Pregenerated sensors for ZFP60 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037640Ensembl transcript IDs: ENSMUST00000042641.14, ENSMUST00000108336.8, ENSMUST00000130997.8, ENSMUST00000136373.8, ENSMUST00000167955.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTTGGATAGAAGACACAGGCTAAAGGGCAGGAATGCAGCCGGGTaGCTTAAGTTCATGCTTACCCCACACAAGACCCTGGGTTCAATC | + |
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Preference number: 1 (lower is better) Translates to: LLDRRHRLKGRNAAG*LKFMLTPHKTLGSI Trigger: GATTGAACCCAGGGTCTTGTGTGGGGTAAGCATGAACTTAAGTCACCCGGCTGCATTCCTGCCCTTTAGCCTGTGTCTTCTATCCAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR CCA 90 bp | GCATCAGATTTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCGGCGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASDFVTDGCEPPCGC*DLNSGPLEEQSALL Trigger: TAAGAGCGCCGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAAATCTGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR TCA 90 bp | GGCAGGCAGTCTAAGAGAAGCCAAAATAAAATAGCAGGAGCATCCTaGCCGCTGGCTCACAGACTAGAGGTGGGTAAATCTCCAAGAATC | + |
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Preference number: 1 (lower is better) Translates to: GRQSKRSQNKIAGAS*PLAHRLEVGKSPRI Trigger: GATTCTTGGAGATTTACCCACCTCTAGTCTGTGAGCCAGCGGTCAGGATGCTCCTGCTATTTTATTTTGGCTTCTCTTAGACTGCCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR GCA 90 bp | GAACCACATTCTGATATCTTGCTCAGCAGCTACAGGGGGAGCATTTaGCCAAGCAGGCAGTTTAACAGAAGCCAGGGTAAGCAGTTAAGT | + |
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Preference number: 1 (lower is better) Translates to: EPHSDILLSSYRGSI*PSRQFNRSQGKQLS Trigger: ACTTAACTGCTTACCCTGGCTTCTGTTAAACTGCCTGCTTGGGCAAATGCTCCCCCTGTAGCTGCTGAGCAAGATATCAGAATGTGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR TCA 90 bp | AAATGGTCTCAGCAGCATGAGATGGAGGGGACTGCACTGTCCTGCTaGGTCACAAATGCATTTTATCTTAATGTTTGGGCAGAGAACATA | + |
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Preference number: 1 (lower is better) Translates to: KWSQQHEMEGTALSC*VTNAFYLNVWAENI Trigger: TATGTTCTCTGCCCAAACATTAAGATAAAATGCATTTGTGACTCAGCAGGACAGTGCAGTCCCCTCCATCTCATGCTGCTGAGACCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR GCA 90 bp | GGTAGCTGCCACCTTAGTGTTTCTGGACACGCTGGCAACAAAACATaGCATCTACAATGTGTTCTTACCTCAAATGTTTCAACTGAACCT | + |
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Preference number: 1 (lower is better) Translates to: GSCHLSVSGHAGNKT*HLQCVLTSNVSTEP Trigger: AGGTTCAGTTGAAACATTTGAGGTAAGAACACATTGTAGATGGCATGTTTTGTTGCCAGCGTGTCCAGAAACACTAAGGTGGCAGCTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR GCA 90 bp | ACACACACACACCTACATATACAGGGGAGAGAAGCATTGTATAAGTaGTGTAACTCAAGAGAACCCTGTTTAATACAGGTGGAAACAATA | + |
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Preference number: 1 (lower is better) Translates to: THTHLHIQGREALYK*CNSREPCLIQVETI Trigger: TATTGTTTCCACCTGTATTAAACAGGGTTCTCTTGAGTTACAGCACTTATACAATGCTTCTCTCCCCTGTATATGTAGGTGTGTGTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR CCA 90 bp | CTTGTTAGTAATATTTCGATTAGCATCTCCTTCTTGATAATTCTGTaGCTCCTTGATTACACTATAGCCAGGGCCATTACTAACACTGAC | + |
|
Preference number: 1 (lower is better) Translates to: LVSNISISISFLIIL*LLDYTIARAITNTD Trigger: GTCAGTGTTAGTAATGGCCCTGGCTATAGTGTAATCAAGGAGCCACAGAATTATCAAGAAGGAGATGCTAATCGAAATATTACTAACAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136373.8 |
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| 3UTR-3UTR CCA 90 bp | CATTCTGATATCTTGCTCAGCAGCTACAGGGGGAGCATTTGCCCAAGCAGGCAGATAGCACAGGAGCCATaGGATGTAATTGGTGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: HSDILLSSYRGSICPSRQIAQEP*DVIGGK Trigger: CTTGCCACCAATTACATCCCATGGCTCCTGTGCTAT...CTGCCTGCTTGGGCAAATGCTCCCCCTGTAGCTGCTGAGCAAGATATCAGAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR CAA 90 bp | GATTTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTTTGGAAGAGCAGTCGGCGCTCTTAACCACT | + |
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Preference number: 2 (lower is better) Translates to: DFVTDGCEPPCGCWD*NSGPLEEQSALLTT Trigger: AGTGGTTAAGAGCGCCGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGCATCAGATTTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGTACTGGAGGGCTGCATaGGGCTTTTCTAAACTATCT | + |
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Preference number: 2 (lower is better) Translates to: RGHQISLQMVVSHHVVAGYWRAA*GFSKLS Trigger: AGATAGTTTAGAAAAGCCTCATGCAGCCCTCCAGTA...CCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAAATCTGATGCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTTCTGGACACGCTGGCAACAAAACATGCCATCTACAATGTGTTCTTACCTCATAGCAGGAGCATCCTaGCCGCTGGCTCACAGACTA | + |
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Preference number: 2 (lower is better) Translates to: CFWTRWQQNMPSTMCSYLIAGAS*PLAHRL Trigger: TAGTCTGTGAGCCAGCGGTCAGGATGCTCCTGCTAT...GAGGTAAGAACACATTGTAGATGGCATGTTTTGTTGCCAGCGTGTCCAGAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR-3UTR GCA 90 bp | TACACTATAGCCAGGGCCATTACTAACACTGACGCCCTGGACGTCCGAAGTTTTCAGGGCTCTTTCTCCTaGTCTAGTAAGACGATCAGA | + |
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Preference number: 2 (lower is better) Translates to: YTIARAITNTDALDVRSFQGSFS*SSKTIR Trigger: TCTGATCGTCTTACTAGAGCAGGAGAAAGAGCCCTG...AAAACTTCGGACGTCCAGGGCGTCAGTGTTAGTAATGGCCCTGGCTATAGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136373.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCTACAGGGGGAGCATTTGCCCAAGCAGGCAGTTTAACAGAAGCCAGGGTGTCTTCCTTTTCTCATaGTGTATAAGCTCACCATTT | + |
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Preference number: 2 (lower is better) Translates to: SSYRGSICPSRQFNRSQGVFLFS*CISSPF Trigger: AAATGGTGAGCTTATACAGCATGAGAAAAGGAAGAC...ACCCTGGCTTCTGTTAAACTGCCTGCTTGGGCAAATGCTCCCCCTGTAGCTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGCAGTCGGCGCTCTTAACCACTGAGCCATCTCTCCAGCCCCTAAAACATAGTCTTTATTCCAGTTaGCTGGGACTACACTCATTT | + |
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Preference number: 2 (lower is better) Translates to: EEQSALLTTEPSLQPLKHSLYSS*LGLHSF Trigger: AAATGAGTGTAGTCCCAGCCAACTGGAATAAAGACT...ATGTTTTAGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCGCCGACTGCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR-3UTR TCA 90 bp | CATTCTGATATCTTGCTCAGCAGCTACAGGGGGAGCATTTGCCCAAGCAGGCAGATGTCAAACCACCTTTaGTTTTCAACTGAAGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: HSDILLSSYRGSICPSRQMSNHL*FSTEGL Trigger: AAGACCTTCAGTTGAAAATCAAAGGTGGTTTGACAT...CTGCCTGCTTGGGCAAATGCTCCCCCTGTAGCTGCTGAGCAAGATATCAGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCATGTCAAACCACCTTTaGTTTTCAACTGAAGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFMSNHL*FSTEGL Trigger: AAGACCTTCAGTTGAAAATCAAAGGTGGTTTGACAT...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGTAAGACGATCAGATCTGGCTTGGGAATGCAACGTCCCATTATTTCATTTACACTGTGTATCTGAGTaGCCTGGAGCTCACAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: LVRRSDLAWECNVPLFHLHCVSE*PGAHSN Trigger: ATTGCTGTGAGCTCCAGGTCACTCAGATACACAGTG...TAAATGAAATAATGGGACGTTGCATTCCCAAGCCAGATCTGATCGTCTTACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136373.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGTAAGACGATCAGATCTGGCTTGGGAATGCAACGTCCCATTATTTCATTTAAACTCACTGTGTATCTaGGTGACCTGGAGCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: LVRRSDLAWECNVPLFHLNSLCI*VTWSSQ Trigger: CTGTGAGCTCCAGGTCACTCAGATACACAGTGAGTT...TAAATGAAATAATGGGACGTTGCATTCCCAAGCCAGATCTGATCGTCTTACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136373.8 |
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| 3UTR-3UTR CCA 90 bp | CACATGACGCTATCATTCAAGATAGGCACTAACAAAATGAGGGAATTTTCAAGACTCAGCAGCATGAGATaGAGGGGACTGCACTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: HMTLSFKIGTNKMREFSRLSSMR*RGLHCP Trigger: AGGACAGTGCAGTCCCCTCCATCTCATGCTGCTGAG...TCTTGAAAATTCCCTCATTTTGTTAGTGCCTATCTTGAATGATAGCGTCATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTTCTGGACACGCTGGCAACAAAACATGCCATCTACAATGTGTTCTTACCTCACTGTTCTTCCTAAGTaGGCTGAATTGTGTTTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: CFWTRWQQNMPSTMCSYLTVLPK*AELCLV Trigger: CACCAAACACAATTCAGCTCACTTAGGAAGAACAGT...GAGGTAAGAACACATTGTAGATGGCATGTTTTGTTGCCAGCGTGTCCAGAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR-3UTR TCA 90 bp | GTACTTATTCACCAACAGCTAGTTTATAGACATCTCTGCACGAAAGCTAAAGAATTTATGCTGAAGGCCTaGGCTTCAGTTGCGGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: VLIHQQLVYRHLCTKAKEFMLKA*ASVAGL Trigger: AAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAA...TTCTTTAGCTTTCGTGCAGAGATGTCTATAAACTAGCTGTTGGTGAATAAGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTCTGGACACGCTGGCAACAAAACATGCCATCTACAATGTGTTCTTACCTCTTTTGTTCATGTTTATaGAGAGTCCACCAGAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: CFWTRWQQNMPSTMCSYLFCSCL*RVHQRK Trigger: TTTTCTCTGGTGGACTCTCCATAAACATGAACAAAA...GAGGTAAGAACACATTGTAGATGGCATGTTTTGTTGCCAGCGTGTCCAGAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR-3UTR CCA 90 bp | CACATGACGCTATCATTCAAGATAGGCACTAACAAAATGAGGGAATTTTCAAGATTTTGTTTGGTTGGTTaGTTTCCCGAGACAGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: HMTLSFKIGTNKMREFSRFCLVG*FPETGF Trigger: AAACCCTGTCTCGGGAAACCAACCAACCAAACAAAA...TCTTGAAAATTCCCTCATTTTGTTAGTGCCTATCTTGAATGATAGCGTCATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR-3UTR TCA 90 bp | CACATGACGCTATCATTCAAGATAGGCACTAACAAAATGAGGGAATTTTCAAGACAACAGTATTTTCTGTaGACAGAATTCCCACTCTCA | + |
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Preference number: 2 (lower is better) Translates to: HMTLSFKIGTNKMREFSRQQYFL*TEFPLS Trigger: TGAGAGTGGGAATTCTGTTCACAGAAAATACTGTTG...TCTTGAAAATTCCCTCATTTTGTTAGTGCCTATCTTGAATGATAGCGTCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR CAA 90 bp | AGTTCTTCCCAGACTCCTTTCAGTCCCAGTTTGTTAATGACTTCTTaGATGTTCAGTAAAATTTCCATAAAGTCTTATCCGTCTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: SSSQTPFSPSLLMTS*MFSKISIKSYPSSF Trigger: AAAGGAAGACGGATAAGACTTTATGGAAATTTTACTGAACATCAAAGAAGTCATTAACAAACTGGGACTGAAAGGAGTCTGGGAAGAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR CAA 90 bp | AGACATTTCTTTCTTGTTAGTAATATTTCGATTAGCATCTCCTTCTaGATAATTCTGTGGCTCCTTGATTACACTATAGCCAGGGCCATT | + |
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Preference number: 2 (lower is better) Translates to: RHFFLVSNISISISF*IILWLLDYTIARAI Trigger: AATGGCCCTGGCTATAGTGTAATCAAGGAGCCACAGAATTATCAAGAAGGAGATGCTAATCGAAATATTACTAACAAGAAAGAAATGTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136373.8 |
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| 3UTR-3UTR CAA 90 bp | TACACTATAGCCAGGGCCATTACTAACACTGACGCCCTGGACGTCCGAAGTTTTACCTGTCTCCAAACCTaGGCTCGGCCTGCCTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: YTIARAITNTDALDVRSFTCLQT*ARPACF Trigger: GAAACAGGCAGGCCGAGCCAAGGTTTGGAGACAGGT...AAAACTTCGGACGTCCAGGGCGTCAGTGTTAGTAATGGCCCTGGCTATAGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136373.8 |
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| 3UTR-3UTR CAA 90 bp | GTATCCTGTAACATGCATGTGATGAGTTCATCTGTGCTTCCATGTAACACAAGCTTGAACTCAGGACCTTaGGAAGAGCAGTCGGCGCTC | + |
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Preference number: 3 (lower is better) Translates to: VSCNMHVMSSSVLPCNTSLNSGP*EEQSAL Trigger: GAGCGCCGACTGCTCTTCCAAAGGTCCTGAGTTCAA...GCTTGTGTTACATGGAAGCACAGATGAACTCATCACATGCATGTTACAGGATAC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR CCA 72 bp | GATCTATTTTCAGCTTCAAAACCTGTCTCCAAACCTTaGCTCGGCCTGCCTGTTTCTTTCTTCACAGCCATC | + |
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Preference number: 3 (lower is better) Translates to: DLFSASKPVSKP*LGLPVSFFTAI Trigger: GATGGCTGTGAAGAAAGAAACAGGCAGGCCGAGCCAAGGTTTGGAGACAGGTTTTGAAGCTGAAAATAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136373.8 |
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| 3UTR TCA 72 bp | TTTCACGACAGCATGGATACTTTTATGCTGAAGGCCTaGGCTTCAGTTGCGGGTCTTTCCACATTCTTTACA | + |
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Preference number: 3 (lower is better) Translates to: FHDSMDTFMLKA*ASVAGLSTFFT Trigger: TGTAAAGAATGTGGAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCGTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
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| 3UTR TCA 72 bp | CCAGAGAAAATGGAGCCAGACACAATTATAGCCAACTaGAAGTCTTTATTCCAGTTGGCTGGGACTACACTC | + |
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Preference number: 3 (lower is better) Translates to: PEKMEPDTIIAN*KSLFQLAGTTL Trigger: GAGTGTAGTCCCAGCCAACTGGAATAAAGACTTTCAGTTGGCTATAATTGTGTCTGGCTCCATTTTCTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR TCA 72 bp | GCTTACCCCACACAAGACCCTGGGTTCAATCAACTCTaGAATGTTAATAAAGGCAAGAGGAAGGCCAAATCT | + |
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Preference number: 3 (lower is better) Translates to: AYPTQDPGFNQL*NVNKGKRKAKS Trigger: AGATTTGGCCTTCCTCTTGCCTTTATTAACATTTCAGAGTTGATTGAACCCAGGGTCTTGTGTGGGGTAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR-3UTR CAA 90 bp | GTACTTATTCACCAACAGCTAGTTTATAGACATCTCTGCACGAAAGCTAAAGAAAGGCCTGAGCTTCAGTaGCGGGTCTTTCCACATTCT | + |
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Preference number: 3 (lower is better) Translates to: VLIHQQLVYRHLCTKAKERPELQ*RVFPHS Trigger: AGAATGTGGAAAGACCCGCAACTGAAGCTCAGGCCT...TTCTTTAGCTTTCGTGCAGAGATGTCTATAAACTAGCTGTTGGTGAATAAGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR CCA 72 bp | CCTGGCTTCAAATTGGGCTATTTTTGTTCATGTTTATaGAGAGTCCACCAGAGAAAATGGAGCCAGACACAA | + |
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Preference number: 3 (lower is better) Translates to: PGFKLGYFCSCL*RVHQRKWSQTQ Trigger: TTGTGTCTGGCTCCATTTTCTCTGGTGGACTCTCCATAAACATGAACAAAAATAGCCCAATTTGAAGCCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR GCA 72 bp | CACCTTAGTGTTTCTGGACACGCTGGCAACAAAACATaGCATCTACAATGTGTTCTTACCTCAAATGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: HLSVSGHAGNKT*HLQCVLTSNVS Trigger: TGAAACATTTGAGGTAAGAACACATTGTAGATGGCATGTTTTGTTGCCAGCGTGTCCAGAAACACTAAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR GCA 72 bp | CACCTACATATACAGGGGAGAGAAGCATTGTATAAGTaGTGTAACTCAAGAGAACCCTGTTTAATACAGGTG | + |
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Preference number: 3 (lower is better) Translates to: HLHIQGREALYK*CNSREPCLIQV Trigger: CACCTGTATTAAACAGGGTTCTCTTGAGTTACAGCACTTATACAATGCTTCTCTCCCCTGTATATGTAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR-3UTR CAA 90 bp | ATGACGCTATCATTCAAGATAGGCACTAACAAAATGAGGGAATTTTCAAGATGGTTTTTGTTTGGTTGGTaGGTTTCCCGAGACAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: MTLSFKIGTNKMREFSRWFLFGW*VSRDRV Trigger: AACCCTGTCTCGGGAAACCAACCAACCAAACAAAAA...CCATCTTGAAAATTCCCTCATTTTGTTAGTGCCTATCTTGAATGATAGCGTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR TCA 72 bp | CACAAGCATGAGATAGACTATCAGTATCTTGCAGGATaGCAAATGTCTTCCAGTTGTTGGGGTTTGTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: HKHEIDYQYLAG*QMSSSCWGLFC Trigger: ACAAAACAAACCCCAACAACTGGAAGACATTTGTCATCCTGCAAGATACTGATAGTCTATCTCATGCTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR GCA 72 bp | CCTGCTCTAGTAAGACGATCAGATCTGGCTTGGGAATaGAACGTCCCATTATTTCATTTAGATAAGTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: PALVRRSDLAWE*NVPLFHLDKFV Trigger: AACAAACTTATCTAAATGAAATAATGGGACGTTGCATTCCCAAGCCAGATCTGATCGTCTTACTAGAGCAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136373.8 |
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| 3UTR CCA 72 bp | AATTATAGCCAACTGAAAGTCTTTATTCCAGTTGGCTaGGACTACACTCATTTATTCGGGATCCATATACAC | + |
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Preference number: 3 (lower is better) Translates to: NYSQLKVFIPVG*DYTHLFGIHIH Trigger: GTGTATATGGATCCCGAATAAATGAGTGTAGTCCCAGCCAACTGGAATAAAGACTTTCAGTTGGCTATAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR CCA 72 bp | AATATTTCGATTAGCATCTCCTTCTTGATAATTCTGTaGCTCCTTGATTACACTATAGCCAGGGCCATTACT | + |
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Preference number: 3 (lower is better) Translates to: NISISISFLIIL*LLDYTIARAIT Trigger: AGTAATGGCCCTGGCTATAGTGTAATCAAGGAGCCACAGAATTATCAAGAAGGAGATGCTAATCGAAATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136373.8 |
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| 3UTR TCA 72 bp | ATTTCCTTAAGAGTAAGGATGGATCTGTGGTATAAATaGTATGCCATCTTGGCTGATATCATAAGGGATAAA | + |
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Preference number: 3 (lower is better) Translates to: ISLRVRMDLWYK*YAILADIIRDK Trigger: TTTATCCCTTATGATATCAGCCAAGATGGCATATCATTTATACCACAGATCCATCCTTACTCTTAAGGAAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| CDS-3UTR TCA 90 bp | AGCAGCTACAGGGGGAGCATTTGCCCAAGCAGGCAGTTTAACAGAAGCCAGGGTGCTGAGCCAGCACAGTaGAGGCCTTTCCACACACCT | + |
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Preference number: 4 (lower is better) Translates to: SSYRGSICPSRQFNRSQGAEPAQ*RPFHTP Trigger: AGGTGTGTGGAAAGGCCTTCACTGTGCTGGCTCAGC...ACCCTGGCTTCTGTTAAACTGCCTGCTTGGGCAAATGCTCCCCCTGTAGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCTCGTGCCGAGTAAGCTaGGCCAGCACAGTGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFSCRVS*ASTVKA Trigger: GGCCTTCACTGTGCTGGCTCAGCTTACTCGGCACGA...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
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| CDS-3UTR TCA 90 bp | GAAGAGCAGTCGGCGCTCTTAACCACTGAGCCATCTCTCCAGCCCCTAAAACATGCTGAGCCAGAACAGTaGAGGCCTTTCCACAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: EEQSALLTTEPSLQPLKHAEPEQ*RPFHSP Trigger: AGGACTGTGGAAAGGCCTTCACTGTTCTGGCTCAGC...ATGTTTTAGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCGCCGACTGCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCTGGTGCCGTGTGAGCTaGGCCAGAACAGTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFWCRVS*ARTVKA Trigger: GGCCTTCACTGTTCTGGCTCAGCTCACACGGCACCA...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTTTGGAAGAGCAGTCGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPLEEQSAL Trigger: GAGCGCCGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCGCTGAGCCAGCACAGTaGAGGCCTTTCCACACACCT | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFAEPAQ*RPFHTP Trigger: AGGTGTGTGGAAAGGCCTTCACTGTGCTGGCTCAGC...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCGCATCTGAGGGAGTCTaGAGGTCTTCCCACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFASEGV*RSSHSP Trigger: AGGACTGTGGGAAGACCTTCAGACTCCCTCAGATGC...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCGCTGAGCCAGAACAGTaGAGGCCTTTCCACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFAEPEQ*RPFHSP Trigger: AGGACTGTGGAAAGGCCTTCACTGTTCTGGCTCAGC...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCATCAGATTTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGCGATCAGATCTGGCTTaGGAATGCAACGTCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RGHQISLQMVVSHHVVAGRSDLA*ECNVPP Trigger: TGGTGGGACGTTGCATTCCCAAGCCAGATCTGATCG...CCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAAATCTGATGCCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGCTACAGGGGGAGCATTTGCCCAAGCAGGCAGTTTAACAGAAGCCAGGGTATGTTGCAGGAGGTTTaGGCGACGATTAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSYRGSICPSRQFNRSQGMLQEV*ATIKGF Trigger: AAAGCCTTTAATCGTCGCTCAAACCTCCTGCAACAT...ACCCTGGCTTCTGTTAAACTGCCTGCTTGGGCAAATGCTCCCCCTGTAGCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR CCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCCGATCAGATCTGGCTTaGGAATGCAACGTCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFRSDLA*ECNVPP Trigger: TGGTGGGACGTTGCATTCCCAAGCCAGATCTGATCG...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CATTCTGATATCTTGCTCAGCAGCTACAGGGGGAGCATTTGCCCAAGCAGGCAGGATTTCTTTCCATTATaGATCGTCTGGTGCCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSDILLSSYRGSICPSRQDFFPL*IVWCRV Trigger: CACACGGCACCAGACGATTCATAATGGAAAGAAATC...CTGCCTGCTTGGGCAAATGCTCCCCCTGTAGCTGCTGAGCAAGATATCAGAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR GCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCAACCTTGGCTCGGCCTaGCTGTTTCTTTCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFNLGSA*LFLSSQ Trigger: CTGTGAAGAAAGAAACAGGCAGGCCGAGCCAAGGTT...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCAATTCTGTGGCTCCTTaGTTACACTATAGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFNSVAP*LHYSQG Trigger: GCCCTGGCTATAGTGTAATCAAGGAGCCACAGAATT...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CATTCTGATATCTTGCTCAGCAGCTACAGGGGGAGCATTTGCCCAAGCAGGCAGTCAGAAAGGTATAGATaGAGCCTAAAAGCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSDILLSSYRGSICPSRQSERYR*SLKALP Trigger: TGGCAAGGCTTTTAGGCTTCATCTATACCTTTCTGA...CTGCCTGCTTGGGCAAATGCTCCCCCTGTAGCTGCTGAGCAAGATATCAGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCCACACAGCTTACACTTaGAAGGCTTCTCATCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFHTAYT*KASHRC Trigger: ACACCGATGAGAAGCCTTTCAAGTGTAAGCTGTGTG...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCCTTACGTCTGAAGGCTaGCTCACACAGCTTACACTT | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFLTSEG*LTQLTL Trigger: AAGTGTAAGCTGTGTGAGTCAGCCTTCAGACGTAAG...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGAGGGCATCAGATTTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCCTTACGTCTGAAGGCTaGCTCACACAGCTTACACTT | + |
|
Preference number: 4 (lower is better) Translates to: QKRASDFVTDGCEPPCGCLTSEG*LTQLTL Trigger: AAGTGTAAGCTGTGTGAGTCAGCCTTCAGACGTAAG...GCAACCACATGGTGGCTCACAACCATCTGTAACGAAATCTGATGCCCTCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | GAAGAGCAGTCGGCGCTCTTAACCACTGAGCCATCTCTCCAGCCCCTAAAACATAGCTGGCTGGAAAAATaGAAAGCCTTTCCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: EEQSALLTTEPSLQPLKHSWLEK*KAFPHS Trigger: AGAATGTGGAAAGGCTTTTCATTTTTCCAGCCAGCT...ATGTTTTAGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCGCCGACTGCTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCAGACTTCTGATGTCTTaGAAGCATCTGAGGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFRLLMS*KHLRES Trigger: AGACTCCCTCAGATGCTTTCAAGACATCAGAAGTCT...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCATGTTGCAGGAGGTTTaGGCGACGATTAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFMLQEV*ATIKGF Trigger: AAAGCCTTTAATCGTCGCTCAAACCTCCTGCAACAT...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCCCACACACCTTACAATaGAAAGGTCTGTCCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFPHTLQ*KGLSSE Trigger: TTCTGAGGACAGACCTTTTCATTGTAAGGTGTGTGG...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGAGGGCATCAGATTTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCCCACACACCTTACAATaGAAAGGTCTGTCCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QKRASDFVTDGCEPPCGCPHTLQ*KGLSSE Trigger: TTCTGAGGACAGACCTTTTCATTGTAAGGTGTGTGG...GCAACCACATGGTGGCTCACAACCATCTGTAACGAAATCTGATGCCCTCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCGATTTGTCTTCAGTGTaGATGTTCTCGTGCCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFDLSSV*MFSCRV Trigger: TACTCGGCACGAGAACATTCACACTGAAGACAAATC...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CATTCTGATATCTTGCTCAGCAGCTACAGGGGGAGCATTTGCCCAAGCAGGCAGGGTCTCTCATCAGAATaGATTTTCTCATGTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: HSDILLSSYRGSICPSRQGLSSE*IFSCCM Trigger: CATGCAACATGAGAAAATTCATTCTGATGAGAGACC...CTGCCTGCTTGGGCAAATGCTCCCCCTGTAGCTGCTGAGCAAGATATCAGAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCGATTTCTTTCCATTATaGATCGTCTGGTGCCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFDFFPL*IVWCRV Trigger: CACACGGCACCAGACGATTCATAATGGAAAGAAATC...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCATCAGATTTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGCAAAGGGTTTCTCATTaGTGTGAGTATCGTAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGHQISLQMVVSHHVVAGQRVSH*CEYRSV Trigger: GACACTACGATACTCACACCAATGAGAAACCCTTTG...CCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAAATCTGATGCCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | ATGACGCTATCATTCAAGATAGGCACTAACAAAATGAGGGAATTTTCAAGATGGTCGTGCCGAGTAAGCTaGGCCAGCACAGTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MTLSFKIGTNKMREFSRWSCRVS*ASTVKA Trigger: GGCCTTCACTGTGCTGGCTCAGCTTACTCGGCACGA...CCATCTTGAAAATTCCCTCATTTTGTTAGTGCCTATCTTGAATGATAGCGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCTCAGAAAGGTATAGATaGAGCCTAAAAGCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFSERYR*SLKALP Trigger: TGGCAAGGCTTTTAGGCTTCATCTATACCTTTCTGA...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCAGCTGGCTGGAAAAATaGAAAGCCTTTCCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFSWLEK*KAFPHS Trigger: AGAATGTGGAAAGGCTTTTCATTTTTCCAGCCAGCT...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCGGTTTCACACCACTGTaGATAATCCTATGTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFGFTPL*IILCST Trigger: TGTGGAACATAGGATTATTCACAGTGGTGTGAAACC...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGAGGGCATCAGATTTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCGGTTTCACACCACTGTaGATAATCCTATGTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QKRASDFVTDGCEPPCGCGFTPL*IILCST Trigger: TGTGGAACATAGGATTATTCACAGTGGTGTGAAACC...GCAACCACATGGTGGCTCACAACCATCTGTAACGAAATCTGATGCCCTCTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | ATGACGCTATCATTCAAGATAGGCACTAACAAAATGAGGGAATTTTCAAGATGGTGGTGCCGTGTGAGCTaGGCCAGAACAGTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MTLSFKIGTNKMREFSRWWCRVS*ARTVKA Trigger: GGCCTTCACTGTTCTGGCTCAGCTCACACGGCACCA...CCATCTTGAAAATTCCCTCATTTTGTTAGTGCCTATCTTGAATGATAGCGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCGTGTGGATCCTTTCATaGATTCTAAGGCCTGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFVWILS*ILRPVL Trigger: TAGTACAGGCCTTAGAATTCATGAAAGGATCCACAC...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCGGGTTCTTGCCAGTATaGATTCTAAAGTGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFGFLPV*ILKCPR Trigger: TCTTGGACACTTTAGAATTCATACTGGCAAGAACCC...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR CCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCCAAAGGGTTTCTCATTaGTGTGAGTATCGTAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFQRVSH*CEYRSV Trigger: GACACTACGATACTCACACCAATGAGAAACCCTTTG...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCATGCTGATGAAGGTTTaGCTTACAACCAAAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFMLMKV*LTTKAL Trigger: AAGTGCTTTGGTTGTAAGTCAAACCTTCATCAGCAT...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCAGCAGGGTAGGAAGATaGAAAGACTTTCCACATATA | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFSRVGR*KDFPHI Trigger: TATATGTGGAAAGTCTTTTCATCTTCCTACCCTGCT...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCGGTCTCTCATCAGAATaGATTTTCTCATGTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFGLSSE*IFSCCM Trigger: CATGCAACATGAGAAAATTCATTCTGATGAGAGACC...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| 3UTR CAA 72 bp | AGATCTATTTTCAGCTTCAAAACCTGTCTCCAAACCTaGGCTCGGCCTGCCTGTTTCTTTCTTCACAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSIFSFKTCLQT*ARPACFFLHSH Trigger: ATGGCTGTGAAGAAAGAAACAGGCAGGCCGAGCCAAGGTTTGGAGACAGGTTTTGAAGCTGAAAATAGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136373.8 |
||
| CDS-3UTR GCA 90 bp | CACTGTCCTGCTGAGTCACAAATGCATTTTATCTTAATGTTTGGGCAGAGAACAAACCTTGGCTCGGCCTaGCTGTTTCTTTCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HCPAESQMHFILMFGQRTNLGSA*LFLSSQ Trigger: CTGTGAAGAAAGAAACAGGCAGGCCGAGCCAAGGTT...TGTTCTCTGCCCAAACATTAAGATAAAATGCATTTGTGACTCAGCAGGACAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | GTATCCTGTAACATGCATGTGATGAGTTCATCTGTGCTTCCATGTAACACAAGCGATTTGTCTTCAGTGTaGATGTTCTCGTGCCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VSCNMHVMSSSVLPCNTSDLSSV*MFSCRV Trigger: TACTCGGCACGAGAACATTCACACTGAAGACAAATC...GCTTGTGTTACATGGAAGCACAGATGAACTCATCACATGCATGTTACAGGATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | GACCACACAGTATCCTGTAACATGCATGTGATGAGTTCATCTGTGCTTCCATGTGGGTTCTTGCCAGTATaGATTCTAAAGTGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DHTVSCNMHVMSSSVLPCGFLPV*ILKCPR Trigger: TCTTGGACACTTTAGAATTCATACTGGCAAGAACCC...ACATGGAAGCACAGATGAACTCATCACATGCATGTTACAGGATACTGTGTGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR CCA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCTTCCTTGCACTGAAATaGCTTCACATCATAATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFFLALK*LHIIMN Trigger: ATTCATTATGATGTGAAGCCATTTCAGTGCAAGGAA...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | GTATCCTGTAACATGCATGTGATGAGTTCATCTGTGCTTCCATGTAACACAAGCGTGTGGATCCTTTCATaGATTCTAAGGCCTGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: VSCNMHVMSSSVLPCNTSVWILS*ILRPVL Trigger: TAGTACAGGCCTTAGAATTCATGAAAGGATCCACAC...GCTTGTGTTACATGGAAGCACAGATGAACTCATCACATGCATGTTACAGGATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| 3UTR CAA 72 bp | ACACACACACACCTACATATACAGGGGAGAGAAGCATaGTATAAGTGCTGTAACTCAAGAGAACCCTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: THTHLHIQGREA*YKCCNSREPCL Trigger: TAAACAGGGTTCTCTTGAGTTACAGCACTTATACAATGCTTCTCTCCCCTGTATATGTAGGTGTGTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | ATGACGCTATCATTCAAGATAGGCACTAACAAAATGAGGGAATTTTCAAGATGGAATTCTGTGGCTCCTTaGTTACACTATAGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MTLSFKIGTNKMREFSRWNSVAP*LHYSQG Trigger: GCCCTGGCTATAGTGTAATCAAGGAGCCACAGAATT...CCATCTTGAAAATTCCCTCATTTTGTTAGTGCCTATCTTGAATGATAGCGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CACATGACGCTATCATTCAAGATAGGCACTAACAAAATGAGGGAATTTTCAAGACACACAGCTTACACTTaGAAGGCTTCTCATCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HMTLSFKIGTNKMREFSRHTAYT*KASHRC Trigger: ACACCGATGAGAAGCCTTTCAAGTGTAAGCTGTGTG...TCTTGAAAATTCCCTCATTTTGTTAGTGCCTATCTTGAATGATAGCGTCATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
||
| CDS-3UTR TCA 90 bp | CACTGTCCTGCTGAGTCACAAATGCATTTTATCTTAATGTTTGGGCAGAGAACAATGCTGATGAAGGTTTaGCTTACAACCAAAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: HCPAESQMHFILMFGQRTMLMKV*LTTKAL Trigger: AAGTGCTTTGGTTGTAAGTCAAACCTTCATCAGCAT...TGTTCTCTGCCCAAACATTAAGATAAAATGCATTTGTGACTCAGCAGGACAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| CDS-3UTR TCA 90 bp | ATGACGCTATCATTCAAGATAGGCACTAACAAAATGAGGGAATTTTCAAGATGGAGACTTCTGATGTCTTaGAAGCATCTGAGGGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: MTLSFKIGTNKMREFSRWRLLMS*KHLRES Trigger: AGACTCCCTCAGATGCTTTCAAGACATCAGAAGTCT...CCATCTTGAAAATTCCCTCATTTTGTTAGTGCCTATCTTGAATGATAGCGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| CDS-3UTR TCA 90 bp | CACATGACGCTATCATTCAAGATAGGCACTAACAAAATGAGGGAATTTTCAAGAAGCAGGGTAGGAAGATaGAAAGACTTTCCACATATA | + |
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Preference number: 4 (lower is better) Translates to: HMTLSFKIGTNKMREFSRSRVGR*KDFPHI Trigger: TATATGTGGAAAGTCTTTTCATCTTCCTACCCTGCT...TCTTGAAAATTCCCTCATTTTGTTAGTGCCTATCTTGAATGATAGCGTCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| 3UTR CAA 72 bp | TGCAACGTCCCATTATTTCATTTAGATAAGTTTGTTTaGTTTGAAACAGGGAACTCAGCATGTAGACTAGGC | + |
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Preference number: 4 (lower is better) Translates to: CNVPLFHLDKFV*FETGNSACRLG Trigger: GCCTAGTCTACATGCTGAGTTCCCTGTTTCAAACAAAACAAACTTATCTAAATGAAATAATGGGACGTTGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136373.8 |
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| 3UTR CAA 72 bp | AAGGTTGTAAATTTATTGCTTATTCAACAACTGACATaGTACAAACACATGGATCCATCTTTCCACATGACC | + |
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Preference number: 4 (lower is better) Translates to: KVVNLLLIQQLT*YKHMDPSFHMT Trigger: GGTCATGTGGAAAGATGGATCCATGTGTTTGTACAATGTCAGTTGTTGAATAAGCAATAAATTTACAACCTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| CDS-3UTR CAA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCACCTGTCTCCAAACCTaGGCTCGGCCTGCCTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFTCLQT*ARPACF Trigger: GAAACAGGCAGGCCGAGCCAAGGTTTGGAGACAGGT...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
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| CDS-3UTR CAA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCAGGTTTGAGCGACGATaGAAGGCTCTTCCACACGCA | + |
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Preference number: 5 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFRFERR*KALPHA Trigger: TGCGTGTGGAAGAGCCTTCAATCGTCGCTCAAACCT...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGAGGGCATCAGATTTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGTTTGAGCGACGATaGAAGGCTCTTCCACACGCA | + |
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Preference number: 5 (lower is better) Translates to: QKRASDFVTDGCEPPCGCRFERR*KALPHA Trigger: TGCGTGTGGAAGAGCCTTCAATCGTCGCTCAAACCT...GCAACCACATGGTGGCTCACAACCATCTGTAACGAAATCTGATGCCCTCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| CDS-3UTR CAA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCCCCACAGACCATGTGTaGAGAACTAGAGTTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFPTDHV*RTRVGH Trigger: ATGGCCAACTCTAGTTCTCAACACATGGTCTGTGGG...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
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| CDS-3UTR CAA 90 bp | TACACTATAGCCAGGGCCATTACTAACACTGACGCCCTGGACGTCCGAAGTTTTCCCACAGACCATGTGTaGAGAACTAGAGTTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: YTIARAITNTDALDVRSFPTDHV*RTRVGH Trigger: ATGGCCAACTCTAGTTCTCAACACATGGTCTGTGGG...AAAACTTCGGACGTCCAGGGCGTCAGTGTTAGTAATGGCCCTGGCTATAGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136373.8 |
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| CDS-3UTR CAA 90 bp | TGTTTCTGGACACGCTGGCAACAAAACATGCCATCTACAATGTGTTCTTACCTCCCCACAGACCATGTGTaGAGAACTAGAGTTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: CFWTRWQQNMPSTMCSYLPTDHV*RTRVGH Trigger: ATGGCCAACTCTAGTTCTCAACACATGGTCTGTGGG...GAGGTAAGAACACATTGTAGATGGCATGTTTTGTTGCCAGCGTGTCCAGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| CDS-3UTR CAA 90 bp | GTACTTATTCACCAACAGCTAGTTTATAGACATCTCTGCACGAAAGCTAAAGAAACCTGTCTCCAAACCTaGGCTCGGCCTGCCTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: VLIHQQLVYRHLCTKAKETCLQT*ARPACF Trigger: GAAACAGGCAGGCCGAGCCAAGGTTTGGAGACAGGT...TTCTTTAGCTTTCGTGCAGAGATGTCTATAAACTAGCTGTTGGTGAATAAGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| CDS-3UTR CAA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCATTAGCATCTCCTTCTaGATAATTCTGTGGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFISISF*IILWLL Trigger: AAGGAGCCACAGAATTATCAAGAAGGAGATGCTAAT...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
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| CDS-3UTR CAA 90 bp | CGACAGCATGGATACTTTTATGCTGAAGGCCTGAGCTTCAGTTGCGGGTCTTTCAAAGTGTCCAAGAAATaGGTAATGATACTGAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: RQHGYFYAEGLSFSCGSFKVSKK*VMILKG Trigger: GCCTTTCAGTATCATTACCAATTTCTTGGACACTTT...GAAAGACCCGCAACTGAAGCTCAGGCCTTCAGCATAAAAGTATCCATGCTGTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 |
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| CDS-3UTR CAA 90 bp | ATGACGCTATCATTCAAGATAGGCACTAACAAAATGAGGGAATTTTCAAGATGGATTAGCATCTCCTTCTaGATAATTCTGTGGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: MTLSFKIGTNKMREFSRWISISF*IILWLL Trigger: AAGGAGCCACAGAATTATCAAGAAGGAGATGCTAAT...CCATCTTGAAAATTCCCTCATTTTGTTAGTGCCTATCTTGAATGATAGCGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| CDS-3UTR CAA 90 bp | GTACTTATTCACCAACAGCTAGTTTATAGACATCTCTGCACGAAAGCTAAAGAAAAAGTGTCCAAGAAATaGGTAATGATACTGAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: VLIHQQLVYRHLCTKAKEKVSKK*VMILKG Trigger: GCCTTTCAGTATCATTACCAATTTCTTGGACACTTT...TTCTTTAGCTTTCGTGCAGAGATGTCTATAAACTAGCTGTTGGTGAATAAGTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108336.8 |
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| CDS GCA 72 bp | CCTGCTCTAGTAAGACGATCAGATCTGGCTTGGGAATaGAACGTCCCACCACTGCGACCAGGTTGCTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: PALVRRSDLAWE*NVPPLRPGCCR Trigger: CCTACAGCAACCTGGTCGCAGTGGTGGGACGTTGCATTCCCAAGCCAGATCTGATCGTCTTACTAGAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042641.14 ENSMUST00000108336.8 ENSMUST00000130997.8 ENSMUST00000167955.2 |
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