Pregenerated sensors for ZFP595 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057842Ensembl transcript IDs: ENSMUST00000109735.9, ENSMUST00000168892.9, ENSMUST00000169142.8, ENSMUST00000171466.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAGACAGGAAACTGCCCTTACCTCAAATGCTGACCTGCAAGCTGTaGAGAAGCAGAAAACATAGAAAGTCAACAGCCAAACTCTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: LDRKLPLPQMLTCKL*RSRKHRKSTAKLCQ Trigger: CTGGCAGAGTTTGGCTGTTGACTTTCTATGTTTTCTGCTTCTCCACAGCTTGCAGGTCAGCATTTGAGGTAAGGGCAGTTTCCTGTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| 3UTR CCA 90 bp | AATTGGAGCGTGTTTACAGTTTCAGAGGCTTGTAAGTTATTATTGTaGGAAACTAGCTTGGGAGCATGGTGGAATGCAGATAGACATGGT | + |
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Preference number: 1 (lower is better) Translates to: NWSVFTVSEACKLLL*ETSLGAWWNADRHG Trigger: ACCATGTCTATCTGCATTCCACCATGCTCCCAAGCTAGTTTCCCACAATAATAACTTACAAGCCTCTGAAACTGTAAACACGCTCCAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 |
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| 3UTR CCA 90 bp | CAACTATTAGTTGCTGGCATCTTTATTTACCAATCAAAAATAACATaGAGCAGGGTCCAAGGGACTAAATGCAGACTCCAGATCTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: QLLVAGIFIYQSKIT*SRVQGTKCRLQILG Trigger: TCCCAAGATCTGGAGTCTGCATTTAGTCCCTTGGACCCTGCTCCATGTTATTTTTGATTGGTAAATAAAGATGCCAGCAACTAATAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| 3UTR CCA 90 bp | GAACTTCATTCTATTTTGAGGGTACTTGGAATACTAACATGGGTGTaGGTCTTGTTGGCAACTCAGTTTGTTCCCAAAGTTAACATGCTA | + |
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Preference number: 1 (lower is better) Translates to: ELHSILRVLGILTWV*VLLATQFVPKVNML Trigger: TAGCATGTTAACTTTGGGAACAAACTGAGTTGCCAACAAGACCCACACCCATGTTAGTATTCCAAGTACCCTCAAAATAGAATGAAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR CCA 90 bp | GAGATAGAACTTCATTCTATTTTGAGGGTACTTGGAATACTAACATaGGTGTGGGTCTTGTTGGCAACTCAGTTTGTTCCCAAAGTTAAC | + |
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Preference number: 1 (lower is better) Translates to: EIELHSILRVLGILT*VWVLLATQFVPKVN Trigger: GTTAACTTTGGGAACAAACTGAGTTGCCAACAAGACCCACACCCATGTTAGTATTCCAAGTACCCTCAAAATAGAATGAAGTTCTATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR GCA 90 bp | AGGAAACCTAATCGGCACTTACGTATCTTCTACCCAACTATTAGTTaGTGGCATCTTTATTTACCAATCAAAAATAACATGGAGCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: RKPNRHLRIFYPTIS*WHLYLPIKNNMEQG Trigger: ACCCTGCTCCATGTTATTTTTGATTGGTAAATAAAGATGCCAGCAACTAATAGTTGGGTAGAAGATACGTAAGTGCCGATTAGGTTTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| 3UTR-3UTR GCA 90 bp | TGGAGCAGGGTCCAAGGGACTAAATGCAGACTCCAGATCTTGGGAGTCCTGCACCCTCAAATGCTGACCTaGAAGCTGTGGAGAAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: WSRVQGTKCRLQILGVLHPQMLT*KLWRSR Trigger: TCTGCTTCTCCACAGCTTGCAGGTCAGCATTTGAGG...GTGCAGGACTCCCAAGATCTGGAGTCTGCATTTAGTCCCTTGGACCCTGCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCAGGGTCCAAGGGACTAAATGCAGACTCCAGATCTTGGGAGTCCTGCACTCTGGGCCAATAGGTTaGAGAGATAAATGCTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: WSRVQGTKCRLQILGVLHSGPIG*RDKCSS Trigger: ACTGGAGCATTTATCTCTTCAACCTATTGGCCCAGA...GTGCAGGACTCCCAAGATCTGGAGTCTGCATTTAGTCCCTTGGACCCTGCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| 3UTR-3UTR TCA 90 bp | CACACTTACACTAATGACGCCGCACTCCTTAATCTTTTTCCAGCAGTGCTACTAGACAACCACACAGCCTaGCAGCTCCACTTTTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: HTYTNDAALLNLFPAVLLDNHTA*QLHFWH Trigger: ATGCCAAAAGTGGAGCTGTCAGGCTGTGTGGTTGTC...TAGTAGCACTGCTGGAAAAAGATTAAGGAGTGCGGCGTCATTAGTGTAAGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAACTGCCCTTACCTCAAATGCTGACCTGCAAGCTGTGGAGAAGCAGAAAACAGATGCTTCCAACTaGAATCAACAGACCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: QETALTSNADLQAVEKQKTDASN*NQQTSC Trigger: ACAGGAGGTCTGTTGATTGCAGTTGGAAGCATCTGT...TTTCTGCTTCTCCACAGCTTGCAGGTCAGCATTTGAGGTAAGGGCAGTTTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| 3UTR-3UTR CCA 90 bp | AGACAGCAAGGAAGGATCAAACCCAAATCCAGAAGGACAACCACACAGCCTGACTCAGGAAGCAGAAGATaGATGAATAGCTGGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: RQQGRIKPKSRRTTTQPDSGSRR*MNSWSQ Trigger: CTGAGACCAGCTATTCATCCATCTTCTGCTTCCTGA...GTCAGGCTGTGTGGTTGTCCTTCTGGATTTGGGTTTGATCCTTCCTTGCTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR-3UTR TCA 90 bp | AGGAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGAGAAGCAGAAGATGGATaGATAGCTGGTCTCAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: RNISSWSRFFYSQEAEDGEAEDG*IAGLRV Trigger: TACCCTGAGACCAGCTATTCATCCATCTTCTGCTTC...TCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATGTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGGAAGGATCAAACCCAAATCCAGAAGGACAACCACACAGCCTGACAGCTCCTCTCAGTCAAACAGATaGTTCCAACTGCAATCAACA | + |
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Preference number: 2 (lower is better) Translates to: QGRIKPKSRRTTTQPDSSSQSNR*FQLQST Trigger: TGTTGATTGCAGTTGGAAGCATCTGTTTGACTGAGA...GGAGCTGTCAGGCTGTGTGGTTGTCCTTCTGGATTTGGGTTTGATCCTTCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR-3UTR GCA 90 bp | CATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATCCTCAAATGCTGACCTaGAAGACTAATGACGCCGCA | + |
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Preference number: 2 (lower is better) Translates to: HKQLVTFLLQSGSRRWMNPQMLT*KTNDAA Trigger: TGCGGCGTCATTAGTCTTGCAGGTCAGCATTTGAGG...ATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169142.8 |
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| 3UTR-3UTR GCA 90 bp | ACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATAGCTGGTCTCAGGGTACAGATGCTTCCAACTaGAATCAACAGACCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: TFLLQSGSRRWMNSWSQGTDASN*NQQTSC Trigger: ACAGGAGGTCTGTTGATTGCAGTTGGAAGCATCTGT...ACCCTGAGACCAGCTATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109735.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| 3UTR-3UTR GCA 90 bp | CAACAGGAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGAACAGATGCTTCCAACTaGAATCAACAGACCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: QQEHKQLVTFLLQSGSRRTDASN*NQQTSC Trigger: ACAGGAGGTCTGTTGATTGCAGTTGGAAGCATCTGT...TCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATGTTCCTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109735.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATCAGGAAGCAGAAGATaGATGAATAGCTGGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: RNISSWSRFFYSQEAEDGSGSRR*MNSWSQ Trigger: CTGAGACCAGCTATTCATCCATCTTCTGCTTCCTGA...TCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATGTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| 3UTR-3UTR CCA 90 bp | AGACTAATGACGCCGCACTCCTTAATCTTTTTCCAGCAGTGCTACTACCTTCAGAAGCCTATGAGCCCTTaGGGCAATTCTTATTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: RLMTPHSLIFFQQCYYLQKPMSP*GNSYSN Trigger: GTTGGAATAAGAATTGCCCCAAGGGCTCATAGGCTT...CTGAAGGTAGTAGCACTGCTGGAAAAAGATTAAGGAGTGCGGCGTCATTAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169142.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAGAAAGGTAAAACAACAGGAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCTCAGGGTATTCTCTaGTACTGCAGCATCTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: VRKVKQQEHKQLVTFLLQSQGIL*YCSISV Trigger: GACTGAGATGCTGCAGTATCAGAGAATACCCTGAGA...CTGTAGAAGAAACGTGACCAGCTGCTTATGTTCCTGTTGTTTTACCTTTCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| 3UTR-3UTR CCA 90 bp | CACACTTACACTAATGACGCCGCACTCCTTAATCTTTTTCCAGCAGTGCTACTAAAGCCTATGAGCCCTTaGGGCAATTCTTATTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: HTYTNDAALLNLFPAVLLKPMSP*GNSYSN Trigger: GTTGGAATAAGAATTGCCCCAAGGGCTCATAGGCTT...TAGTAGCACTGCTGGAAAAAGATTAAGGAGTGCGGCGTCATTAGTGTAAGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 |
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| 3UTR-3UTR GCA 90 bp | GAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGTCTCAGTCAAACAGATaGTTCCAACTGCAATCAACA | + |
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Preference number: 2 (lower is better) Translates to: EHKQLVTFLLQSGSRRWMSQSNR*FQLQST Trigger: TGTTGATTGCAGTTGGAAGCATCTGTTTGACTGAGA...CATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAGAAAGGTAAAACAACAGGAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATaGATGAATAGCTGGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: VRKVKQQEHKQLVTFLLQSGSRR*MNSWSQ Trigger: CTGAGACCAGCTATTCATCCATCTTCTGCTTCCTGA...CTGTAGAAGAAACGTGACCAGCTGCTTATGTTCCTGTTGTTTTACCTTTCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| 3UTR-3UTR CCA 90 bp | CATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATATCTGTCAGATGTTCTaGGCCAATAGGTTGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: HKQLVTFLLQSGSRRWMNICQMF*ANRLKR Trigger: TCTCTTCAACCTATTGGCCCAGAACATCTGACAGAT...ATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| 3UTR-3UTR CCA 90 bp | TATTTATGTTGGCATGTGGTCTTACATACAGAGGTCAGAGGGCAAACTTCAGAGATACTAACATGGGTGTaGGTCTTGTTGGCAACTCAG | + |
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Preference number: 2 (lower is better) Translates to: YLCWHVVLHTEVRGQTSEILTWV*VLLATQ Trigger: CTGAGTTGCCAACAAGACCCACACCCATGTTAGTAT...CTCTGAAGTTTGCCCTCTGACCTCTGTATGTAAGACCACATGCCAACATAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR-3UTR CCA 90 bp | TTGTTGGCAACTCAGTTTGTTCCCAAAGTTAACATGCTAGCTCTATCCAAAAAGAGCTTGGGAGCATGGTaGAATGCAGATAGACATGGT | + |
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Preference number: 2 (lower is better) Translates to: LLATQFVPKVNMLALSKKSLGAW*NADRHG Trigger: ACCATGTCTATCTGCATTCCACCATGCTCCCAAGCT...CTTTTTGGATAGAGCTAGCATGTTAACTTTGGGAACAAACTGAGTTGCCAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGAAACCTAATCGGCACTTACGTATCTTCTACCCAACTATTAGTTGCTGGTGTAAGTTATTATTGTaGGAAACTAGCTTGGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: PRKPNRHLRIFYPTISCWCKLLL*ETSLGA Trigger: TGCTCCCAAGCTAGTTTCCCACAATAATAACTTACA...CCAGCAACTAATAGTTGGGTAGAAGATACGTAAGTGCCGATTAGGTTTCCTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| 3UTR CAA 90 bp | CATTCTATTTTGAGGGTACTTGGAATACTAACATGGGTGTGGGTCTaGTTGGCAACTCAGTTTGTTCCCAAAGTTAACATGCTAGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: HSILRVLGILTWVWV*LATQFVPKVNMLAL Trigger: TAGAGCTAGCATGTTAACTTTGGGAACAAACTGAGTTGCCAACAAGACCCACACCCATGTTAGTATTCCAAGTACCCTCAAAATAGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR-3UTR TCA 90 bp | AGCTCTATCCAAAAAGCTTTAAATCATAACATCCCTTCCCTTTCCCCAAACTTATCTCAGGGTATTCTCTaGTACTGCAGCATCTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: SSIQKALNHNIPSLSPNLSQGIL*YCSISV Trigger: GACTGAGATGCTGCAGTATCAGAGAATACCCTGAGA...TAAGTTTGGGGAAAGGGAAGGGATGTTATGATTTAAAGCTTTTTGGATAGAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR-3UTR TCA 90 bp | CATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATGATAGACATGGTACTTaGAGAGTAGCTGAGAATTAT | + |
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Preference number: 2 (lower is better) Translates to: HKQLVTFLLQSGSRRWMNDRHGT*RVAENY Trigger: ATAATTCTCAGCTACTCTTCAAGTACCATGTCTATC...ATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGAGAAAGGTAAAACAACAGGAACATAAGCAGCTGGTCACGTTTCTTCTATCTAAAGGACTTGACTaGTACATCCCAAGTATAGGG | + |
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Preference number: 2 (lower is better) Translates to: MVRKVKQQEHKQLVTFLLSKGLD*YIPSIG Trigger: CCCTATACTTGGGATGTATCAGTCAAGTCCTTTAGA...TAGAAGAAACGTGACCAGCTGCTTATGTTCCTGTTGTTTTACCTTTCTCACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR-3UTR TCA 90 bp | CATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATTTTGGCATGATTGTGTaGATGATTGCAAAGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: HKQLVTFLLQSGSRRWMNFGMIV*MIAKPL Trigger: TAAAGGCTTTGCAATCATTCACACAATCATGCCAAA...ATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR-3UTR GCA 90 bp | ATGGTGAGAAAGGTAAAACAACAGGAACATAAGCAGCTGGTCACGTTTCTTCTATACTCAGTGTCCGGTTaGTATGAAGAGACATCAAAC | + |
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Preference number: 2 (lower is better) Translates to: MVRKVKQQEHKQLVTFLLYSVSG*YEETSN Trigger: GTTTGATGTCTCTTCATAGCAACCGGACACTGAGTA...TAGAAGAAACGTGACCAGCTGCTTATGTTCCTGTTGTTTTACCTTTCTCACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 |
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| 3UTR-3UTR CCA 90 bp | CATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATATTTATGTTGGCATGTaGTCTTACATACAGAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: HKQLVTFLLQSGSRRWMNIYVGM*SYIQRS Trigger: TGACCTCTGTATGTAAGACCACATGCCAACATAAAT...ATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR CAA 90 bp | TTTAATTGGAGCGTGTTTACAGTTTCAGAGGCTTGTAAGTTATTATaGTGGGAAACTAGCTTGGGAGCATGGTGGAATGCAGATAGACAT | + |
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Preference number: 2 (lower is better) Translates to: FNWSVFTVSEACKLL*WETSLGAWWNADRH Trigger: ATGTCTATCTGCATTCCACCATGCTCCCAAGCTAGTTTCCCACAATAATAACTTACAAGCCTCTGAAACTGTAAACACGCTCCAATTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 |
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| 3UTR-3UTR TCA 90 bp | TTGTTGGCAACTCAGTTTGTTCCCAAAGTTAACATGCTAGCTCTATCCAAAAAGAGTCCATGTATCATGTaGGACTCAAGGCAATCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LLATQFVPKVNMLALSKKSPCIM*DSRQSL Trigger: AAGAGATTGCCTTGAGTCTCACATGATACATGGACT...CTTTTTGGATAGAGCTAGCATGTTAACTTTGGGAACAAACTGAGTTGCCAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR-3UTR TCA 90 bp | ACTTACGTATCTTCTACCCAACTATTAGTTGCTGGCATCTTTATTTACCAATCAGGGAGATACTGGGTCTaGAACTTTGAAACCTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: TYVSSTQLLVAGIFIYQSGRYWV*NFETSN Trigger: ATTTGAGGTTTCAAAGTTTCAGACCCAGTATCTCCC...TGATTGGTAAATAAAGATGCCAGCAACTAATAGTTGGGTAGAAGATACGTAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| 3UTR-3UTR GCA 90 bp | ATGGTGAGAAAGGTAAAACAACAGGAACATAAGCAGCTGGTCACGTTTCTTCTAGATTGTGTGAATGATTaGAAAGCCTTTACCATATTC | + |
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Preference number: 2 (lower is better) Translates to: MVRKVKQQEHKQLVTFLLDCVND*KAFTIF Trigger: GAATATGGTAAAGGCTTTGCAATCATTCACACAATC...TAGAAGAAACGTGACCAGCTGCTTATGTTCCTGTTGTTTTACCTTTCTCACCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR-3UTR CCA 90 bp | TTGTTGGCAACTCAGTTTGTTCCCAAAGTTAACATGCTAGCTCTATCCAAAAAGTGTAAGTTATTATTGTaGGAAACTAGCTTGGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: LLATQFVPKVNMLALSKKCKLLL*ETSLGA Trigger: TGCTCCCAAGCTAGTTTCCCACAATAATAACTTACA...CTTTTTGGATAGAGCTAGCATGTTAACTTTGGGAACAAACTGAGTTGCCAACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR TCA 72 bp | AGAGATAAATGCTCCAGTGTTGCAGGGGCACCCGTGTaGCTGGCAGGCAGCCAGCAGTCACTAATATTTCTC | + |
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Preference number: 3 (lower is better) Translates to: RDKCSSVAGAPV*LAGSQQSLIFL Trigger: GAGAAATATTAGTGACTGCTGGCTGCCTGCCAGTCACACGGGTGCCCCTGCAACACTGGAGCATTTATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| 3UTR TCA 72 bp | CAGTGCTACTACCTTCAGACTAAGCATTCAAGCCTATaGGCCCTTGGGGCAATTCTTATTCCAACCACAGCA | + |
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Preference number: 3 (lower is better) Translates to: QCYYLQTKHSSL*ALGAILIPTTA Trigger: TGCTGTGGTTGGAATAAGAATTGCCCCAAGGGCTCATAGGCTTGAATGCTTAGTCTGAAGGTAGTAGCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 |
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| 3UTR TCA 72 bp | GATCAAACCCAAATCCAGAAGGACAACCACACAGCCTaGCAGCTCCACTTTTGGCATGATTGTGTGAATGAT | + |
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Preference number: 3 (lower is better) Translates to: DQTQIQKDNHTA*QLHFWHDCVND Trigger: ATCATTCACACAATCATGCCAAAAGTGGAGCTGTCAGGCTGTGTGGTTGTCCTTCTGGATTTGGGTTTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| 3UTR GCA 72 bp | CTAGACAGGAAACTGCCCTTACCTCAAATGCTGACCTaGAAGCTGTGGAGAAGCAGAAAACATAGAAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LDRKLPLPQMLT*KLWRSRKHRKS Trigger: TGACTTTCTATGTTTTCTGCTTCTCCACAGCTTGCAGGTCAGCATTTGAGGTAAGGGCAGTTTCCTGTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| 3UTR GCA 72 bp | CTAGACAGGAAACTGCCCTTACCTCAAATGCTGACCTaGAAGACTAATGACGCCGCACTCCTTAATCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: LDRKLPLPQMLT*KTNDAALLNLF Trigger: AAAAAGATTAAGGAGTGCGGCGTCATTAGTCTTGCAGGTCAGCATTTGAGGTAAGGGCAGTTTCCTGTCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169142.8 |
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| 3UTR TCA 72 bp | AGAAGATGGATGAATAGCTGGTCTCAGGGTATTCTCTaGTACTGCAGCATCTCAGTCAAACAGATGCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: RRWMNSWSQGIL*YCSISVKQMLP Trigger: TGGAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCTGAGACCAGCTATTCATCCATCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| 3UTR CCA 72 bp | AAACTGCCCTTACCTCAAATGCTGACCTGCAAGCTGTaGAGAAGCAGAAAACATAGAAAGTCAACAGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: KLPLPQMLTCKL*RSRKHRKSTAK Trigger: TTTGGCTGTTGACTTTCTATGTTTTCTGCTTCTCCACAGCTTGCAGGTCAGCATTTGAGGTAAGGGCAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
||
| 3UTR TCA 72 bp | ACACAGCCTGACAGCTCCACTTTTGGCATGATTGTGTaGATGATTGCAAAGCCTTTACCATATTCCTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TQPDSSTFGMIV*MIAKPLPYSSN Trigger: GTTTGAGGAATATGGTAAAGGCTTTGCAATCATTCACACAATCATGCCAAAAGTGGAGCTGTCAGGCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
||
| 3UTR CCA 72 bp | GTTGCTGGCATCTTTATTTACCAATCAAAAATAACATaGAGCAGGGTCCAAGGGACTAAATGCAGACTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VAGIFIYQSKIT*SRVQGTKCRLQ Trigger: CTGGAGTCTGCATTTAGTCCCTTGGACCCTGCTCCATGTTATTTTTGATTGGTAAATAAAGATGCCAGCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
||
| 3UTR-3UTR CAA 90 bp | CATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATCATAGTTCAATTCCATaGTCTACCATGGAGACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: HKQLVTFLLQSGSRRWMNHSSIP*STMETY Trigger: GTAAGTCTCCATGGTAGACAATGGAATTGAACTATG...ATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTCTTGTTGGCAACTCAGTTTGTTCCCAAAGTTAACATGCTAGCTCTATCCCATAGTTCAATTCCATaGTCTACCATGGAGACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: WVLLATQFVPKVNMLALSHSSIP*STMETY Trigger: GTAAGTCTCCATGGTAGACAATGGAATTGAACTATG...GGATAGAGCTAGCATGTTAACTTTGGGAACAAACTGAGTTGCCAACAAGACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
||
| 3UTR-3UTR CAA 90 bp | AAACTGCCCTTACCTCAAATGCTGACCTGCAAGCTGTGGAGAAGCAGAAAACATATAACTCCTTCATATTaGCTGCTGCAGAGAAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: KLPLPQMLTCKLWRSRKHITPSY*LLQRKI Trigger: GATTTTTCTCTGCAGCAGCAAATATGAAGGAGTTAT...ATGTTTTCTGCTTCTCCACAGCTTGCAGGTCAGCATTTGAGGTAAGGGCAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
||
| 3UTR CCA 72 bp | TCTATTTTGAGGGTACTTGGAATACTAACATGGGTGTaGGTCTTGTTGGCAACTCAGTTTGTTCCCAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SILRVLGILTWV*VLLATQFVPKV Trigger: AACTTTGGGAACAAACTGAGTTGCCAACAAGACCCACACCCATGTTAGTATTCCAAGTACCCTCAAAATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
||
| 3UTR-3UTR CAA 90 bp | TATTTATGTTGGCATGTGGTCTTACATACAGAGGTCAGAGGGCAAACTTCAGAGGTAGAAGGGCTTAATTaGGATCATAGTTCAATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: YLCWHVVLHTEVRGQTSEVEGLN*DHSSIP Trigger: TGGAATTGAACTATGATCCAAATTAAGCCCTTCTAC...CTCTGAAGTTTGCCCTCTGACCTCTGTATGTAAGACCACATGCCAACATAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
||
| 3UTR CCA 72 bp | TTCAGAGATAGAACTTCATTCTATTTTGAGGGTACTTaGAATACTAACATGGGTGTGGGTCTTGTTGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: FRDRTSFYFEGT*NTNMGVGLVGN Trigger: GTTGCCAACAAGACCCACACCCATGTTAGTATTCCAAGTACCCTCAAAATAGAATGAAGTTCTATCTCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
||
| 3UTR CCA 72 bp | CGGCACTTACGTATCTTCTACCCAACTATTAGTTGCTaGCATCTTTATTTACCAATCAAAAATAACATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RHLRIFYPTISC*HLYLPIKNNME Trigger: CTCCATGTTATTTTTGATTGGTAAATAAAGATGCCAGCAACTAATAGTTGGGTAGAAGATACGTAAGTGCCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGCAGGGTCCAAGGGACTAAATGCAGACTCCAGATCTTGGGAGTCCTGCACGATATTCGAAGGCCTTaGCACATACTTCACACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WSRVQGTKCRLQILGVLHDIRRP*HILHTC Trigger: GCAAGTGTGAAGTATGTGGCAAGGCCTTCGAATATC...GTGCAGGACTCCCAAGATCTGGAGTCTGCATTTAGTCCCTTGGACCCTGCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
||
| CDS-3UTR TCA 90 bp | CACACTTACACTAATGACGCCGCACTCCTTAATCTTTTTCCAGCAGTGCTACTACTGTACATTTTCCACTaGGCAGGACCCAGGTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTYTNDAALLNLFPAVLLLYIFH*AGPRYS Trigger: GGAATACCTGGGTCCTGCTCAGTGGAAAATGTACAG...TAGTAGCACTGCTGGAAAAAGATTAAGGAGTGCGGCGTCATTAGTGTAAGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTCCTGGTTCTCCTCTGACCCCAAGCCCAGGAAACCTAATCGGCACTTAGAAAGCTCTTGTCTTTaGTCCAGAAATGTGACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FFSWFSSDPKPRKPNRHLESSCL*SRNVTR Trigger: TCTAGTCACATTTCTGGAGCAAAGACAAGAGCTTTC...TAAGTGCCGATTAGGTTTCCTGGGCTTGGGGTCAGAGGAGAACCAGGAGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
||
| CDS-3UTR TCA 90 bp | TTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATAGCTGGTCTCAGGGTATTCTGTACATTTTCCACTaGGCAGGACCCAGGTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLQSGSRRWMNSWSQGILYIFH*AGPRYS Trigger: GGAATACCTGGGTCCTGCTCAGTGGAAAATGTACAG...AATACCCTGAGACCAGCTATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR GCA 90 bp | AGGAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGAGATATTCGAAGGCCTTaGCACATACTTCACACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RNISSWSRFFYSQEAEDGDIRRP*HILHTC Trigger: GCAAGTGTGAAGTATGTGGCAAGGCCTTCGAATATC...TCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATGTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTCAGGGTATTCTCTGATACTGCAGCATCTCAGTCAAACAGATGCTTCCAAGATATTCGAAGGCCTTaGCACATACTTCACACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLRVFSDTAASQSNRCFQDIRRP*HILHTC Trigger: GCAAGTGTGAAGTATGTGGCAAGGCCTTCGAATATC...TTGGAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCTGAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCAGGGTATTCTCTGATACTGCAGCATCTCAGTCAAACAGATGCTTCCAACCATAATGGAAGGCCTTaGCACATATGTCACACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSGYSLILQHLSQTDASNHNGRP*HICHTG Trigger: ACCAGTGTGACATATGTGGCAAGGCCTTCCATTATG...GTTGGAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCTGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTCAGGGTATTCTCTGATACTGCAGCATCTCAGTCAAACAGATGCTTCCAACATAATGGAAGGCCTTaGCACATATGTCACACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLRVFSDTAASQSNRCFQHNGRP*HICHTG Trigger: ACCAGTGTGACATATGTGGCAAGGCCTTCCATTATG...TTGGAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCTGAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR TCA 90 bp | ATGGTGAGAAAGGTAAAACAACAGGAACATAAGCAGCTGGTCACGTTTCTTCTACTGTACATTTTCCACTaGGCAGGACCCAGGTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: MVRKVKQQEHKQLVTFLLLYIFH*AGPRYS Trigger: GGAATACCTGGGTCCTGCTCAGTGGAAAATGTACAG...TAGAAGAAACGTGACCAGCTGCTTATGTTCCTGTTGTTTTACCTTTCTCACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR TCA 90 bp | AGACAGCAAGGAAGGATCAAACCCAAATCCAGAAGGACAACCACACAGCCTGACGTGTTGAAAAAGTTTTaGTGGAACATGAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQQGRIKPKSRRTTTQPDVLKKF*WNMKGL Trigger: AAGGCCTTTCATGTTCCATCAAAACTTTTTCAACAC...GTCAGGCTGTGTGGTTGTCCTTCTGGATTTGGGTTTGATCCTTCCTTGCTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
||
| CDS-3UTR TCA 90 bp | CAACAGGAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGAATGGTTGGAAAGTCTTaGTGGGTAATGAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QQEHKQLVTFLLQSGSRRMVGKS*WVMKGL Trigger: AAGGCCTTTCATTACCCATCAAGACTTTCCAACCAT...TCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATGTTCCTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTATTCTCTGATACTGCAGCATCTCAGTCAAACAGATGCTTCCAACTGCAAGATATTCGAAGGCCTTaGCACATACTTCACACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVFSDTAASQSNRCFQLQDIRRP*HILHTC Trigger: GCAAGTGTGAAGTATGTGGCAAGGCCTTCGAATATC...TTGCAGTTGGAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR GCA 90 bp | CACACTTACACTAATGACGCCGCACTCCTTAATCTTTTTCCAGCAGTGCTACTACATAATGGAAGGCCTTaGCACATATGTCACACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HTYTNDAALLNLFPAVLLHNGRP*HICHTG Trigger: ACCAGTGTGACATATGTGGCAAGGCCTTCCATTATG...TAGTAGCACTGCTGGAAAAAGATTAAGGAGTGCGGCGTCATTAGTGTAAGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 |
||
| CDS-3UTR GCA 90 bp | CATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATCATAATGGAAGGCCTTaGCACATATGTCACACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HKQLVTFLLQSGSRRWMNHNGRP*HICHTG Trigger: ACCAGTGTGACATATGTGGCAAGGCCTTCCATTATG...ATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR GCA 90 bp | GAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGGATAATGGAAGGCCTTaGCACATATTTGGCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EHKQLVTFLLQSGSRRWMDNGRP*HIFGTC Trigger: ACAAGTGCCAAATATGTGGCAAGGCCTTCCATTATC...CATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR GCA 90 bp | ACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATAGCTGGTCTCAGGGTGATAATGGAAGGCCTTaGCACATATTTGGCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TFLLQSGSRRWMNSWSQGDNGRP*HIFGTC Trigger: ACAAGTGCCAAATATGTGGCAAGGCCTTCCATTATC...ACCCTGAGACCAGCTATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR TCA 90 bp | ACTAATGACGCCGCACTCCTTAATCTTTTTCCAGCAGTGCTACTACCTTCAGACATGGTTAGAAAGTCTTaGCAGATAATGGAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TNDAALLNLFPAVLLPSDMVRKS*QIMEGL Trigger: AAGGCCTTCCATTATCTGTCAAGACTTTCTAACCAT...GTCTGAAGGTAGTAGCACTGCTGGAAAAAGATTAAGGAGTGCGGCGTCATTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTATTCTCTGATACTGCAGCATCTCAGTCAAACAGATGCTTCCAACTGCAAATGGTTGGAAAGTCTTaGTGGGTAATGAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVFSDTAASQSNRCFQLQMVGKS*WVMKGL Trigger: AAGGCCTTTCATTACCCATCAAGACTTTCCAACCAT...TTGCAGTTGGAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR TCA 90 bp | GGTCTCAGGGTATTCTCTGATACTGCAGCATCTCAGTCAAACAGATGCTTCCAAATGTTCAGAAAGGGATaGTGGAAAACGGAAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: GLRVFSDTAASQSNRCFQMFRKG*WKTEDI Trigger: AATGTCTTCCGTTTTCCATCATCCCTTTCTGAACAT...TTGGAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCTGAGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR TCA 90 bp | AGACTAATGACGCCGCACTCCTTAATCTTTTTCCAGCAGTGCTACTACCTTCAGATGTTCAGAAAGGGATaGTGGAAAACGGAAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: RLMTPHSLIFFQQCYYLQMFRKG*WKTEDI Trigger: AATGTCTTCCGTTTTCCATCATCCCTTTCTGAACAT...CTGAAGGTAGTAGCACTGCTGGAAAAAGATTAAGGAGTGCGGCGTCATTAGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169142.8 |
||
| CDS-3UTR TCA 90 bp | CAACAGGAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGAATGTTCAGAAAGGGATaGTGGAAAACGGAAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: QQEHKQLVTFLLQSGSRRMFRKG*WKTEDI Trigger: AATGTCTTCCGTTTTCCATCATCCCTTTCTGAACAT...TCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATGTTCCTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTCAGGGTATTCTCTGATACTGCAGCATCTCAGTCAAACAGATGCTTCCAAGAAAGCTCTTGTCTTTaGTCCAGAAATGTGACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLRVFSDTAASQSNRCFQESSCL*SRNVTR Trigger: TCTAGTCACATTTCTGGAGCAAAGACAAGAGCTTTC...TTGGAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCTGAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGACAGCAAGGAAGGATCAAACCCAAATCCAGAAGGACAACCACACAGCCAAAGGAATAATGAAGTaGAGAAGGCCTTGCCACATA | + |
|
Preference number: 4 (lower is better) Translates to: KKTARKDQTQIQKDNHTAKGIMK*RRPCHI Trigger: TATGTGGCAAGGCCTTCTGCACTTCATTATTCCTTT...GGCTGTGTGGTTGTCCTTCTGGATTTGGGTTTGATCCTTCCTTGCTGTCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
||
| CDS-3UTR GCA 90 bp | ACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATAGCTGGTCTCAGGGTAAAGGAATAATGAAGTaGAGAAGGCCTTGCCACATA | + |
|
Preference number: 4 (lower is better) Translates to: TFLLQSGSRRWMNSWSQGKGIMK*RRPCHI Trigger: TATGTGGCAAGGCCTTCTGCACTTCATTATTCCTTT...ACCCTGAGACCAGCTATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR CCA 90 bp | ACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATAGCTGGTCTCAGGGTAGTAGTGATGAAAAATaGAAGGACTTGCCACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFLLQSGSRRWMNSWSQGSSDEK*KDLPHS Trigger: AGAGTGTGGCAAGTCCTTCCATTTTTCATCACTACT...ACCCTGAGACCAGCTATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCAGGGTATTCTCTGATACTGCAGCATCTCAGTCAAACAGATGCTTCCAACAGTAGTGATGAAAAATaGAAGGACTTGCCACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSGYSLILQHLSQTDASNSSDEK*KDLPHS Trigger: AGAGTGTGGCAAGTCCTTCCATTTTTCATCACTACT...GTTGGAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCTGAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR CCA 90 bp | GAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAGTAGTGATGAAAAATaGAAGGACTTGCCACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: EHKQLVTFLLQSGSRRWMSSDEK*KDLPHS Trigger: AGAGTGTGGCAAGTCCTTCCATTTTTCATCACTACT...CATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR CCA 90 bp | ACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATAGCTGGTCTCAGGGTCATAAAGTTGTAGTATaGAAGGCCTTGCCACATACT | + |
|
Preference number: 4 (lower is better) Translates to: TFLLQSGSRRWMNSWSQGHKVVV*KALPHT Trigger: AGTATGTGGCAAGGCCTTCCATACTACAACTTTATG...ACCCTGAGACCAGCTATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| 3UTR CAA 72 bp | AGCGTGTTTACAGTTTCAGAGGCTTGTAAGTTATTATaGTGGGAAACTAGCTTGGGAGCATGGTGGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVFTVSEACKLL*WETSLGAWWNA Trigger: TGCATTCCACCATGCTCCCAAGCTAGTTTCCCACAATAATAACTTACAAGCCTCTGAAACTGTAAACACGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTATTCTCTGATACTGCAGCATCTCAGTCAAACAGATGCTTCCAACTGCAAGAAAGCTCTTGTCTTTaGTCCAGAAATGTGACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RVFSDTAASQSNRCFQLQESSCL*SRNVTR Trigger: TCTAGTCACATTTCTGGAGCAAAGACAAGAGCTTTC...TTGCAGTTGGAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR GCA 90 bp | CATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATAAAGGAATAATGAAGTaGAGAAGGCCTTGCCACATA | + |
|
Preference number: 4 (lower is better) Translates to: HKQLVTFLLQSGSRRWMNKGIMK*RRPCHI Trigger: TATGTGGCAAGGCCTTCTGCACTTCATTATTCCTTT...ATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATAGCTGGTCTCAGGGTATTGATAATGGAAGGCCTTaGCACATATTTGGCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLLQSGSRRWMNSWSQGIDNGRP*HIFGTC Trigger: ACAAGTGCCAAATATGTGGCAAGGCCTTCCATTATC...AATACCCTGAGACCAGCTATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTATTCTCTGATACTGCAGCATCTCAGTCAAACAGATGCTTCCAACTGCAAAGTAGTGATGAAAAATaGAAGGACTTGCCACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVFSDTAASQSNRCFQLQSSDEK*KDLPHS Trigger: AGAGTGTGGCAAGTCCTTCCATTTTTCATCACTACT...TTGCAGTTGGAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR TCA 90 bp | CACACTTACACTAATGACGCCGCACTCCTTAATCTTTTTCCAGCAGTGCTACTAGTGTTGAAAAAGTTTTaGTGGAACATGAAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: HTYTNDAALLNLFPAVLLVLKKF*WNMKGL Trigger: AAGGCCTTTCATGTTCCATCAAAACTTTTTCAACAC...TAGTAGCACTGCTGGAAAAAGATTAAGGAGTGCGGCGTCATTAGTGTAAGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 |
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| CDS-3UTR TCA 90 bp | TTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATAGCTGGTCTCAGGGTATTATGGTTAGAAAGTCTTaGCAGATAATGGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: FLLQSGSRRWMNSWSQGIMVRKS*QIMEGL Trigger: AAGGCCTTCCATTATCTGTCAAGACTTTCTAACCAT...AATACCCTGAGACCAGCTATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR GCA 90 bp | TTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATAGCTGGTCTCAGGGTATTGAAAGCTCTTGTCTTTaGTCCAGAAATGTGACTAGA | + |
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Preference number: 4 (lower is better) Translates to: FLLQSGSRRWMNSWSQGIESSCL*SRNVTR Trigger: TCTAGTCACATTTCTGGAGCAAAGACAAGAGCTTTC...AATACCCTGAGACCAGCTATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR GCA 90 bp | TTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATAGCTGGTCTCAGGGTATTAAAGGAATAATGAAGTaGAGAAGGCCTTGCCACATA | + |
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Preference number: 4 (lower is better) Translates to: FLLQSGSRRWMNSWSQGIKGIMK*RRPCHI Trigger: TATGTGGCAAGGCCTTCTGCACTTCATTATTCCTTT...AATACCCTGAGACCAGCTATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR GCA 90 bp | ATGGTGAGAAAGGTAAAACAACAGGAACATAAGCAGCTGGTCACGTTTCTTCTAGATAATGGAAGGCCTTaGCACATATTTGGCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: MVRKVKQQEHKQLVTFLLDNGRP*HIFGTC Trigger: ACAAGTGCCAAATATGTGGCAAGGCCTTCCATTATC...TAGAAGAAACGTGACCAGCTGCTTATGTTCCTGTTGTTTTACCTTTCTCACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR TCA 90 bp | ATGGTGAGAAAGGTAAAACAACAGGAACATAAGCAGCTGGTCACGTTTCTTCTAATGGTTAGAAAGTCTTaGCAGATAATGGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: MVRKVKQQEHKQLVTFLLMVRKS*QIMEGL Trigger: AAGGCCTTCCATTATCTGTCAAGACTTTCTAACCAT...TAGAAGAAACGTGACCAGCTGCTTATGTTCCTGTTGTTTTACCTTTCTCACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR TCA 90 bp | GAGGGCAATAATGGGGAAAGGGAAAACACACATGATTCATACGTATTAAACATCATGTTCAGAAAGGGATaGTGGAAAACGGAAGACATT | + |
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Preference number: 4 (lower is better) Translates to: EGNNGERENTHDSYVLNIMFRKG*WKTEDI Trigger: AATGTCTTCCGTTTTCCATCATCCCTTTCTGAACAT...GATGTTTAATACGTATGAATCATGTGTGTTTTCCCTTTCCCCATTATTGCCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| CDS-3UTR TCA 90 bp | ACTTACGTATCTTCTACCCAACTATTAGTTGCTGGCATCTTTATTTACCAATCAATGGTTGGAAAGTCTTaGTGGGTAATGAAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TYVSSTQLLVAGIFIYQSMVGKS*WVMKGL Trigger: AAGGCCTTTCATTACCCATCAAGACTTTCCAACCAT...TGATTGGTAAATAAAGATGCCAGCAACTAATAGTTGGGTAGAAGATACGTAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| CDS-3UTR GCA 90 bp | ACTTACGTATCTTCTACCCAACTATTAGTTGCTGGCATCTTTATTTACCAATCAAAAAATGGAAGGACTTaGCACACTCTTCACACTTGC | + |
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Preference number: 4 (lower is better) Translates to: TYVSSTQLLVAGIFIYQSKNGRT*HTLHTC Trigger: GCAAGTGTGAAGAGTGTGGCAAGTCCTTCCATTTTT...TGATTGGTAAATAAAGATGCCAGCAACTAATAGTTGGGTAGAAGATACGTAAGT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| 3UTR CAA 72 bp | AATATATGCACACAAGCACAAGTAGAAGGGCTTAATTaGGATCATAGTTCAATTCCATTGTCTACCATGGAG | + |
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Preference number: 4 (lower is better) Translates to: NICTQAQVEGLN*DHSSIPLSTME Trigger: CTCCATGGTAGACAATGGAATTGAACTATGATCCAAATTAAGCCCTTCTACTTGTGCTTGTGTGCATATATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 |
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| 3UTR CAA 72 bp | ATTTTATTAATGTTTGACAATGAGAAATCCCAGCTCTaGGCAGAATCTGCAAGTCCTTCAAAGATGATGATG | + |
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Preference number: 4 (lower is better) Translates to: ILLMFDNEKSQL*AESASPSKMMM Trigger: CATCATCATCTTTGAAGGACTTGCAGATTCTGCCAAGAGCTGGGATTTCTCATTGTCAAACATTAATAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109735.9 ENSMUST00000169142.8 |
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| CDS-3UTR CAA 90 bp | CAAGGAAGGATCAAACCCAAATCCAGAAGGACAACCACACAGCCTGACAGCTCCGAAGTGCAGAAGGCCTaGCCACATACTTCACAGTTG | + |
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Preference number: 5 (lower is better) Translates to: QGRIKPKSRRTTTQPDSSEVQKA*PHTSQL Trigger: CAACTGTGAAGTATGTGGCAAGGCCTTCTGCACTTC...GGAGCTGTCAGGCTGTGTGGTTGTCCTTCTGGATTTGGGTTTGATCCTTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| CDS-3UTR CAA 90 bp | CAGGAAACTGCCCTTACCTCAAATGCTGACCTGCAAGCTGTGGAGAAGCAGAAACCACACTCTTCACACTaGCAGGACTTCACTCCTAAA | + |
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Preference number: 5 (lower is better) Translates to: QETALTSNADLQAVEKQKPHSSH*QDFTPK Trigger: TTTAGGAGTGAAGTCCTGCAAGTGTGAAGAGTGTGG...TTTCTGCTTCTCCACAGCTTGCAGGTCAGCATTTGAGGTAAGGGCAGTTTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| CDS-3UTR CAA 90 bp | GCTGGTCTCAGGGTATTCTCTGATACTGCAGCATCTCAGTCAAACAGATGCTTCCCACACTCTTCACACTaGCAGGACTTCACTCCTAAA | + |
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Preference number: 5 (lower is better) Translates to: AGLRVFSDTAASQSNRCFPHSSH*QDFTPK Trigger: TTTAGGAGTGAAGTCCTGCAAGTGTGAAGAGTGTGG...GAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCTGAGACCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR CAA 90 bp | AAACTGCCCTTACCTCAAATGCTGACCTGCAAGCTGTGGAGAAGCAGAAAACATGAAGTGCAGAAGGCCTaGCCACATACTTCACAGTTG | + |
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Preference number: 5 (lower is better) Translates to: KLPLPQMLTCKLWRSRKHEVQKA*PHTSQL Trigger: CAACTGTGAAGTATGTGGCAAGGCCTTCTGCACTTC...ATGTTTTCTGCTTCTCCACAGCTTGCAGGTCAGCATTTGAGGTAAGGGCAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| CDS-3UTR CAA 90 bp | GGTCTCAGGGTATTCTCTGATACTGCAGCATCTCAGTCAAACAGATGCTTCCAAGAAGTGCAGAAGGCCTaGCCACATACTTCACAGTTG | + |
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Preference number: 5 (lower is better) Translates to: GLRVFSDTAASQSNRCFQEVQKA*PHTSQL Trigger: CAACTGTGAAGTATGTGGCAAGGCCTTCTGCACTTC...TTGGAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCTGAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR CAA 90 bp | GAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGGGACAACGAAACTCCTaGCCACACACTTCACATTTG | + |
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Preference number: 5 (lower is better) Translates to: EHKQLVTFLLQSGSRRWMGQRNS*PHTSHL Trigger: CAAATGTGAAGTGTGTGGCAAGGAGTTTCGTTGTCC...CATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR CAA 90 bp | CAACAGGAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGAGGACAACGAAACTCCTaGCCACACACTTCACATTTG | + |
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Preference number: 5 (lower is better) Translates to: QQEHKQLVTFLLQSGSRRGQRNS*PHTSHL Trigger: CAAATGTGAAGTGTGTGGCAAGGAGTTTCGTTGTCC...TCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATGTTCCTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR CAA 90 bp | CATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATGGACAACGAAACTCCTaGCCACACACTTCACATTTG | + |
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Preference number: 5 (lower is better) Translates to: HKQLVTFLLQSGSRRWMNGQRNS*PHTSHL Trigger: CAAATGTGAAGTGTGTGGCAAGGAGTTTCGTTGTCC...ATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR CAA 90 bp | GAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGCCACATATTTGGCACTaGTATGGTTTGTCTCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: EHKQLVTFLLQSGSRRWMPHIWH*YGLSPV Trigger: CACTGGAGACAAACCATACAAGTGCCAAATATGTGG...CATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR CAA 90 bp | CAACAGGAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGACCACATATTTGGCACTaGTATGGTTTGTCTCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: QQEHKQLVTFLLQSGSRRPHIWH*YGLSPV Trigger: CACTGGAGACAAACCATACAAGTGCCAAATATGTGG...TCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATGTTCCTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR CAA 90 bp | AGGAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGACCACATATTTGGCACTaGTATGGTTTGTCTCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: RNISSWSRFFYSQEAEDGPHIWH*YGLSPV Trigger: CACTGGAGACAAACCATACAAGTGCCAAATATGTGG...TCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATGTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR CAA 90 bp | TTTCTTCTACAGTCAGGAAGCAGAAGATGGATGAATAGCTGGTCTCAGGGTATTCCACACTCTTCACACTaGCAGGACTTCACTCCTAAA | + |
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Preference number: 5 (lower is better) Translates to: FLLQSGSRRWMNSWSQGIPHSSH*QDFTPK Trigger: TTTAGGAGTGAAGTCCTGCAAGTGTGAAGAGTGTGG...AATACCCTGAGACCAGCTATTCATCCATCTTCTGCTTCCTGACTGTAGAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR CAA 90 bp | ATGGTGAGAAAGGTAAAACAACAGGAACATAAGCAGCTGGTCACGTTTCTTCTAGAAGTGCAGAAGGCCTaGCCACATACTTCACAGTTG | + |
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Preference number: 5 (lower is better) Translates to: MVRKVKQQEHKQLVTFLLEVQKA*PHTSQL Trigger: CAACTGTGAAGTATGTGGCAAGGCCTTCTGCACTTC...TAGAAGAAACGTGACCAGCTGCTTATGTTCCTGTTGTTTTACCTTTCTCACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR CAA 90 bp | AGGGTATTCTCTGATACTGCAGCATCTCAGTCAAACAGATGCTTCCAACTGCAACCACATATTTGGCACTaGTATGGTTTGTCTCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: RVFSDTAASQSNRCFQLQPHIWH*YGLSPV Trigger: CACTGGAGACAAACCATACAAGTGCCAAATATGTGG...TTGCAGTTGGAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR CAA 90 bp | GAACATAAGCAGCTGGTCACGTTTCTTCTACAGTCAGGAAGCAGAAGATGGATGTATGGTTGGAAAGTCTaGATGAATAATGGAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: EHKQLVTFLLQSGSRRWMYGWKV*MNNGRP Trigger: AGGCCTTCCATTATTCATCAAGACTTTCCAACCATA...CATCCATCTTCTGCTTCCTGACTGTAGAAGAAACGTGACCAGCTGCTTATGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR CAA 90 bp | GTCTCAGGGTATTCTCTGATACTGCAGCATCTCAGTCAAACAGATGCTTCCAACTATGGTTGGAAAGTCTaGATGAATAATGGAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: VSGYSLILQHLSQTDASNYGWKV*MNNGRP Trigger: AGGCCTTCCATTATTCATCAAGACTTTCCAACCATA...GTTGGAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCTGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR CAA 90 bp | AAACTGCCCTTACCTCAAATGCTGACCTGCAAGCTGTGGAGAAGCAGAAAACATTGTGTTGAAAAAGTTTaGATGGAACATGAAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: KLPLPQMLTCKLWRSRKHCVEKV*MEHERP Trigger: AGGCCTTTCATGTTCCATCAAAACTTTTTCAACACA...ATGTTTTCTGCTTCTCCACAGCTTGCAGGTCAGCATTTGAGGTAAGGGCAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| CDS-3UTR CAA 90 bp | AGGGTATTCTCTGATACTGCAGCATCTCAGTCAAACAGATGCTTCCAACTGCAATATGGTTGGAAAGTCTaGATGAATAATGGAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: RVFSDTAASQSNRCFQLQYGWKV*MNNGRP Trigger: AGGCCTTCCATTATTCATCAAGACTTTCCAACCATA...TTGCAGTTGGAAGCATCTGTTTGACTGAGATGCTGCAGTATCAGAGAATACCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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| CDS-3UTR CAA 90 bp | AGCTCTATCCAAAAAGCTTTAAATCATAACATCCCTTCCCTTTCCCCAAACTTACCACACTCTTCACACTaGCAGGACTTCACTCCTAAA | + |
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Preference number: 5 (lower is better) Translates to: SSIQKALNHNIPSLSPNLPHSSH*QDFTPK Trigger: TTTAGGAGTGAAGTCCTGCAAGTGTGAAGAGTGTGG...TAAGTTTGGGGAAAGGGAAGGGATGTTATGATTTAAAGCTTTTTGGATAGAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168892.9 |
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| CDS-3UTR CAA 90 bp | TGCCGGCACAGGGTTTCTATCCCACTTTTACCATTTAGATATGAAATAAAAACAGGACAACGAAACTCCTaGCCACACACTTCACATTTG | + |
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Preference number: 5 (lower is better) Translates to: CRHRVSIPLLPFRYEIKTGQRNS*PHTSHL Trigger: CAAATGTGAAGTGTGTGGCAAGGAGTTTCGTTGTCC...TGTTTTTATTTCATATCTAAATGGTAAAAGTGGGATAGAAACCCTGTGCCGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109735.9 |
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| CDS-3UTR CAA 90 bp | GTGAGAAAGGTAAAACAACAGGAACATAAGCAGCTGGTCACGTTTCTTCTACAGTATGGTTGGAAAGTCTaGATGAATAATGGAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: VRKVKQQEHKQLVTFLLQYGWKV*MNNGRP Trigger: AGGCCTTCCATTATTCATCAAGACTTTCCAACCATA...CTGTAGAAGAAACGTGACCAGCTGCTTATGTTCCTGTTGTTTTACCTTTCTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109735.9 ENSMUST00000168892.9 ENSMUST00000169142.8 ENSMUST00000171466.2 |
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