Pregenerated sensors for ZFP599 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062794Ensembl transcript IDs: ENSMUST00000086281.5
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCTTTCAGCTTTGTTGACTGCAACAAACTTCTTTCTCTTGGGCTaGTTGCACTCCCTGGTAGCAGCTTTCCTGGGCAGGTATCCCACA | + |
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Preference number: 1 (lower is better) Translates to: LLSALLTATNFFLLG*LHSLVAAFLGRYPT Trigger: TGTGGGATACCTGCCCAGGAAAGCTGCTACCAGGGAGTGCAACCAGCCCAAGAGAAAGAAGTTTGTTGCAGTCAACAAAGCTGAAAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR GCA 90 bp | CTGGACCAAAGCAGGACTGAAAACCAGCTGGCAAACTCCCAACTCTaGATCTCCATGTTTGATATCAAAGTGTTCTTCAGCTCTCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: LDQSRTENQLANSQL*ISMFDIKVFFSSPA Trigger: AGCTGGAGAGCTGAAGAACACTTTGATATCAAACATGGAGATGCAGAGTTGGGAGTTTGCCAGCTGGTTTTCAGTCCTGCTTTGGTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CCA 90 bp | AGCCTAGTGAGAAAAGACTGGACCAAAGCAGGACTGAAAACCAGCTaGCAAACTCCCAACTCTGCATCTCCATGTTTGATATCAAAGTGT | + |
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Preference number: 1 (lower is better) Translates to: SLVRKDWTKAGLKTS*QTPNSASPCLISKC Trigger: ACACTTTGATATCAAACATGGAGATGCAGAGTTGGGAGTTTGCCAGCTGGTTTTCAGTCCTGCTTTGGTCCAGTCTTTTCTCACTAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR GCA 90 bp | AAGCCGACAGCCAACCTGTGTTCTGCTCAAGACAGCTCTCTCTCTTaGTTGAATACAATTTTGAAAATGCTGGATAACTCATCTCTTCGA | + |
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Preference number: 1 (lower is better) Translates to: KPTANLCSAQDSSLS*LNTILKMLDNSSLR Trigger: TCGAAGAGATGAGTTATCCAGCATTTTCAAAATTGTATTCAAGCAAGAGAGAGAGCTGTCTTGAGCAGAACACAGGTTGGCTGTCGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR GCA 90 bp | ACTCAAAGTCAATCATGGGTACAAGCCGACAGCCAACCTGTGTTCTaGTCAAGACAGCTCTCTCTCTTGCTTGAATACAATTTTGAAAAT | + |
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Preference number: 1 (lower is better) Translates to: TQSQSWVQADSQPVF*SRQLSLLLEYNFEN Trigger: ATTTTCAAAATTGTATTCAAGCAAGAGAGAGAGCTGTCTTGAGCAGAACACAGGTTGGCTGTCGGCTTGTACCCATGATTGACTTTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CAA 90 bp | GATCCAGTCCTGAGATTACAATTCCCACCACACCTGGGCCTATCCTaGCTCTGTTCCAGGCTGACCTTGAACTCAGGAGTCTTCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: DPVLRLQFPPHLGLS*LCSRLTLNSGVFLP Trigger: AGGCAGGAAGACTCCTGAGTTCAAGGTCAGCCTGGAACAGAGCAAGGATAGGCCCAGGTGTGGTGGGAATTGTAATCTCAGGACTGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR-3UTR GCA 90 bp | GTTGACTGCAACAAACTTCTTTCTCTTGGGCTGGTTGCACTCCCTGGTAGCAGCCTCTCTGGACTTCCATaGAGGGACAGGGACATGCCT | + |
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Preference number: 2 (lower is better) Translates to: VDCNKLLSLGLVALPGSSLSGLP*RDRDMP Trigger: AGGCATGTCCCTGTCCCTGCATGGAAGTCCAGAGAG...GCTGCTACCAGGGAGTGCAACCAGCCCAAGAGAAAGAAGTTTGTTGCAGTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CAA 90 bp | TTCCCACCACACCTGGGCCTATCCTTGCTCTGTTCCAGGCTGACCTaGAACTCAGGAGTCTTCCTGCCTTTGTATCTTTTTCAACCTGGG | + |
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Preference number: 2 (lower is better) Translates to: FPPHLGLSLLCSRLT*NSGVFLPLYLFQPG Trigger: CCCAGGTTGAAAAAGATACAAAGGCAGGAAGACTCCTGAGTTCAAGGTCAGCCTGGAACAGAGCAAGGATAGGCCCAGGTGTGGTGGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CAA 90 bp | CTTTCAGCTTTGTTGACTGCAACAAACTTCTTTCTCTTGGGCTGGTaGCACTCCCTGGTAGCAGCTTTCCTGGGCAGGTATCCCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: LSALLTATNFFLLGW*HSLVAAFLGRYPTG Trigger: ACCTGTGGGATACCTGCCCAGGAAAGCTGCTACCAGGGAGTGCAACCAGCCCAAGAGAAAGAAGTTTGTTGCAGTCAACAAAGCTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CAA 90 bp | CTCCAGCTCCTTTCAGCTTTGTTGACTGCAACAAACTTCTTTCTCTaGGGCTGGTTGCACTCCCTGGTAGCAGCTTTCCTGGGCAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: LQLLSALLTATNFFL*GWLHSLVAAFLGRY Trigger: ATACCTGCCCAGGAAAGCTGCTACCAGGGAGTGCAACCAGCCCAAGAGAAAGAAGTTTGTTGCAGTCAACAAAGCTGAAAGGAGCTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR-3UTR GCA 90 bp | CTGGACTTCCATGCAGGGACAGGGACATGCCTAGCCTCAGCAACCTTCTTCAGCGACAGCTCTCTCTCTTaGTTGAATACAATTTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LDFHAGTGTCLASATFFSDSSLS*LNTILK Trigger: TTTCAAAATTGTATTCAAGCAAGAGAGAGAGCTGTC...GCTGAAGAAGGTTGCTGAGGCTAGGCATGTCCCTGTCCCTGCATGGAAGTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CAA 90 bp | TTGATATCAAAGTGTTCTTCAGCTCTCCAGCTCCTTTCAGCTTTGTaGACTGCAACAAACTTCTTTCTCTTGGGCTGGTTGCACTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: LISKCSSALQLLSAL*TATNFFLLGWLHSL Trigger: CAGGGAGTGCAACCAGCCCAAGAGAAAGAAGTTTGTTGCAGTCAACAAAGCTGAAAGGAGCTGGAGAGCTGAAGAACACTTTGATATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CAA 90 bp | CCGACAGCCAACCTGTGTTCTGCTCAAGACAGCTCTCTCTCTTGCTaGAATACAATTTTGAAAATGCTGGATAACTCATCTCTTCGACCT | + |
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Preference number: 2 (lower is better) Translates to: PTANLCSAQDSSLSC*NTILKMLDNSSLRP Trigger: AGGTCGAAGAGATGAGTTATCCAGCATTTTCAAAATTGTATTCAAGCAAGAGAGAGAGCTGTCTTGAGCAGAACACAGGTTGGCTGTCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR-3UTR CCA 90 bp | GCAACCTTCTTCAGCTGCAGAGGGAGATTCAAGGATGTTGAATTACCTGGAGCTATAACTTTAGTTGGGTaGGATCCAGTCCTGAGATTA | + |
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Preference number: 2 (lower is better) Translates to: ATFFSCRGRFKDVELPGAITLVG*DPVLRL Trigger: TAATCTCAGGACTGGATCCCACCCAACTAAAGTTAT...AGCTCCAGGTAATTCAACATCCTTGAATCTCCCTCTGCAGCTGAAGAAGGTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGATGGCTTTGAATTCATTCTCCTGCCTTAACTTCCCAATAGAGATCATGCCCCAGGTTCACTTTTaGTTATCCCATGAATCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LRMALNSFSCLNFPIEIMPQVHF*LSHESA Trigger: TGCTGATTCATGGGATAATCAAAAGTGAACCTGGGG...CATGATCTCTATTGGGAAGTTAAGGCAGGAGAATGAATTCAAAGCCATCCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR GCA 72 bp | ATAGCCTCTCTGGACTTCCATGCAGGGACAGGGACATaGCTAGCCTCAGCAACCTTCTTCAGCTGCAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: IASLDFHAGTGT*LASATFFSCRG Trigger: CCCTCTGCAGCTGAAGAAGGTTGCTGAGGCTAGGCATGTCCCTGTCCCTGCATGGAAGTCCAGAGAGGCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CCA 72 bp | GCTTTGTTGACTGCAACAAACTTCTTTCTCTTGGGCTaGTTGCACTCCCTGGTAGCAGCTTTCCTGGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: ALLTATNFFLLG*LHSLVAAFLGR Trigger: CCTGCCCAGGAAAGCTGCTACCAGGGAGTGCAACCAGCCCAAGAGAAAGAAGTTTGTTGCAGTCAACAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR-3UTR CAA 90 bp | GTTGACTGCAACAAACTTCTTTCTCTTGGGCTGGTTGCACTCCCTGGTAGCAGCCCTGACTCCAGCCCCTaGATTCTTAGAAAGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: VDCNKLLSLGLVALPGSSPDSSP*ILRKRQ Trigger: CTGTCTCTTTCTAAGAATCAAGGGGCTGGAGTCAGG...GCTGCTACCAGGGAGTGCAACCAGCCCAAGAGAAAGAAGTTTGTTGCAGTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR GCA 72 bp | ACAGGGACATGCCTAGCCTCAGCAACCTTCTTCAGCTaGAGAGGGAGATTCAAGGATGTTGAATTACCTGGA | + |
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Preference number: 3 (lower is better) Translates to: TGTCLASATFFS*RGRFKDVELPG Trigger: TCCAGGTAATTCAACATCCTTGAATCTCCCTCTGCAGCTGAAGAAGGTTGCTGAGGCTAGGCATGTCCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR GCA 72 bp | TTCACAATTTCATACAATAGCCTCTCTGGACTTCCATaGAGGGACAGGGACATGCCTAGCCTCAGCAACCTT | + |
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Preference number: 3 (lower is better) Translates to: FTISYNSLSGLP*RDRDMPSLSNL Trigger: AAGGTTGCTGAGGCTAGGCATGTCCCTGTCCCTGCATGGAAGTCCAGAGAGGCTATTGTATGAAATTGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR-3UTR CAA 90 bp | ACTGAAAACCAGCTGGCAAACTCCCAACTCTGCATCTCCATGTTTGATATCAAATGTTCCAGGCTGACCTaGAACTCAGGAGTCTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: TENQLANSQLCISMFDIKCSRLT*NSGVFL Trigger: CAGGAAGACTCCTGAGTTCAAGGTCAGCCTGGAACA...TTTGATATCAAACATGGAGATGCAGAGTTGGGAGTTTGCCAGCTGGTTTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR TCA 72 bp | AGTGTTCTTCAGCTCTCCAGCTCCTTTCAGCTTTGTTaGCTGCAACAAACTTCTTTCTCTTGGGCTGGTTGC | + |
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Preference number: 3 (lower is better) Translates to: SVLQLSSSFQLC*LQQTSFSWAGC Trigger: GCAACCAGCCCAAGAGAAAGAAGTTTGTTGCAGTCAACAAAGCTGAAAGGAGCTGGAGAGCTGAAGAACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR TCA 72 bp | CCAGCTGGCAAACTCCCAACTCTGCATCTCCATGTTTaGTATCAAAGTGTTCTTCAGCTCTCCAGCTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: PAGKLPTLHLHV*YQSVLQLSSSF Trigger: AAAGGAGCTGGAGAGCTGAAGAACACTTTGATATCAAACATGGAGATGCAGAGTTGGGAGTTTGCCAGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR GCA 72 bp | CAATCATGGGTACAAGCCGACAGCCAACCTGTGTTCTaGTCAAGACAGCTCTCTCTCTTGCTTGAATACAAT | + |
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Preference number: 3 (lower is better) Translates to: QSWVQADSQPVF*SRQLSLLLEYN Trigger: ATTGTATTCAAGCAAGAGAGAGAGCTGTCTTGAGCAGAACACAGGTTGGCTGTCGGCTTGTACCCATGATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR-3UTR CAA 90 bp | TCAAAGTGTTCTTCAGCTCTCCAGCTCCTTTCAGCTTTGTTGACTGCAACAAACGGCTCTTCCTCTGAGTaGTCCTCTGCTGTTATTTGT | + |
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Preference number: 3 (lower is better) Translates to: SKCSSALQLLSALLTATNGSSSE*SSAVIC Trigger: ACAAATAACAGCAGAGGACAACTCAGAGGAAGAGCC...GTTTGTTGCAGTCAACAAAGCTGAAAGGAGCTGGAGAGCTGAAGAACACTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR GCA 72 bp | AGCAGGACTGAAAACCAGCTGGCAAACTCCCAACTCTaGATCTCCATGTTTGATATCAAAGTGTTCTTCAGC | + |
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Preference number: 3 (lower is better) Translates to: SRTENQLANSQL*ISMFDIKVFFS Trigger: GCTGAAGAACACTTTGATATCAAACATGGAGATGCAGAGTTGGGAGTTTGCCAGCTGGTTTTCAGTCCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CCA 72 bp | AGAAAAGACTGGACCAAAGCAGGACTGAAAACCAGCTaGCAAACTCCCAACTCTGCATCTCCATGTTTGATA | + |
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Preference number: 3 (lower is better) Translates to: RKDWTKAGLKTS*QTPNSASPCLI Trigger: TATCAAACATGGAGATGCAGAGTTGGGAGTTTGCCAGCTGGTTTTCAGTCCTGCTTTGGTCCAGTCTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR TCA 72 bp | TATCCCATGAATCAGCATCCCCTGACTCCAGCCCCTTaGTTCTTAGAAAGAGACAGCAAACACCTTTATCTT | + |
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Preference number: 3 (lower is better) Translates to: YPMNQHPLTPAP*FLERDSKHLYL Trigger: AAGATAAAGGTGTTTGCTGTCTCTTTCTAAGAATCAAGGGGCTGGAGTCAGGGGATGCTGATTCATGGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR GCA 72 bp | GCCATGTGGCTGAGGATGGCTTTGAATTCATTCTCCTaGCTTAACTTCCCAATAGAGATCATGATTATCAAA | + |
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Preference number: 3 (lower is better) Translates to: AMWLRMALNSFS*LNFPIEIMIIK Trigger: TTTGATAATCATGATCTCTATTGGGAAGTTAAGGCAGGAGAATGAATTCAAAGCCATCCTCAGCCACATGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CCA 72 bp | ATTTTTATTTCATGTGTTATGAGTATTTTACCAGCATaGATATCTGTGGACCACACGTGTACATTGCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: IFISCVMSILPA*ISVDHTCTLLS Trigger: TGACAGCAATGTACACGTGTGGTCCACAGATATCCATGCTGGTAAAATACTCATAACACATGAAATAAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CAA 72 bp | CTGAGATTACAATTCCCACCACACCTGGGCCTATCCTaGCTCTGTTCCAGGCTGACCTTGAACTCAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: LRLQFPPHLGLS*LCSRLTLNSGV Trigger: GACTCCTGAGTTCAAGGTCAGCCTGGAACAGAGCAAGGATAGGCCCAGGTGTGGTGGGAATTGTAATCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR TCA 90 bp | TCATACAATAGCCTCTCTGGACTTCCATGCAGGGACAGGGACATGCCTAGCCTCGGTCTATCACCTGTGTaGGTTCTTCCATGGACAATG | + |
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Preference number: 4 (lower is better) Translates to: SYNSLSGLPCRDRDMPSLGLSPV*VLPWTM Trigger: CATTGTCCATGGAAGAACTCACACAGGTGATAGACC...GAGGCTAGGCATGTCCCTGTCCCTGCATGGAAGTCCAGAGAGGCTATTGTATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR GCA 90 bp | GTCCTGAGATTACAATTCCCACCACACCTGGGCCTATCCTTGCTCTGTTCCAGGCCCACAGTCTGTGCATaGATAAGACTTCTCACCTAC | + |
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Preference number: 4 (lower is better) Translates to: VLRLQFPPHLGLSLLCSRPTVCA*IRLLTY Trigger: GTAGGTGAGAAGTCTTATGCATGCACAGACTGTGGG...CCTGGAACAGAGCAAGGATAGGCCCAGGTGTGGTGGGAATTGTAATCTCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR GCA 90 bp | CCCACCACACCTGGGCCTATCCTTGCTCTGTTCCAGGCTGACCTTGAACTCAGGTCTTTTCCTTCAAAATaGTTGGCGCATGCTTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: PTTPGPILALFQADLELRSFPSK*LAHACV Trigger: AACACAAGCATGCGCCAAGCATTTTGAAGGAAAAGA...CCTGAGTTCAAGGTCAGCCTGGAACAGAGCAAGGATAGGCCCAGGTGTGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR GCA 90 bp | TCATACAATAGCCTCTCTGGACTTCCATGCAGGGACAGGGACATGCCTAGCCTCGGAAGATGGTTTTCCTaGATTCTTCATACTCACGGC | + |
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Preference number: 4 (lower is better) Translates to: SYNSLSGLPCRDRDMPSLGRWFS*ILHTHG Trigger: GCCGTGAGTATGAAGAATGCAGGAAAACCATCTTCC...GAGGCTAGGCATGTCCCTGTCCCTGCATGGAAGTCCAGAGAGGCTATTGTATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CAA 72 bp | TTGTTGACTGCAACAAACTTCTTTCTCTTGGGCTGGTaGCACTCCCTGGTAGCAGCTTTCCTGGGCAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: LLTATNFFLLGW*HSLVAAFLGRY Trigger: ATACCTGCCCAGGAAAGCTGCTACCAGGGAGTGCAACCAGCCCAAGAGAAAGAAGTTTGTTGCAGTCAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR TCA 90 bp | TCATACAATAGCCTCTCTGGACTTCCATGCAGGGACAGGGACATGCCTAGCCTCTCTGTATGGACAGTCTaGTGTAGAGTGAGATGTGAT | + |
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Preference number: 4 (lower is better) Translates to: SYNSLSGLPCRDRDMPSLSVWTV*CRVRCD Trigger: ATCACATCTCACTCTACATCAGACTGTCCATACAGA...GAGGCTAGGCATGTCCCTGTCCCTGCATGGAAGTCCAGAGAGGCTATTGTATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR GCA 90 bp | TCTTCCCATTCACAGGGCTCTTCCTCTGAGTTGTCCTCTGCTGTTATTTGTGGCCATGGCCCGAGTCCTTaGTCCAACTTGAAGATTAAC | + |
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Preference number: 4 (lower is better) Translates to: SSHSQGSSSELSSAVICGHGPSP*SNLKIN Trigger: GTTAATCTTCAAGTTGGAGCAAGGACTCGGGCCATG...GCCACAAATAACAGCAGAGGACAACTCAGAGGAAGAGCCCTGTGAATGGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CAA 72 bp | CTTTCAGCTTTGTTGACTGCAACAAACTTCTTTCTCTaGGGCTGGTTGCACTCCCTGGTAGCAGCTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LSALLTATNFFL*GWLHSLVAAFL Trigger: CAGGAAAGCTGCTACCAGGGAGTGCAACCAGCCCAAGAGAAAGAAGTTTGTTGCAGTCAACAAAGCTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR TCA 90 bp | TCTTCCCATTCACAGGGCTCTTCCTCTGAGTTGTCCTCTGCTGTTATTTGTGGCTCTTTCGCAGGATTTTaGCCCTTGATGGATCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSHSQGSSSELSSAVICGSFAGF*PLMDLL Trigger: CAGAAGATCCATCAAGGGTCAAAATCCTGCGAAAGA...GCCACAAATAACAGCAGAGGACAACTCAGAGGAAGAGCCCTGTGAATGGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR TCA 90 bp | GCAACCTTCTTCAGCTGCAGAGGGAGATTCAAGGATGTTGAATTACCTGGAGCTAGAGTAAGTTTTCCCTaGGAGCAGAAGGCTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: ATFFSCRGRFKDVELPGARVSFP*EQKAFP Trigger: TGGGAAAGCCTTCTGCTCTCAGGGAAAACTTACTCT...AGCTCCAGGTAATTCAACATCCTTGAATCTCCCTCTGCAGCTGAAGAAGGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR GCA 90 bp | GGATCCAGTCCTGAGATTACAATTCCCACCACACCTGGGCCTATCCTTGCTCTGAGCTTGCCACATATATaGCTTGTGATTTTTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: GSSPEITIPTTPGPILALSLPHI*LVIFLA Trigger: AGCCAGAAAAATCACAAGGCATATATGTGGCAAGCT...CAGAGCAAGGATAGGCCCAGGTGTGGTGGGAATTGTAATCTCAGGACTGGATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR GCA 90 bp | GGATCCAGTCCTGAGATTACAATTCCCACCACACCTGGGCCTATCCTTGCTCTGAAATGTCTTCCCATGTaGTTCTCTTTCGCAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: GSSPEITIPTTPGPILALKCLPM*FSFAGF Trigger: AAATCCTGCGAAAGAGAAGCACATGGGAAGACATTT...CAGAGCAAGGATAGGCCCAGGTGTGGTGGGAATTGTAATCTCAGGACTGGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR TCA 90 bp | GTCCTGAGATTACAATTCCCACCACACCTGGGCCTATCCTTGCTCTGTTCCAGGTTCTTCCATGGACAATaGGTTGTGACTTATAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: VLRLQFPPHLGLSLLCSRFFHGQ*VVTYSR Trigger: TCTACTATAAGTCACAACTCATTGTCCATGGAAGAA...CCTGGAACAGAGCAAGGATAGGCCCAGGTGTGGTGGGAATTGTAATCTCAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR GCA 90 bp | GTTGACTGCAACAAACTTCTTTCTCTTGGGCTGGTTGCACTCCCTGGTAGCAGCGCTGGTCACAATTGGTaGAGTCAATATGTGAAAATC | + |
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Preference number: 4 (lower is better) Translates to: VDCNKLLSLGLVALPGSSAGHNW*SQYVKI Trigger: GATTTTCACATATTGACTGCACCAATTGTGACCAGC...GCTGCTACCAGGGAGTGCAACCAGCCCAAGAGAAAGAAGTTTGTTGCAGTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR GCA 90 bp | CAACCTTCTTCAGCTGCAGAGGGAGATTCAAGGATGTTGAATTACCTGGAGCTACTTCCCCACAGTCTGTaGATGCATAAGACTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: QPSSAAEGDSRMLNYLELLPHSL*MHKTSH Trigger: GTGAGAAGTCTTATGCATGCACAGACTGTGGGGAAG...TAGCTCCAGGTAATTCAACATCCTTGAATCTCCCTCTGCAGCTGAAGAAGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR TCA 90 bp | CAACCTTCTTCAGCTGCAGAGGGAGATTCAAGGATGTTGAATTACCTGGAGCTAGGTGCAGTCAATATGTaGAAATCTGAGAGGTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QPSSAAEGDSRMLNYLELGAVNM*KSERFL Trigger: CAGGAACCTCTCAGATTTTCACATATTGACTGCACC...TAGCTCCAGGTAATTCAACATCCTTGAATCTCCCTCTGCAGCTGAAGAAGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR CCA 90 bp | GCAACCTTCTTCAGCTGCAGAGGGAGATTCAAGGATGTTGAATTACCTGGAGCTGGAACGTGTGAGTTATaGAAGATGGTTTTCCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: ATFFSCRGRFKDVELPGAGTCEL*KMVFLH Trigger: ATGCAGGAAAACCATCTTCCATAACTCACACGTTCC...AGCTCCAGGTAATTCAACATCCTTGAATCTCCCTCTGCAGCTGAAGAAGGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR CCA 90 bp | ACTCAGGAGTCTTCCTGCCTTTGTATCTTTTTCAACCTGGGTCATAGCGCAGCTAGTCTGGTCTTACAGTaGAAACCTTTCCCACATTTG | + |
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Preference number: 4 (lower is better) Translates to: TQESSCLCIFFNLGHSAASLVLQ*KPFPHL Trigger: CAAATGTGGGAAAGGTTTCCACTGTAAGACCAGACT...AGCTGCGCTATGACCCAGGTTGAAAAAGATACAAAGGCAGGAAGACTCCTGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CAA 72 bp | AAGTGTTCTTCAGCTCTCCAGCTCCTTTCAGCTTTGTaGACTGCAACAAACTTCTTTCTCTTGGGCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: KCSSALQLLSAL*TATNFFLLGWL Trigger: CAACCAGCCCAAGAGAAAGAAGTTTGTTGCAGTCAACAAAGCTGAAAGGAGCTGGAGAGCTGAAGAACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR CCA 90 bp | AGGAGTCTTCCTGCCTTTGTATCTTTTTCAACCTGGGTCATAGCGCAGCTGCTGGTGAGTTATGGAAGATaGTTTTCCTGCATTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: RSLPAFVSFSTWVIAQLLVSYGR*FSCILH Trigger: ATGAAGAATGCAGGAAAACCATCTTCCATAACTCAC...CAGCAGCTGCGCTATGACCCAGGTTGAAAAAGATACAAAGGCAGGAAGACTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CAA 72 bp | TTATCCCATGAATCAGCATCCCCTGACTCCAGCCCCTaGATTCTTAGAAAGAGACAGCAAACACCTTTATCT | + |
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Preference number: 4 (lower is better) Translates to: LSHESASPDSSP*ILRKRQQTPLS Trigger: AGATAAAGGTGTTTGCTGTCTCTTTCTAAGAATCAAGGGGCTGGAGTCAGGGGATGCTGATTCATGGGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR TCA 90 bp | GCAACCTTCTTCAGCTGCAGAGGGAGATTCAAGGATGTTGAATTACCTGGAGCTTGCAATCTTTTCATTTaGTGCCTTATTTTCGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: ATFFSCRGRFKDVELPGACNLFI*CLIFGG Trigger: ACCACCGAAAATAAGGCATCAAATGAAAAGATTGCA...AGCTCCAGGTAATTCAACATCCTTGAATCTCCCTCTGCAGCTGAAGAAGGTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR TCA 90 bp | ATTTCATGTGTTATGAGTATTTTACCAGCATGGATATCTGTGGACCACACGTGTCGTGTAGGAGACATTTaGATCACAGTGCTCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ISCVMSILPAWISVDHTCRVGDI*ITVLWA Trigger: AGCCCAGAGCACTGTGATTCAAATGTCTCCTACACG...ACACGTGTGGTCCACAGATATCCATGCTGGTAAAATACTCATAACACATGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR TCA 90 bp | ACTCCCAACTCTGCATCTCCATGTTTGATATCAAAGTGTTCTTCAGCTCTCCAGTCTATAAGAGTTTTCTaGCATCCTGGAACGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: TPNSASPCLISKCSSALQSIRVF*HPGTCE Trigger: CTCACACGTTCCAGGATGTCAGAAAACTCTTATAGA...CTGGAGAGCTGAAGAACACTTTGATATCAAACATGGAGATGCAGAGTTGGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR TCA 90 bp | CTGAGGATGGCTTTGAATTCATTCTCCTGCCTTAACTTCCCAATAGAGATCATGCATGCTTGTGTTCACTaGGGTAAAGTGAGTGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: LRMALNSFSCLNFPIEIMHACVH*GKVSEC Trigger: ACACTCACTCACTTTACCTCAGTGAACACAAGCATG...CATGATCTCTATTGGGAAGTTAAGGCAGGAGAATGAATTCAAAGCCATCCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR TCA 90 bp | ACTCCCAACTCTGCATCTCCATGTTTGATATCAAAGTGTTCTTCAGCTCTCCAGTTCTTGGATGACTTGTaGGTTTTGAGTTGCAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: TPNSASPCLISKCSSALQFLDDL*VLSCKR Trigger: TCTCTTGCAACTCAAAACTCACAAGTCATCCAAGAA...CTGGAGAGCTGAAGAACACTTTGATATCAAACATGGAGATGCAGAGTTGGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR GCA 90 bp | TCAAAGTGTTCTTCAGCTCTCCAGCTCCTTTCAGCTTTGTTGACTGCAACAAACACATTTGAATCACAGTaGTCTGGGCTTTCTGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: SKCSSALQLLSALLTATNTFESQ*SGLSEK Trigger: TTTTTCAGAAAGCCCAGAGCACTGTGATTCAAATGT...GTTTGTTGCAGTCAACAAAGCTGAAAGGAGCTGGAGAGCTGAAGAACACTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR TCA 90 bp | CAAAGTTCAAAGTCTCTTCTGAGGTTTGTACAACCTCTTAATTGTAATCCCCTAGTGCTCTGGGCTTTCTaGAAAAATGTCTTCCCATGT | + |
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Preference number: 4 (lower is better) Translates to: QSSKSLLRFVQPLNCNPLVLWAF*KNVFPC Trigger: ACATGGGAAGACATTTTTTCAGAAAGCCCAGAGCAC...TAGGGGATTACAATTAAGAGGTTGTACAAACCTCAGAAGAGACTTTGAACTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR CCA 90 bp | CTGAGGATGGCTTTGAATTCATTCTCCTGCCTTAACTTCCCAATAGAGATCATGCTCTGTACATATATATaGGTGTTCATCTGTATGGAC | + |
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Preference number: 4 (lower is better) Translates to: LRMALNSFSCLNFPIEIMLCTYI*VFICMD Trigger: GTCCATACAGATGAACACCCATATATATGTACAGAG...CATGATCTCTATTGGGAAGTTAAGGCAGGAGAATGAATTCAAAGCCATCCTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR GCA 90 bp | CTGAGGATGGCTTTGAATTCATTCTCCTGCCTTAACTTCCCAATAGAGATCATGAAGAGAAATCTTTTCTaGACTCTGTACATCCACAAA | + |
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Preference number: 4 (lower is better) Translates to: LRMALNSFSCLNFPIEIMKRNLF*TLYIHK Trigger: TTTGTGGATGTACAGAGTGCAGAAAAGATTTCTCTT...CATGATCTCTATTGGGAAGTTAAGGCAGGAGAATGAATTCAAAGCCATCCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR GCA 90 bp | ACTGAAAACCAGCTGGCAAACTCCCAACTCTGCATCTCCATGTTTGATATCAAAATGCATAAGGCTTCTTaGTCATGTGAATTTTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: TENQLANSQLCISMFDIKMHKAS*SCEFSD Trigger: ATCAGAAAATTCACATGAGCAAGAAGCCTTATGCAT...TTTGATATCAAACATGGAGATGCAGAGTTGGGAGTTTGCCAGCTGGTTTTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CAA 72 bp | AACCTGTGTTCTGCTCAAGACAGCTCTCTCTCTTGCTaGAATACAATTTTGAAAATGCTGGATAACTCATCT | + |
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Preference number: 4 (lower is better) Translates to: NLCSAQDSSLSC*NTILKMLDNSS Trigger: AGATGAGTTATCCAGCATTTTCAAAATTGTATTCAAGCAAGAGAGAGAGCTGTCTTGAGCAGAACACAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| 3UTR CAA 72 bp | TCTTTCTTCATTGCAAATGAATTCAGAGATCTGTCTTaGTTAAACACAGACAATAACTTTAGTTGGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SFFIANEFRDLS*LNTDNNFSWVG Trigger: TCCCACCCAACTAAAGTTATTGTCTGTGTTTAACAAAGACAGATCTCTGAATTCATTTGCAATGAAGAAAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR CAA 90 bp | CCCACCACACCTGGGCCTATCCTTGCTCTGTTCCAGGCTGACCTTGAACTCAGGAAGATTAACTCAGGTTaGTTCATACAGTGCCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: PTTPGPILALFQADLELRKINSG*FIQCPR Trigger: CCTAGGGCACTGTATGAACAAACCTGAGTTAATCTT...CCTGAGTTCAAGGTCAGCCTGGAACAGAGCAAGGATAGGCCCAGGTGTGGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR CAA 90 bp | CCCACCACACCTGGGCCTATCCTTGCTCTGTTCCAGGCTGACCTTGAACTCAGGCTGCAATCTTTTCATTaGATGCCTTATTTTCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: PTTPGPILALFQADLELRLQSFH*MPYFRW Trigger: CCACCGAAAATAAGGCATCAAATGAAAAGATTGCAG...CCTGAGTTCAAGGTCAGCCTGGAACAGAGCAAGGATAGGCCCAGGTGTGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR CAA 90 bp | GCAACCTTCTTCAGCTGCAGAGGGAGATTCAAGGATGTTGAATTACCTGGAGCTACCTGTGTGGGATCGTaGATGCACAGTGAGGTCCGA | + |
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Preference number: 5 (lower is better) Translates to: ATFFSCRGRFKDVELPGATCVGS*MHSEVR Trigger: TCGGACCTCACTGTGCATCAACGATCCCACACAGGT...AGCTCCAGGTAATTCAACATCCTTGAATCTCCCTCTGCAGCTGAAGAAGGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS GCA 90 bp | ACGGCTCATCTTCCCTCTGTGAGGTCTCTGACCTTTAGTGAGAGTTaGCGTGTAATGGAGAGCTGTCTGACGTGTAGGAGACATTTGAAT | + |
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Preference number: 5 (lower is better) Translates to: TAHLPSVRSLTFSES*RVMESCLTCRRHLN Trigger: ATTCAAATGTCTCCTACACGTCAGACAGCTCTCCATTACACGGCAACTCTCACTAAAGGTCAGAGACCTCACAGAGGGAAGATGAGCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR CAA 90 bp | TCTTCCCATTCACAGGGCTCTTCCTCTGAGTTGTCCTCTGCTGTTATTTGTGGCCTCTTTCGCAGGATTTaGACCCTTGATGGATCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SSHSQGSSSELSSAVICGLFRRI*TLDGSS Trigger: AGAAGATCCATCAAGGGTCAAAATCCTGCGAAAGAG...GCCACAAATAACAGCAGAGGACAACTCAGAGGAAGAGCCCTGTGAATGGGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR CAA 90 bp | ACTCAGGAGTCTTCCTGCCTTTGTATCTTTTTCAACCTGGGTCATAGCGCAGCTTCTGGCTGGTCACAATaGGTGCAGTCAATATGTGAA | + |
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Preference number: 5 (lower is better) Translates to: TQESSCLCIFFNLGHSAASGWSQ*VQSICE Trigger: TTCACATATTGACTGCACCAATTGTGACCAGCCAGA...AGCTGCGCTATGACCCAGGTTGAAAAAGATACAAAGGCAGGAAGACTCCTGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR CAA 90 bp | GCAACCTTCTTCAGCTGCAGAGGGAGATTCAAGGATGTTGAATTACCTGGAGCTTTTCCTTCAAAATGCTaGGCGCATGCTTGTGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: ATFFSCRGRFKDVELPGAFPSKC*AHACVH Trigger: GTGAACACAAGCATGCGCCAAGCATTTTGAAGGAAA...AGCTCCAGGTAATTCAACATCCTTGAATCTCCCTCTGCAGCTGAAGAAGGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS TCA 90 bp | CTGCATTCTTTTCCTTCAAAATGCTTGGCGCATGCTTGTGTTCACTaGGGTAAAGTGAGTGAGTGTGAAGTGAGTCTGGTCTTACAGTGG | + |
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Preference number: 5 (lower is better) Translates to: LHSFPSKCLAHACVH*GKVSECEVSLVLQW Trigger: CCACTGTAAGACCAGACTCACTTCACACTCACTCACTTTACCTCAGTGAACACAAGCATGCGCCAAGCATTTTGAAGGAAAAGAATGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR CAA 90 bp | CAACCTTCTTCAGCTGCAGAGGGAGATTCAAGGATGTTGAATTACCTGGAGCTAGCAGGAGAAAGATTTTaGGCATTCTGTACAGTCATA | + |
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Preference number: 5 (lower is better) Translates to: QPSSAAEGDSRMLNYLELAGERF*AFCTVI Trigger: TATGACTGTACAGAATGCCAAAAATCTTTCTCCTGC...TAGCTCCAGGTAATTCAACATCCTTGAATCTCCCTCTGCAGCTGAAGAAGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR CAA 90 bp | CTCATCTCTTCGACCTATCTTTTATTTACATATCAGTTCAATCATTTACCCCAGACGTGTAGGAGACATTaGAATCACAGTGCTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: LISSTYLLFTYQFNHLPQTCRRH*NHSALG Trigger: GCCCAGAGCACTGTGATTCAAATGTCTCCTACACGT...CTGGGGTAAATGATTGAACTGATATGTAAATAAAAGATAGGTCGAAGAGATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS-3UTR CAA 90 bp | ATTTCATGTGTTATGAGTATTTTACCAGCATGGATATCTGTGGACCACACGTGTCTTGTGAGTTTTGAGTaGCAAGAGAAATCTTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: ISCVMSILPAWISVDHTCLVSFE*QEKSFL Trigger: CAGAAAAGATTTCTCTTGCAACTCAAAACTCACAAG...ACACGTGTGGTCCACAGATATCCATGCTGGTAAAATACTCATAACACATGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS TCA 72 bp | TTTTTCTGGCTGGTCACAATTGGTGCAGTCAATATGTaGAAATCTGAGAGGTTCCTGTCTGAGGCTTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: FFWLVTIGAVNM*KSERFLSEASA Trigger: CGCAGAAGCCTCAGACAGGAACCTCTCAGATTTTCACATATTGACTGCACCAATTGTGACCAGCCAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS TCA 72 bp | TTCCCATGTGCTTCTCTTTCGCAGGATTTTGACCCTTaGTGGATCTTCTGTTGCTCCTTTAGCTCTGCAATC | + |
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Preference number: 6 (lower is better) Translates to: FPCASLSQDFDP*WIFCCSFSSAI Trigger: GATTGCAGAGCTAAAGGAGCAACAGAAGATCCATCAAGGGTCAAAATCCTGCGAAAGAGAAGCACATGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS TCA 72 bp | TTTCCTTCAAAATGCTTGGCGCATGCTTGTGTTCACTaGGGTAAAGTGAGTGAGTGTGAAGTGAGTCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: FPSKCLAHACVH*GKVSECEVSLV Trigger: GACCAGACTCACTTCACACTCACTCACTTTACCTCAGTGAACACAAGCATGCGCCAAGCATTTTGAAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS GCA 72 bp | ATCCTGGAACGTGTGAGTTATGGAAGATGGTTTTCCTaGATTCTTCATACTCACGGCTCATCTTCCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: ILERVSYGRWFS*ILHTHGSSSLC Trigger: ACAGAGGGAAGATGAGCCGTGAGTATGAAGAATGCAGGAAAACCATCTTCCATAACTCACACGTTCCAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS GCA 72 bp | TGCCTTATTTTCGGTGGTTCTAGCTTGCCACATATATaGCTTGTGATTTTTCTGGCTGGTCACAATTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: CLIFGGSSLPHI*LVIFLAGHNWC Trigger: GCACCAATTGTGACCAGCCAGAAAAATCACAAGGCATATATGTGGCAAGCTAGAACCACCGAAAATAAGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS TCA 72 bp | TTTTCGGTGGTTCTAGCTTGCCACATATATGCCTTGTaGTTTTTCTGGCTGGTCACAATTGGTGCAGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: FSVVLACHIYAL*FFWLVTIGAVN Trigger: ATTGACTGCACCAATTGTGACCAGCCAGAAAAATCACAAGGCATATATGTGGCAAGCTAGAACCACCGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS TCA 72 bp | AGGGCCTCTTACGTATGCGAGTTCTTGGATGACTTGTaGGTTTTGAGTTGCAAGAGAAATCTTTTCTGCACT | + |
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Preference number: 6 (lower is better) Translates to: RASYVCEFLDDL*VLSCKRNLFCT Trigger: AGTGCAGAAAAGATTTCTCTTGCAACTCAAAACTCACAAGTCATCCAAGAACTCGCATACGTAAGAGGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS CCA 72 bp | TTTTCTGACATCCTGGAACGTGTGAGTTATGGAAGATaGTTTTCCTGCATTCTTCATACTCACGGCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: FSDILERVSYGR*FSCILHTHGSS Trigger: AGATGAGCCGTGAGTATGAAGAATGCAGGAAAACCATCTTCCATAACTCACACGTTCCAGGATGTCAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS CAA 72 bp | AAAATGTCTTCCCATGTGCTTCTCTTTCGCAGGATTTaGACCCTTGATGGATCTTCTGTTGCTCCTTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: KMSSHVLLFRRI*TLDGSSVAPLA Trigger: AGCTAAAGGAGCAACAGAAGATCCATCAAGGGTCAAAATCCTGCGAAAGAGAAGCACATGGGAAGACATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS TCA 72 bp | GTACATCCACAAAGCTTTGTATCTATAAGAGTTTTCTaGCATCCTGGAACGTGTGAGTTATGGAAGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: VHPQSFVSIRVF*HPGTCELWKMV Trigger: AACCATCTTCCATAACTCACACGTTCCAGGATGTCAGAAAACTCTTATAGATACAAAGCTTTGTGGATGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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| CDS TCA 72 bp | TGTATCTATAAGAGTTTTCTGACATCCTGGAACGTGTaGGTTATGGAAGATGGTTTTCCTGCATTCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: CIYKSFLTSWNV*VMEDGFPAFFI Trigger: TATGAAGAATGCAGGAAAACCATCTTCCATAACTCACACGTTCCAGGATGTCAGAAAACTCTTATAGATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086281.5 |
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