAGAAAAGCTGTGATTGCAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR CCA 90 bp | TCACAGCTTTTCTCCTGTCTAATACTTGTAACTTCGACTAGAGGCTCTAGCGCTCGGCCTGTTTTGCGTTaGTTTCCTGCTGTAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: SQLFSCLILVTSTRGSSARPVLR*FPAVGF Trigger: AAAACCTACAGCAGGAAACCAACGCAAAACAGGCCG...AGCGCTAGAGCCTCTAGTCGAAGTTACAAGTATTAGACAGGAGAAAAGCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR TCA 90 bp | GTCTTCTGGGAAAACTTATTTTCATATCGTCTACCTCTACAAACAGCCTCCTTTGTTGTGGTTTTCCGATaGAGGCCTCACCACATTCCC | + |
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Preference number: 4 (lower is better) Translates to: VFWENLFSYRLPLQTASFVVVFR*RPHHIP Trigger: GGGAATGTGGTGAGGCCTTCATCGGAAAACCACAAC...AAAGGAGGCTGTTTGTAGAGGTAGACGATATGAAAATAAGTTTTCCCAGAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR GCA 90 bp | ATACTTAAGTACACTGTAACTGTTTTCAGACACACCAGAAGAGGGCGTCAGATCCCAAGAAGACAAGGCTaGTGCAGTTCTCCAACATCA | + |
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Preference number: 4 (lower is better) Translates to: ILKYTVTVFRHTRRGRQIPRRQG*CSSPTS Trigger: TGATGTTGGAGAACTGCAGCAGCCTTGTCTTCTTGG...GATCTGACGCCCTCTTCTGGTGTGTCTGAAAACAGTTACAGTGTACTTAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR GCA 90 bp | TTCCCAACTCCTAAAGCTGTTTCAGCAGTCATGGTCTTGATAGACTCTTCTGAAGTAGGTTTTTCCACGTaGATAGGGCTTCTGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: FPTPKAVSAVMVLIDSSEVGFST*IGLLSS Trigger: ACTGGACAGAAGCCCTATGCACGTGGAAAAACCTAC...TTCAGAAGAGTCTATCAAGACCATGACTGCTGAAACAGCTTTAGGAGTTGGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR TCA 90 bp | CACTTGCAATCACAGCTTTTCTCCTGTCTAATACTTGTAACTTCGACTAGAGGCCTGTATAAACTCTTTTaGGTAGGGCTAAGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HLQSQLFSCLILVTSTRGLYKLF*VGLSSC Trigger: GCAGCTGCTTAGCCCTACTCAAAAGAGTTTATACAG...GCCTCTAGTCGAAGTTACAAGTATTAGACAGGAGAAAAGCTGTGATTGCAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR TCA 90 bp | CACTTGCAATCACAGCTTTTCTCCTGTCTAATACTTGTAACTTCGACTAGAGGCTTCTGGTTCTTCTCCTaGGTGAGTCTTTTGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: HLQSQLFSCLILVTSTRGFWFFS*VSLLVD Trigger: ATCCACCAAAAGACTCACTCAGGAGAAGAACCAGAA...GCCTCTAGTCGAAGTTACAAGTATTAGACAGGAGAAAAGCTGTGATTGCAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR TCA 90 bp | TTCCCAACTCCTAAAGCTGTTTCAGCAGTCATGGTCTTGATAGACTCTTCTGAAATGAGTTGCACCTTTTaGACAAATGCCTTCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: FPTPKAVSAVMVLIDSSEMSCTF*TNAFPH Trigger: GTGTGGGAAGGCATTTGTTCAAAAGGTGCAACTCAT...TTCAGAAGAGTCTATCAAGACCATGACTGCTGAAACAGCTTTAGGAGTTGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR GCA 90 bp | TTCCCAACTCCTAAAGCTGTTTCAGCAGTCATGGTCTTGATAGACTCTTCTGAACCTGAATGTGTCCTTTaGTTTGTAACGAGCTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: FPTPKAVSAVMVLIDSSEPECVL*FVTSCD Trigger: GTCACAGCTCGTTACAAAGCAAAGGACACATTCAGG...TTCAGAAGAGTCTATCAAGACCATGACTGCTGAAACAGCTTTAGGAGTTGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR CCA 90 bp | CCCTTTCAGATGAGGTCTCTGGCTCACTTGCAATCACAGCTTTTCTCCTGTCTATTACATCAGGTTTGGTaGTTTGATTACCCAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PFQMRSLAHLQSQLFSCLLHQVW*FDYPRR Trigger: TCTTCTTGGGTAATCAAACCACCAAACCTGATGTAA...TAGACAGGAGAAAAGCTGTGATTGCAAGTGAGCCAGAGACCTCATCTGAAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| 3UTR CAA 72 bp | ATGGGTTATCCCTTTCAGATGAGGTCTCTGGCTCACTaGCAATCACAGCTTTTCTCCTGTCTAATACTTGTA | + |
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Preference number: 4 (lower is better) Translates to: MGYPFQMRSLAH*QSQLFSCLILV Trigger: TACAAGTATTAGACAGGAGAAAAGCTGTGATTGCAAGTGAGCCAGAGACCTCATCTGAAAGGGATAACCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR CCA 90 bp | TTTCAGATGAGGTCTCTGGCTCACTTGCAATCACAGCTTTTCTCCTGTCTAATAATGTTTAGCAAGTTGTaGTTTTCCGATGAAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: FQMRSLAHLQSQLFSCLIMFSKL*FSDEGL Trigger: GAGGCCTTCATCGGAAAACCACAACTTGCTAAACAT...TATTAGACAGGAGAAAAGCTGTGATTGCAAGTGAGCCAGAGACCTCATCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR TCA 90 bp | TTCCCAACTCCTAAAGCTGTTTCAGCAGTCATGGTCTTGATAGACTCTTCTGAAATGTGTCAGGAGCTGTaGCTTTTCAGGGAATATTTT | + |
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Preference number: 4 (lower is better) Translates to: FPTPKAVSAVMVLIDSSEMCQEL*LFREYF Trigger: AAAATATTCCCTGAAAAGTCACAGCTCCTGACACAT...TTCAGAAGAGTCTATCAAGACCATGACTGCTGAAACAGCTTTAGGAGTTGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR TCA 90 bp | TCACAGCTTTTCTCCTGTCTAATACTTGTAACTTCGACTAGAGGCTCTAGCGCTATGTCTGATAAGGTGTaGCTTCTTGTTGAAGATACT | + |
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Preference number: 4 (lower is better) Translates to: SQLFSCLILVTSTRGSSAMSDKV*LLVEDT Trigger: AGTATCTTCAACAAGAAGTCACACCTTATCAGACAT...AGCGCTAGAGCCTCTAGTCGAAGTTACAAGTATTAGACAGGAGAAAAGCTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR CCA 90 bp | GTCTTCTGGGAAAACTTATTTTCATATCGTCTACCTCTACAAACAGCCTCCTTTTGGTGGATAGCAAGCTaGGACTTTTGTGCAAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: VFWENLFSYRLPLQTASFWWIAS*DFCAKV Trigger: AACTTTTGCACAAAAGTCCCAGCTTGCTATCCACCA...AAAGGAGGCTGTTTGTAGAGGTAGACGATATGAAAATAAGTTTTCCCAGAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| 3UTR CAA 72 bp | CAAATAATCAGTCTGAACTCTTACTCAGAGTACCCTTaGTTAGCATTCTTTAGTGGTCGATGGGTTATCCCT | + |
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Preference number: 4 (lower is better) Translates to: QIISLNSYSEYP*LAFFSGRWVIP Trigger: AGGGATAACCCATCGACCACTAAAGAATGCTAACAAAGGGTACTCTGAGTAAGAGTTCAGACTGATTATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR GCA 90 bp | TTTCAGATGAGGTCTCTGGCTCACTTGCAATCACAGCTTTTCTCCTGTCTAATACTTTTTCACAGCTACTaGATTTATAGATCTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: FQMRSLAHLQSQLFSCLILFHSY*IYRSSL Trigger: GAGAGAAGATCTATAAATGCAGTAGCTGTGAAAAAG...TATTAGACAGGAGAAAAGCTGTGATTGCAAGTGAGCCAGAGACCTCATCTGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR CAA 90 bp | TGCTCTTACCCACTGAGCCATCTCACCAGCCCTGACAGACAACTTTTTACAGTAATCAGGTTTGGTGGTTaGATTACCCAAGAAGACAAG | + |
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Preference number: 5 (lower is better) Translates to: CSYPLSHLTSPDRQLFTVIRFGG*ITQEDK Trigger: CTTGTCTTCTTGGGTAATCAAACCACCAAACCTGAT...TACTGTAAAAAGTTGTCTGTCAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR CAA 90 bp | TGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAGTCAGTGCTCTTACCAATGAGTTGCACCTTTaGAACAAATGCCTTCCCACA | + |
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Preference number: 5 (lower is better) Translates to: WLLGFELRTFRRAVSALTNELHL*NKCLPT Trigger: TGTGGGAAGGCATTTGTTCAAAAGGTGCAACTCATT...GGTAAGAGCACTGACTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR CAA 90 bp | TTCCCAACTCCTAAAGCTGTTTCAGCAGTCATGGTCTTGATAGACTCTTCTGAATCCCGTGTGAATCCTTaGATGCCTAATGAGAAGCGA | + |
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Preference number: 5 (lower is better) Translates to: FPTPKAVSAVMVLIDSSESRVNP*MPNEKR Trigger: TCGCTTCTCATTAGGCATCAAAGGATTCACACGGGA...TTCAGAAGAGTCTATCAAGACCATGACTGCTGAAACAGCTTTAGGAGTTGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR CAA 90 bp | TGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAGTCAGTGCTCTTACCATAAGGTGTGACTTCTaGTTGAAGATACTACCACAC | + |
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Preference number: 5 (lower is better) Translates to: WLLGFELRTFRRAVSALTIRCDF*LKILPH Trigger: GTGTGGTAGTATCTTCAACAAGAAGTCACACCTTAT...GGTAAGAGCACTGACTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR CAA 90 bp | TGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAGTCAGTGCTCTTACCAAAACATTATCTCCATaGCCTCTCTCCATCCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: WLLGFELRTFRRAVSALTKTLSP*PLSILL Trigger: TAAAAGGATGGAGAGAGGCAATGGAGATAATGTTTT...GGTAAGAGCACTGACTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS-3UTR CAA 90 bp | TCACAGCTTTTCTCCTGTCTAATACTTGTAACTTCGACTAGAGGCTCTAGCGCTCTGATGCTTAATGAGTaGCACCTTTTGAACAAATGC | + |
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Preference number: 5 (lower is better) Translates to: SQLFSCLILVTSTRGSSALMLNE*HLLNKC Trigger: GCATTTGTTCAAAAGGTGCAACTCATTAAGCATCAG...AGCGCTAGAGCCTCTAGTCGAAGTTACAAGTATTAGACAGGAGAAAAGCTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112528.8 |
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| CDS TCA 90 bp | TTAGGCATTCTTCATCCATTATCCGTGACTCTTGCTGATCTAGCTTaGAAGTTACATCAGGTTTGGTGGTTTGATTACCCAAGAAGACAA | + |
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Preference number: 5 (lower is better) Translates to: LGILHPLSVTLADLA*KLHQVWWFDYPRRQ Trigger: TTGTCTTCTTGGGTAATCAAACCACCAAACCTGATGTAACTTTCAAGCTAGATCAGCAAGAGTCACGGATAATGGATGAAGAATGCCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086686.7 ENSMUST00000112528.8 ENSMUST00000147631.8 |
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| CDS TCA 72 bp | CCCGCCGAAAGCTTTCTGACGTTCTGGTTCTTCTCCTaGGTGAGTCTTTTGGTGGATAGCAAGCTGGGACTT | + |
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Preference number: 6 (lower is better) Translates to: PAESFLTFWFFS*VSLLVDSKLGL Trigger: AAGTCCCAGCTTGCTATCCACCAAAAGACTCACTCAGGAGAAGAACCAGAACGTCAGAAAGCTTTCGGCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086686.7 ENSMUST00000112528.8 |
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