RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP598 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041130

Ensembl transcript IDs: ENSMUST00000047179.7, ENSMUST00000234956.2

Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACGGTGCACAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTaGCTAACCAGGAGGCCTGGCCTTCGGCCTTCCCAGGGCCCTACC +
Preference number: 1 (lower is better)
Translates to: DGAQGRPFLMSTWQA*LTRRPGLRPSQGPT
Trigger: GGTAGGGCCCTGGGAAGGCCGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTGTGCACCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
3UTR CCA 90 bp CTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATaGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTA +
Preference number: 1 (lower is better)
Translates to: LTPAPVDPKLSALGL*TCLTRTLFRPLRPL
Trigger: TAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
3UTR-3UTR CCA 90 bp CATCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTCCAGGGCCAAGCAGCTaGGAAGAGGGAGGAAGGAGA +
Preference number: 2 (lower is better)
Translates to: HLTPAPVDPKLSALGLWTPGPSS*EEGGRR
Trigger: TCTCCTTCCTCCCTCTTCCCAGCTGCTTGGCCCTGG...AGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
3UTR-3UTR TCA 90 bp CATCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTAGGGTAGACCTTTCCTaGTGTCCACCTGGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: HLTPAPVDPKLSALGLWTRVDLS*CPPGRP
Trigger: AGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCT...AGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
3UTR-3UTR CCA 90 bp CTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTACCAGGGCCAAGCAGCTaGGAAGAGGGAGGAAGGAGA +
Preference number: 2 (lower is better)
Translates to: LGLWTCLTRTLFRPLRPLPGPSS*EEGGRR
Trigger: TCTCCTTCCTCCCTCTTCCCAGCTGCTTGGCCCTGG...TAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
3UTR CCA 72 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTaGCTAACCAGGAGGCCTGGCCTTCGGCCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: QGRPFLMSTWQA*LTRRPGLRPSQ
Trigger: CTGGGAAGGCCGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
3UTR CCA 72 bp GCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATaGACTTGCCTCACGAGAACTCTCTTCAGGCCACTG +
Preference number: 3 (lower is better)
Translates to: APVDPKLSALGL*TCLTRTLFRPL
Trigger: CAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
3UTR TCA 72 bp GGCACATTCCAAAATCACAAGATCACAAACCAAGACTaGCCCTCAGCCAAGCATGGGACAGAACTTATGAGT +
Preference number: 3 (lower is better)
Translates to: GTFQNHKITNQD*PSAKHGTELMS
Trigger: ACTCATAAGTTCTGTCCCATGCTTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp GGCCTTCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGGGCAACCACTGGGCCTaGGCCTGTGGCTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GLRPSQGPTRAKQLGRGRGNHWA*ACGWEG
Trigger: GCCTTCCCAGCCACAGGCCCAGGCCCAGTGGTTGCC...CCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGAAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGGCCTTCCGCCTTCCGGGGAGGCTaGCTGCCACCAACCACAGCC +
Preference number: 4 (lower is better)
Translates to: LMSTWQAWLTRRPGLRPSAFRGG*LPPTTA
Trigger: GGCTGTGGTTGGTGGCAGCCAGCCTCCCCGGAAGGC...GGAAGGCCGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp GGCCTTCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGACTAGGAGCACAGGCTaGGTGGGAGCTGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GLRPSQGPTRAKQLGRGRTRSTG*VGAGQK
Trigger: CTTCTGCCCAGCTCCCACTCAGCCTGTGCTCCTAGT...CCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGAAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp GGCCTTCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGCGGCTTCCTCTTTCTTaGGCCTGCTACCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GLRPSQGPTRAKQLGRGRRLPLS*ACYPPP
Trigger: GGGAGGAGGGTAGCAGGCCCAAGAAAGAGGAAGCCG...CCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGAAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp GGCCTTCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGGGGTGGGGGTGGAGGTaGTGTGCCCTTCAAGAGTAC +
Preference number: 4 (lower is better)
Translates to: GLRPSQGPTRAKQLGRGRGWGWR*CALQEY
Trigger: GTACTCTTGAAGGGCACACCACCTCCACCCCCACCC...CCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGAAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTCCTGAGCCTTCACCCTaGGCCCGAGGCAGACGCCGG +
Preference number: 4 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPPEPSP*ARGRRR
Trigger: CCGGCGTCTGCCTCGGGCTCAGGGTGAAGGCTCAGG...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGGCCTTCCGGGCAACAGTGGGGATaGTGTGGCCCCAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LMSTWQAWLTRRPGLRPSGQQWG*CGPRLL
Trigger: GAGAAGCCTGGGGCCACATCATCCCCACTGTTGCCC...GGAAGGCCGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp GGCCTTCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGTGCTTGCGCATGTGCTaGTCCAAGTCCCCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GLRPSQGPTRAKQLGRGRCLRMC*SKSPKR
Trigger: CCTCTTCGGGGACTTGGAGCAGCACATGCGCAAGCA...CCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGAAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGGCCTTCCGGGGCTTCCAGGACCTaGTCAGCCCCAGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LMSTWQAWLTRRPGLRPSGASRT*SAPEGF
Trigger: AAAGCCCTCTGGGGCTGAGCAGGTCCTGGAAGCCCC...GGAAGGCCGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp ACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGCCACCAACCACAGCCTaGGACCCCGGGGTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: TFPDVHLAGLANQEAWPSPPTTA*DPGVGR
Trigger: CCTACCCACCCCGGGGTCCCAGGCTGTGGTTGGTGG...CGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp TCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGAAGGAGGGACCGAGGGGCCTTaGAAGCCCTGGAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SAFPGPYQGQAAGKREEGGTEGP*KPWRFL
Trigger: AAGGAACCTCCAGGGCTTCCAAGGCCCCTCGGTCCC...TCCTTCCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp GGCCTTCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGCGTGGGCACTCATGCTaGAGCAGCTGCCTGTACAAT +
Preference number: 4 (lower is better)
Translates to: GLRPSQGPTRAKQLGRGRRGHSC*SSCLYN
Trigger: ATTGTACAGGCAGCTGCTGCAGCATGAGTGCCCACG...CCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp TCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGAAGGACACCGTGGGCACTCATaGTGCAGCAGCTGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: SAFPGPYQGQAAGKREEGHRGHS*CSSCLY
Trigger: GTACAGGCAGCTGCTGCAGCATGAGTGCCCACGGTG...TCCTTCCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp TCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGAAGGAAAGGCATGGGTGAACTaGTCAGTGCTGCAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: SAFPGPYQGQAAGKREEGKAWVN*SVLQRP
Trigger: GGGCCGCTGCAGCACTGAGCAGTTCACCCATGCCTT...TCCTTCCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTACTGCCGGTTCTGGCGTaGCTCGGCCCGGCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: LGLWTCLTRTLFRPLRPLLPVLA*LGPAAA
Trigger: AGCCGCAGCCGGGCCGAGGCACGCCAGAACCGGCAG...TAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp TCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGAAGGAACTGCTGGGCTTGGGTaGGGAGGAAACCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SAFPGPYQGQAAGKREEGTAGLG*GGNQGR
Trigger: CCTGCCTTGGTTTCCTCCGCACCCAAGCCCAGCAGT...TCCTTCCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp TCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGAAGGAGGGGTGGAGGTGGTGTaGCCTTCAAGAGTACCACGG +
Preference number: 4 (lower is better)
Translates to: SAFPGPYQGQAAGKREEGGVEVV*PSRVPR
Trigger: CCGTGGTACTCTTGAAGGGCACACCACCTCCACCCC...TCCTTCCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGGCCTTCCGCCTGGGCCTGTGGCTaGGAAGGCTTCTTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: LMSTWQAWLTRRPGLRPSAWACG*EGFLAY
Trigger: GTAAGCCAAGAAGCCTTCCCAGCCACAGGCCCAGGC...GGAAGGCCGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGCAGCCCCTGCACAGTaGGGCCACCGCTATCCTCCT +
Preference number: 4 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPAAPAQ*GHRYPP
Trigger: AGGAGGATAGCGGTGGCCTCACTGTGCAGGGGCTGC...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp ACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGGGGCAACAGTGGGGATaGTGTGGCCCCAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TFPDVHLAGLANQEAWPSGQQWG*CGPRLL
Trigger: GAGAAGCCTGGGGCCACATCATCCCCACTGTTGCCC...CGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTCAGCTGCCGGTTCTGGCGTaGCTCGGCCCGGCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: LWTCLTRTLFRPLRPLAQLPVLA*LGPAAA
Trigger: AGCCGCAGCCGGGCCGAGGCACGCCAGAACCGGCAG...CTGAGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp GGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTCTTCCCCGGCGGTTCTaGTGGGCTCCACGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GLWTCLTRTLFRPLRPLALPRRF*WAPRPL
Trigger: CAGCGGGCGTGGAGCCCAGCAGAACCGCCGGGGAAG...AGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp GGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCTTCCCCGGCGGTTCTaGTGGGCTCCACGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GPEAVSSGAMDLPHENSLLPRRF*WAPRPL
Trigger: CAGCGGGCGTGGAGCCCAGCAGAACCGCCGGGGAAG...AAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGGCCTTCCCCTGGAAGGTGTTCTTaGCCCTGGGAGGACCAGGAT +
Preference number: 4 (lower is better)
Translates to: LMSTWQAWLTRRPGLRPSPGRCS*PWEDQD
Trigger: ATCCTGGTCCTCCCAGGGGCAAGAACACCTTCCAGG...GGAAGGCCGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGACTGGAAGGGGCACTaGTGGGCTTGGGTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPDWKGH*WAWVRR
Trigger: CCTCCGCACCCAAGCCCAGCAGTGCCCCTTCCAGTC...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTCCTGCTCCCCTTTCCTaGCTTCCGGGGAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPPAPLS*LPGRLA
Trigger: AGCCAGCCTCCCCGGAAGGCAGGAAAGGGGAGCAGG...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTTCAATCTGCCGGTTCTaGCGTGCCTCGGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPSICRF*RASARL
Trigger: CAGCCGGGCCGAGGCACGCCAGAACCGGCAGATTGA...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGGCCTTCCATCCTCCTCATCCACTaGGGCTGGGCCACCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LMSTWQAWLTRRPGLRPSILLIH*GWATLS
Trigger: AGAAAGGGTGGCCCAGCCCCAGTGGATGAGGAGGAT...GGAAGGCCGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGGCCTTCCAGCCCCAGAGGGCTTTaGGGTATGATCAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: LMSTWQAWLTRRPGLRPSSPRGL*GMIRGQ
Trigger: TTGCCCCCTGATCATACCCCAAAGCCCTCTGGGGCT...GGAAGGCCGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGTCTCCTCTTGCTGTTaGGCAGCCACAGAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPVSSCC*AATEAR
Trigger: CCGGGCCTCTGTGGCTGCTCAACAGCAAGAGGAGAC...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp TCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGAAGGACAGAAGAGCTCATGCTaGTTGCGCATGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SAFPGPYQGQAAGKREEGQKSSC*LRMCCS
Trigger: GGAGCAGCACATGCGCAAGCAGCATGAGCTCTTCTG...TCCTTCCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp TCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGAAGGAACCAGGATAAGCCAGTaGCAAGCCTACAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SAFPGPYQGQAAGKREEGTRISQ*QAYRAW
Trigger: CCAGGCTCTGTAGGCTTGGCACTGGCTTATCCTGGT...TCCTTCCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGGACTGGAAGGGGCACTaGTGGGCTTGGGTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLDWKGH*WAWVRR
Trigger: CCTCCGCACCCAAGCCCAGCAGTGCCCCTTCCAGTC...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTCCGTGTGCCAGTACCTaGTGGCAGGTGGGGCACACA +
Preference number: 4 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPPCAST*WQVGHT
Trigger: TGTGTGCCCCACCTGCCAGCAGGTACTGGCACACGG...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGTCAATCTGCCGGTTCTaGCGTGCCTCGGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLSICRF*RASARL
Trigger: CAGCCGGGCCGAGGCACGCCAGAACCGGCAGATTGA...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCGGCCAGCTCGGCCCTaGCGATTGTACCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLRPARP*RLYLST
Trigger: GGTGGACAGGTACAATCGCCAGGGCCGAGCTGGCCG...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTACCACCAACCACAGCCTaGGACCCCGGGGTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: LGLWTCLTRTLFRPLRPLPPTTA*DPGVGR
Trigger: CCTACCCACCCCGGGGTCCCAGGCTGTGGTTGGTGG...TAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp GGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTGCCTTCCGGGGAGGCTaGCTGCCACCAACCACAGCC +
Preference number: 4 (lower is better)
Translates to: GLWTCLTRTLFRPLRPLAAFRGG*LPPTTA
Trigger: GGCTGTGGTTGGTGGCAGCCAGCCTCCCCGGAAGGC...AGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CATCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTCACGGTGCTGAAGCCTaGGGGAGGAGGCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: HLTPAPVDPKLSALGLWTHGAEA*GRRHPG
Trigger: CCCAGGATGCCTCCTCCCCCAGGCTTCAGCACCGTG...AGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp TCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGAAGGACTGTTTTATGAGCCTTaGGGTCGATCTCGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: SAFPGPYQGQAAGKREEGLFYEP*GRSRCG
Trigger: TCCGCACCGAGATCGACCTCAAGGCTCATAAAACAG...TCCTTCCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CATCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTGTCTCCTCTTGCTGTTaGGCAGCCACAGAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: HLTPAPVDPKLSALGLWTVSSCC*AATEAR
Trigger: CCGGGCCTCTGTGGCTGCTCAACAGCAAGAGGAGAC...AGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTTGGTGGGAGGGTATTTaGGAGGGCAACCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPWWEGI*EGNHWA
Trigger: GGCCCAGTGGTTGCCCTCTCAAATACCCTCCCACCA...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGGCCTTCCAGAGCTCATGCTGCTTaGGCATGTGCTGCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LMSTWQAWLTRRPGLRPSRAHAA*ACAAPS
Trigger: ACTTGGAGCAGCACATGCGCAAGCAGCATGAGCTCT...GGAAGGCCGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGGGGGCTTCCAGGACCTaGTCAGCCCCAGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLGASRT*SAPEGF
Trigger: AAAGCCCTCTGGGGCTGAGCAGGTCCTGGAAGCCCC...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp GGCCTTCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGCAGGCCTCATCGCTTTaGAGAAAGTCCTTGATAGAC +
Preference number: 4 (lower is better)
Translates to: GLRPSQGPTRAKQLGRGRQASSL*RKSLID
Trigger: GTCTATCAAGGACTTTCTGCAAAGCGATGAGGCCTG...CCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGGCCTTCCGAGGCTTCTCACGACTaGAGAAGTCTGTGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LMSTWQAWLTRRPGLRPSEASHD*RSLCVQ
Trigger: CTGCACACACAGACTTCTGCAGTCGTGAGAAGCCTC...GGAAGGCCGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp TCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGAAGGAGAGGCTTCTCACGACTaGAGAAGTCTGTGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SAFPGPYQGQAAGKREEGEASHD*RSLCVQ
Trigger: CTGCACACACAGACTTCTGCAGTCGTGAGAAGCCTC...TCCTTCCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGTTCCCAAAGACCACCTaGCGCAGCTCCTCGCGGCAC +
Preference number: 4 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLFPKTT*RSSSRH
Trigger: GTGCCGCGAGGAGCTGCGCCAGGTGGTCTTTGGGAA...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTCAGGGCAACCACTGGGCCTaGGCCTGTGGCTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LWTCLTRTLFRPLRPLAQGNHWA*ACGWEG
Trigger: GCCTTCCCAGCCACAGGCCCAGGCCCAGTGGTTGCC...CTGAGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCTCATCCACTGGGGCTaGGCCACCCTTTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLLIHWG*ATLSAT
Trigger: GGTGGCAGAAAGGGTGGCCCAGCCCCAGTGGATGAG...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CATCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTGGGACCGAGGGGCCTTaGAAGCCCTGGAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: HLTPAPVDPKLSALGLWTGTEGP*KPWRFL
Trigger: AAGGAACCTCCAGGGCTTCCAAGGCCCCTCGGTCCC...AGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGTGGTGGGAGGGTATTTaGGAGGGCAACCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLWWEGI*EGNHWA
Trigger: GGCCCAGTGGTTGCCCTCTCAAATACCCTCCCACCA...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp AAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCAGCAGCCCCTGCACAGTaGGGCCACCGCTATCCTCCT +
Preference number: 4 (lower is better)
Translates to: KLSALGLWTCLTRTLFRPAAPAQ*GHRYPP
Trigger: AGGAGGATAGCGGTGGCCTCACTGTGCAGGGGCTGC...TGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAAGAGTACCACGGTGCTaGAGCCTGGGGGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LGLWTCLTRTLFRPLRPLRVPRC*SLGEEA
Trigger: TGCCTCCTCCCCCAGGCTTCAGCACCGTGGTACTCT...TAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp GGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTAGAGTACCACGGTGCTaGAGCCTGGGGGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GLWTCLTRTLFRPLRPLARVPRC*SLGEEA
Trigger: TGCCTCCTCCCCCAGGCTTCAGCACCGTGGTACTCT...AGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp ACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGCTGGTTGGTGGCTGGTaGCAGCAAAGAAGACACAGC +
Preference number: 4 (lower is better)
Translates to: TFPDVHLAGLANQEAWPSLVGGW*QQRRHS
Trigger: GCTGTGTCTTCTTTGCTGGCACCAGCCACCAACCAG...CGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTACCGTGTGCCAGTACCTaGTGGCAGGTGGGGCACACA +
Preference number: 4 (lower is better)
Translates to: LGLWTCLTRTLFRPLRPLPCAST*WQVGHT
Trigger: TGTGTGCCCCACCTGCCAGCAGGTACTGGCACACGG...TAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp GGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTTTCCCAAAGACCACCTaGCGCAGCTCCTCGCGGCAC +
Preference number: 4 (lower is better)
Translates to: GLWTCLTRTLFRPLRPLAFPKTT*RSSSRH
Trigger: GTGCCGCGAGGAGCTGCGCCAGGTGGTCTTTGGGAA...AGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCATCGGTGCGGAAGGCATaGGTGAACTGCTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LQHQWTRSCQLWGYGLASSVRKA*VNCSVL
Trigger: CAGCACTGAGCAGTTCACCCATGCCTTCCGCACCGA...TGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp AAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACGGCCAGCTCGGCCCTaGCGATTGTACCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: KLSALGLWTCLTRTLFRPRPARP*RLYLST
Trigger: GGTGGACAGGTACAATCGCCAGGGCCGAGCTGGCCG...TGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGTGGAAGGGGCACTGCTaGGCTTGGGTGCGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLWKGHC*AWVRRK
Trigger: TTTCCTCCGCACCCAAGCCCAGCAGTGCCCCTTCCA...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp GGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCTCATCCACTGGGGCTaGGCCACCCTTTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: GPEAVSSGAMDLPHENSLLIHWG*ATLSAT
Trigger: GGTGGCAGAAAGGGTGGCCCAGCCCCAGTGGATGAG...AAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTACAGTGGGGATGATGTaGCCCCAGGCTTCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPTVGMM*PQASQS
Trigger: GCTCTGAGAAGCCTGGGGCCACATCATCCCCACTGT...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCTGTTTGGCTGTGTCTaGCAGGAGCGCCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLLFGCV*QERQQL
Trigger: GAGCTGCTGGCGCTCCTGCCAGACACAGCCAAACAG...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp GGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTGCGTGCAGTGCCTGGTaGCTGCTGACGTCACCGTGT +
Preference number: 4 (lower is better)
Translates to: GLWTCLTRTLFRPLRPLAACSAW*LLTSPC
Trigger: ACACGGTGACGTCAGCAGCCACCAGGCACTGCACGC...AGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTACTCGGCGCAGGTGCTTaGGCAGCTCGTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: LGLWTCLTRTLFRPLRPLLGAGA*AARHCP
Trigger: TGGACAATGACGAGCTGCTCAAGCACCTGCGCCGAG...TAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAACTAGGAGCACAGGCTaGGTGGGAGCTGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LGLWTCLTRTLFRPLRPLTRSTG*VGAGQK
Trigger: CTTCTGCCCAGCTCCCACTCAGCCTGTGCTCCTAGT...TAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTCGTGGGCACTCATGCTaGAGCAGCTGCCTGTACAAT +
Preference number: 4 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPRGHSC*SSCLYN
Trigger: ATTGTACAGGCAGCTGCTGCAGCATGAGTGCCCACG...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACAGAAGAGCTCATGCTaGTTGCGCATGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LQHQWTRSCQLWGYGLASQKSSC*LRMCCS
Trigger: GGAGCAGCACATGCGCAAGCAGCATGAGCTCTTCTG...TGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp GGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTAAGGCATGGGTGAACTaGTCAGTGCTGCAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: GPEAVSSGAMDLPHENSLKAWVN*SVLQRP
Trigger: GGGCCGCTGCAGCACTGAGCAGTTCACCCATGCCTT...AAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp ACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGCTGGCACTTCAGCTTTaGTCAAAGGGGCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TFPDVHLAGLANQEAWPSLALQL*SKGLPG
Trigger: TCCTGGAAGCCCCTTTGAGCAAAGCTGAAGTGCCAG...CGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGGCCTTCCTGTTGGGTGCTGGTCTaGCACACATTCTTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LMSTWQAWLTRRPGLRPSCWVLV*HTFFLF
Trigger: GAACAAGAAGAATGTGTGGCAGACCAGCACCCAACA...GGAAGGCCGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCATTGCTGAGGCTTCCTTaGAGCCTGAGCCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: LQHQWTRSCQLWGYGLASLLRLP*SLSLHP
Trigger: AGGGTGAAGGCTCAGGCTCCAAGGAAGCCTCAGCAA...TGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp GGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTTGGAAGGGGCACTGCTaGGCTTGGGTGCGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GLWTCLTRTLFRPLRPLAWKGHC*AWVRRK
Trigger: TTTCCTCCGCACCCAAGCCCAGCAGTGCCCCTTCCA...AGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGAGCCCCAGAGGGCTTTaGGGTATGATCAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLSPRGL*GMIRGQ
Trigger: TTGCCCCCTGATCATACCCCAAAGCCCTCTGGGGCT...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp AAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCAGCGTGCAGTGCCTGGTaGCTGCTGACGTCACCGTGT +
Preference number: 4 (lower is better)
Translates to: KLSALGLWTCLTRTLFRPACSAW*LLTSPC
Trigger: ACACGGTGACGTCAGCAGCCACCAGGCACTGCACGC...TGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCAAGCCAGGTCCTTGCGTaGGTACCACTTGCGTTCATA +
Preference number: 4 (lower is better)
Translates to: LQHQWTRSCQLWGYGLASSQVLA*VPLAFI
Trigger: TATGAACGCAAGTGGTACTCACGCAAGGACCTGGCT...TGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTCAGCTCGGCGCAGGTGCTTaGGCAGCTCGTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: LWTCLTRTLFRPLRPLAQLGAGA*AARHCP
Trigger: TGGACAATGACGAGCTGCTCAAGCACCTGCGCCGAG...CTGAGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CCCTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAACCTGAGCCTTCACCCTaGGCCCGAGGCAGACGCCGG +
Preference number: 4 (lower is better)
Translates to: PWHIPKSQDHKPRLTLSQPEPSP*ARGRRR
Trigger: CCGGCGTCTGCCTCGGGCTCAGGGTGAAGGCTCAGG...TTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTTATTCCAAGCTGAGATaGGACTGGAAGGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPYSKLR*DWKGHC
Trigger: GCAGTGCCCCTTCCAGTCTCATCTCAGCTTGGAATA...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CATCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTCAGCAGAAGAGCTCATaGTGCTTGCGCATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HLTPAPVDPKLSALGLWTQQKSS*CLRMCC
Trigger: GCAGCACATGCGCAAGCAGCATGAGCTCTTCTGCTG...AGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp AAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTCAGGCACCCTGGCTaGGGCTTCCTCTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KLSALGLWTCLTRTLFRPLRHPG*GFLFLG
Trigger: CCCAAGAAAGAGGAAGCCGCAGCCAGGGTGCCTGAG...TGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp GGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCCTGGAAGGTGTTCTTaGCCCTGGGAGGACCAGGAT +
Preference number: 4 (lower is better)
Translates to: GPEAVSSGAMDLPHENSLPGRCS*PWEDQD
Trigger: ATCCTGGTCCTCCCAGGGGCAAGAACACCTTCCAGG...AAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTCAGACTGCTGGGCTTGGGTaGGGAGGAAACCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LWTCLTRTLFRPLRPLAQTAGLG*GGNQGR
Trigger: CCTGCCTTGGTTTCCTCCGCACCCAAGCCCAGCAGT...CTGAGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTCAGGGGGTGGAGGTGGTGTaGCCTTCAAGAGTACCACGG +
Preference number: 4 (lower is better)
Translates to: LWTCLTRTLFRPLRPLAQGVEVV*PSRVPR
Trigger: CCGTGGTACTCTTGAAGGGCACACCACCTCCACCCC...CTGAGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp GGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTGCAGACAGCAGCTCCTaGTGTTTGGCTGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GPEAVSSGAMDLPHENSLADSSS*CLAVSG
Trigger: GCCAGACACAGCCAAACAGCAGGAGCTGCTGTCTGC...AAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp GGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTGCAGACAGCAGCTCCTaGTGTTTGGCTGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GLWTCLTRTLFRPLRPLAADSSS*CLAVSG
Trigger: GCCAGACACAGCCAAACAGCAGGAGCTGCTGTCTGC...AGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGGCAGAAGTCTGTGTGTaGAGACAGCAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLAEVCV*RQQLLL
Trigger: CAGCAGGAGCTGCTGTCTGCACACACAGACTTCTGC...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGTTGCTGAGGCTTCCTTaGAGCCTGAGCCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLLLRLP*SLSLHP
Trigger: AGGGTGAAGGCTCAGGCTCCAAGGAAGCCTCAGCAA...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTCAGGCCTGGGCCTGTGGCTaGGAAGGCTTCTTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: LWTCLTRTLFRPLRPLAQAWACG*EGFLAY
Trigger: GTAAGCCAAGAAGCCTTCCCAGCCACAGGCCCAGGC...CTGAGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CATCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTAGGTGTTCTTGCCCCTaGGAGGACCAGGATAAGCCA +
Preference number: 4 (lower is better)
Translates to: HLTPAPVDPKLSALGLWTRCSCP*EDQDKP
Trigger: TGGCTTATCCTGGTCCTCCCAGGGGCAAGAACACCT...AGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp GGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTATCCTCCTCATCCACTaGGGCTGGGCCACCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GLWTCLTRTLFRPLRPLAILLIH*GWATLS
Trigger: AGAAAGGGTGGCCCAGCCCCAGTGGATGAGGAGGAT...AGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTCTGAACTCTGGTTGGTaGCTGGTGCCAGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPLNSGW*LVPAKK
Trigger: CTTCTTTGCTGGCACCAGCCACCAACCAGAGTTCAG...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTCAGTGGAAAGTCCTCCTGTaGTATGGGGCAGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LWTCLTRTLFRPLRPLAQWKVLL*YGAGEG
Trigger: CCCCTCCCCTGCCCCATACCACAGGAGGACTTTCCA...CTGAGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp AAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCAGGGTGGGGGTGGAGGTaGTGTGCCCTTCAAGAGTAC +
Preference number: 4 (lower is better)
Translates to: KLSALGLWTCLTRTLFRPGWGWR*CALQEY
Trigger: GTACTCTTGAAGGGCACACCACCTCCACCCCCACCC...TGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCATGGCAAGCTGTTTTATaGGCCTTGAGGTCGATCTCG +
Preference number: 4 (lower is better)
Translates to: LQHQWTRSCQLWGYGLASWQAVL*ALRSIS
Trigger: CGAGATCGACCTCAAGGCTCATAAAACAGCTTGCCA...TGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGTATTCCAAGCTGAGATaGGACTGGAAGGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLYSKLR*DWKGHC
Trigger: GCAGTGCCCCTTCCAGTCTCATCTCAGCTTGGAATA...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp GGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGCAGAAGAGCTCATaGTGCTTGCGCATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPEAVSSGAMDLPHENSLQQKSS*CLRMCC
Trigger: GCAGCACATGCGCAAGCAGCATGAGCTCTTCTGCTG...AAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGTCGAGCCAGGTCCTTaGGTGAGTACCACTTGCGTT +
Preference number: 4 (lower is better)
Translates to: LGLWTCLTRTLFRPLRPLVEPGP*VSTTCV
Trigger: AACGCAAGTGGTACTCACGCAAGGACCTGGCTCGAC...TAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTCAGGGCCCGGATAGCAGCTaGCACTTCTCGGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LWTCLTRTLFRPLRPLAQGPDSS*HFSVFF
Trigger: GAAGAAGACCGAGAAGTGGCAGCTGCTATCCGGGCC...CTGAGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCTCCAAGCAGGTCCCTaGAGCTCTTGTAGTACTGAG +
Preference number: 4 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLLQAGP*SSCSTE
Trigger: CTCAGTACTACAAGAGCTGCAGGGACCTGCTTGGAG...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CATCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTGTTGGAGCTGATGGATaGGGATCAGGGCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: HLTPAPVDPKLSALGLWTVGADG*GSGQKQ
Trigger: CTGCTTTTGCCCTGATCCCCATCCATCAGCTCCAAC...AGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CATCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTGGAAAGTCCTCTTCCTaGAAGGTGTTCTTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HLTPAPVDPKLSALGLWTGKSSS*KVFLPL
Trigger: CAGGGGCAAGAACACCTTCCAGGAAGAGGACTTTCC...AGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp TCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGAAGGAAAGTCCTTGATAGACTaGATAAGCTGCAGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SAFPGPYQGQAAGKREEGKSLID*ISCRFL
Trigger: GAGAAACCTGCAGCTTATCCAGTCTATCAAGGACTT...TCCTTCCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CATCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGGCAAGCTGTTTTATaGGCCTTGAGGTCGATCTCG +
Preference number: 4 (lower is better)
Translates to: HLTPAPVDPKLSALGLWTWQAVL*ALRSIS
Trigger: CGAGATCGACCTCAAGGCTCATAAAACAGCTTGCCA...AGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp GGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTTCCTCACACAGGAAGTaGTTCTCCCGGAAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GLWTCLTRTLFRPLRPLASSHRK*FSRKCS
Trigger: TGAGCACTTCCGGGAGAAGCACTTCCTGTGTGAGGA...AGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp AAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCAACCAGGATAAGCCAGTaGCAAGCCTACAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KLSALGLWTCLTRTLFRPTRISQ*QAYRAW
Trigger: CCAGGCTCTGTAGGCTTGGCACTGGCTTATCCTGGT...TGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGCCCTGCTCCCCTTTCCTaGCTTCCGGGGAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LAHSKITRSQTKTDPQPSPAPLS*LPGRLA
Trigger: AGCCAGCCTCCCCGGAAGGCAGGAAAGGGGAGCAGG...GCTTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp AAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGGTTGGTGGCTGGTaGCAGCAAAGAAGACACAGC +
Preference number: 4 (lower is better)
Translates to: KLSALGLWTCLTRTLFRPLVGGW*QQRRHS
Trigger: GCTGTGTCTTCTTTGCTGGCACCAGCCACCAACCAG...TGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTCCACCTTCTTCTTCTTaGCAACCTTGGCTGAACTCT +
Preference number: 4 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPPPSSS*QPWLNS
Trigger: AGAGTTCAGCCAAGGTTGGCAAGAAGAAGAAGGTGG...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTTGTTGGGTGCTGGTCTaGCACACATTCTTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPCWVLV*HTFFLF
Trigger: GAACAAGAAGAATGTGTGGCAGACCAGCACCCAACA...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp GGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTGTTGGAGCTGATGGATaGGGATCAGGGCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GLWTCLTRTLFRPLRPLAVGADG*GSGQKQ
Trigger: CTGCTTTTGCCCTGATCCCCATCCATCAGCTCCAAC...AGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTCAGAGGTGTTCTTGCCCCTaGGAGGACCAGGATAAGCCA +
Preference number: 4 (lower is better)
Translates to: LWTCLTRTLFRPLRPLAQRCSCP*EDQDKP
Trigger: TGGCTTATCCTGGTCCTCCCAGGGGCAAGAACACCT...CTGAGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp GGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTGGAAAGTCCTCTTCCTaGAAGGTGTTCTTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GPEAVSSGAMDLPHENSLGKSSS*KVFLPL
Trigger: CAGGGGCAAGAACACCTTCCAGGAAGAGGACTTTCC...AAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp GGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTCTGAACTCTGGTTGGTaGCTGGTGCCAGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GLWTCLTRTLFRPLRPLALNSGW*LVPAKK
Trigger: CTTCTTTGCTGGCACCAGCCACCAACCAGAGTTCAG...AGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CCCTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAACACGGTGCTGAAGCCTaGGGGAGGAGGCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: PWHIPKSQDHKPRLTLSQHGAEA*GRRHPG
Trigger: CCCAGGATGCCTCCTCCCCCAGGCTTCAGCACCGTG...TTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CATCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTCAGCTGCCTGTACAATaGAAACACCTTTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: HLTPAPVDPKLSALGLWTQLPVQ*KHLSIC
Trigger: GCAGATGGAAAGGTGTTTGCATTGTACAGGCAGCTG...AGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCAGCTGCCTGTACAATaGAAACACCTTTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLQLPVQ*KHLSIC
Trigger: GCAGATGGAAAGGTGTTTGCATTGTACAGGCAGCTG...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp AAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCATCCTCACACAGGAAGTaGTTCTCCCGGAAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: KLSALGLWTCLTRTLFRPSSHRK*FSRKCS
Trigger: TGAGCACTTCCGGGAGAAGCACTTCCTGTGTGAGGA...TGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTGGGAAGGCTTCTTaGCTTACAGGACCATTTGCT +
Preference number: 4 (lower is better)
Translates to: LGLWTCLTRTLFRPLRPLAGKAS*LTGPFA
Trigger: AGCAAATGGTCCTGTAAGCCAAGAAGCCTTCCCAGC...TAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CCCTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAACGGCTTCCTCTTTCTTaGGCCTGCTACCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PWHIPKSQDHKPRLTLSQRLPLS*ACYPPP
Trigger: GGGAGGAGGGTAGCAGGCCCAAGAAAGAGGAAGCCG...TTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp AAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCAGCTGGGAAGGCTTCTTaGCTTACAGGACCATTTGCT +
Preference number: 4 (lower is better)
Translates to: KLSALGLWTCLTRTLFRPAGKAS*LTGPFA
Trigger: AGCAAATGGTCCTGTAAGCCAAGAAGCCTTCCCAGC...TGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGCTGGAAAGTCCTCCTGTaGTATGGGGCAGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LAHSKITRSQTKTDPQPSWKVLL*YGAGEG
Trigger: CCCCTCCCCTGCCCCATACCACAGGAGGACTTTCCA...GCTTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGCCTGTTTGGCTGTGTCTaGCAGGAGCGCCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LAHSKITRSQTKTDPQPSLFGCV*QERQQL
Trigger: GAGCTGCTGGCGCTCCTGCCAGACACAGCCAAACAG...GCTTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CCCTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAATGCTTGCGCATGTGCTaGTCCAAGTCCCCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PWHIPKSQDHKPRLTLSQCLRMC*SKSPKR
Trigger: CCTCTTCGGGGACTTGGAGCAGCACATGCGCAAGCA...TTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGCGGCCCGGATAGCAGCTaGCACTTCTCGGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LAHSKITRSQTKTDPQPSGPDSS*HFSVFF
Trigger: GAAGAAGACCGAGAAGTGGCAGCTGCTATCCGGGCC...GCTTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTCAGCCACCTTCTTCTTCTTaGCAACCTTGGCTGAACTCT +
Preference number: 4 (lower is better)
Translates to: LWTCLTRTLFRPLRPLAQPPSSS*QPWLNS
Trigger: AGAGTTCAGCCAAGGTTGGCAAGAAGAAGAAGGTGG...CTGAGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp GGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTATAGACTGGATAAGCTaGAGGTTTCTCTCCCGGAAA +
Preference number: 4 (lower is better)
Translates to: GLWTCLTRTLFRPLRPLAIDWIS*RFLSRK
Trigger: TTTCCGGGAGAGAAACCTGCAGCTTATCCAGTCTAT...AGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp GGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTATAGACTGGATAAGCTaGAGGTTTCTCTCCCGGAAA +
Preference number: 4 (lower is better)
Translates to: GPEAVSSGAMDLPHENSLIDWIS*RFLSRK
Trigger: TTTCCGGGAGAGAAACCTGCAGCTTATCCAGTCTAT...AAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CCA 90 bp CCCTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAACAGTGGGGATGATGTaGCCCCAGGCTTCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PWHIPKSQDHKPRLTLSQTVGMM*PQASQS
Trigger: GCTCTGAGAAGCCTGGGGCCACATCATCCCCACTGT...TTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CCCTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGTCGAGCCAGGTCCTTaGGTGAGTACCACTTGCGTT +
Preference number: 4 (lower is better)
Translates to: PWHIPKSQDHKPRLTLSQVEPGP*VSTTCV
Trigger: AACGCAAGTGGTACTCACGCAAGGACCTGGCTCGAC...TTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGCGCAGAAGTCTGTGTGTaGAGACAGCAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LAHSKITRSQTKTDPQPSAEVCV*RQQLLL
Trigger: CAGCAGGAGCTGCTGTCTGCACACACAGACTTCTGC...GCTTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR TCA 90 bp CCCTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAAGCCAGGTCCTTGCGTaGGTACCACTTGCGTTCATA +
Preference number: 4 (lower is better)
Translates to: PWHIPKSQDHKPRLTLSQSQVLA*VPLAFI
Trigger: TATGAACGCAAGTGGTACTCACGCAAGGACCTGGCT...TTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGCAGAGCTCATGCTGCTTaGGCATGTGCTGCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LAHSKITRSQTKTDPQPSRAHAA*ACAAPS
Trigger: ACTTGGAGCAGCACATGCGCAAGCAGCATGAGCTCT...GCTTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CCCTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAACTCCAAGCAGGTCCCTaGAGCTCTTGTAGTACTGAG +
Preference number: 4 (lower is better)
Translates to: PWHIPKSQDHKPRLTLSQLQAGP*SSCSTE
Trigger: CTCAGTACTACAAGAGCTGCAGGGACCTGCTTGGAG...TTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR GCA 90 bp CTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGCCAGGCCTCATCGCTTTaGAGAAAGTCCTTGATAGAC +
Preference number: 4 (lower is better)
Translates to: LAHSKITRSQTKTDPQPSQASSL*RKSLID
Trigger: GTCTATCAAGGACTTTCTGCAAAGCGATGAGGCCTG...GCTTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CCA 90 bp GAGCCCGAGGCAGACGCCGGTGGCCACGGGGTTCCTCAGGCACCCTaGCTGCGGCTTCCTCTTTCTTGGGCCTGCTACCCTCCTCCCGGT +
Preference number: 5 (lower is better)
Translates to: EPEADAGGHGVPQAP*LRLPLSWACYPPPG
Trigger: ACCGGGAGGAGGGTAGCAGGCCCAAGAAAGAGGAAGCCGCAGCCAGGGTGCCTGAGGAACCCCGTGGCCACCGGCGTCTGCCTCGGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CCA 90 bp ACTTCTCGGTCTTCTTCTTCCCTCCAGCTTCCCCGGCGGTTCTGCTaGGCTCCACGCCCGCTGGCCCGGCCAGCTCGGCCCTGGCGATTG +
Preference number: 5 (lower is better)
Translates to: TSRSSSSLQLPRRFC*APRPLARPARPWRL
Trigger: CAATCGCCAGGGCCGAGCTGGCCGGGCCAGCGGGCGTGGAGCCCAGCAGAACCGCCGGGGAAGCTGGAGGGAAGAAGAAGACCGAGAAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047179.7
CDS TCA 90 bp ACAGGACCATTTGCTGAGGCTTCCTTGGAGCCTGAGCCTTCACCCTaGGCCCGAGGCAGACGCCGGTGGCCACGGGGTTCCTCAGGCACC +
Preference number: 5 (lower is better)
Translates to: TGPFAEASLEPEPSP*ARGRRRWPRGSSGT
Trigger: GGTGCCTGAGGAACCCCGTGGCCACCGGCGTCTGCCTCGGGCTCAGGGTGAAGGCTCAGGCTCCAAGGAAGCCTCAGCAAATGGTCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS TCA 90 bp AAGACACAGCTACCGTGGTGGGCACACTCCGCAGCCCCTGCACAGTaGGGCCACCGCTATCCTCCTCATCCACTGGGGCTGGGCCACCCT +
Preference number: 5 (lower is better)
Translates to: KTQLPWWAHSAAPAQ*GHRYPPHPLGLGHP
Trigger: AGGGTGGCCCAGCCCCAGTGGATGAGGAGGATAGCGGTGGCCTCACTGTGCAGGGGCTGCGGAGTGTGCCCACCACGGTAGCTGTGTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CCA 90 bp GGGTGGAGGTGGTGTGCCCTTCAAGAGTACCACGGTGCTGAAGCCTaGGGGAGGAGGCATCCTGGGTGGACAAGGGCCTCCGAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GWRWCALQEYHGAEA*GRRHPGWTRASESW
Trigger: CCAGCTCTCGGAGGCCCTTGTCCACCCAGGATGCCTCCTCCCCCAGGCTTCAGCACCGTGGTACTCTTGAAGGGCACACCACCTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS TCA 90 bp ACGACTCCCTCACTCCGGCGTGAGTGCCGTGGTGCAAAGCTAAACTaGAGGTCAATCTGCCGGTTCTGGCGTGCCTCGGCCCGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: TTPSLRRECRGAKLN*RSICRFWRASARLR
Trigger: CCGCAGCCGGGCCGAGGCACGCCAGAACCGGCAGATTGACCTTCAGTTTAGCTTTGCACCACGGCACTCACGCCGGAGTGAGGGAGTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGGCCTTCCTCTCGGCGCAGGTGCTaGAGCAGCTCGTCATTGTCC +
Preference number: 5 (lower is better)
Translates to: LMSTWQAWLTRRPGLRPSSRRRC*SSSSLS
Trigger: GGACAATGACGAGCTGCTCAAGCACCTGCGCCGAGA...GGAAGGCCGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp TCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGAAGGAGTGGTGGGAGGGTATTaGAGAGGGCAACCACTGGGC +
Preference number: 5 (lower is better)
Translates to: SAFPGPYQGQAAGKREEGVVGGY*RGQPLG
Trigger: GCCCAGTGGTTGCCCTCTCAAATACCCTCCCACCAC...TCCTTCCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS TCA 90 bp GCTCATGCTGCTTGCGCATGTGCTGCTCCAAGTCCCCGAAGAGGCTaGAGGGTGGCAGGTGAGGGCACCGTGGGCACTCATGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: AHAACACAAPSPRRG*RVAGEGTVGTHAAA
Trigger: TGCTGCAGCATGAGTGCCCACGGTGCCCTCACCTGCCACCCTTCAGCCTCTTCGGGGACTTGGAGCAGCACATGCGCAAGCAGCATGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCAGCTCGGCCCTGGCGATaGTACCTGTCCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LQHQWTRSCQLWGYGLASARPWR*YLSTSS
Trigger: CGAGGAGGTGGACAGGTACAATCGCCAGGGCCGAGC...TGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCAAAGCCAGGGGGTGGCTaGCTGATGGGAGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: LQHQWTRSCQLWGYGLASKPGGG*LMGGTR
Trigger: CCTGGTGCCTCCCATCAGCAAGCCACCCCCTGGCTT...TGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS TCA 90 bp TTCTGGCGTGCCTCGGCCCGGCTGCGGCTGTGGCAAGCTGTTTTATaGGCCTTGAGGTCGATCTCGGTGCGGAAGGCATGGGTGAACTGC +
Preference number: 5 (lower is better)
Translates to: FWRASARLRLWQAVL*ALRSISVRKAWVNC
Trigger: GCAGTTCACCCATGCCTTCCGCACCGAGATCGACCTCAAGGCTCATAAAACAGCTTGCCACAGCCGCAGCCGGGCCGAGGCACGCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CCA 90 bp GTGGTGGTGGTGGTTGTGGTGGTGGGACTAGGAGCACAGGCTGAGTaGGAGCTGGGCAGAAGACTAGAGAAGCCAGGGGGTGGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: VVVVVVVVGLGAQAE*ELGRRLEKPGGGLL
Trigger: CAGCAAGCCACCCCCTGGCTTCTCTAGTCTTCTGCCCAGCTCCCACTCAGCCTGTGCTCCTAGTCCCACCACCACAACCACCACCACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGCGGCTTCCTCTTTCTaGGGCCTGCTACCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPAASSF*GLLPSS
Trigger: GGAGGAGGGTAGCAGGCCCAAGAAAGAGGAAGCCGC...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGGCCCTGGAGGTTCCTTaGGGGCACTCCGTACCAGGG +
Preference number: 5 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLALEVP*GHSVPG
Trigger: CCCTGGTACGGAGTGCCCCAAAGGAACCTCCAGGGC...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CATCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTGCCCTGGAGGTTCCTTaGGGGCACTCCGTACCAGGG +
Preference number: 5 (lower is better)
Translates to: HLTPAPVDPKLSALGLWTALEVP*GHSVPG
Trigger: CCCTGGTACGGAGTGCCCCAAAGGAACCTCCAGGGC...AGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp TCGGCCTTCCCAGGGCCCTACCAGGGCCAAGCAGCTGGGAAGAGGGAGGAAGGATGCTTGAGGCACAACTaGCAGCAGAAGAGCTCATGC +
Preference number: 5 (lower is better)
Translates to: SAFPGPYQGQAAGKREEGCLRHN*QQKSSC
Trigger: GCATGAGCTCTTCTGCTGCAAGTTGTGCCTCAAGCA...TCCTTCCTCCCTCTTCCCAGCTGCTTGGCCCTGGTAGGGCCCTGGGAAGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTTCTCGGCGCAGGTGCTaGAGCAGCTCGTCATTGTCC +
Preference number: 5 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPSRRRC*SSSSLS
Trigger: GGACAATGACGAGCTGCTCAAGCACCTGCGCCGAGA...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp GGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTGCTCGGCCCTGGCGATaGTACCTGTCCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GLWTCLTRTLFRPLRPLAARPWR*YLSTSS
Trigger: CGAGGAGGTGGACAGGTACAATCGCCAGGGCCGAGC...AGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCAGGGAAGTCTTCCTCCTaGAGCTCAGGGCTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: LQHQWTRSCQLWGYGLASGKSSS*SSGLGG
Trigger: ACCACCCAGCCCTGAGCTCAAGGAGGAAGACTTCCC...TGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTCAGGGGGACCGAGGGGCCTaGGAAGCCCTGGAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: LWTCLTRTLFRPLRPLAQGDRGA*EALEVP
Trigger: AGGAACCTCCAGGGCTTCCAAGGCCCCTCGGTCCCC...CTGAGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 90 bp AGTCTCCTCTTGCTGTTGAGCAGCCACAGAGGCCCGGATAGCAGCTaGCACTTCTCGGTCTTCTTCTTCCCTCCAGCTTCCCCGGCGGTT +
Preference number: 5 (lower is better)
Translates to: SLLLLLSSHRGPDSS*HFSVFFFPPASPAV
Trigger: AACCGCCGGGGAAGCTGGAGGGAAGAAGAAGACCGAGAAGTGGCAGCTGCTATCCGGGCCTCTGTGGCTGCTCAACAGCAAGAGGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047179.7
CDS GCA 90 bp TTCCTGGAAGGTGTTCTTGCCCCTGGGAGGACCAGGATAAGCCAGTaGCAAGCCTACAGAGCCTGGGGTAACCGCTGTGCAGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: FLEGVLAPGRTRISQ*QAYRAWGNRCAAGG
Trigger: TCCTCCTGCTGCACAGCGGTTACCCCAGGCTCTGTAGGCTTGGCACTGGCTTATCCTGGTCCTCCCAGGGGCAAGAACACCTTCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CCA 90 bp CTCCAAGTCCCCGAAGAGGCTGAAGGGTGGCAGGTGAGGGCACCGTaGGCACTCATGCTGCAGCAGCTGCCTGTACAATGCAAACACCTT +
Preference number: 5 (lower is better)
Translates to: LQVPEEAEGWQVRAP*ALMLQQLPVQCKHL
Trigger: AAGGTGTTTGCATTGTACAGGCAGCTGCTGCAGCATGAGTGCCCACGGTGCCCTCACCTGCCACCCTTCAGCCTCTTCGGGGACTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCATTTGCTGAGGCTTCCTaGGAGCCTGAGCCTTCACCC +
Preference number: 5 (lower is better)
Translates to: LQHQWTRSCQLWGYGLASFAEAS*EPEPSP
Trigger: GGGTGAAGGCTCAGGCTCCAAGGAAGCCTCAGCAAA...TGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp ACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTGGCCTTCGTTGGCTGAACTCTGGTaGGTGGCTGGTGCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: TFPDVHLAGLANQEAWPSLAELW*VAGASK
Trigger: TTTGCTGGCACCAGCCACCAACCAGAGTTCAGCCAA...CGAAGGCCAGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp AAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCAAAGCCAGGGGGTGGCTaGCTGATGGGAGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: KLSALGLWTCLTRTLFRPKPGGG*LMGGTR
Trigger: CCTGGTGCCTCCCATCAGCAAGCCACCCCCTGGCTT...TGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 90 bp CCGTGGTGCAAAGCTAAACTGAAGGTCAATCTGCCGGTTCTGGCGTaGCTCGGCCCGGCTGCGGCTGTGGCAAGCTGTTTTATGAGCCTT +
Preference number: 5 (lower is better)
Translates to: PWCKAKLKVNLPVLA*LGPAAAVASCFMSL
Trigger: AAGGCTCATAAAACAGCTTGCCACAGCCGCAGCCGGGCCGAGGCACGCCAGAACCGGCAGATTGACCTTCAGTTTAGCTTTGCACCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAAGTCTCCTCTTGCTGTaGAGCAGCCACAGAGGCCCG +
Preference number: 5 (lower is better)
Translates to: LGLWTCLTRTLFRPLRPLSLLLL*SSHRGP
Trigger: CGGGCCTCTGTGGCTGCTCAACAGCAAGAGGAGACT...TAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp AAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCAGCGGCTTCCTCTTTCTaGGGCCTGCTACCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KLSALGLWTCLTRTLFRPAASSF*GLLPSS
Trigger: GGAGGAGGGTAGCAGGCCCAAGAAAGAGGAAGCCGC...TGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTTTGGCTGAACTCTGGTaGGTGGCTGGTGCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPLAELW*VAGASK
Trigger: TTTGCTGGCACCAGCCACCAACCAGAGTTCAGCCAA...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 90 bp GGGATGATGTGGCCCCAGGCTTCTCAGAGCCCACCTTCTTCTTCTTaGCAACCTTGGCTGAACTCTGGTTGGTGGCTGGTGCCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: GMMWPQASQSPPSSS*QPWLNSGWWLVPAK
Trigger: CTTTGCTGGCACCAGCCACCAACCAGAGTTCAGCCAAGGTTGGCAAGAAGAAGAAGGTGGGCTCTGAGAAGCCTGGGGCCACATCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTATGTCGAGCCAGGTCCTaGCGTGAGTACCACTTGCGT +
Preference number: 5 (lower is better)
Translates to: LGLWTCLTRTLFRPLRPLCRARS*REYHLR
Trigger: ACGCAAGTGGTACTCACGCAAGGACCTGGCTCGACA...TAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGGGCTGGGAAGGCTTCTaGGCTTACAGGACCATTTGC +
Preference number: 5 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLGWEGF*AYRTIC
Trigger: GCAAATGGTCCTGTAAGCCAAGAAGCCTTCCCAGCC...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTCAGGTGGTGGGAGGGTATTaGAGAGGGCAACCACTGGGC +
Preference number: 5 (lower is better)
Translates to: LWTCLTRTLFRPLRPLAQVVGGY*RGQPLG
Trigger: GCCCAGTGGTTGCCCTCTCAAATACCCTCCCACCAC...CTGAGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGTCTTCTTCTTCCCTCTaGTACCTCCAGCTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLSSSSL*YLQLPR
Trigger: CCGGGGAAGCTGGAGGTACAAGAGGGAAGAAGAAGA...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234956.2
CDS TCA 90 bp CCTTGGAAGCCCTGGAGGTTCCTTTGGGGCACTCCGTACCAGGGCTaGCCCTTCGGAATGTCCATTGACAACGATGGTTACTGGCACTTC +
Preference number: 5 (lower is better)
Translates to: PWKPWRFLWGTPYQG*PFGMSIDNDGYWHF
Trigger: GAAGTGCCAGTAACCATCGTTGTCAATGGACATTCCGAAGGGTCAGCCCTGGTACGGAGTGCCCCAAAGGAACCTCCAGGGCTTCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 90 bp AGTCTCCTCTTGCTGTTGAGCAGCCACAGAGGCCCGGATAGCAGCTaGCACTTCTCGGTCTTCTTCTTCCCTCTTGTACCTCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: SLLLLLSSHRGPDSS*HFSVFFFPLVPPAS
Trigger: GGAAGCTGGAGGTACAAGAGGGAAGAAGAAGACCGAGAAGTGGCAGCTGCTATCCGGGCCTCTGTGGCTGCTCAACAGCAAGAGGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234956.2
CDS CCA 90 bp AGCCCACCTTCTTCTTCTTGCCAACCTTGGCTGAACTCTGGTTGGTaGCTGGTGCCAGCAAAGAAGACACAGCTACCGTGGTGGGCACAC +
Preference number: 5 (lower is better)
Translates to: SPPSSSCQPWLNSGW*LVPAKKTQLPWWAH
Trigger: GTGTGCCCACCACGGTAGCTGTGTCTTCTTTGCTGGCACCAGCCACCAACCAGAGTTCAGCCAAGGTTGGCAAGAAGAAGAAGGTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp GGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTAAGAGCTCATGCTGCTaGCGCATGTGCTGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: GLWTCLTRTLFRPLRPLAKSSCC*RMCCSK
Trigger: CTTGGAGCAGCACATGCGCAAGCAGCATGAGCTCTT...AGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCTCAAAGATCTTGAGGTGCTaGAGGCACAACTTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LQHQWTRSCQLWGYGLASKILRC*RHNLQQ
Trigger: CTGCTGCAAGTTGTGCCTCAAGCACCTCAAGATCTT...TGAGGCAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp TCTGACTCCAGCACCAGTGGACCCGAAGCTGTCAGCTCTGGGGCTATGGACTTGCCCACCTTCTTCTTCTaGCCAACCTTGGCTGAACTC +
Preference number: 5 (lower is better)
Translates to: SDSSTSGPEAVSSGAMDLPTFFF*PTLAEL
Trigger: GAGTTCAGCCAAGGTTGGCAAGAAGAAGAAGGTGGG...CAAGTCCATAGCCCCAGAGCTGACAGCTTCGGGTCCACTGGTGCTGGAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGCGGGGACCGAGGGGCCTaGGAAGCCCTGGAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: LAHSKITRSQTKTDPQPSGDRGA*EALEVP
Trigger: AGGAACCTCCAGGGCTTCCAAGGCCCCTCGGTCCCC...GCTTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS TCA 90 bp CAGAGTCACAGAAGTGGCAGAAGTAGTGGTCTCGGCGCAGGTGCTTaGGCAGCTCGTCATTGTCCAGGTAGCGCTCGTCACAGAACTTAC +
Preference number: 5 (lower is better)
Translates to: QSHRSGRSSGLGAGA*AARHCPGSARHRTY
Trigger: GTAAGTTCTGTGACGAGCGCTACCTGGACAATGACGAGCTGCTCAAGCACCTGCGCCGAGACCACTACTTCTGCCACTTCTGTGACTCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 90 bp ATCTTGAGGTGCTTGAGGCACAACTTGCAGCAGAAGAGCTCATGCTaGTTGCGCATGTGCTGCTCCAAGTCCCCGAAGAGGCTGAAGGGT +
Preference number: 5 (lower is better)
Translates to: ILRCLRHNLQQKSSC*LRMCCSKSPKRLKG
Trigger: ACCCTTCAGCCTCTTCGGGGACTTGGAGCAGCACATGCGCAAGCAGCATGAGCTCTTCTGCTGCAAGTTGTGCCTCAAGCACCTCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 90 bp TTACAGAGTGGATGTCCCCGATGGGATGTATCATCAGGGTCACCCTaGATACGGTGTCGAGCCAGGTCCTTGCGTGAGTACCACTTGCGT +
Preference number: 5 (lower is better)
Translates to: LQSGCPRWDVSSGSP*IRCRARSLREYHLR
Trigger: ACGCAAGTGGTACTCACGCAAGGACCTGGCTCGACACCGTATGCAGGGTGACCCTGATGATACATCCCATCGGGGACATCCACTCTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CCA 90 bp GGTTTCTCTCCCGGAAATTCTCAGGAACTAAGTAGGCTTGTGGTGTaGGTGCTAGCCCGGGTGTTTTCGTGGTGGTGGTGGTGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: GFSPGNSQELSRLVV*VLARVFSWWWWWWL
Trigger: CAACCACCACCACCACCACCACGAAAACACCCGGGCTAGCACCCACACCACAAGCCTACTTAGTTCCTGAGAATTTCCGGGAGAGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS TCA 90 bp CCTTTGGGGCACTCCGTACCAGGGCTGACCCTTCGGAATGTCCATTaGCAACGATGGTTACTGGCACTTCAGCTTTGCTCAAAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: PLGHSVPGLTLRNVH*QRWLLALQLCSKGL
Trigger: AAGCCCCTTTGAGCAAAGCTGAAGTGCCAGTAACCATCGTTGTCAATGGACATTCCGAAGGGTCAGCCCTGGTACGGAGTGCCCCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 90 bp AAGATCTTGAGGTGCTTGAGGCACAACTTGCAGCAGAAGAGCTCATaGTGCTTGCGCATGTGCTGCTCCAAGTCCCCGAAGAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: KILRCLRHNLQQKSS*CLRMCCSKSPKRLK
Trigger: CTTCAGCCTCTTCGGGGACTTGGAGCAGCACATGCGCAAGCAGCATGAGCTCTTCTGCTGCAAGTTGTGCCTCAAGCACCTCAAGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CCA 90 bp CAGCTCGTCATTGTCCAGGTAGCGCTCGTCACAGAACTTACAGAGTaGATGTCCCCGATGGGATGTATCATCAGGGTCACCCTGCATACG +
Preference number: 5 (lower is better)
Translates to: QLVIVQVALVTELTE*MSPMGCIIRVTLHT
Trigger: CGTATGCAGGGTGACCCTGATGATACATCCCATCGGGGACATCCACTCTGTAAGTTCTGTGACGAGCGCTACCTGGACAATGACGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CAGGGTAGACCTTTCCTGATGTCCACCTGGCAGGCCTGGCTAACCAGGAGGCCTATATTTCTTCTCGTGTaGGAGCTGATGGATGGGGAT +
Preference number: 5 (lower is better)
Translates to: QGRPFLMSTWQAWLTRRPIFLLV*ELMDGD
Trigger: ATCCCCATCCATCAGCTCCAACACGAGAAGAAATAT...AGGCCTCCTGGTTAGCCAGGCCTGCCAGGTGGACATCAGGAAAGGTCTACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS TCA 90 bp ATCATCAGGGTCACCCTGCATACGGTGTCGAGCCAGGTCCTTGCGTaGGTACCACTTGCGTTCATAGGTGAAGATCTTGAGGTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: IIRVTLHTVSSQVLA*VPLAFIGEDLEVLE
Trigger: CTCAAGCACCTCAAGATCTTCACCTATGAACGCAAGTGGTACTCACGCAAGGACCTGGCTCGACACCGTATGCAGGGTGACCCTGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTCAGAAGATCTTGAGGTGCTaGAGGCACAACTTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LWTCLTRTLFRPLRPLAQKILRC*RHNLQQ
Trigger: CTGCTGCAAGTTGTGCCTCAAGCACCTCAAGATCTT...CTGAGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CCCTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAAGTCTCCTCTTGCTGTaGAGCAGCCACAGAGGCCCG +
Preference number: 5 (lower is better)
Translates to: PWHIPKSQDHKPRLTLSQSLLLL*SSHRGP
Trigger: CGGGCCTCTGTGGCTGCTCAACAGCAAGAGGAGACT...TTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CCCTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGGGAAGTCTTCCTCCTaGAGCTCAGGGCTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: PWHIPKSQDHKPRLTLSQGKSSS*SSGLGG
Trigger: ACCACCCAGCCCTGAGCTCAAGGAGGAAGACTTCCC...TTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAATATTTCTTCTCGTGTaGGAGCTGATGGATGGGGAT +
Preference number: 5 (lower is better)
Translates to: LGLWTCLTRTLFRPLRPLIFLLV*ELMDGD
Trigger: ATCCCCATCCATCAGCTCCAACACGAGAAGAAATAT...TAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CCCTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAATGTCGAGCCAGGTCCTaGCGTGAGTACCACTTGCGT +
Preference number: 5 (lower is better)
Translates to: PWHIPKSQDHKPRLTLSQCRARS*REYHLR
Trigger: ACGCAAGTGGTACTCACGCAAGGACCTGGCTCGACA...TTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGCTTTGCTGAGGCTTCCTaGGAGCCTGAGCCTTCACCC +
Preference number: 5 (lower is better)
Translates to: LAHSKITRSQTKTDPQPSFAEAS*EPEPSP
Trigger: GGGTGAAGGCTCAGGCTCCAAGGAAGCCTCAGCAAA...GCTTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTGGGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTATGCCACACATTCTTCTaGTTCCTCTTAGATCTGGAG +
Preference number: 5 (lower is better)
Translates to: LGLWTCLTRTLFRPLRPLCHTFF*FLLDLE
Trigger: CTCCAGATCTAAGAGGAACAAGAAGAATGTGTGGCA...TAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp GGGCTATGGACTTGCCTCACGAGAACTCTCTTCAGGCCACTGAGGCCTCTAGCTTGCCACACATTCTTCTaGTTCCTCTTAGATCTGGAG +
Preference number: 5 (lower is better)
Translates to: GLWTCLTRTLFRPLRPLACHTFF*FLLDLE
Trigger: CTCCAGATCTAAGAGGAACAAGAAGAATGTGTGGCA...AGCTAGAGGCCTCAGTGGCCTGAAGAGAGTTCTCGTGAGGCAAGTCCATAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CCCTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAAAGAGCTCATGCTGCTaGCGCATGTGCTGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: PWHIPKSQDHKPRLTLSQKSSCC*RMCCSK
Trigger: CTTGGAGCAGCACATGCGCAAGCAGCATGAGCTCTT...TTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGCGGCTTACAGGACCATTaGCTGAGGCTTCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: LAHSKITRSQTKTDPQPSGLQDH*LRLPWS
Trigger: GCTCCAAGGAAGCCTCAGCAAATGGTCCTGTAAGCC...GCTTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGCGGCTGGGAAGGCTTCTaGGCTTACAGGACCATTTGC +
Preference number: 5 (lower is better)
Translates to: LAHSKITRSQTKTDPQPSGWEGF*AYRTIC
Trigger: GCAAATGGTCCTGTAAGCCAAGAAGCCTTCCCAGCC...GCTTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CCCTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGGTAGGTTCCCTTTCTaGCTGCAGCCGCTATTCCAA +
Preference number: 5 (lower is better)
Translates to: PWHIPKSQDHKPRLTLSQGRFPF*LQPLFQ
Trigger: TTGGAATAGCGGCTGCAGCAAGAAAGGGAACCTACC...TTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGCGGTAGGTTCCCTTTCTaGCTGCAGCCGCTATTCCAA +
Preference number: 5 (lower is better)
Translates to: LAHSKITRSQTKTDPQPSGRFPF*LQPLFQ
Trigger: TTGGAATAGCGGCTGCAGCAAGAAAGGGAACCTACC...GCTTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS-3UTR CAA 90 bp CTGGCACATTCCAAAATCACAAGATCACAAACCAAGACTGACCCTCAGCCAAGCCCCACCTTCTTCTTCTaGCCAACCTTGGCTGAACTC +
Preference number: 5 (lower is better)
Translates to: LAHSKITRSQTKTDPQPSPTFFF*PTLAEL
Trigger: GAGTTCAGCCAAGGTTGGCAAGAAGAAGAAGGTGGG...GCTTGGCTGAGGGTCAGTCTTGGTTTGTGATCTTGTGATTTTGGAATGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CCA 72 bp TCCCTCTTGTACCTCCAGCTTCCCCGGCGGTTCTGCTaGGCTCCACGCCCGCTGGCCCGGCCAGCTCGGCCC +
Preference number: 6 (lower is better)
Translates to: SLLYLQLPRRFC*APRPLARPARP
Trigger: GGGCCGAGCTGGCCGGGCCAGCGGGCGTGGAGCCCAGCAGAACCGCCGGGGAAGCTGGAGGTACAAGAGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234956.2
CDS GCA 72 bp CGGTCTTCTTCTTCCCTCCAGCTTCCCCGGCGGTTCTaGTGGGCTCCACGCCCGCTGGCCCGGCCAGCTCGG +
Preference number: 6 (lower is better)
Translates to: RSSSSLQLPRRF*WAPRPLARPAR
Trigger: CCGAGCTGGCCGGGCCAGCGGGCGTGGAGCCCAGCAGAACCGCCGGGGAAGCTGGAGGGAAGAAGAAGACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047179.7
CDS CCA 72 bp TCTTCTTCTTCCCTCCAGCTTCCCCGGCGGTTCTGCTaGGCTCCACGCCCGCTGGCCCGGCCAGCTCGGCCC +
Preference number: 6 (lower is better)
Translates to: SSSSLQLPRRFC*APRPLARPARP
Trigger: GGGCCGAGCTGGCCGGGCCAGCGGGCGTGGAGCCCAGCAGAACCGCCGGGGAAGCTGGAGGGAAGAAGAAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047179.7
CDS GCA 72 bp TCTTCCCTCTTGTACCTCCAGCTTCCCCGGCGGTTCTaGTGGGCTCCACGCCCGCTGGCCCGGCCAGCTCGG +
Preference number: 6 (lower is better)
Translates to: SSLLYLQLPRRF*WAPRPLARPAR
Trigger: CCGAGCTGGCCGGGCCAGCGGGCGTGGAGCCCAGCAGAACCGCCGGGGAAGCTGGAGGTACAAGAGGGAAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234956.2
CDS CCA 72 bp GCAGACGCCGGTGGCCACGGGGTTCCTCAGGCACCCTaGCTGCGGCTTCCTCTTTCTTGGGCCTGCTACCCT +
Preference number: 6 (lower is better)
Translates to: ADAGGHGVPQAP*LRLPLSWACYP
Trigger: AGGGTAGCAGGCCCAAGAAAGAGGAAGCCGCAGCCAGGGTGCCTGAGGAACCCCGTGGCCACCGGCGTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS TCA 72 bp TTTGCTGAGGCTTCCTTGGAGCCTGAGCCTTCACCCTaGGCCCGAGGCAGACGCCGGTGGCCACGGGGTTCC +
Preference number: 6 (lower is better)
Translates to: FAEASLEPEPSP*ARGRRRWPRGS
Trigger: GGAACCCCGTGGCCACCGGCGTCTGCCTCGGGCTCAGGGTGAAGGCTCAGGCTCCAAGGAAGCCTCAGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS TCA 72 bp CTACCGTGGTGGGCACACTCCGCAGCCCCTGCACAGTaGGGCCACCGCTATCCTCCTCATCCACTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: LPWWAHSAAPAQ*GHRYPPHPLGL
Trigger: CAGCCCCAGTGGATGAGGAGGATAGCGGTGGCCTCACTGTGCAGGGGCTGCGGAGTGTGCCCACCACGGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CCA 72 bp CTGCACAGTGAGGCCACCGCTATCCTCCTCATCCACTaGGGCTGGGCCACCCTTTCTGCCACCCCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: LHSEATAILLIH*GWATLSATPAP
Trigger: GGGAGCAGGGGTGGCAGAAAGGGTGGCCCAGCCCCAGTGGATGAGGAGGATAGCGGTGGCCTCACTGTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CCA 72 bp GCTGGCTGCCACCAACCACAGCCTGGGACCCCGGGGTaGGTAGGTTCCCTTTCTTGCTGCAGCCGCTATTCC +
Preference number: 6 (lower is better)
Translates to: AGCHQPQPGTPG*VGSLSCCSRYS
Trigger: GGAATAGCGGCTGCAGCAAGAAAGGGAACCTACCCACCCCGGGGTCCCAGGCTGTGGTTGGTGGCAGCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 72 bp CAGGCACCCTGGCTGCGGCTTCCTCTTTCTTGGGCCTaGTACCCTCCTCCCGGTCCTCAACCCTCTGAGTCT +
Preference number: 6 (lower is better)
Translates to: QAPWLRLPLSWA*YPPPGPQPSES
Trigger: AGACTCAGAGGGTTGAGGACCGGGAGGAGGGTAGCAGGCCCAAGAAAGAGGAAGCCGCAGCCAGGGTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CAA 90 bp GCTACCCTCCTCCCGGTCCTCAACCCTCTGAGTCTCCTCTTGCTGTaGAGCAGCCACAGAGGCCCGGATAGCAGCTGCCACTTCTCGGTC +
Preference number: 6 (lower is better)
Translates to: ATLLPVLNPLSLLLL*SSHRGPDSSCHFSV
Trigger: GACCGAGAAGTGGCAGCTGCTATCCGGGCCTCTGTGGCTGCTCAACAGCAAGAGGAGACTCAGAGGGTTGAGGACCGGGAGGAGGGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CAA 90 bp GGCCTGGGCCTGTGGCTGGGAAGGCTTCTTGGCTTACAGGACCATTaGCTGAGGCTTCCTTGGAGCCTGAGCCTTCACCCTGAGCCCGAG +
Preference number: 6 (lower is better)
Translates to: GLGLWLGRLLGLQDH*LRLPWSLSLHPEPE
Trigger: CTCGGGCTCAGGGTGAAGGCTCAGGCTCCAAGGAAGCCTCAGCAAATGGTCCTGTAAGCCAAGAAGCCTTCCCAGCCACAGGCCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CAA 72 bp CTCCCGGTCCTCAACCCTCTGAGTCTCCTCTTGCTGTaGAGCAGCCACAGAGGCCCGGATAGCAGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: LPVLNPLSLLLL*SSHRGPDSSCH
Trigger: GTGGCAGCTGCTATCCGGGCCTCTGTGGCTGCTCAACAGCAAGAGGAGACTCAGAGGGTTGAGGACCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CAA 72 bp ACCCTCCTCCCGGTCCTCAACCCTCTGAGTCTCCTCTaGCTGTTGAGCAGCCACAGAGGCCCGGATAGCAGC +
Preference number: 6 (lower is better)
Translates to: TLLPVLNPLSLL*LLSSHRGPDSS
Trigger: GCTGCTATCCGGGCCTCTGTGGCTGCTCAACAGCAAGAGGAGACTCAGAGGGTTGAGGACCGGGAGGAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS TCA 72 bp TCACTCCGGCGTGAGTGCCGTGGTGCAAAGCTAAACTaGAGGTCAATCTGCCGGTTCTGGCGTGCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: SLRRECRGAKLN*RSICRFWRASA
Trigger: GGCCGAGGCACGCCAGAACCGGCAGATTGACCTTCAGTTTAGCTTTGCACCACGGCACTCACGCCGGAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS TCA 72 bp GATTGTACCTGTCCACCTCCTCGTAGTCCTCACCACTaGCGACTCCCTCACTCCGGCGTGAGTGCCGTGGTG +
Preference number: 6 (lower is better)
Translates to: DCTCPPPRSPHH*RLPHSGVSAVV
Trigger: CACCACGGCACTCACGCCGGAGTGAGGGAGTCGTCAGTGGTGAGGACTACGAGGAGGTGGACAGGTACAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 72 bp GGTGTTCTTGCCCCTGGGAGGACCAGGATAAGCCAGTaGCAAGCCTACAGAGCCTGGGGTAACCGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: GVLAPGRTRISQ*QAYRAWGNRCA
Trigger: TGCACAGCGGTTACCCCAGGCTCTGTAGGCTTGGCACTGGCTTATCCTGGTCCTCCCAGGGGCAAGAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS TCA 72 bp TCCCTTTCTTGCTGCAGCCGCTATTCCAAGCTGAGATaGGACTGGAAGGGGCACTGCTGGGCTTGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: SLSCCSRYSKLR*DWKGHCWAWVR
Trigger: CCGCACCCAAGCCCAGCAGTGCCCCTTCCAGTCTCATCTCAGCTTGGAATAGCGGCTGCAGCAAGAAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS TCA 72 bp AGAAGTGGCAGAAGTAGTGGTCTCGGCGCAGGTGCTTaGGCAGCTCGTCATTGTCCAGGTAGCGCTCGTCAC +
Preference number: 6 (lower is better)
Translates to: RSGRSSGLGAGA*AARHCPGSARH
Trigger: GTGACGAGCGCTACCTGGACAATGACGAGCTGCTCAAGCACCTGCGCCGAGACCACTACTTCTGCCACTTCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 72 bp AACTTGCAGCAGAAGAGCTCATGCTGCTTGCGCATGTaGTGCTCCAAGTCCCCGAAGAGGCTGAAGGGTGGC +
Preference number: 6 (lower is better)
Translates to: NLQQKSSCCLRM*CSKSPKRLKGG
Trigger: GCCACCCTTCAGCCTCTTCGGGGACTTGGAGCAGCACATGCGCAAGCAGCATGAGCTCTTCTGCTGCAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 72 bp GGATGTCCCCGATGGGATGTATCATCAGGGTCACCCTaGATACGGTGTCGAGCCAGGTCCTTGCGTGAGTAC +
Preference number: 6 (lower is better)
Translates to: GCPRWDVSSGSP*IRCRARSLREY
Trigger: GTACTCACGCAAGGACCTGGCTCGACACCGTATGCAGGGTGACCCTGATGATACATCCCATCGGGGACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 72 bp AAAGCTAAACTGAAGGTCAATCTGCCGGTTCTGGCGTaGCTCGGCCCGGCTGCGGCTGTGGCAAGCTGTTTT +
Preference number: 6 (lower is better)
Translates to: KAKLKVNLPVLA*LGPAAAVASCF
Trigger: AAAACAGCTTGCCACAGCCGCAGCCGGGCCGAGGCACGCCAGAACCGGCAGATTGACCTTCAGTTTAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 72 bp CCAAGGCAGGAAAGTCCTCTTCCTGGAAGGTGTTCTTaGCCCTGGGAGGACCAGGATAAGCCAGTGCCAAGC +
Preference number: 6 (lower is better)
Translates to: PRQESPLPGRCS*PWEDQDKPVPS
Trigger: GCTTGGCACTGGCTTATCCTGGTCCTCCCAGGGGCAAGAACACCTTCCAGGAAGAGGACTTTCCTGCCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS TCA 72 bp CCCTGGAGGTTCCTTTGGGGCACTCCGTACCAGGGCTaGCCCTTCGGAATGTCCATTGACAACGATGGTTAC +
Preference number: 6 (lower is better)
Translates to: PWRFLWGTPYQG*PFGMSIDNDGY
Trigger: GTAACCATCGTTGTCAATGGACATTCCGAAGGGTCAGCCCTGGTACGGAGTGCCCCAAAGGAACCTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 72 bp TGCTTGAGGCACAACTTGCAGCAGAAGAGCTCATGCTaGTTGCGCATGTGCTGCTCCAAGTCCCCGAAGAGG +
Preference number: 6 (lower is better)
Translates to: CLRHNLQQKSSC*LRMCCSKSPKR
Trigger: CCTCTTCGGGGACTTGGAGCAGCACATGCGCAAGCAGCATGAGCTCTTCTGCTGCAAGTTGTGCCTCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 72 bp AGGTGCTTGAGGCACAACTTGCAGCAGAAGAGCTCATaGTGCTTGCGCATGTGCTGCTCCAAGTCCCCGAAG +
Preference number: 6 (lower is better)
Translates to: RCLRHNLQQKSS*CLRMCCSKSPK
Trigger: CTTCGGGGACTTGGAGCAGCACATGCGCAAGCAGCATGAGCTCTTCTGCTGCAAGTTGTGCCTCAAGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CCA 72 bp CAGGAAAGTCCTCTTCCTGGAAGGTGTTCTTGCCCCTaGGAGGACCAGGATAAGCCAGTGCCAAGCCTACAG +
Preference number: 6 (lower is better)
Translates to: QESPLPGRCSCP*EDQDKPVPSLQ
Trigger: CTGTAGGCTTGGCACTGGCTTATCCTGGTCCTCCCAGGGGCAAGAACACCTTCCAGGAAGAGGACTTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CAA 90 bp TCCTTTGGGGCACTCCGTACCAGGGCTGACCCTTCGGAATGTCCATaGACAACGATGGTTACTGGCACTTCAGCTTTGCTCAAAGGGGCT +
Preference number: 6 (lower is better)
Translates to: SFGALRTRADPSECP*TTMVTGTSALLKGA
Trigger: AGCCCCTTTGAGCAAAGCTGAAGTGCCAGTAACCATCGTTGTCAATGGACATTCCGAAGGGTCAGCCCTGGTACGGAGTGCCCCAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS TCA 72 bp GTCACCCTGCATACGGTGTCGAGCCAGGTCCTTGCGTaGGTACCACTTGCGTTCATAGGTGAAGATCTTGAG +
Preference number: 6 (lower is better)
Translates to: VTLHTVSSQVLA*VPLAFIGEDLE
Trigger: CTCAAGATCTTCACCTATGAACGCAAGTGGTACTCACGCAAGGACCTGGCTCGACACCGTATGCAGGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CCA 72 bp CGCTCGTCACAGAACTTACAGAGTGGATGTCCCCGATaGGATGTATCATCAGGGTCACCCTGCATACGGTGT +
Preference number: 6 (lower is better)
Translates to: RSSQNLQSGCPR*DVSSGSPCIRC
Trigger: ACACCGTATGCAGGGTGACCCTGATGATACATCCCATCGGGGACATCCACTCTGTAAGTTCTGTGACGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CCA 72 bp TCTTCTTCTTGCCAACCTTGGCTGAACTCTGGTTGGTaGCTGGTGCCAGCAAAGAAGACACAGCTACCGTGG +
Preference number: 6 (lower is better)
Translates to: SSSCQPWLNSGW*LVPAKKTQLPW
Trigger: CCACGGTAGCTGTGTCTTCTTTGCTGGCACCAGCCACCAACCAGAGTTCAGCCAAGGTTGGCAAGAAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CCA 72 bp CCTTCTTCTTCTTGCCAACCTTGGCTGAACTCTGGTTaGTGGCTGGTGCCAGCAAAGAAGACACAGCTACCG +
Preference number: 6 (lower is better)
Translates to: PSSSCQPWLNSG*WLVPAKKTQLP
Trigger: CGGTAGCTGTGTCTTCTTTGCTGGCACCAGCCACCAACCAGAGTTCAGCCAAGGTTGGCAAGAAGAAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CCA 72 bp ATTGTCCAGGTAGCGCTCGTCACAGAACTTACAGAGTaGATGTCCCCGATGGGATGTATCATCAGGGTCACC +
Preference number: 6 (lower is better)
Translates to: IVQVALVTELTE*MSPMGCIIRVT
Trigger: GGTGACCCTGATGATACATCCCATCGGGGACATCCACTCTGTAAGTTCTGTGACGAGCGCTACCTGGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CAA 72 bp TTGCTGAAGCAGGCCTCATCGCTTTGCAGAAAGTCCTaGATAGACTGGATAAGCTGCAGGTTTCTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: LLKQASSLCRKS*IDWISCRFLSR
Trigger: CCGGGAGAGAAACCTGCAGCTTATCCAGTCTATCAAGGACTTTCTGCAAAGCGATGAGGCCTGCTTCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CAA 72 bp CCCAACTGTTGGGTGCTGGTCTGCCACACATTCTTCTaGTTCCTCTTAGATCTGGAGTTGGGAGGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: PNCWVLVCHTFF*FLLDLELGGFS
Trigger: TGAGAAGCCTCCCAACTCCAGATCTAAGAGGAACAAGAAGAATGTGTGGCAGACCAGCACCCAACAGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS GCA 72 bp TGGCTTTTAAACTTGCTGAAGCAGGCCTCATCGCTTTaGAGAAAGTCCTTGATAGACTGGATAAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: WLLNLLKQASSL*RKSLIDWISCR
Trigger: CCTGCAGCTTATCCAGTCTATCAAGGACTTTCTGCAAAGCGATGAGGCCTGCTTCAGCAAGTTTAAAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CAA 90 bp CTTTTAAACTTGCTGAAGCAGGCCTCATCGCTTTGCAGAAAGTCCTaGATAGACTGGATAAGCTGCAGGTTTCTCTCCCGGAAATTCTCA +
Preference number: 6 (lower is better)
Translates to: LLNLLKQASSLCRKS*IDWISCRFLSRKFS
Trigger: TGAGAATTTCCGGGAGAGAAACCTGCAGCTTATCCAGTCTATCAAGGACTTTCTGCAAAGCGATGAGGCCTGCTTCAGCAAGTTTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2
CDS CAA 72 bp ATGGCTTTTAAACTTGCTGAAGCAGGCCTCATCGCTTaGCAGAAAGTCCTTGATAGACTGGATAAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: MAFKLAEAGLIA*QKVLDRLDKLQ
Trigger: CTGCAGCTTATCCAGTCTATCAAGGACTTTCTGCAAAGCGATGAGGCCTGCTTCAGCAAGTTTAAAAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047179.7
ENSMUST00000234956.2