Pregenerated sensors for ZFP593 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028840Ensembl transcript IDs: ENSMUST00000030644.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGCCGAGGGAGGCTGCCTAGTACCTGATGGATGCGGGGACTCCTaGGCACTGTCAGCCAAGACTTGGCCTACATGCCTGGCCTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: RAEGGCLVPDGCGDS*ALSAKTWPTCLAWP Trigger: AGGCCAGGCCAGGCATGTAGGCCAAGTCTTGGCTGACAGTGCCCAGGAGTCCCCGCATCCATCAGGTACTAGGCAGCCTCCCTCGGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR GCA 90 bp | CCAGTTCAGACCAGGGCCGAGGGAGGCTGCCTAGTACCTGATGGATaGGGGGACTCCTGGGCACTGTCAGCCAAGACTTGGCCTACATGC | + |
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Preference number: 1 (lower is better) Translates to: PVQTRAEGGCLVPDG*GDSWALSAKTWPTC Trigger: GCATGTAGGCCAAGTCTTGGCTGACAGTGCCCAGGAGTCCCCGCATCCATCAGGTACTAGGCAGCCTCCCTCGGCCCTGGTCTGAACTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR TCA 90 bp | TGTCACGTTCCCTGCTGCCTGACTAGCCGGGACCCAGATGGGCAGTaGGGCGAGAAGGATTGGGGTGGAATCTCCCTGGGGCAGAAATGG | + |
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Preference number: 1 (lower is better) Translates to: CHVPCCLTSRDPDGQ*GEKDWGGISLGQKW Trigger: CCATTTCTGCCCCAGGGAGATTCCACCCCAATCCTTCTCGCCTCACTGCCCATCTGGGTCCCGGCTAGTCAGGCAGCAGGGAACGTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR TCA 90 bp | ACGTCTGATACCCCCAACAGTCAGGCTGTCACGTTCCCTGCTGCCTaGCTAGCCGGGACCCAGATGGGCAGTGAGGCGAGAAGGATTGGG | + |
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Preference number: 1 (lower is better) Translates to: TSDTPNSQAVTFPAA*LAGTQMGSEARRIG Trigger: CCCAATCCTTCTCGCCTCACTGCCCATCTGGGTCCCGGCTAGTCAGGCAGCAGGGAACGTGACAGCCTGACTGTTGGGGGTATCAGACGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR TCA 90 bp | TGCCCCCTGCCAGACTTGGGTAAGCCGGCATCGGTGAGCATCCTCTaGGCATACAGTGCCCAGGCAAATAGGTCAGGGACCCCTATGCTC | + |
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Preference number: 1 (lower is better) Translates to: CPLPDLGKPASVSIL*AYSAQANRSGTPML Trigger: GAGCATAGGGGTCCCTGACCTATTTGCCTGGGCACTGTATGCTCAGAGGATGCTCACCGATGCCGGCTTACCCAAGTCTGGCAGGGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CCA 90 bp | ACCCAGATGGGCAGTGAGGCGAGAAGGATTGGGGTGGAATCTCCCTaGGGCAGAAATGGCGCCTGCATCTTCTTTACCCAGCTGCGCCAT | + |
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Preference number: 1 (lower is better) Translates to: TQMGSEARRIGVESP*GRNGACIFFTQLRH Trigger: ATGGCGCAGCTGGGTAAAGAAGATGCAGGCGCCATTTCTGCCCCAGGGAGATTCCACCCCAATCCTTCTCGCCTCACTGCCCATCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR GCA 90 bp | TGTGGCTACATTGTTGGCTGTCCTCGGGTTAGGTGGCTCCTGCTATaGAGTATGGAAGATGGTGAAGCAGCGGCAACCATCACAGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: CGYIVGCPRVRWLLL*SMEDGEAAATITGP Trigger: GGGGCCTGTGATGGTTGCCGCTGCTTCACCATCTTCCATACTGCATAGCAGGAGCCACCTAACCCGAGGACAGCCAACAATGTAGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR GCA 90 bp | GCGAGAAGGATTGGGGTGGAATCTCCCTGGGGCAGAAATGGCGCCTaGATCTTCTTTACCCAGCTGCGCCATCTTATACCCTTCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: ARRIGVESPWGRNGA*IFFTQLRHLIPFFL Trigger: CAGGAAGAAGGGTATAAGATGGCGCAGCTGGGTAAAGAAGATGCAGGCGCCATTTCTGCCCCAGGGAGATTCCACCCCAATCCTTCTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR GCA 90 bp | GGGATTGTGGCTACATTGTTGGCTGTCCTCGGGTTAGGTGGCTCCTaGTATGCAGTATGGAAGATGGTGAAGCAGCGGCAACCATCACAG | + |
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Preference number: 1 (lower is better) Translates to: GIVATLLAVLGLGGS*YAVWKMVKQRQPSQ Trigger: CTGTGATGGTTGCCGCTGCTTCACCATCTTCCATACTGCATAGCAGGAGCCACCTAACCCGAGGACAGCCAACAATGTAGCCACAATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR GCA 90 bp | CCTGCATCTTCTTTACCCAGCTGCGCCATCTTATACCCTTCTTCCTaGCTAGAAGCCTCAGTTGACCCTTCACGTGCACCCTCTGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: PASSLPSCAILYPSS*LEASVDPSRAPSVL Trigger: GAGCACAGAGGGTGCACGTGAAGGGTCAACTGAGGCTTCTAGGCAGGAAGAAGGGTATAAGATGGCGCAGCTGGGTAAAGAAGATGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CCA 90 bp | CAGGGAGGACAGTGCCCCCACTATGAGATTTCGACGCCTGACTCCTaGCTACTTCCGGGTGCTACAGGTAAGGAAATCTACCTACCTCTT | + |
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Preference number: 1 (lower is better) Translates to: QGGQCPHYEISTPDS*LLPGATGKEIYLPL Trigger: AAGAGGTAGGTAGATTTCCTTACCTGTAGCACCCGGAAGTAGCCAGGAGTCAGGCGTCGAAATCTCATAGTGGGGGCACTGTCCTCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CCA 90 bp | ATAGGTCAGGGACCCCTATGCTCTGGTGTCCACTTCTTGGCACCCTaGGCGACACCCAGTCTTCATTTCTGTTCCCATTTCACAGGCCAA | + |
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Preference number: 1 (lower is better) Translates to: IGQGPLCSGVHFLAP*ATPSLHFCSHFTGQ Trigger: TTGGCCTGTGAAATGGGAACAGAAATGAAGACTGGGTGTCGCCCAGGGTGCCAAGAAGTGGACACCAGAGCATAGGGGTCCCTGACCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR GCA 90 bp | AATCTCCCTGGGGCAGAAATGGCGCCTGCATCTTCTTTACCCAGCTaGGCCATCTTATACCCTTCTTCCTGCCTAGAAGCCTCAGTTGAC | + |
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Preference number: 1 (lower is better) Translates to: NLPGAEMAPASSLPS*AILYPSSCLEASVD Trigger: GTCAACTGAGGCTTCTAGGCAGGAAGAAGGGTATAAGATGGCGCAGCTGGGTAAAGAAGATGCAGGCGCCATTTCTGCCCCAGGGAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CCA 90 bp | AGAGCATCTCCGCAAACCGGAAATCCAAAATACACACTCTCAGCTTaGCTGATGAACCACTGCCCATGGGCAGTTCCTCTGCCCTGCATC | + |
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Preference number: 1 (lower is better) Translates to: RASPQTGNPKYTLSA*LMNHCPWAVPLPCI Trigger: GATGCAGGGCAGAGGAACTGCCCATGGGCAGTGGTTCATCAGCCAAGCTGAGAGTGTGTATTTTGGATTTCCGGTTTGCGGAGATGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CAA 90 bp | CTGAAGGCAGAGCCCCGGAGTCCCCTGGTTGGGATTGTGGCTACATaGTTGGCTGTCCTCGGGTTAGGTGGCTCCTGCTATGCAGTATGG | + |
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Preference number: 2 (lower is better) Translates to: LKAEPRSPLVGIVAT*LAVLGLGGSCYAVW Trigger: CCATACTGCATAGCAGGAGCCACCTAACCCGAGGACAGCCAACAATGTAGCCACAATCCCAACCAGGGGACTCCGGGGCTCTGCCTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTTCATTTCTGTTCCCATTTCACAGGCCAACAGGGAGGACAGTGCCCCCAGGGGTGGAATCTCCCTaGGGCAGAAATGGCGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: QSSFLFPFHRPTGRTVPPGVESP*GRNGAC Trigger: GCAGGCGCCATTTCTGCCCCAGGGAGATTCCACCCC...TGGGGGCACTGTCCTCCCTGTTGGCCTGTGAAATGGGAACAGAAATGAAGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTTCATTTCTGTTCCCATTTCACAGGCCAACAGGGAGGACAGTGCCCCCACACGTGCACCCTCTGTaGTCTCCCAGATGCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: QSSFLFPFHRPTGRTVPPHVHPL*SPRCRW Trigger: CCACCTGCATCTGGGAGAGCACAGAGGGTGCACGTG...TGGGGGCACTGTCCTCCCTGTTGGCCTGTGAAATGGGAACAGAAATGAAGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTAATGGCACAAGCAAACCTTTGTCACCCTCAAGCCCACAAAAGATGTTCAGGTGGCTGGGGAGCTaGAGGCAGAGCCCCGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: QLNGTSKPLSPSSPQKMFRWLGS*RQSPGV Trigger: GACTCCGGGGCTCTGCCTTCAGCTCCCCAGCCACCT...GAACATCTTTTGTGGGCTTGAGGGTGACAAAGGTTTGCTTGTGCCATTAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTTCATTTCTGTTCCCATTTCACAGGCCAACAGGGAGGACAGTGCCCCCAATGAACCACTGCCCATaGGCAGTTCCTCTGCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: QSSFLFPFHRPTGRTVPPMNHCP*AVPLPC Trigger: GCAGGGCAGAGGAACTGCCCATGGGCAGTGGTTCAT...TGGGGGCACTGTCCTCCCTGTTGGCCTGTGAAATGGGAACAGAAATGAAGACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTCCCCCAACGACACGTCTGATACCCCCAACAGTCAGGCTGTCACGTTCCCTCCAGGTCCTTTATTTTaGGCAGAACACCCGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: TSPNDTSDTPNSQAVTFPPGPLF*AEHPEE Trigger: CTCTTCCGGGTGTTCTGCCCAAAATAAAGGACCTGG...AGGGAACGTGACAGCCTGACTGTTGGGGGTATCAGACGTGTCGTTGGGGGAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CAA 90 bp | GAGAGCATCTCCGCAAACCGGAAATCCAAAATACACACTCTCAGCTaGGCTGATGAACCACTGCCCATGGGCAGTTCCTCTGCCCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: ESISANRKSKIHTLS*ADEPLPMGSSSALH Trigger: ATGCAGGGCAGAGGAACTGCCCATGGGCAGTGGTTCATCAGCCAAGCTGAGAGTGTGTATTTTGGATTTCCGGTTTGCGGAGATGCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR-3UTR GCA 90 bp | ACGACACGTCTGATACCCCCAACAGTCAGGCTGTCACGTTCCCTGCTGCCTGACTTATACCCTTCTTCCTaGCTAGAAGCCTCAGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: TTRLIPPTVRLSRSLLPDLYPSS*LEASVD Trigger: GTCAACTGAGGCTTCTAGGCAGGAAGAAGGGTATAA...GTCAGGCAGCAGGGAACGTGACAGCCTGACTGTTGGGGGTATCAGACGTGTCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR-3UTR CCA 90 bp | TATGAGATTTCGACGCCTGACTCCTGGCTACTTCCGGGTGCTACAGGTAAGGAACGAGAAGGATTGGGGTaGAATCTCCCTGGGGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: YEISTPDSWLLPGATGKEREGLG*NLPGAE Trigger: TTCTGCCCCAGGGAGATTCCACCCCAATCCTTCTCG...TTCCTTACCTGTAGCACCCGGAAGTAGCCAGGAGTCAGGCGTCGAAATCTCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCAGGGGGAGGATACCCGTTCCAAAGCTGGACCTAGTAGGGAGTAGACATTACACACTCTCAGCTTaGCTGATGAACCACTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: RSRGRIPVPKLDLVGSRHYTLSA*LMNHCP Trigger: TGGGCAGTGGTTCATCAGCCAAGCTGAGAGTGTGTA...ATGTCTACTCCCTACTAGGTCCAGCTTTGGAACGGGTATCCTCCCCCTGCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGCGACACCCAGTCTTCATTTCTGTTCCCATTTCACAGGCCAACAGGGAGGATCCTGCTATGCAGTATaGAAGATGGTGAAGCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: WATPSLHFCSHFTGQQGGSCYAV*KMVKQR Trigger: CCGCTGCTTCACCATCTTCCATACTGCATAGCAGGA...TCCTCCCTGTTGGCCTGTGAAATGGGAACAGAAATGAAGACTGGGTGTCGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTAATGGCACAAGCAAACCTTTGTCACCCTCAAGCCCACAAAAGATGTTCTCCCTGGGGCAGAAATaGCGCCTGCATCTTCTTTAC | + |
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Preference number: 2 (lower is better) Translates to: QLNGTSKPLSPSSPQKMFSLGQK*RLHLLY Trigger: GTAAAGAAGATGCAGGCGCCATTTCTGCCCCAGGGA...GAACATCTTTTGTGGGCTTGAGGGTGACAAAGGTTTGCTTGTGCCATTAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTAATGGCACAAGCAAACCTTTGTCACCCTCAAGCCCACAAAAGATGTTCTATGGCCTCTTTTGCTaGATGCTCACATCCAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: QLNGTSKPLSPSSPQKMFYGLFC*MLTSSS Trigger: TGAACTGGATGTGAGCATTCAGCAAAAGAGGCCATA...GAACATCTTTTGTGGGCTTGAGGGTGACAAAGGTTTGCTTGTGCCATTAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR TCA 72 bp | ACCCCCAACAGTCAGGCTGTCACGTTCCCTGCTGCCTaGCTAGCCGGGACCCAGATGGGCAGTGAGGCGAGA | + |
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Preference number: 3 (lower is better) Translates to: TPNSQAVTFPAA*LAGTQMGSEAR Trigger: TCTCGCCTCACTGCCCATCTGGGTCCCGGCTAGTCAGGCAGCAGGGAACGTGACAGCCTGACTGTTGGGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR GCA 72 bp | ACCAGGGCCGAGGGAGGCTGCCTAGTACCTGATGGATaGGGGGACTCCTGGGCACTGTCAGCCAAGACTTGG | + |
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Preference number: 3 (lower is better) Translates to: TRAEGGCLVPDG*GDSWALSAKTW Trigger: CCAAGTCTTGGCTGACAGTGCCCAGGAGTCCCCGCATCCATCAGGTACTAGGCAGCCTCCCTCGGCCCTGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CCA 72 bp | GGACCCAGATGGGCAGTGAGGCGAGAAGGATTGGGGTaGAATCTCCCTGGGGCAGAAATGGCGCCTGCATCT | + |
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Preference number: 3 (lower is better) Translates to: GPRWAVRREGLG*NLPGAEMAPAS Trigger: AGATGCAGGCGCCATTTCTGCCCCAGGGAGATTCCACCCCAATCCTTCTCGCCTCACTGCCCATCTGGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CCA 72 bp | AGTGCCCAGGCAAATAGGTCAGGGACCCCTATGCTCTaGTGTCCACTTCTTGGCACCCTGGGCGACACCCAG | + |
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Preference number: 3 (lower is better) Translates to: SAQANRSGTPML*CPLLGTLGDTQ Trigger: CTGGGTGTCGCCCAGGGTGCCAAGAAGTGGACACCAGAGCATAGGGGTCCCTGACCTATTTGCCTGGGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CCA 72 bp | GGAGGCTGCCTAGTACCTGATGGATGCGGGGACTCCTaGGCACTGTCAGCCAAGACTTGGCCTACATGCCTG | + |
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Preference number: 3 (lower is better) Translates to: GGCLVPDGCGDS*ALSAKTWPTCL Trigger: CAGGCATGTAGGCCAAGTCTTGGCTGACAGTGCCCAGGAGTCCCCGCATCCATCAGGTACTAGGCAGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR TCA 72 bp | CCTGCCCCCTGCCAGACTTGGGTAAGCCGGCATCGGTaGGCATCCTCTGAGCATACAGTGCCCAGGCAAATA | + |
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Preference number: 3 (lower is better) Translates to: PAPCQTWVSRHR*ASSEHTVPRQI Trigger: TATTTGCCTGGGCACTGTATGCTCAGAGGATGCTCACCGATGCCGGCTTACCCAAGTCTGGCAGGGGGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR GCA 72 bp | CATACAGTGCCCAGGCAAATAGGTCAGGGACCCCTATaGTCTGGTGTCCACTTCTTGGCACCCTGGGCGACA | + |
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Preference number: 3 (lower is better) Translates to: HTVPRQIGQGPL*SGVHFLAPWAT Trigger: TGTCGCCCAGGGTGCCAAGAAGTGGACACCAGAGCATAGGGGTCCCTGACCTATTTGCCTGGGCACTGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CCA 72 bp | GCTGTCCTCGGGTTAGGTGGCTCCTGCTATGCAGTATaGAAGATGGTGAAGCAGCGGCAACCATCACAGGCC | + |
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Preference number: 3 (lower is better) Translates to: AVLGLGGSCYAV*KMVKQRQPSQA Trigger: GGCCTGTGATGGTTGCCGCTGCTTCACCATCTTCCATACTGCATAGCAGGAGCCACCTAACCCGAGGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CCA 72 bp | GGCAGTGAGGCGAGAAGGATTGGGGTGGAATCTCCCTaGGGCAGAAATGGCGCCTGCATCTTCTTTACCCAG | + |
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Preference number: 3 (lower is better) Translates to: GSEARRIGVESP*GRNGACIFFTQ Trigger: CTGGGTAAAGAAGATGCAGGCGCCATTTCTGCCCCAGGGAGATTCCACCCCAATCCTTCTCGCCTCACTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CCA 72 bp | GAGAAGGATTGGGGTGGAATCTCCCTGGGGCAGAAATaGCGCCTGCATCTTCTTTACCCAGCTGCGCCATCT | + |
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Preference number: 3 (lower is better) Translates to: EKDWGGISLGQK*RLHLLYPAAPS Trigger: AGATGGCGCAGCTGGGTAAAGAAGATGCAGGCGCCATTTCTGCCCCAGGGAGATTCCACCCCAATCCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR-3UTR CAA 90 bp | TGCCTAGTACCTGATGGATGCGGGGACTCCTGGGCACTGTCAGCCAAGACTTGGATTGTGGCTACATTGTaGGCTGTCCTCGGGTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: CLVPDGCGDSWALSAKTWIVATL*AVLGLG Trigger: ACCTAACCCGAGGACAGCCAACAATGTAGCCACAAT...CCAAGTCTTGGCTGACAGTGCCCAGGAGTCCCCGCATCCATCAGGTACTAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CCA 72 bp | GGACCCCTATGCTCTGGTGTCCACTTCTTGGCACCCTaGGCGACACCCAGTCTTCATTTCTGTTCCCATTTC | + |
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Preference number: 3 (lower is better) Translates to: GPLCSGVHFLAP*ATPSLHFCSHF Trigger: GAAATGGGAACAGAAATGAAGACTGGGTGTCGCCCAGGGTGCCAAGAAGTGGACACCAGAGCATAGGGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR-3UTR CAA 90 bp | GGCACCCTGGGCGACACCCAGTCTTCATTTCTGTTCCCATTTCACAGGCCAACAGGGATTGTGGCTACATaGTTGGCTGTCCTCGGGTTA | + |
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Preference number: 3 (lower is better) Translates to: GTLGDTQSSFLFPFHRPTGIVAT*LAVLGL Trigger: TAACCCGAGGACAGCCAACAATGTAGCCACAATCCC...TGTTGGCCTGTGAAATGGGAACAGAAATGAAGACTGGGTGTCGCCCAGGGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR GCA 72 bp | ATTGTTGGCTGTCCTCGGGTTAGGTGGCTCCTGCTATaGAGTATGGAAGATGGTGAAGCAGCGGCAACCATC | + |
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Preference number: 3 (lower is better) Translates to: IVGCPRVRWLLL*SMEDGEAAATI Trigger: GATGGTTGCCGCTGCTTCACCATCTTCCATACTGCATAGCAGGAGCCACCTAACCCGAGGACAGCCAACAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR GCA 72 bp | GCTACATTGTTGGCTGTCCTCGGGTTAGGTGGCTCCTaGTATGCAGTATGGAAGATGGTGAAGCAGCGGCAA | + |
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Preference number: 3 (lower is better) Translates to: ATLLAVLGLGGS*YAVWKMVKQRQ Trigger: TTGCCGCTGCTTCACCATCTTCCATACTGCATAGCAGGAGCCACCTAACCCGAGGACAGCCAACAATGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR GCA 72 bp | TCTTTACCCAGCTGCGCCATCTTATACCCTTCTTCCTaGCTAGAAGCCTCAGTTGACCCTTCACGTGCACCC | + |
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Preference number: 3 (lower is better) Translates to: SLPSCAILYPSS*LEASVDPSRAP Trigger: GGGTGCACGTGAAGGGTCAACTGAGGCTTCTAGGCAGGAAGAAGGGTATAAGATGGCGCAGCTGGGTAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CCA 72 bp | ATCGGAGGTGTGCCCTCTTGTCCAGGTCCTTTATTTTaGGCAGAACACCCGGAAGAGAGCATCTCCGCAAAC | + |
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Preference number: 3 (lower is better) Translates to: IGGVPSCPGPLF*AEHPEESISAN Trigger: GTTTGCGGAGATGCTCTCTTCCGGGTGTTCTGCCCAAAATAAAGGACCTGGACAAGAGGGCACACCTCCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CCA 72 bp | CAGTGCCCCCACTATGAGATTTCGACGCCTGACTCCTaGCTACTTCCGGGTGCTACAGGTAAGGAAATCTAC | + |
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Preference number: 3 (lower is better) Translates to: QCPHYEISTPDS*LLPGATGKEIY Trigger: GTAGATTTCCTTACCTGTAGCACCCGGAAGTAGCCAGGAGTCAGGCGTCGAAATCTCATAGTGGGGGCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGGGATTGTGGCTACATTGTTGGCTGTCCTCGGGTTAGGTGGCTCCTGCTATTCCAGGTCCTTTATTTaGGGCAGAACACCCGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: VGIVATLLAVLGLGGSCYSRSFI*GRTPGR Trigger: TCTTCCGGGTGTTCTGCCCAAAATAAAGGACCTGGA...ATAGCAGGAGCCACCTAACCCGAGGACAGCCAACAATGTAGCCACAATCCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS-3UTR CCA 90 bp | ACGACACGTCTGATACCCCCAACAGTCAGGCTGTCACGTTCCCTGCTGCCTGACATGCAGGCCGCCCCCTaGCAGGTCCGGGTCGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: TTRLIPPTVRLSRSLLPDMQAAP*QVRVGL Trigger: GAGCCCGACCCGGACCTGCCAGGGGGCGGCCTGCAT...GTCAGGCAGCAGGGAACGTGACAGCCTGACTGTTGGGGGTATCAGACGTGTCGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CAA 72 bp | CCCCGGAGTCCCCTGGTTGGGATTGTGGCTACATTGTaGGCTGTCCTCGGGTTAGGTGGCTCCTGCTATGCA | + |
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Preference number: 4 (lower is better) Translates to: PRSPLVGIVATL*AVLGLGGSCYA Trigger: TGCATAGCAGGAGCCACCTAACCCGAGGACAGCCAACAATGTAGCCACAATCCCAACCAGGGGACTCCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CAA 72 bp | GAGCCCCGGAGTCCCCTGGTTGGGATTGTGGCTACATaGTTGGCTGTCCTCGGGTTAGGTGGCTCCTGCTAT | + |
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Preference number: 4 (lower is better) Translates to: EPRSPLVGIVAT*LAVLGLGGSCY Trigger: ATAGCAGGAGCCACCTAACCCGAGGACAGCCAACAATGTAGCCACAATCCCAACCAGGGGACTCCGGGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CAA 72 bp | TGGATGCGGGGACTCCTGGGCACTGTCAGCCAAGACTaGGCCTACATGCCTGGCCTGGCCTCTCTGGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: WMRGLLGTVSQD*AYMPGLASLVN Trigger: ATTTACCAGAGAGGCCAGGCCAGGCATGTAGGCCAAGTCTTGGCTGACAGTGCCCAGGAGTCCCCGCATCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS-3UTR GCA 90 bp | CTTCATTTCTGTTCCCATTTCACAGGCCAACAGGGAGGACAGTGCCCCCACTATCAAGCCAGACAGCGATaGAGGCCGCCCCCTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LHFCSHFTGQQGGQCPHYQARQR*RPPPGR Trigger: CCTGCCAGGGGGCGGCCTGCATCGCTGTCTGGCTTG...ATAGTGGGGGCACTGTCCTCCCTGTTGGCCTGTGAAATGGGAACAGAAATGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS-3UTR GCA 90 bp | GCTCTGGTGTCCACTTCTTGGCACCCTGGGCGACACCCAGTCTTCATTTCTGTTCGAGCCCATGCCCGCTaGCCTCTCAGCTTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALVSTSWHPGRHPVFISVRAHAR*PLSFFL Trigger: CAGGAAGAAGCTGAGAGGGCAGCGGGCATGGGCTCG...AACAGAAATGAAGACTGGGTGTCGCCCAGGGTGCCAAGAAGTGGACACCAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS-3UTR CCA 90 bp | TGCCCTCTTGTCCAGGTCCTTTATTTTGGGCAGAACACCCGGAAGAGAGCATCTCCGGCCGCCGCTTCTTaGCCTTCATCTGGCGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: CPLVQVLYFGQNTRKRASPAAAS*PSSGGL Trigger: TAGCCCGCCAGATGAAGGCCAAGAAGCGGCGGCCGG...AGATGCTCTCTTCCGGGTGTTCTGCCCAAAATAAAGGACCTGGACAAGAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS-3UTR CCA 90 bp | TGCCCTCTTGTCCAGGTCCTTTATTTTGGGCAGAACACCCGGAAGAGAGCATCTCAGTGGACACTTCTGTaGGCACGCCCAGCCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: CPLVQVLYFGQNTRKRASQWTLL*ARPAAG Trigger: CCCAGCGGCTGGGCGTGCCCACAGAAGTGTCCACTG...AGATGCTCTCTTCCGGGTGTTCTGCCCAAAATAAAGGACCTGGACAAGAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS-3UTR GCA 90 bp | CTCTTGTCCAGGTCCTTTATTTTGGGCAGAACACCCGGAAGAGAGCATCTCCGCGAACATACGAGCCCATaGCCGCTGCCCTCTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSRSFILGRTPGREHLREHTSP*PLPSQL Trigger: AAGCTGAGAGGGCAGCGGGCATGGGCTCGTATGTTC...GCGGAGATGCTCTCTTCCGGGTGTTCTGCCCAAAATAAAGGACCTGGACAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CAA 72 bp | ATAGGTCAGGGACCCCTATGCTCTGGTGTCCACTTCTaGGCACCCTGGGCGACACCCAGTCTTCATTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: IGQGPLCSGVHF*APWATPSLHFC Trigger: ACAGAAATGAAGACTGGGTGTCGCCCAGGGTGCCAAGAAGTGGACACCAGAGCATAGGGGTCCCTGACCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS-3UTR CCA 90 bp | GGCTTGGAGGTAGGCGATTCAGGGGAGGGGGCTGCAATATCCGAATCCCACTTTTTCTTGGCCTTCATCTaGCGGGCTAAGGAATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLEVGDSGEGAAISESHFFLAFI*RAKECA Trigger: AGCACATTCCTTAGCCCGCCAGATGAAGGCCAAGAA...AAAGTGGGATTCGGATATTGCAGCCCCCTCCCCTGAATCGCCTACCTCCAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| 3UTR CAA 72 bp | TATCGGAGGTGTGCCCTCTTGTCCAGGTCCTTTATTTaGGGCAGAACACCCGGAAGAGAGCATCTCCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YRRCALLSRSFI*GRTPGREHLRK Trigger: TTTGCGGAGATGCTCTCTTCCGGGTGTTCTGCCCAAAATAAAGGACCTGGACAAGAGGGCACACCTCCGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS-3UTR TCA 90 bp | GGTGCTACAGGTAAGGAAATCTACCTACCTCTTCCTCCCAACTTCCCCCAACGAGGTCTTCAGGTTGGCTaGATCGATGAAGTACCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GATGKEIYLPLPPNFPQRGLQVG*IDEVPR Trigger: GCGAGGTACTTCATCGATTCAGCCAACCTGAAGACC...TCGTTGGGGGAAGTTGGGAGGAAGAGGTAGGTAGATTTCCTTACCTGTAGCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS-3UTR CCA 90 bp | CCTGGTTGGGATTGTGGCTACATTGTTGGCTGTCCTCGGGTTAGGTGGCTCCTGTCTTTGGATCGGAAATaGGTCTTCAGGTTGGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGWDCGYIVGCPRVRWLLSLDRK*VFRLAE Trigger: TTCAGCCAACCTGAAGACCCATTTCCGATCCAAAGA...CAGGAGCCACCTAACCCGAGGACAGCCAACAATGTAGCCACAATCCCAACCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS-3UTR CCA 90 bp | CTCTTGTCCAGGTCCTTTATTTTGGGCAGAACACCCGGAAGAGAGCATCTCCGCTTCAGCCTTTTCTTGTaGTCTTTGGATCGGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSRSFILGRTPGREHLRFSLFL*SLDRKW Trigger: CCATTTCCGATCCAAAGACCACAAGAAAAGGCTGAA...GCGGAGATGCTCTCTTCCGGGTGTTCTGCCCAAAATAAAGGACCTGGACAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS-3UTR CCA 90 bp | GGTGCTACAGGTAAGGAAATCTACCTACCTCTTCCTCCCAACTTCCCCCAACGATTTTCTTGTGGTCTTTaGATCGGAAATGGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GATGKEIYLPLPPNFPQRFSCGL*IGNGSS Trigger: TGAAGACCCATTTCCGATCCAAAGACCACAAGAAAA...TCGTTGGGGGAAGTTGGGAGGAAGAGGTAGGTAGATTTCCTTACCTGTAGCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS CCA 90 bp | GATGAAGTACCTCGCGCAAGCCAGACAGCGATGCAGGCCGCCCCCTaGCAGGTCCGGGTCGGGCTCCGCGTCCGGCTCCGGCTTGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: DEVPRASQTAMQAAP*QVRVGLRVRLRLGP Trigger: CGGCCCAAGCCGGAGCCGGACGCGGAGCCCGACCCGGACCTGCCAGGGGGCGGCCTGCATCGCTGTCTGGCTTGCGCGAGGTACTTCATC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS TCA 90 bp | GGCTCCGGCTTGGGCCGCGGGAGCCCCTGCGGCCTCAGCTCGCGATaGATCTCATCCAGGTCCGGCCGCCGCTTCTTGGCCTTCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSGLGRGSPCGLSSR*ISSRSGRRFLAFIW Trigger: CCAGATGAAGGCCAAGAAGCGGCGGCCGGACCTGGATGAGATTCATCGCGAGCTGAGGCCGCAGGGGCTCCCGCGGCCCAAGCCGGAGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS CCA 90 bp | GCCTCAGCTCGCGATGAATCTCATCCAGGTCCGGCCGCCGCTTCTTaGCCTTCATCTGGCGGGCTAAGGAATGTGCTCGGTGCGCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ASARDESHPGPAAAS*PSSGGLRNVLGARR Trigger: CCGGCGCGCACCGAGCACATTCCTTAGCCCGCCAGATGAAGGCCAAGAAGCGGCGGCCGGACCTGGATGAGATTCATCGCGAGCTGAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS GCA 90 bp | GGGCACGCCCAGCCGCTGGGGTTGAACATACGAGCCCATGCCCGCTaGCCTCTCAGCTTCTTCCTGACTGTAGGGTTCGACACTCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GHAQPLGLNIRAHAR*PLSFFLTVGFDTQL Trigger: CAGCTGAGTGTCGAACCCTACAGTCAGGAAGAAGCTGAGAGGGCAGCGGGCATGGGCTCGTATGTTCAACCCCAGCGGCTGGGCGTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS-3UTR CAA 90 bp | TGGGCGACACCCAGTCTTCATTTCTGTTCCCATTTCACAGGCCAACAGGGAGGATCCGGCCGCCGCTTCTaGGCCTTCATCTGGCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WATPSLHFCSHFTGQQGGSGRRF*AFIWRA Trigger: AGCCCGCCAGATGAAGGCCAAGAAGCGGCGGCCGGA...TCCTCCCTGTTGGCCTGTGAAATGGGAACAGAAATGAAGACTGGGTGTCGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS-3UTR CAA 90 bp | AGAGCCCCGGAGTCCCCTGGTTGGGATTGTGGCTACATTGTTGGCTGTCCTCGGCTTTTCTTGTGGTCTTaGGATCGGAAATGGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RAPESPGWDCGYIVGCPRLFLWS*DRKWVF Trigger: GAAGACCCATTTCCGATCCAAAGACCACAAGAAAAG...CCGAGGACAGCCAACAATGTAGCCACAATCCCAACCAGGGGACTCCGGGGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS TCA 90 bp | CCTTTTCTTGTGGTCTTTGGATCGGAAATGGGTCTTCAGGTTGGCTaGATCGATGAAGTACCTCGCGCAAGCCAGACAGCGATGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PFLVVFGSEMGLQVG*IDEVPRASQTAMQA Trigger: GGCCTGCATCGCTGTCTGGCTTGCGCGAGGTACTTCATCGATTCAGCCAACCTGAAGACCCATTTCCGATCCAAAGACCACAAGAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS CCA 90 bp | ACACTCAGCTGCTTCAGCCTTTTCTTGTGGTCTTTGGATCGGAAATaGGTCTTCAGGTTGGCTGAATCGATGAAGTACCTCGCGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLSCFSLFLWSLDRK*VFRLAESMKYLAQA Trigger: GGCTTGCGCGAGGTACTTCATCGATTCAGCCAACCTGAAGACCCATTTCCGATCCAAAGACCACAAGAAAAGGCTGAAGCAGCTGAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS-3UTR CAA 90 bp | AGAAGCAGGGGGAGGATACCCGTTCCAAAGCTGGACCTAGTAGGGAGTAGACATAAATGGGTCTTCAGGTaGGCTGAATCGATGAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: RSRGRIPVPKLDLVGSRHKWVFR*AESMKY Trigger: GTACTTCATCGATTCAGCCAACCTGAAGACCCATTT...ATGTCTACTCCCTACTAGGTCCAGCTTTGGAACGGGTATCCTCCCCCTGCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS-3UTR CAA 90 bp | GTTGGGATTGTGGCTACATTGTTGGCTGTCCTCGGGTTAGGTGGCTCCTGCTATTGCTTCAGCCTTTTCTaGTGGTCTTTGGATCGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VGIVATLLAVLGLGGSCYCFSLF*WSLDRK Trigger: TTTCCGATCCAAAGACCACAAGAAAAGGCTGAAGCA...ATAGCAGGAGCCACCTAACCCGAGGACAGCCAACAATGTAGCCACAATCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS CCA 72 bp | CCTCGCGCAAGCCAGACAGCGATGCAGGCCGCCCCCTaGCAGGTCCGGGTCGGGCTCCGCGTCCGGCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: PRASQTAMQAAP*QVRVGLRVRLR Trigger: CCGGAGCCGGACGCGGAGCCCGACCCGGACCTGCCAGGGGGCGGCCTGCATCGCTGTCTGGCTTGCGCGAGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS TCA 72 bp | TTGGGCCGCGGGAGCCCCTGCGGCCTCAGCTCGCGATaGATCTCATCCAGGTCCGGCCGCCGCTTCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGRGSPCGLSSR*ISSRSGRRFLA Trigger: GGCCAAGAAGCGGCGGCCGGACCTGGATGAGATTCATCGCGAGCTGAGGCCGCAGGGGCTCCCGCGGCCCAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS GCA 72 bp | GAATCGATGAAGTACCTCGCGCAAGCCAGACAGCGATaGAGGCCGCCCCCTGGCAGGTCCGGGTCGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: ESMKYLAQARQR*RPPPGRSGSGS Trigger: GGAGCCCGACCCGGACCTGCCAGGGGGCGGCCTGCATCGCTGTCTGGCTTGCGCGAGGTACTTCATCGATTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS CCA 72 bp | TCATCCAGGTCCGGCCGCCGCTTCTTGGCCTTCATCTaGCGGGCTAAGGAATGTGCTCGGTGCGCGCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSRSGRRFLAFI*RAKECARCAPV Trigger: GACCGGCGCGCACCGAGCACATTCCTTAGCCCGCCAGATGAAGGCCAAGAAGCGGCGGCCGGACCTGGATGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS TCA 72 bp | GTGGACACTTCTGTGGGCACGCCCAGCCGCTGGGGTTaGACATACGAGCCCATGCCCGCTGCCCTCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VDTSVGTPSRWG*TYEPMPAALSA Trigger: AGCTGAGAGGGCAGCGGGCATGGGCTCGTATGTTCAACCCCAGCGGCTGGGCGTGCCCACAGAAGTGTCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS CAA 72 bp | AGTGGACACTTCTGTGGGCACGCCCAGCCGCTGGGGTaGAACATACGAGCCCATGCCCGCTGCCCTCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SGHFCGHAQPLG*NIRAHARCPLS Trigger: GCTGAGAGGGCAGCGGGCATGGGCTCGTATGTTCAACCCCAGCGGCTGGGCGTGCCCACAGAAGTGTCCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS CAA 90 bp | AGGGATATCAGTGGACACTTCTGTGGGCACGCCCAGCCGCTGGGGTaGAACATACGAGCCCATGCCCGCTGCCCTCTCAGCTTCTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RDISGHFCGHAQPLG*NIRAHARCPLSFFL Trigger: CAGGAAGAAGCTGAGAGGGCAGCGGGCATGGGCTCGTATGTTCAACCCCAGCGGCTGGGCGTGCCCACAGAAGTGTCCACTGATATCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS CCA 72 bp | CGCGATGAATCTCATCCAGGTCCGGCCGCCGCTTCTTaGCCTTCATCTGGCGGGCTAAGGAATGTGCTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: RDESHPGPAAAS*PSSGGLRNVLG Trigger: ACCGAGCACATTCCTTAGCCCGCCAGATGAAGGCCAAGAAGCGGCGGCCGGACCTGGATGAGATTCATCGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS TCA 72 bp | TGGATCGGAAATGGGTCTTCAGGTTGGCTGAATCGATaGAGTACCTCGCGCAAGCCAGACAGCGATGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: WIGNGSSGWLNR*STSRKPDSDAG Trigger: GCCTGCATCGCTGTCTGGCTTGCGCGAGGTACTTCATCGATTCAGCCAACCTGAAGACCCATTTCCGATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS TCA 72 bp | GTGGTCTTTGGATCGGAAATGGGTCTTCAGGTTGGCTaGATCGATGAAGTACCTCGCGCAAGCCAGACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: VVFGSEMGLQVG*IDEVPRASQTA Trigger: CGCTGTCTGGCTTGCGCGAGGTACTTCATCGATTCAGCCAACCTGAAGACCCATTTCCGATCCAAAGACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS CAA 90 bp | TTCAGCCTTTTCTTGTGGTCTTTGGATCGGAAATGGGTCTTCAGGTaGGCTGAATCGATGAAGTACCTCGCGCAAGCCAGACAGCGATGC | + |
|
Preference number: 6 (lower is better) Translates to: FSLFLWSLDRKWVFR*AESMKYLAQARQRC Trigger: GCATCGCTGTCTGGCTTGCGCGAGGTACTTCATCGATTCAGCCAACCTGAAGACCCATTTCCGATCCAAAGACCACAAGAAAAGGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS CAA 72 bp | TTCTTGTGGTCTTTGGATCGGAAATGGGTCTTCAGGTaGGCTGAATCGATGAAGTACCTCGCGCAAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FLWSLDRKWVFR*AESMKYLAQAR Trigger: TCTGGCTTGCGCGAGGTACTTCATCGATTCAGCCAACCTGAAGACCCATTTCCGATCCAAAGACCACAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS CAA 72 bp | TCGACACTCAGCTGCTTCAGCCTTTTCTTGTGGTCTTaGGATCGGAAATGGGTCTTCAGGTTGGCTGAATCG | + |
|
Preference number: 6 (lower is better) Translates to: STLSCFSLFLWS*DRKWVFRLAES Trigger: CGATTCAGCCAACCTGAAGACCCATTTCCGATCCAAAGACCACAAGAAAAGGCTGAAGCAGCTGAGTGTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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| CDS CCA 72 bp | TGCTTCAGCCTTTTCTTGTGGTCTTTGGATCGGAAATaGGTCTTCAGGTTGGCTGAATCGATGAAGTACCTC | + |
|
Preference number: 6 (lower is better) Translates to: CFSLFLWSLDRK*VFRLAESMKYL Trigger: GAGGTACTTCATCGATTCAGCCAACCTGAAGACCCATTTCCGATCCAAAGACCACAAGAAAAGGCTGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030644.8 |
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