Pregenerated sensors for ZFP597 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039789Ensembl transcript IDs: ENSMUST00000090522.5
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACTTTTAATCCCAGCAACTCAAGGCAGAGGCAGGCAGATGTCTTaGGTTGAGGCTAGCCTGGTCTACAGAGCCAGGCCCAGGACAGCT | + |
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Preference number: 1 (lower is better) Translates to: TLLIPATQGRGRQMS*VEASLVYRARPRTA Trigger: AGCTGTCCTGGGCCTGGCTCTGTAGACCAGGCTAGCCTCAACTCAAGACATCTGCCTGCCTCTGCCTTGAGTTGCTGGGATTAAAAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR TCA 90 bp | ACCTGGACATGGTGGCATATACCAGTAATGTTAGCACGTGGAAGATaGATACAGGAAAATGATGATTTTGAGGCCAGCCTGGGCTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: TWTWWHIPVMLARGR*IQENDDFEASLGSL Trigger: CAGGGAGCCCAGGCTGGCCTCAAAATCATCATTTTCCTGTATTCATCTTCCACGTGCTAACATTACTGGTATATGCCACCATGTCCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR TCA 90 bp | CGAGACTACCTTTCTATACAATTCAAAGCATCTCTGACAGAGGGCTaGAGAGCCCTGAAAGCCATTAAGACGCCCAACTCCCTGACAGAA | + |
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Preference number: 1 (lower is better) Translates to: RDYLSIQFKASLTEG*RALKAIKTPNSLTE Trigger: TTCTGTCAGGGAGTTGGGCGTCTTAATGGCTTTCAGGGCTCTTCAGCCCTCTGTCAGAGATGCTTTGAATTGTATAGAAAGGTAGTCTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR CCA 90 bp | TTTAAGAGCAATGAAATAAAGCTCTGGATAAAACAAAGGCCACAATaGGCTCCAGGCAGTAAGTCCCAGGGCAGCCTCCATAAGGACTGT | + |
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Preference number: 1 (lower is better) Translates to: FKSNEIKLWIKQRPQ*APGSKSQGSLHKDC Trigger: ACAGTCCTTATGGAGGCTGCCCTGGGACTTACTGCCTGGAGCCCATTGTGGCCTTTGTTTTATCCAGAGCTTTATTTCATTGCTCTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR GCA 90 bp | ATCAGATGTGATAATACTGAAACATTCCATGGAATGTGTGTAAAGTaGTTGCTTAGCACAGTGCCCTGTGCACTGCAGTGTTTACCACCA | + |
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Preference number: 1 (lower is better) Translates to: IRCDNTETFHGMCVK*LLSTVPCALQCLPP Trigger: TGGTGGTAAACACTGCAGTGCACAGGGCACTGTGCTAAGCAAGCACTTTACACACATTCCATGGAATGTTTCAGTATTATCACATCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR CCA 90 bp | GCTGGCTGTCTTCAGTGTTATAGAGACAGATGGACAAATTATTTTTaGCAGCACAAAACTAATTTGTGTTCTACTCCTTCAACAACAAAA | + |
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Preference number: 1 (lower is better) Translates to: AGCLQCYRDRWTNYF*QHKTNLCSTPSTTK Trigger: TTTTGTTGTTGAAGGAGTAGAACACAAATTAGTTTTGTGCTGCCAAAAATAATTTGTCCATCTGTCTCTATAACACTGAAGACAGCCAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGTCTACAGAGCCAGGCCCAGGACAGCTAGAGCTCCACAGAAAAACCCTGGGACAGGATGACAGATaGGGCAAGGCTGTCGACTTC | + |
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Preference number: 2 (lower is better) Translates to: AWSTEPGPGQLELHRKTLGQDDR*GKAVDF Trigger: GAAGTCGACAGCCTTGCCTCATCTGTCATCCTGTCC...CAGGGTTTTTCTGTGGAGCTCTAGCTGTCCTGGGCCTGGCTCTGTAGACCAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGTCTACAGAGCCAGGCCCAGGACAGCTAGAGCTCCACAGAAAAACCCTGACTACCTGGACATGGTaGCATATACCAGTAATGTTA | + |
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Preference number: 2 (lower is better) Translates to: AWSTEPGPGQLELHRKTLTTWTW*HIPVML Trigger: TAACATTACTGGTATATGCCACCATGTCCAGGTAGT...CAGGGTTTTTCTGTGGAGCTCTAGCTGTCCTGGGCCTGGCTCTGTAGACCAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGTCTACAGAGCCAGGCCCAGGACAGCTAGAGCTCCACAGAAAAACCCTGTTAACTACCTGGACATaGTGGCATATACCAGTAATG | + |
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Preference number: 2 (lower is better) Translates to: AWSTEPGPGQLELHRKTLLTTWT*WHIPVM Trigger: CATTACTGGTATATGCCACCATGTCCAGGTAGTTAA...CAGGGTTTTTCTGTGGAGCTCTAGCTGTCCTGGGCCTGGCTCTGTAGACCAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR TCA 90 bp | AACCAGCCAAATCTGACCTTGACATACAGGGCATACAGTCTCAACTGTGGATCAACAGCCAGGACAGGATaGCAGATGAGGCAAGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: NQPNLTLTYRAYSLNCGSTARTG*QMRQGC Trigger: ACAGCCTTGCCTCATCTGTCATCCTGTCCTGGCTGT...TGATCCACAGTTGAGACTGTATGCCCTGTATGTCAAGGTCAGATTTGGCTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR GCA 90 bp | CTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACGTTGACAGTGTCAGGACCGCTTGCTTAGCACAGTaGCCTGTGCACTGCAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: LRKEQVLPVKSNVDSVRTACLAQ*PVHCSV Trigger: AACACTGCAGTGCACAGGGCACTGTGCTAAGCAAGC...GGTCCTGACACTGTCAACGTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR TCA 90 bp | GCCACTGGCCTTCAAGAGGGCTTTTTGTTCATGAAATTTCCCAGCAGTAATTCTCTGGGATTAAAGGTGTaGGCCACCATACCCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: ATGLQEGFLFMKFPSSNSLGLKV*ATIPSS Trigger: ACTGCTGGGTATGGTGGCTCACACCTTTAATCCCAG...AGAATTACTGCTGGGAAATTTCATGAACAAAAAGCCCTCTTGAAGGCCAGTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR CCA 90 bp | GCCACTGGCCTTCAAGAGGGCTTTTTGTTCATGAAATTTCCCAGCAGTAATTCTTGGAATGTGCTTCAGTaGGATCTGGAGGAAAACCCC | + |
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Preference number: 2 (lower is better) Translates to: ATGLQEGFLFMKFPSSNSWNVLQ*DLEENP Trigger: GGGGTTTTCCTCCAGATCCCACTGAAGCACATTCCA...AGAATTACTGCTGGGAAATTTCATGAACAAAAAGCCCTCTTGAAGGCCAGTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR TCA 90 bp | GATCTGGAGGAAAACCCCCTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACACTGGGTTCAAATCCTaGCTTCACATACTATCTATG | + |
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Preference number: 2 (lower is better) Translates to: DLEENPLRKEQVLPVKSNTGFKS*LHILSM Trigger: CATAGATAGTATGTGAAGTCAGGATTTGAACCCAGT...GTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAGGGGGTTTTCCTCCAGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR TCA 90 bp | GATCTGGAGGAAAACCCCCTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACTTAGCACGTGGAAGATaGATACAGGAAAATGATGAT | + |
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Preference number: 2 (lower is better) Translates to: DLEENPLRKEQVLPVKSNLARGR*IQENDD Trigger: ATCATCATTTTCCTGTATTCATCTTCCACGTGCTAA...GTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAGGGGGTTTTCCTCCAGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR CCA 90 bp | GATCTGGAGGAAAACCCCCTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACAATTTGATCAGTAACTaGGTTCAAATCCTGACTTCA | + |
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Preference number: 2 (lower is better) Translates to: DLEENPLRKEQVLPVKSNNLISN*VQILTS Trigger: TGAAGTCAGGATTTGAACCCAGTTACTGATCAAATT...GTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAGGGGGTTTTCCTCCAGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR CCA 90 bp | GCCACTGGCCTTCAAGAGGGCTTTTTGTTCATGAAATTTCCCAGCAGTAATTCTCTATGTAGACTAGGCTaGTCTTTACATCACAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: ATGLQEGFLFMKFPSSNSLCRLG*SLHHRN Trigger: ATTTCTGTGATGTAAAGACCAGCCTAGTCTACATAG...AGAATTACTGCTGGGAAATTTCATGAACAAAAAGCCCTCTTGAAGGCCAGTGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR CAA 90 bp | CCAGTTACTTACTACGTTGCAGCCACTGGCCTTCAAGAGGGCTTTTaGTTCATGAAATTTCCCAGCAGTAATTCTATTTTAATAAATACT | + |
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Preference number: 2 (lower is better) Translates to: PVTYYVAATGLQEGF*FMKFPSSNSILINT Trigger: AGTATTTATTAAAATAGAATTACTGCTGGGAAATTTCATGAACAAAAAGCCCTCTTGAAGGCCAGTGGCTGCAACGTAGTAAGTAACTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR TCA 72 bp | ATCCCAGCAACTCAAGGCAGAGGCAGGCAGATGTCTTaGGTTGAGGCTAGCCTGGTCTACAGAGCCAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: IPATQGRGRQMS*VEASLVYRARP Trigger: GGGCCTGGCTCTGTAGACCAGGCTAGCCTCAACTCAAGACATCTGCCTGCCTCTGCCTTGAGTTGCTGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR CAA 90 bp | GCCTGGTCTACAGAGCCAGGCCCAGGACAGCTAGAGCTCCACAGAAAAACCCTGAGGAAAATGATGATTTaGAGGCCAGCCTGGGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: AWSTEPGPGQLELHRKTLRKMMI*RPAWAP Trigger: GGGAGCCCAGGCTGGCCTCAAAATCATCATTTTCCT...CAGGGTTTTTCTGTGGAGCTCTAGCTGTCCTGGGCCTGGCTCTGTAGACCAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR CCA 72 bp | GGGCATACAGTCTCAACTGTGGATCAGCTGAAACAGTaGCCTCTAGGAGGGGGCAACAGCCAGGACAGGATG | + |
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Preference number: 3 (lower is better) Translates to: GHTVSTVDQLKQ*PLGGGNSQDRM Trigger: CATCCTGTCCTGGCTGTTGCCCCCTCCTAGAGGCCACTGTTTCAGCTGATCCACAGTTGAGACTGTATGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR CAA 90 bp | GCCTGGTCTACAGAGCCAGGCCCAGGACAGCTAGAGCTCCACAGAAAAACCCTGATAGCAGTTCCTCCCTaGAGAAGCAAGAGTAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: AWSTEPGPGQLELHRKTLIAVPP*RSKSRK Trigger: CTTCCTACTCTTGCTTCTCAAGGGAGGAACTGCTAT...CAGGGTTTTTCTGTGGAGCTCTAGCTGTCCTGGGCCTGGCTCTGTAGACCAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR TCA 72 bp | TCTAGGAGGGGGCAACAGCCAGGACAGGATGACAGATaGGGCAAGGCTGTCGACTTCAGTTTATCTCACTCA | + |
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Preference number: 3 (lower is better) Translates to: SRRGQQPGQDDR*GKAVDFSLSHS Trigger: TGAGTGAGATAAACTGAAGTCGACAGCCTTGCCTCATCTGTCATCCTGTCCTGGCTGTTGCCCCCTCCTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR CAA 90 bp | GCCTGGTCTACAGAGCCAGGCCCAGGACAGCTAGAGCTCCACAGAAAAACCCTGCATGAAGTTCTCCATTaGTACTTCTATAGAAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: AWSTEPGPGQLELHRKTLHEVLH*YFYRRD Trigger: GTCTCTTCTATAGAAGTACAAATGGAGAACTTCATG...CAGGGTTTTTCTGTGGAGCTCTAGCTGTCCTGGGCCTGGCTCTGTAGACCAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR CAA 90 bp | GCCTGGTCTACAGAGCCAGGCCCAGGACAGCTAGAGCTCCACAGAAAAACCCTGATTTTCTCATTTCTTTaGGTGCCAACTCTCATGAGT | + |
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Preference number: 3 (lower is better) Translates to: AWSTEPGPGQLELHRKTLIFSFL*VPTLMS Trigger: ACTCATGAGAGTTGGCACCAAAAGAAATGAGAAAAT...CAGGGTTTTTCTGTGGAGCTCTAGCTGTCCTGGGCCTGGCTCTGTAGACCAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR CCA 72 bp | TTCCATGTTAAGATGTACAGCAAGGCTGGGCAGTGGTaGCGCACACTTTTAATCCCAGCAACTCAAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: FHVKMYSKAGQW*RTLLIPATQGR Trigger: TCTGCCTTGAGTTGCTGGGATTAAAAGTGTGCGCCACCACTGCCCAGCCTTGCTGTACATCTTAACATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR CCA 72 bp | GAATTCCATGTTAAGATGTACAGCAAGGCTGGGCAGTaGTGGCGCACACTTTTAATCCCAGCAACTCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: EFHVKMYSKAGQ*WRTLLIPATQG Trigger: GCCTTGAGTTGCTGGGATTAAAAGTGTGCGCCACCACTGCCCAGCCTTGCTGTACATCTTAACATGGAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR CCA 72 bp | AATGAAATAAAGCTCTGGATAAAACAAAGGCCACAATaGGCTCCAGGCAGTAAGTCCCAGGGCAGCCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: NEIKLWIKQRPQ*APGSKSQGSLH Trigger: ATGGAGGCTGCCCTGGGACTTACTGCCTGGAGCCCATTGTGGCCTTTGTTTTATCCAGAGCTTTATTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR-3UTR CAA 90 bp | CTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACGTTGACAGTGTCAGGACCATGTGTGTAAAGTGCTaGCTTAGCACAGTGCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LRKEQVLPVKSNVDSVRTMCVKC*LSTVPC Trigger: ACAGGGCACTGTGCTAAGCAAGCACTTTACACACAT...GGTCCTGACACTGTCAACGTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR TCA 72 bp | CTTTCTATACAATTCAAAGCATCTCTGACAGAGGGCTaGAGAGCCCTGAAAGCCATTAAGACGCCCAACTCC | + |
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Preference number: 3 (lower is better) Translates to: LSIQFKASLTEG*RALKAIKTPNS Trigger: GGAGTTGGGCGTCTTAATGGCTTTCAGGGCTCTTCAGCCCTCTGTCAGAGATGCTTTGAATTGTATAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR CCA 72 bp | CCTTGGTTTGATTGGCACACACTATGTAGACTAGGCTaGTCTTTACATCACAGAAATCCTGTCTCTGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: PWFDWHTLCRLG*SLHHRNPVSAA Trigger: GGCAGCAGAGACAGGATTTCTGTGATGTAAAGACCAGCCTAGTCTACATAGTGTGTGCCAATCAAACCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR CCA 72 bp | CTCCCCACTTCCTTGTCTCTTAGTAGGATTAACATGTaGCACAAACACCAACAGCGAGTAGTGCAATGTCAC | + |
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Preference number: 3 (lower is better) Translates to: LPTSLSLSRINM*HKHQQRVVQCH Trigger: GTGACATTGCACTACTCGCTGTTGGTGTTTGTGCCACATGTTAATCCTACTAAGAGACAAGGAAGTGGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR GCA 72 bp | GAAGTAGTTCTAACTATTCATAACCAGCCTGGAATGTaGTTCAGTGGGATCTGGAGGAAAACCCCCTTAGAA | + |
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Preference number: 3 (lower is better) Translates to: EVVLTIHNQPGM*FSGIWRKTPLE Trigger: TTCTAAGGGGGTTTTCCTCCAGATCCCACTGAAGCACATTCCAGGCTGGTTATGAATAGTTAGAACTACTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR TCA 72 bp | TGGTGGCATATACCAGTAATGTTAGCACGTGGAAGATaGATACAGGAAAATGATGATTTTGAGGCCAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: WWHIPVMLARGR*IQENDDFEASL Trigger: CAGGCTGGCCTCAAAATCATCATTTTCCTGTATTCATCTTCCACGTGCTAACATTACTGGTATATGCCACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR GCA 72 bp | TTAAATGAATATGCTGTATCTTCTTCCTCTCTAAACTaGGCTTGTAGACAAGGGTCTCAATTTGAAGAGACA | + |
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Preference number: 3 (lower is better) Translates to: LNEYAVSSSSLN*ACRQGSQFEET Trigger: TGTCTCTTCAAATTGAGACCCTTGTCTACAAGCGCAGTTTAGAGAGGAAGAAGATACAGCATATTCATTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR CCA 72 bp | CTTCATAACATCAACATTCCTTGTACAACATGTAGATaGCTAACCATTCATAGCAACAGGCTTTTACATTCC | + |
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Preference number: 3 (lower is better) Translates to: LHNINIPCTTCR*LTIHSNRLLHS Trigger: GGAATGTAAAAGCCTGTTGCTATGAATGGTTAGCCATCTACATGTTGTACAAGGAATGTTGATGTTATGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR CCA 72 bp | AATTTTACAGTTTTATGCTTCCCTGGCTCATATAAATaGAATTTGATCAGTAACTGGGTTCAAATCCTGACT | + |
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Preference number: 3 (lower is better) Translates to: NFTVLCFPGSYK*NLISNWVQILT Trigger: AGTCAGGATTTGAACCCAGTTACTGATCAAATTCCATTTATATGAGCCAGGGAAGCATAAAACTGTAAAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR CAA 72 bp | CAGCAACTCAAGGCAGAGGCAGGCAGATGTCTTGAGTaGAGGCTAGCCTGGTCTACAGAGCCAGGCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: QQLKAEAGRCLE*RLAWSTEPGPG Trigger: TCCTGGGCCTGGCTCTGTAGACCAGGCTAGCCTCAACTCAAGACATCTGCCTGCCTCTGCCTTGAGTTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR GCA 90 bp | AAGTGCTTGCTTAGCACAGTGCCCTGTGCACTGCAGTGTTTACCACCACACAGAGTAGGGTCTGAGGGCTaGTCCAAGGTCTTCACACAG | + |
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Preference number: 4 (lower is better) Translates to: KCLLSTVPCALQCLPPHRVGSEG*SKVFTQ Trigger: CTGTGTGAAGACCTTGGAGCAGCCCTCAGACCCTAC...TCTGTGTGGTGGTAAACACTGCAGTGCACAGGGCACTGTGCTAAGCAAGCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR TCA 90 bp | CCCCTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACGTTGACAGTGTCAGGCTGCTGAGGGTCTTCTaGGCAGGGTGCAGACTCACA | + |
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Preference number: 4 (lower is better) Translates to: PLRKEQVLPVKSNVDSVRLLRVF*AGCRLT Trigger: TGTGAGTCTGCACCCTGCTCAGAAGACCCTCAGCAG...CCTGACACTGTCAACGTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR TCA 90 bp | AAGTGCTTGCTTAGCACAGTGCCCTGTGCACTGCAGTGTTTACCACCACACAGATCGAGGCTCAACTCCTaGCTGCTTTCAGTCTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: KCLLSTVPCALQCLPPHRSRLNS*LLSVWS Trigger: AGACCAGACTGAAAGCAGTCAGGAGTTGAGCCTCGA...TCTGTGTGGTGGTAAACACTGCAGTGCACAGGGCACTGTGCTAAGCAAGCACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR TCA 90 bp | CCCCTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACGTTGACAGTGTCAGGAGGGAGAGTAGGGTCTaGGGGCTGCTCCAAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: PLRKEQVLPVKSNVDSVRRESRV*GLLQGL Trigger: AAGACCTTGGAGCAGCCCTCAGACCCTACTCTCCCT...CCTGACACTGTCAACGTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CCA 90 bp | CTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACGTTGACAGTGTCAGGACCACTGCTGTCGGAAGCTaGCAGCACACTCGGTACACT | + |
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Preference number: 4 (lower is better) Translates to: LRKEQVLPVKSNVDSVRTTAVGS*QHTRYT Trigger: AGTGTACCGAGTGTGCTGCCAGCTTCCGACAGCAGT...GGTCCTGACACTGTCAACGTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR TCA 90 bp | CTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACGTTGACAGTGTCAGGACCCTCAGGTTGGTTCGGTaGCTGAAGGTCTTCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: LRKEQVLPVKSNVDSVRTLRLVR*LKVFSQ Trigger: CTGTGAGAAGACCTTCAGTCACCGAACCAACCTGAG...GGTCCTGACACTGTCAACGTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR GCA 90 bp | CCCCTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACGTTGACAGTGTCAGGTTCACACAGTGTGTGTaGTGGGGCAGTGTGTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: PLRKEQVLPVKSNVDSVRFTQCV*WGSVSD Trigger: ATCAGACACACTGCCCCAGCACACACACTGTGTGAA...CCTGACACTGTCAACGTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CCA 90 bp | AAGTGCTTGCTTAGCACAGTGCCCTGTGCACTGCAGTGTTTACCACCACACAGAATGTTCTGCCAATCCTaGGAGCCACATAAAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: KCLLSTVPCALQCLPPHRMFCQS*EPHKTS Trigger: AGAGGTTTTATGTGGCTCCCAGGATTGGCAGAACAT...TCTGTGTGGTGGTAAACACTGCAGTGCACAGGGCACTGTGCTAAGCAAGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CCA 90 bp | AAGTGCTTGCTTAGCACAGTGCCCTGTGCACTGCAGTGTTTACCACCACACAGATTCGAGTCCTCCTTATaGTCTTTCTCAGGGAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: KCLLSTVPCALQCLPPHRFESSL*SFSGRV Trigger: TACTCTCCCTGAGAAAGACCATAAGGAGGACTCGAA...TCTGTGTGGTGGTAAACACTGCAGTGCACAGGGCACTGTGCTAAGCAAGCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CCA 90 bp | AAGTGCTTGCTTAGCACAGTGCCCTGTGCACTGCAGTGTTTACCACCACACAGATTATCACTGAAGCTTTaGTCACAGTCAGGACACTTG | + |
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Preference number: 4 (lower is better) Translates to: KCLLSTVPCALQCLPPHRLSLKL*SQSGHL Trigger: CAAGTGTCCTGACTGTGACCAAAGCTTCAGTGATAA...TCTGTGTGGTGGTAAACACTGCAGTGCACAGGGCACTGTGCTAAGCAAGCACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CCA 90 bp | CTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACGTTGACAGTGTCAGGACCCTCAAAACTCTTCAATaGGGCTTCTCTGCTGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LRKEQVLPVKSNVDSVRTLKTLQ*GFSAEG Trigger: ACCCTCAGCAGAGAAGCCCCATTGAAGAGTTTTGAG...GGTCCTGACACTGTCAACGTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CCA 90 bp | GATCTGGAGGAAAACCCCCTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACCAACGGGTGCAGCAATaGAGTCCTTTTCTAGAGACA | + |
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Preference number: 4 (lower is better) Translates to: DLEENPLRKEQVLPVKSNQRVQQ*SPFLET Trigger: TGTCTCTAGAAAAGGACTCCATTGCTGCACCCGTTG...GTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAGGGGGTTTTCCTCCAGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CCA 90 bp | AAGTGCTTGCTTAGCACAGTGCCCTGTGCACTGCAGTGTTTACCACCACACAGATCTACTAATGGGGTTTaGTTGTCAATGGTAACCAAG | + |
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Preference number: 4 (lower is better) Translates to: KCLLSTVPCALQCLPPHRSTNGV*LSMVTK Trigger: CTTGGTTACCATTGACAACCAAACCCCATTAGTAGA...TCTGTGTGGTGGTAAACACTGCAGTGCACAGGGCACTGTGCTAAGCAAGCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CCA 90 bp | GATCTGGAGGAAAACCCCCTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACGGCTCTTCTCTTCTGTaGCTCTTCTCATGGGATACA | + |
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Preference number: 4 (lower is better) Translates to: DLEENPLRKEQVLPVKSNGSSLL*LFSWDT Trigger: TGTATCCCATGAGAAGAGCCACAGAAGAGAAGAGCC...GTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAGGGGGTTTTCCTCCAGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CCA 90 bp | AAGTGCTTGCTTAGCACAGTGCCCTGTGCACTGCAGTGTTTACCACCACACAGAACTTGTACACATTTTTaGCTTCTTCCCAAGGAACTT | + |
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Preference number: 4 (lower is better) Translates to: KCLLSTVPCALQCLPPHRTCTHF*LLPKEL Trigger: AAGTTCCTTGGGAAGAAGCCAAAAATGTGTACAAGT...TCTGTGTGGTGGTAAACACTGCAGTGCACAGGGCACTGTGCTAAGCAAGCACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR CAA 72 bp | TTCTATAGAAGAGACACTGCCCAGTTACTTACTACGTaGCAGCCACTGGCCTTCAAGAGGGCTTTTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: FYRRDTAQLLTT*QPLAFKRAFCS Trigger: TGAACAAAAAGCCCTCTTGAAGGCCAGTGGCTGCAACGTAGTAAGTAACTGGGCAGTGTCTCTTCTATAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR TCA 90 bp | CCCCTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACGTTGACAGTGTCAGGATGGGATACAAGCTCTaGCTCGAAAGCAAAAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: PLRKEQVLPVKSNVDSVRMGYKL*LESKSF Trigger: AAAACTTTTGCTTTCGAGTCAGAGCTTGTATCCCAT...CCTGACACTGTCAACGTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CCA 90 bp | AACCAGCCAAATCTGACCTTGACATACAGGGCATACAGTCTCAACTGTGGATCATTTCCAGGTCATGAATaGTTTGGTGAGAGACAAGCT | + |
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Preference number: 4 (lower is better) Translates to: NQPNLTLTYRAYSLNCGSFPGHE*FGERQA Trigger: AGCTTGTCTCTCACCAAACCATTCATGACCTGGAAA...TGATCCACAGTTGAGACTGTATGCCCTGTATGTCAAGGTCAGATTTGGCTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR TCA 90 bp | GATCTGGAGGAAAACCCCCTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACAGTCAACGTTCCACCTaGCATTTTGTCTTCAAGTAT | + |
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Preference number: 4 (lower is better) Translates to: DLEENPLRKEQVLPVKSNSQRST*HFVFKY Trigger: ATACTTGAAGACAAAATGTCAGGTGGAACGTTGACT...GTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAGGGGGTTTTCCTCCAGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR GCA 90 bp | GCCACTGGCCTTCAAGAGGGCTTTTTGTTCATGAAATTTCCCAGCAGTAATTCTCCTCATCATCAATACTaGAGTTTTTCGAGTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: ATGLQEGFLFMKFPSSNSPHHQY*SFSSPP Trigger: AGGAGGACTCGAAAAACTGCAGTATTGATGATGAGG...AGAATTACTGCTGGGAAATTTCATGAACAAAAAGCCCTCTTGAAGGCCAGTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CCA 90 bp | GCCACTGGCCTTCAAGAGGGCTTTTTGTTCATGAAATTTCCCAGCAGTAATTCTAGTTTCTCCTTTAAATaGCTATTCATGTGCCTAGAC | + |
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Preference number: 4 (lower is better) Translates to: ATGLQEGFLFMKFPSSNSSFSFK*LFMCLD Trigger: GTCTAGGCACATGAATAGCCATTTAAAGGAGAAACT...AGAATTACTGCTGGGAAATTTCATGAACAAAAAGCCCTCTTGAAGGCCAGTGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| 3UTR CAA 72 bp | ACAGTTTTATGCTTCCCTGGCTCATATAAATGGAATTaGATCAGTAACTGGGTTCAAATCCTGACTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: TVLCFPGSYKWN*ISNWVQILTSH Trigger: ATGTGAAGTCAGGATTTGAACCCAGTTACTGATCAAATTCCATTTATATGAGCCAGGGAAGCATAAAACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CAA 90 bp | GCCTGGTCTACAGAGCCAGGCCCAGGACAGCTAGAGCTCCACAGAAAAACCCTGACTAATGGGGTTTGGTaGTCAATGGTAACCAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: AWSTEPGPGQLELHRKTLTNGVW*SMVTKR Trigger: CCTCTTGGTTACCATTGACAACCAAACCCCATTAGT...CAGGGTTTTTCTGTGGAGCTCTAGCTGTCCTGGGCCTGGCTCTGTAGACCAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CAA 90 bp | GCCTGGTCTACAGAGCCAGGCCCAGGACAGCTAGAGCTCCACAGAAAAACCCTGAAGAGGCTTATAAGTTaGGTCTTGCAAGTCAACGTT | + |
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Preference number: 5 (lower is better) Translates to: AWSTEPGPGQLELHRKTLKRLIS*VLQVNV Trigger: AACGTTGACTTGCAAGACCAAACTTATAAGCCTCTT...CAGGGTTTTTCTGTGGAGCTCTAGCTGTCCTGGGCCTGGCTCTGTAGACCAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS CCA 90 bp | CATCCTGCTCAGATTGCTCAGAGTAGTGAACAACGGGTGCAGCAATaGAGTCCTTTTCTAGAGACAGCTCTTCAAGTTCCACAGGCTCGA | + |
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Preference number: 5 (lower is better) Translates to: HPAQIAQSSEQRVQQ*SPFLETALQVPQAR Trigger: TCGAGCCTGTGGAACTTGAAGAGCTGTCTCTAGAAAAGGACTCCATTGCTGCACCCGTTGTTCACTACTCTGAGCAATCTGAGCAGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CAA 90 bp | AAGTGCTTGCTTAGCACAGTGCCCTGTGCACTGCAGTGTTTACCACCACACAGAACTCACACATTCCTCTaGAGAAAAATACACATCCAG | + |
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Preference number: 5 (lower is better) Translates to: KCLLSTVPCALQCLPPHRTHTFL*RKIHIQ Trigger: CTGGATGTGTATTTTTCTCAAGAGGAATGTGTGAGT...TCTGTGTGGTGGTAAACACTGCAGTGCACAGGGCACTGTGCTAAGCAAGCACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS GCA 90 bp | CATACACTACATGTATATAGTTTCTCCTTTAAATGGCTATTCATGTaGCTAGACAGGTGTGACTGCTGTCGGAAGCTGGCAGCACACTCG | + |
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Preference number: 5 (lower is better) Translates to: HTLHVYSFSFKWLFM*LDRCDCCRKLAAHS Trigger: CGAGTGTGCTGCCAGCTTCCGACAGCAGTCACACCTGTCTAGGCACATGAATAGCCATTTAAAGGAGAAACTATATACATGTAGTGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CAA 90 bp | GATCTGGAGGAAAACCCCCTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACCACTTGTACACATTTTaGGCTTCTTCCCAAGGAACT | + |
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Preference number: 5 (lower is better) Translates to: DLEENPLRKEQVLPVKSNHLYTF*ASSQGT Trigger: AGTTCCTTGGGAAGAAGCCAAAAATGTGTACAAGTG...GTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAGGGGGTTTTCCTCCAGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS-3UTR CAA 90 bp | CTTAGAAAGGAACAGGTACTCCCTGTAAAGTCTAACGTTGACAGTGTCAGGACCTCACAGTCAGGACACTaGTACACATTTTTGGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LRKEQVLPVKSNVDSVRTSQSGH*YTFLAS Trigger: AGAAGCCAAAAATGTGTACAAGTGTCCTGACTGTGA...GGTCCTGACACTGTCAACGTTAGACTTTACAGGGAGTACCTGTTCCTTTCTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS TCA 90 bp | AACCAAGAGGCTTATAAGTTTGGTCTTGCAAGTCAACGTTCCACCTaGCATTTTGTCTTCAAGTATTTCATCATCCTGCTCAGATTGCTC | + |
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Preference number: 5 (lower is better) Translates to: NQEAYKFGLASQRST*HFVFKYFIILLRLL Trigger: GAGCAATCTGAGCAGGATGATGAAATACTTGAAGACAAAATGTCAGGTGGAACGTTGACTTGCAAGACCAAACTTATAAGCCTCTTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS CCA 72 bp | GAGGGCTGCTCCAAGGTCTTCACACAGTGTGTGTGCTaGGGCAGTGTGTCTGATGAACCTCTCTCTTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: EGCSKVFTQCVC*GSVSDEPLSSG Trigger: GCCTGAAGAGAGAGGTTCATCAGACACACTGCCCCAGCACACACACTGTGTGAAGACCTTGGAGCAGCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS GCA 72 bp | TTATGGTCTTTCTCAGGGAGAGTAGGGTCTGAGGGCTaGTCCAAGGTCTTCACACAGTGTGTGTGCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LWSFSGRVGSEG*SKVFTQCVCWG Trigger: GCCCCAGCACACACACTGTGTGAAGACCTTGGAGCAGCCCTCAGACCCTACTCTCCCTGAGAAAGACCATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS TCA 72 bp | GTCCTCCTTATGGTCTTTCTCAGGGAGAGTAGGGTCTaGGGGCTGCTCCAAGGTCTTCACACAGTGTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: VLLMVFLRESRV*GLLQGLHTVCV Trigger: CACACACACTGTGTGAAGACCTTGGAGCAGCCCTCAGACCCTACTCTCCCTGAGAAAGACCATAAGGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS GCA 72 bp | CTTCAAGTTCCACAGGCTCGAGGCTCAACTCCTGACTaGTTTCAGTCTGGTCTTCCCCTCCTATCGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LQVPQARGSTPD*FQSGLPLLSSP Trigger: TGGACTCGATAGGAGGGGAAGACCAGACTGAAAGCAGTCAGGAGTTGAGCCTCGAGCCTGTGGAACTTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS GCA 72 bp | TCTGAGGGCTGCTCCAAGGTCTTCACACAGTGTGTGTaGTGGGGCAGTGTGTCTGATGAACCTCTCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SEGCSKVFTQCV*WGSVSDEPLSS Trigger: TGAAGAGAGAGGTTCATCAGACACACTGCCCCAGCACACACACTGTGTGAAGACCTTGGAGCAGCCCTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS GCA 72 bp | TTTAAATGGCTATTCATGTGCCTAGACAGGTGTGACTaGTGTCGGAAGCTGGCAGCACACTCGGTACACTTG | + |
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Preference number: 6 (lower is better) Translates to: FKWLFMCLDRCD*CRKLAAHSVHL Trigger: CAAGTGTACCGAGTGTGCTGCCAGCTTCCGACAGCAGTCACACCTGTCTAGGCACATGAATAGCCATTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS CCA 72 bp | TCATCATCAATACTGCAGTTTTTCGAGTCCTCCTTATaGTCTTTCTCAGGGAGAGTAGGGTCTGAGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSSILQFFESSL*SFSGRVGSEGC Trigger: GCAGCCCTCAGACCCTACTCTCCCTGAGAAAGACCATAAGGAGGACTCGAAAAACTGCAGTATTGATGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS CAA 90 bp | GGGGCAGTGTGTCTGATGAACCTCTCTCTTCAGGCAAAGCCAGATTaGCTTCCCGATTGTGGTCAGCACATTCATAAGATTTCTTATCAG | + |
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Preference number: 6 (lower is better) Translates to: GAVCLMNLSLQAKPD*LPDCGQHIHKISYQ Trigger: CTGATAAGAAATCTTATGAATGTGCTGACCACAATCGGGAAGCAAATCTGGCTTTGCCTGAAGAGAGAGGTTCATCAGACACACTGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS CCA 72 bp | CAGATTGCTCAGAGTAGTGAACAACGGGTGCAGCAATaGAGTCCTTTTCTAGAGACAGCTCTTCAAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: QIAQSSEQRVQQ*SPFLETALQVP Trigger: TGGAACTTGAAGAGCTGTCTCTAGAAAAGGACTCCATTGCTGCACCCGTTGTTCACTACTCTGAGCAATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS GCA 72 bp | CATGTATATAGTTTCTCCTTTAAATGGCTATTCATGTaGCTAGACAGGTGTGACTGCTGTCGGAAGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: HVYSFSFKWLFM*LDRCDCCRKLA Trigger: TGCCAGCTTCCGACAGCAGTCACACCTGTCTAGGCACATGAATAGCCATTTAAAGGAGAAACTATATACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS CAA 72 bp | TGTCTGATGAACCTCTCTCTTCAGGCAAAGCCAGATTaGCTTCCCGATTGTGGTCAGCACATTCATAAGATT | + |
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Preference number: 6 (lower is better) Translates to: CLMNLSLQAKPD*LPDCGQHIHKI Trigger: AATCTTATGAATGTGCTGACCACAATCGGGAAGCAAATCTGGCTTTGCCTGAAGAGAGAGGTTCATCAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS TCA 72 bp | GGATTCGCTTATGTGTCCTCAGGTTGGTTCGGTGACTaGAGGTCTTCTCACAGGTACTACATTTATACTTTT | + |
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Preference number: 6 (lower is better) Translates to: GFAYVSSGWFGD*RSSHRYYIYTF Trigger: AAAAGTATAAATGTAGTACCTGTGAGAAGACCTTCAGTCACCGAACCAACCTGAGGACACATAAGCGAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS CAA 72 bp | CATTTTGTCTTCAAGTATTTCATCATCCTGCTCAGATaGCTCAGAGTAGTGAACAACGGGTGCAGCAATGGA | + |
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Preference number: 6 (lower is better) Translates to: HFVFKYFIILLR*LRVVNNGCSNG Trigger: TCCATTGCTGCACCCGTTGTTCACTACTCTGAGCAATCTGAGCAGGATGATGAAATACTTGAAGACAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS CCA 72 bp | ATGTTTTGCACTTATGAGGTTTTTCCAGGTCATGAATaGTTTGGTGAGAGACAAGCTCCGAGAAACAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: MFCTYEVFPGHE*FGERQAPRNKE Trigger: TTCCTTGTTTCTCGGAGCTTGTCTCTCACCAAACCATTCATGACCTGGAAAAACCTCATAAGTGCAAAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS CAA 72 bp | AGTTTGGTCTTGCAAGTCAACGTTCCACCTGACATTTaGTCTTCAAGTATTTCATCATCCTGCTCAGATTGC | + |
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Preference number: 6 (lower is better) Translates to: SLVLQVNVPPDI*SSSISSSCSDC Trigger: GCAATCTGAGCAGGATGATGAAATACTTGAAGACAAAATGTCAGGTGGAACGTTGACTTGCAAGACCAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS CAA 72 bp | GTTTGGTTGTCAATGGTAACCAAGAGGCTTATAAGTTaGGTCTTGCAAGTCAACGTTCCACCTGACATTTTG | + |
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Preference number: 6 (lower is better) Translates to: VWLSMVTKRLIS*VLQVNVPPDIL Trigger: CAAAATGTCAGGTGGAACGTTGACTTGCAAGACCAAACTTATAAGCCTCTTGGTTACCATTGACAACCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS CAA 72 bp | GTATTATCACTGAAGCTTTGGTCACAGTCAGGACACTaGTACACATTTTTGGCTTCTTCCCAAGGAACTTCA | + |
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Preference number: 6 (lower is better) Translates to: VLSLKLWSQSGH*YTFLASSQGTS Trigger: TGAAGTTCCTTGGGAAGAAGCCAAAAATGTGTACAAGTGTCCTGACTGTGACCAAAGCTTCAGTGATAATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS CAA 72 bp | TTTGCACTTATGAGGTTTTTCCAGGTCATGAATGGTTaGGTGAGAGACAAGCTCCGAGAAACAAGGAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: FALMRFFQVMNG*VRDKLRETRKS Trigger: ACTTTTCCTTGTTTCTCGGAGCTTGTCTCTCACCAAACCATTCATGACCTGGAAAAACCTCATAAGTGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS CAA 90 bp | GGGGTTTGGTTGTCAATGGTAACCAAGAGGCTTATAAGTTTGGTCTaGCAAGTCAACGTTCCACCTGACATTTTGTCTTCAAGTATTTCA | + |
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Preference number: 6 (lower is better) Translates to: GVWLSMVTKRLISLV*QVNVPPDILSSSIS Trigger: TGAAATACTTGAAGACAAAATGTCAGGTGGAACGTTGACTTGCAAGACCAAACTTATAAGCCTCTTGGTTACCATTGACAACCAAACCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS CAA 90 bp | ACTAATGGGGTTTGGTTGTCAATGGTAACCAAGAGGCTTATAAGTTaGGTCTTGCAAGTCAACGTTCCACCTGACATTTTGTCTTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: TNGVWLSMVTKRLIS*VLQVNVPPDILSSS Trigger: ACTTGAAGACAAAATGTCAGGTGGAACGTTGACTTGCAAGACCAAACTTATAAGCCTCTTGGTTACCATTGACAACCAAACCCCATTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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| CDS CAA 72 bp | CTGATGCAAAACAAGGTATGTATTATCACTGAAGCTTaGGTCACAGTCAGGACACTTGTACACATTTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: LMQNKVCIITEA*VTVRTLVHIFG Trigger: GCCAAAAATGTGTACAAGTGTCCTGACTGTGACCAAAGCTTCAGTGATAATACATACCTTGTTTTGCATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090522.5 |
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