RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP592 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000005621

Ensembl transcript IDs: ENSMUST00000107353.3

Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGACGACATCAGGGACACCGCATGTGCAAACGCAGGGCCCTCCTTaGGGTGACAAGGCACTGGAGGATCTGACATTAAGGGGCACCCTG +
Preference number: 1 (lower is better)
Translates to: ETTSGTPHVQTQGPP*GDKALEDLTLRGTL
Trigger: CAGGGTGCCCCTTAATGTCAGATCCTCCAGTGCCTTGTCACCCCAAGGAGGGCCCTGCGTTTGCACATGCGGTGTCCCTGATGTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 90 bp ACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTGCTAGGGACTaGCTGAGGGCAGCACAGGTTTCCCACAGCAGGTCCTATTCTACT +
Preference number: 1 (lower is better)
Translates to: TSAERGAHEDEGARD*LRAAQVSHSRSYST
Trigger: AGTAGAATAGGACCTGCTGTGGGAAACCTGTGCTGCCCTCAGCCAGTCCCTAGCACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR TCA 90 bp CTAATGCTGCCAGGCCAGTCCTTGGAGGTGGCTCTTGACCAGTACTaGCACCCCACCACACCACCCTGCTCCTTTAGAACTCTCCAGAGA +
Preference number: 1 (lower is better)
Translates to: LMLPGQSLEVALDQY*HPTTPPCSFRTLQR
Trigger: TCTCTGGAGAGTTCTAAAGGAGCAGGGTGGTGTGGTGGGGTGTCAGTACTGGTCAAGAGCCACCTCCAAGGACTGGCCTGGCAGCATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR GCA 90 bp AAACCCACCACAGCCCCAAAGAGGATCTGGCTCTTGGCACCTGCCTaGCTTGGCCATACTTCGTGCTTCTCTCAGGTCGAAACAGGAGTG +
Preference number: 1 (lower is better)
Translates to: KPTTAPKRIWLLAPA*LGHTSCFSQVETGV
Trigger: CACTCCTGTTTCGACCTGAGAGAAGCACGAAGTATGGCCAAGGCAGGCAGGTGCCAAGAGCCAGATCCTCTTTGGGGCTGTGGTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR GCA 90 bp AGGAAAACCCACCACAGCCCCAAAGAGGATCTGGCTCTTGGCACCTaGCTGCCTTGGCCATACTTCGTGCTTCTCTCAGGTCGAAACAGG +
Preference number: 1 (lower is better)
Translates to: RKTHHSPKEDLALGT*LPWPYFVLLSGRNR
Trigger: CCTGTTTCGACCTGAGAGAAGCACGAAGTATGGCCAAGGCAGGCAGGTGCCAAGAGCCAGATCCTCTTTGGGGCTGTGGTGGGTTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 90 bp TTGCTTCAGATGGGGCAGTCAGGGCTGTCTGGGAAGAGTCTCAGGTaGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCC +
Preference number: 1 (lower is better)
Translates to: LLQMGQSGLSGKSLR*SREGLAHQKRNTRA
Trigger: GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACTCTTCCCAGACAGCCCTGACTGCCCCATCTGAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR TCA 90 bp GCTGGCTGCAGCCAGAGCAGCCCTGTCACTAAGGCAGCACAGGTTTaGCTCAGCACCGTCATCACAGGTAGCCCAATATGTCTGTCATTT +
Preference number: 1 (lower is better)
Translates to: AGCSQSSPVTKAAQV*LSTVITGSPICLSF
Trigger: AAATGACAGACATATTGGGCTACCTGTGATGACGGTGCTGAGTCAAACCTGTGCTGCCTTAGTGACAGGGCTGCTCTGGCTGCAGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR GCA 90 bp GCTCAGAATAGACACTGCTCCAGAGCACAGTGGCCACACAAACACTaGGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAG +
Preference number: 1 (lower is better)
Translates to: AQNRHCSRAQWPHKH*DRALYFPRSAQQLE
Trigger: CTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTTGTGTGGCCACTGTGCTCTGGAGCAGTGTCTATTCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR GCA 90 bp CTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAATaGTCATTAAAATGGTGTGTACAGCAGAGCCTCTCTGGAACCGAG +
Preference number: 1 (lower is better)
Translates to: LSAGEAEKWRPCQKE*SLKWCVQQSLSGTE
Trigger: CTCGGTTCCAGAGAGGCTCTGCTGTACACACCATTTTAATGAGCATTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR GCA 90 bp TGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTaGCAGAAAGAATGCTCATTAAAATGGTGTGTACAGCAGAGCCTC +
Preference number: 1 (lower is better)
Translates to: CFPSLSAGEAEKWRP*QKECSLKWCVQQSL
Trigger: GAGGCTCTGCTGTACACACCATTTTAATGAGCATTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 90 bp TATCCAGAACCCACAGCTCAGAATAGACACTGCTCCAGAGCACAGTaGCCACACAAACACTGCGACAGAGCTCTTTATTTCCCACGGTCT +
Preference number: 1 (lower is better)
Translates to: YPEPTAQNRHCSRAQ*PHKHCDRALYFPRS
Trigger: AGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTTGTGTGGCCACTGTGCTCTGGAGCAGTGTCTATTCTGAGCTGTGGGTTCTGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 90 bp GGCTCCACCCTTAGTTTCTCCACCTTCTTTGTTCTCCAGCTCCCATaGTTTCTGAGTGGGAAGAAATGCAGCCATACAGCTCAAAGCCCT +
Preference number: 1 (lower is better)
Translates to: GSTLSFSTFFVLQLP*FLSGKKCSHTAQSP
Trigger: AGGGCTTTGAGCTGTATGGCTGCATTTCTTCCCACTCAGAAACCATGGGAGCTGGAGAACAAAGAAGGTGGAGAAACTAAGGGTGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 90 bp GAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAATGCTCATTAAAATaGTGTGTACAGCAGAGCCTCTCTGGAACCGAGGCAAGCACTAAC +
Preference number: 1 (lower is better)
Translates to: EAEKWRPCQKECSLK*CVQQSLSGTEASTN
Trigger: GTTAGTGCTTGCCTCGGTTCCAGAGAGGCTCTGCTGTACACACCATTTTAATGAGCATTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 90 bp AGTAGGGCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTaGAGGCCTTGCCAGAAAGAATGCTCATTAAAATGGTGTGTACAG +
Preference number: 1 (lower is better)
Translates to: SRACFPSLSAGEAEK*RPCQKECSLKWCVQ
Trigger: CTGTACACACCATTTTAATGAGCATTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGCCCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR TCA 90 bp CCCTTAGTTTCTCCACCTTCTTTGTTCTCCAGCTCCCATGGTTTCTaGGTGGGAAGAAATGCAGCCATACAGCTCAAAGCCCTCCTTAAG +
Preference number: 1 (lower is better)
Translates to: PLVSPPSLFSSSHGF*VGRNAAIQLKALLK
Trigger: CTTAAGGAGGGCTTTGAGCTGTATGGCTGCATTTCTTCCCACTCAGAAACCATGGGAGCTGGAGAACAAAGAAGGTGGAGAAACTAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR TCA 90 bp GTTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTaGTATGAGGACAGTGGCTCCACCCTTAGTTTCTCCACCTTCTTT +
Preference number: 1 (lower is better)
Translates to: VSHSRSYSTIPRGWI*YEDSGSTLSFSTFF
Trigger: AAAGAAGGTGGAGAAACTAAGGGTGGAGCCACTGTCCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 90 bp GATACACAAGGTAGAGATAACAATGAGGAACTCTGGCAAGGGCACTaGAAGCTGACCTCCACCAAGAACTTTACTTTTTATTGTATGTTC +
Preference number: 1 (lower is better)
Translates to: DTQGRDNNEELWQGH*KLTSTKNFTFYCMF
Trigger: GAACATACAATAAAAAGTAAAGTTCTTGGTGGAGGTCAGCTTCCAGTGCCCTTGCCAGAGTTCCTCATTGTTATCTCTACCTTGTGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR TCA 90 bp AAGGTAGAGATAACAATGAGGAACTCTGGCAAGGGCACTGGAAGCTaGCCTCCACCAAGAACTTTACTTTTTATTGTATGTTCATTTGTA +
Preference number: 1 (lower is better)
Translates to: KVEITMRNSGKGTGS*PPPRTLLFIVCSFV
Trigger: TACAAATGAACATACAATAAAAAGTAAAGTTCTTGGTGGAGGTCAGCTTCCAGTGCCCTTGCCAGAGTTCCTCATTGTTATCTCTACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR GCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTCCCACCACACCACCCTaGTCCTTTAGAACTCTCCAG +
Preference number: 2 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGPTTPP*SFRTLQ
Trigger: CTGGAGAGTTCTAAAGGAGCAGGGTGGTGTGGTGGG...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CAA 90 bp GACAAGGCACTGGAGGATCTGACATTAAGGGGCACCCTGCCTTTTTaGGGAACTAGAAGGGTGGGCTTTGGATGGCTCCACACTGCTGAC +
Preference number: 2 (lower is better)
Translates to: DKALEDLTLRGTLPF*GTRRVGFGWLHTAD
Trigger: GTCAGCAGTGTGGAGCCATCCAAAGCCCACCCTTCTAGTTCCCAAAAAAGGCAGGGTGCCCCTTAATGTCAGATCCTCCAGTGCCTTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR TCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCACAGGAAGGAAAGGGTaGACAAGGGACCTCACCAAG +
Preference number: 2 (lower is better)
Translates to: SLRWSREGLAHQKRNTRATGRKG*TRDLTK
Trigger: CTTGGTGAGGTCCCTTGTTCACCCTTTCCTTCCTGT...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR GCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTTTATTTCCCACGGTCTaGACAGCAGCTGGAGGGTAC +
Preference number: 2 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGLFPTV*TAAGGY
Trigger: GTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAA...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR GCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCACCCCAATATCTGTGTaGCACACACCCCACCTGTCA +
Preference number: 2 (lower is better)
Translates to: SLRWSREGLAHQKRNTRATPISV*HTPHLS
Trigger: TGACAGGTGGGGTGTGTGGCACACAGATATTGGGGT...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CCA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAGCTGTGAAGAATTCTaGGTGACCCCACATTTTGGG +
Preference number: 2 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQSCEEF*VTPHFG
Trigger: CCCAAAATGTGGGGTCACCCAGAATTCTTCACAGCT...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGCTGGGAAAGGGGCAGTaGCTGGCTTGGGACCCGCTC +
Preference number: 2 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRLGKGQ*LAWDPL
Trigger: GAGCGGGTCCCAAGCCAGCCACTGCCCCTTTCCCAG...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGGGTCTGCACAGCAGCTaGAGGGTACCACAGCCCGAC +
Preference number: 2 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRGLHSS*RVPQPD
Trigger: GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACC...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR TCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTTATTCATGCCTCCCTTaGAAGATCAAGCCTAGGAAC +
Preference number: 2 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGYSCLP*KIKPRN
Trigger: GTTCCTAGGCTTGATCTTTCAAGGGAGGCATGAATA...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR GCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTTACCAAGTCTGGATTTaGTGTGGCAATAGCAGTCTC +
Preference number: 2 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGYQVWI*CGNSSL
Trigger: GAGACTGCTATTGCCACAGCAAATCCAGACTTGGTA...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CAA 90 bp TTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTaGCCAGAAAGAATGCTCATTAAAATGGTGTGTACAGCAGAGCCT +
Preference number: 2 (lower is better)
Translates to: LLPFTVSWGSREVEA*PERMLIKMVCTAEP
Trigger: AGGCTCTGCTGTACACACCATTTTAATGAGCATTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR TCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTGGCAATAGCAGTCTCTaGATGTTGTATGAATGTCAC +
Preference number: 2 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGGNSSL*MLYECH
Trigger: GTGACATTCATACAACATTCAGAGACTGCTATTGCC...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR GCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGCCACCTGTCAGGGATTaGAGGACAGCAGCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRPPVRD*RTAAEG
Trigger: TCCTTCTGCTGCTGTCCTGCAATCCCTGACAGGTGG...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGTGCTCCAGAGCACAGTaGCCACACAAACACTGCGAC +
Preference number: 2 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRCSRAQ*PHKHCD
Trigger: GTCGCAGTGTTTGTGTGGCCACTGTGCTCTGGAGCA...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CCA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAAGCCCCAAAGAGGATCTaGCTCTTGGCACCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQAPKRI*LLAPAC
Trigger: GCAGGCAGGTGCCAAGAGCCAGATCCTCTTTGGGGC...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGCCCTTCACTGTCAGCTaGGGAAGCAGAGAAGTGGAG +
Preference number: 2 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRPFTVS*GSREVE
Trigger: CTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGG...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR GCA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAACTCTTGGCACCTGCCTaGCTTGGCCATACTTCGTGC +
Preference number: 2 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQLLAPA*LGHTSC
Trigger: GCACGAAGTATGGCCAAGGCAGGCAGGTGCCAAGAG...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR TCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGCATGAGGTGAAGGACTaGCGGGATCTGAAGAGAAAG +
Preference number: 2 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRHEVKD*RDLKRK
Trigger: CTTTCTCTTCAGATCCCGTCAGTCCTTCACCTCATG...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR GCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGGTGGGCAGCAGGAAATaGTGTTTTGCTTCAGATGGG +
Preference number: 2 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRVGSRK*CFASDG
Trigger: CCCATCTGAAGCAAAACAGCATTTCCTGCTGCCCAC...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR GCA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAAGCTCAGAATAGACACTaGTCCAGAGCACAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQAQNRH*SRAQWP
Trigger: TGGCCACTGTGCTCTGGAGCAGTGTCTATTCTGAGC...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR GCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGGAAACAGGAGTGTACTaGCATTTTTCCCACCCACAG +
Preference number: 2 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRETGVY*HFSHPQ
Trigger: CTGTGGGTGGGAAAAATGGCAGTACACTCCTGTTTC...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR TCA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAAGATCAGAGTGACAGGTaGAGTCCTCAGGATGATTCT +
Preference number: 2 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQDQSDR*SPQDDS
Trigger: AGAATCATCCTGAGGACTTCACCTGTCACTCTGATC...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCGGCACCTGCCTGCCTTaGCCATACTTCGTGCTTCTC +
Preference number: 2 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFGTCLP*PYFVLL
Trigger: GAGAAGCACGAAGTATGGCCAAGGCAGGCAGGTGCC...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCTGCCAGGCCAGTCCTTaGAGGTGGCTCTTGACCAGT +
Preference number: 2 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFCQASP*RWLLTS
Trigger: ACTGGTCAAGAGCCACCTCCAAGGACTGGCCTGGCA...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGCATTTCTACCAAGTCTaGATTTGCTGTGGCAATAGC +
Preference number: 2 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRHFYQV*ICCGNS
Trigger: GCTATTGCCACAGCAAATCCAGACTTGGTAGAAATG...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCCTAGCCCGAGCCTGTTaGGTCCAAGAACACCTTCCC +
Preference number: 2 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFLARAC*VQEHLP
Trigger: GGGAAGGTGTTCTTGGACCCAACAGGCTCGGGCTAG...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR TCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCCCAAGAGGCTGGATCTaGTATGAGGACAGTGGCTCC +
Preference number: 2 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFPRGWI*YEDSGS
Trigger: GGAGCCACTGTCCTCATATCAGATCCAGCCTCTTGG...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGGACATGGATGAGAATTaGGGTATCAATAAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRDMDEN*GINKQH
Trigger: ATGCTGCTTATTGATACCCCAATTCTCATCCATGTC...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCCTCACCAAGCCAAGCTaGGCAGAGTTCCCAGAGGAA +
Preference number: 2 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFLTKPS*AEFPEE
Trigger: TTCCTCTGGGAACTCTGCCCAGCTTGGCTTGGTGAG...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR TCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCGCAATCAGGAGATACTaGCTCGAAGGGAACCGTGTG +
Preference number: 2 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFAIRRY*LEGNRV
Trigger: CACACGGTTCCCTTCGAGTCAGTATCTCCTGATTGC...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCCTGTTTTGCTTCAGATaGGGCAGTCAGGGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFLFCFR*GSQGCL
Trigger: CAGACAGCCCTGACTGCCCCATCTGAAGCAAAACAG...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR TCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCGCAAATTCAGAGCTGTaGAGAATTCTGGGTGACCCC +
Preference number: 2 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFANSEL*RILGDP
Trigger: GGGGTCACCCAGAATTCTTCACAGCTCTGAATTTGC...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR GCA 72 bp GGGCAGTGGCTGGCTTGGGACCCGCTCAGTAGGGCTTaGTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAG +
Preference number: 3 (lower is better)
Translates to: GQWLAWDPLSRA*FPSLSAGEAEK
Trigger: CTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGCCCTACTGAGCGGGTCCCAAGCCAGCCACTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR TCA 72 bp GCTAATGCTGCCAGGCCAGTCCTTGGAGGTGGCTCTTaGCCAGTACTGACACCCCACCACACCACCCTGCTC +
Preference number: 3 (lower is better)
Translates to: ANAARPVLGGGS*PVLTPHHTTLL
Trigger: GAGCAGGGTGGTGTGGTGGGGTGTCAGTACTGGTCAAGAGCCACCTCCAAGGACTGGCCTGGCAGCATTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR GCA 72 bp AACCCCAGTGAGAGACGACATCAGGGACACCGCATGTaGAAACGCAGGGCCCTCCTTGGGGTGACAAGGCAC +
Preference number: 3 (lower is better)
Translates to: NPSERRHQGHRM*KRRALLGVTRH
Trigger: GTGCCTTGTCACCCCAAGGAGGGCCCTGCGTTTGCACATGCGGTGTCCCTGATGTCGTCTCTCACTGGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR TCA 72 bp GACACCGCATGTGCAAACGCAGGGCCCTCCTTGGGGTaGCAAGGCACTGGAGGATCTGACATTAAGGGGCAC +
Preference number: 3 (lower is better)
Translates to: DTACANAGPSLG*QGTGGSDIKGH
Trigger: GTGCCCCTTAATGTCAGATCCTCCAGTGCCTTGTCACCCCAAGGAGGGCCCTGCGTTTGCACATGCGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 72 bp TGCTGTTTTGCTTCAGATGGGGCAGTCAGGGCTGTCTaGGAAGAGTCTCAGGTGGAGCAGGGAAGGGCTAGC +
Preference number: 3 (lower is better)
Translates to: CCFASDGAVRAV*EESQVEQGRAS
Trigger: GCTAGCCCTTCCCTGCTCCACCTGAGACTCTTCCCAGACAGCCCTGACTGCCCCATCTGAAGCAAAACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 72 bp TATGTGAAGGAACTGGGAAAGGGGCAGTGGCTGGCTTaGGACCCGCTCAGTAGGGCTTGCTTCCCTTCACTG +
Preference number: 3 (lower is better)
Translates to: YVKELGKGQWLA*DPLSRACFPSL
Trigger: CAGTGAAGGGAAGCAAGCCCTACTGAGCGGGTCCCAAGCCAGCCACTGCCCCTTTCCCAGTTCCTTCACATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 72 bp AAAGCAGGGTATGTGAAGGAACTGGGAAAGGGGCAGTaGCTGGCTTGGGACCCGCTCAGTAGGGCTTGCTTC +
Preference number: 3 (lower is better)
Translates to: KAGYVKELGKGQ*LAWDPLSRACF
Trigger: GAAGCAAGCCCTACTGAGCGGGTCCCAAGCCAGCCACTGCCCCTTTCCCAGTTCCTTCACATACCCTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 72 bp TCAGGGACACCGCATGTGCAAACGCAGGGCCCTCCTTaGGGTGACAAGGCACTGGAGGATCTGACATTAAGG +
Preference number: 3 (lower is better)
Translates to: SGTPHVQTQGPP*GDKALEDLTLR
Trigger: CCTTAATGTCAGATCCTCCAGTGCCTTGTCACCCCAAGGAGGGCCCTGCGTTTGCACATGCGGTGTCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CAA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCTGGCACCTGCCTGCCTaGGCCATACTTCGTGCTTCT +
Preference number: 3 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAWHLPA*AILRAS
Trigger: AGAAGCACGAAGTATGGCCAAGGCAGGCAGGTGCCA...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR GCA 72 bp ACAGCCCCAAAGAGGATCTGGCTCTTGGCACCTGCCTaGCTTGGCCATACTTCGTGCTTCTCTCAGGTCGAA +
Preference number: 3 (lower is better)
Translates to: TAPKRIWLLAPA*LGHTSCFSQVE
Trigger: TTCGACCTGAGAGAAGCACGAAGTATGGCCAAGGCAGGCAGGTGCCAAGAGCCAGATCCTCTTTGGGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 72 bp TCCCGTGGGCAGCAGGAAATGCTGTTTTGCTTCAGATaGGGCAGTCAGGGCTGTCTGGGAAGAGTCTCAGGT +
Preference number: 3 (lower is better)
Translates to: SRGQQEMLFCFR*GSQGCLGRVSG
Trigger: ACCTGAGACTCTTCCCAGACAGCCCTGACTGCCCCATCTGAAGCAAAACAGCATTTCCTGCTGCCCACGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR TCA 72 bp AACAAGAGTGTAGCCGAGAGGAGGAGCTGGCCTTCCTaGGGCAGCAGCAGCTCTAATGGCACAGGAACAAAA +
Preference number: 3 (lower is better)
Translates to: NKSVAERRSWPS*GSSSSNGTGTK
Trigger: TTTTGTTCCTGTGCCATTAGAGCTGCTGCTGCCTCAGGAAGGCCAGCTCCTCCTCTCGGCTACACTCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR TCA 72 bp AAACGGGCCCCGTTCCTAACTGAACCCCACATCCAGTaGGATGAGCTCCACCTCACTGTGTCTACAAGTGCA +
Preference number: 3 (lower is better)
Translates to: KRAPFLTEPHIQ*DELHLTVSTSA
Trigger: TGCACTTGTAGACACAGTGAGGTGGAGCTCATCTCACTGGATGTGGGGTTCAGTTAGGAACGGGGCCCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR TCA 72 bp AGCCAGAGCAGCCCTGTCACTAAGGCAGCACAGGTTTaGCTCAGCACCGTCATCACAGGTAGCCCAATATGT +
Preference number: 3 (lower is better)
Translates to: SQSSPVTKAAQV*LSTVITGSPIC
Trigger: ACATATTGGGCTACCTGTGATGACGGTGCTGAGTCAAACCTGTGCTGCCTTAGTGACAGGGCTGCTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR GCA 72 bp AGACACTGCTCCAGAGCACAGTGGCCACACAAACACTaGGACAGAGCTCTTTATTTCCCACGGTCTGCACAG +
Preference number: 3 (lower is better)
Translates to: RHCSRAQWPHKH*DRALYFPRSAQ
Trigger: CTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTTGTGTGGCCACTGTGCTCTGGAGCAGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 72 bp CCCACAGCTCAGAATAGACACTGCTCCAGAGCACAGTaGCCACACAAACACTGCGACAGAGCTCTTTATTTC +
Preference number: 3 (lower is better)
Translates to: PTAQNRHCSRAQ*PHKHCDRALYF
Trigger: GAAATAAAGAGCTCTGTCGCAGTGTTTGTGTGGCCACTGTGCTCTGGAGCAGTGTCTATTCTGAGCTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 72 bp CACCTTCTTTGTTCTCCAGCTCCCATGGTTTCTGAGTaGGAAGAAATGCAGCCATACAGCTCAAAGCCCTCC +
Preference number: 3 (lower is better)
Translates to: HLLCSPAPMVSE*EEMQPYSSKPS
Trigger: GGAGGGCTTTGAGCTGTATGGCTGCATTTCTTCCCACTCAGAAACCATGGGAGCTGGAGAACAAAGAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR TCA 72 bp TCTCCACCTTCTTTGTTCTCCAGCTCCCATGGTTTCTaGGTGGGAAGAAATGCAGCCATACAGCTCAAAGCC +
Preference number: 3 (lower is better)
Translates to: SPPSLFSSSHGF*VGRNAAIQLKA
Trigger: GGCTTTGAGCTGTATGGCTGCATTTCTTCCCACTCAGAAACCATGGGAGCTGGAGAACAAAGAAGGTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR GCA 72 bp GGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAATaGTCATTAAAATGGTGTGTACAGCAGAGCCTCTCT +
Preference number: 3 (lower is better)
Translates to: GEAEKWRPCQKE*SLKWCVQQSLS
Trigger: AGAGAGGCTCTGCTGTACACACCATTTTAATGAGCATTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 72 bp AAGTGGAGGCCTTGCCAGAAAGAATGCTCATTAAAATaGTGTGTACAGCAGAGCCTCTCTGGAACCGAGGCA +
Preference number: 3 (lower is better)
Translates to: KWRPCQKECSLK*CVQQSLSGTEA
Trigger: TGCCTCGGTTCCAGAGAGGCTCTGCTGTACACACCATTTTAATGAGCATTCTTTCTGGCAAGGCCTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 72 bp TGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTaGAGGCCTTGCCAGAAAGAATGCTCATTAAAATGG +
Preference number: 3 (lower is better)
Translates to: CFPSLSAGEAEK*RPCQKECSLKW
Trigger: CCATTTTAATGAGCATTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR GCA 72 bp ACTTCGTGCTTCTCTCAGGTCGAAACAGGAGTGTACTaGCATTTTTCCCACCCACAGAGACATGATCAGAGT +
Preference number: 3 (lower is better)
Translates to: TSCFSQVETGVY*HFSHPQRHDQS
Trigger: ACTCTGATCATGTCTCTGTGGGTGGGAAAAATGGCAGTACACTCCTGTTTCGACCTGAGAGAAGCACGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR GCA 72 bp TCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTaGCAGAAAGAATGCTCATTAAAATGGTGTGTACAG +
Preference number: 3 (lower is better)
Translates to: SLSAGEAEKWRP*QKECSLKWCVQ
Trigger: CTGTACACACCATTTTAATGAGCATTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CAA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGGTTTCTCCACCTTCTTaGTTCTCCAGCTCCCATGGT +
Preference number: 3 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRVSPPS*FSSSHG
Trigger: ACCATGGGAGCTGGAGAACAAAGAAGGTGGAGAAAC...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR TCA 72 bp ATACAGCTCAAAGCCCTCCTTAAGAACCTGCTCTCATaGACGATCTGGGGTACAATGTTGGGTAATCTCCCA +
Preference number: 3 (lower is better)
Translates to: IQLKALLKNLLS*TIWGTMLGNLP
Trigger: TGGGAGATTACCCAACATTGTACCCCAGATCGTTCATGAGAGCAGGTTCTTAAGGAGGGCTTTGAGCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR-3UTR CAA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCCCTTGGAGGTGGCTCTaGACCAGTACTGACACCCCA +
Preference number: 3 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFPWRWL*TSTDTP
Trigger: TGGGGTGTCAGTACTGGTCAAGAGCCACCTCCAAGG...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CCA 72 bp GGTAGAGATAACAATGAGGAACTCTGGCAAGGGCACTaGAAGCTGACCTCCACCAAGAACTTTACTTTTTAT +
Preference number: 3 (lower is better)
Translates to: GRDNNEELWQGH*KLTSTKNFTFY
Trigger: ATAAAAAGTAAAGTTCTTGGTGGAGGTCAGCTTCCAGTGCCCTTGCCAGAGTTCCTCATTGTTATCTCTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR TCA 72 bp ATAACAATGAGGAACTCTGGCAAGGGCACTGGAAGCTaGCCTCCACCAAGAACTTTACTTTTTATTGTATGT +
Preference number: 3 (lower is better)
Translates to: ITMRNSGKGTGS*PPPRTLLFIVC
Trigger: ACATACAATAAAAAGTAAAGTTCTTGGTGGAGGTCAGCTTCCAGTGCCCTTGCCAGAGTTCCTCATTGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR TCA 72 bp AATAGAAGGGTAGCTGAGATCCTTGTGATGATGAAGTaGAAGTCTCTGGTAAGAGTTAAACAAGATGCTGGA +
Preference number: 3 (lower is better)
Translates to: NRRVAEILVMMK*KSLVRVKQDAG
Trigger: TCCAGCATCTTGTTTAACTCTTACCAGAGACTTTCACTTCATCATCACAAGGATCTCAGCTACCCTTCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACGCTTCAGCCCTGCGGTaGGCTTCTGGCCGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDASALR*ASGRPQ
Trigger: TTGGGGCCGGCCAGAAGCTCACCGCAGGGCTGAAGC...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACCAGAGCTTCCAGGACTaGGCCTCCCACAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDQSFQD*ASHSPR
Trigger: CCTGGGACTGTGGGAGGCCCAGTCCTGGAAGCTCTG...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACGGCTGGGTGGGGTGCTaGGTGGTACTGTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDGWVGC*VVLWSI
Trigger: GATGGACCACAGTACCACCCAGCACCCCACCCAGCC...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGGTCTGGGGGCAGGTCTaGGCCCCGGAATCCATTATG +
Preference number: 4 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQVWGQV*APESIM
Trigger: CATAATGGATTCCGGGGCTCAGACCTGCCCCCAGAC...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACTTGCTGGTGGGGAGCTaGCAGCCACAGAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDLLVGS*QPQKET
Trigger: GGTCTCCTTCTGTGGCTGCCAGCTCCCCACCAGCAA...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGGCGGCCTTTTTCACCTaGTGGACCAGGGGCACTGTC +
Preference number: 4 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQAAFFT*WTRGTV
Trigger: GACAGTGCCCCTGGTCCACCAGGTGAAAAAGGCCGC...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGTTCACACTGCCGGCATaGGTACCGCTTCAGCGTCCG +
Preference number: 4 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQFTLPA*VPLQRP
Trigger: CGGACGCTGAAGCGGTACCCATGCCGGCAGTGTGAA...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACAGGGCCGAGGAAAGCTaGGGCTATCCTCGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDRAEES*GYPRCS
Trigger: ACTGCACCGAGGATAGCCCCAGCTTTCCTCGGCCCT...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACGCATGCCTCGGAGTCTaGGGCTTCCACCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDACLGV*GFHLHL
Trigger: GAGGTGAAGGTGGAAGCCCCAGACTCCGAGGCATGC...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGCCTCAATGTGGACACTaGGCCGGCTATAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQPQCGH*AGYSAG
Trigger: GCCAGCACTATAGCCGGCGCAGTGTCCACATTGAGG...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAGAAGCGGCTGGGGTTaGTGGTGCAGTGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQRSGWG*WCSGVH
Trigger: GTGAACTCCACTGCACCAGCAACCCCAGCCGCTTCT...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTGCCTTGCTTCAGCCCTaGGGTGAGCTTCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGALLQP*GELLAG
Trigger: GCCGGCCAGAAGCTCACCGCAGGGCTGAAGCAAGGC...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTCCTCATCCGGGGCCTTaGTTCAGCCCTGCGGTGAGC +
Preference number: 4 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGPHPGP*FSPAVS
Trigger: GCTCACCGCAGGGCTGAAGCAAGGCCCCGGATGAGG...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTGGCAGCAGTACCCACTaGCCGGCACGTGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGGSSTH*PARGFC
Trigger: GCAGAATCCACGTGCCGGCCAGTGGGTACTGCTGCC...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGTGGCATTGTCCAAAGTaGGGCTGGGTTTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQWHCPK*GWVWGR
Trigger: CCTCCCCCAAACCCAGCCCCACTTTGGACAATGCCA...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTACCCTGGGGGCTCCCTaGATGTATGCCTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGTLGAP*MYACLR
Trigger: TCTGAGGCAGGCATACATTCAGGGAGCCCCCAGGGT...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACTCTGACTTTGGGAATTaGTGGTGGGGAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDSDFGN*WWGAGS
Trigger: GCTGCCAGCTCCCCACCAGCAATTCCCAAAGTCAGA...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACAAGGACTGTTCACACTaGCGGCATGGGTACCGCTTC +
Preference number: 4 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDKDCSH*RHGYRF
Trigger: GAAGCGGTACCCATGCCGGCAGTGTGAACAGTCCTT...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGCCCTGGTGCCTCACTTaGAGCCTCAGTGATTGTGCT +
Preference number: 4 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQPWCLT*SLSDCA
Trigger: AGCACAATCACTGAGGCTCCAAGTGAGGCACCAGGG...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCCCACTGGCCGGCACGTaGATTCTGCTGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAPLAGT*ILLSAG
Trigger: ACCTGCAGACAGCAGAATCCACGTGCCGGCCAGTGG...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACTCTGGTCCGCAGAGATaGGCTTCACAAGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDSGPQR*ASQAAE
Trigger: CTCAGCTGCTTGTGAAGCCCATCTCTGCGGACCAGA...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTAGCGGCTGGGGTTGCTaGTGCAGTGGAGTTCACGGG +
Preference number: 4 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGSGWGC*CSGVHG
Trigger: CCCGTGAACTCCACTGCACCAGCAACCCCAGCCGCT...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACGAGCCTCACTGGGTCTaGATAAAGTGGCAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDEPHWV*IKWQGW
Trigger: CCAGCCTTGCCACTTTATCCAGACCCAGTGAGGCTC...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCGGCTACATTTGTAGCTaGGGGCTCGGCAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAGYICS*GLGRSS
Trigger: CGAGCTCCTGCCGAGCCCCCAGCTACAAATGTAGCC...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp TTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAACACTTGGAGCCTCAGTaGTTGTGCTCCCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FPSLSAGEAEKWRPCQKEHLEPQ*LCSLQG
Trigger: CCCCTGCAGGGAGCACAATCACTGAGGCTCCAAGTG...TTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTGCCTTCATCCCCTGGTaGCTCACTTGGAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGAFIPW*LTWSLS
Trigger: ACTGAGGCTCCAAGTGAGGCACCAGGGGATGAAGGC...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGCCTGCCTCAGAAAAGTaGTCTTCCACAGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQPASEK*SSTGMA
Trigger: AGCCATGCCTGTGGAAGAGCACTTTTCTGAGGCAGG...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTAGGTGGGCTGAGATTTaGCGCATAGAGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGRWAEI*RIEGHR
Trigger: CCTGTGCCCCTCTATGCGCCAAATCTCAGCCCACCT...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTAGTCCCTTGCTCTTGTaGTCACGGGCATGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGSPLLL*SRACRS
Trigger: GCTTCGGCATGCCCGTGACCACAAGAGCAAGGGACT...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCGGGGACTTGTGTGCATaGATCCGCTGGTGTGCACAG +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAGDLCA*IRWCAQ
Trigger: CTGTGCACACCAGCGGATCCATGCACACAAGTCCCC...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACGTGTCTGTTGAAGACTaGAGGCTTGACAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDVSVED*RLDSSS
Trigger: GGAGGAGCTGTCAAGCCTCCAGTCTTCAACAGACAC...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CAA 72 bp AACCTAGAGCTCCCGTGGGCAGCAGGAAATGCTGTTTaGCTTCAGATGGGGCAGTCAGGGCTGTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: NLELPWAAGNAV*LQMGQSGLSGK
Trigger: CTTCCCAGACAGCCCTGACTGCCCCATCTGAAGCAAAACAGCATTTCCTGCTGCCCACGGGAGCTCTAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCCGGGACTGGGAATTTTaGCAGAGCTTCCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRARDWEF*QSFQDW
Trigger: CCAGTCCTGGAAGCTCTGTCAAAATTCCCAGTCCCG...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACCTTCTTGCTTGCCTGTaGGTTCAGGGCAGATCCTTT +
Preference number: 4 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDLLACL*VQGRSF
Trigger: AAAGGATCTGCCCTGAACTCACAGGCAAGCAAGAAG...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp TTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAAGTCATTTGCGTGACCTaGGGCTGGCTCCGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: FPSLSAGEAEKWRPCQKEVICVT*GWLRLC
Trigger: ACAGAGACGGAGCCAGCCTCAGGTCACGCAAATGAC...TTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACACAGGGTTAGAGCTGTaGAGGACCTTGTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDTGLEL*RTLLKT
Trigger: GGTCTTCAACAAGGTCCTTCACAGCTCTAACCCTGT...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTGGCACTCAGGGCACTTaGAAACACCCGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGGTQGT*KHPPVS
Trigger: AGACACAGGCGGGTGTTTTCAAGTGCCCTGAGTGCC...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGCGTCTGCCATTCTGCTaGCAGGTCTTTTCAGATGGT +
Preference number: 4 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQRLPFC*QVFSDG
Trigger: ACCATCTGAAAAGACCTGTCAGCAGAATGGCAGACG...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGGTGCACTTTGCACACTaGAACAGGGACTTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQVHFAH*NRDLCL
Trigger: AAGGCACAAGTCCCTGTTTCAGTGTGCAAAGTGCAC...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTCCCTGCTCATGCTCCTaGTGGCTCTCTAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGPCSCS*WLSKGK
Trigger: CTTGCCTTTAGAGAGCCAGCAGGAGCATGAGCAGGG...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGATGCCTGAGGTGCTGTaGTCTGTTGCTTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQMPEVL*SVASCL
Trigger: CAAGCAAGAAGCAACAGAGCACAGCACCTCAGGCAT...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp TTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAAAACTTCCCACAGTGGTaGGAGTCTGGGGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FPSLSAGEAEKWRPCQKENFPQW*ESGGRS
Trigger: AGACCTGCCCCCAGACTCCCACCACTGTGGGAAGTT...TTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACCTCTGGGCTAGAGATTaGGCTGAACTGGTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDLWARD*AELVEG
Trigger: ACCTTCAACCAGTTCAGCCCAATCTCTAGCCCAGAG...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTTGTGCCTTCATCCCCTaGTGCCTCACTTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGCAFIP*CLTWSL
Trigger: GAGGCTCCAAGTGAGGCACCAGGGGATGAAGGCACA...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTGCCGCCACAAACATCTaGTCCGCAGAGATGGGCTTC +
Preference number: 4 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGAATNI*SAEMGF
Trigger: GAAGCCCATCTCTGCGGACCAGATGTTTGTGGCGGC...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCGGCTTCACAAGCAGCTaGGAGCACTGCATGACAAGT +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAGFTSS*EHCMTS
Trigger: ACTTGTCATGCAGTGCTCTCAGCTGCTTGTGAAGCC...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCCCAAAGTCAGGTGGATaGCACCACAGTGAATGCACC +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAPKSGG*HHSECT
Trigger: GGTGCATTCACTGTGGTGTCATCCACCTGACTTTGG...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp TTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAAAGAGCCAGACCTTGCTaGCCTCCTAGGTCAGTAACC +
Preference number: 4 (lower is better)
Translates to: FPSLSAGEAEKWRPCQKERARPC*PPRSVT
Trigger: GGTTACTGACCTAGGAGGTCAGCAAGGTCTGGCTCT...TTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGTCTCATCGATACACATaGCTGAAGACTTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQSHRYT*LKTSGD
Trigger: GTCCCCTGAAGTCTTCAGGCATGTGTATCGATGAGA...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCGGGGCTGATCCTGAGTaGGACAAGGACACATTCTCA +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAGADPE*DKDTFS
Trigger: TGAGAATGTGTCCTTGTCGCACTCAGGATCAGCCCC...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCTGCTGTCACTGCAGATaGTCCGAGGGCTATCAGATG +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRACCHCR*SEGYQM
Trigger: CATCTGATAGCCCTCGGAGCATCTGCAGTGACAGCA...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTACTCAGCAGGGGACTTaGTTGGATCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGTQQGT*LDHQGL
Trigger: CAGACCCTGATGATCCAAGCAAGTCCCCTGCTGAGT...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp TTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAATCTCATTCTCCTCACTaGGAGCCTGGATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FPSLSAGEAEKWRPCQKESHSPH*EPGWPP
Trigger: AGGAGGCCATCCAGGCTCCCAGTGAGGAGAATGAGA...TTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTAGGATCCTCAGGCTCTaGGCTAGAGATTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGRILRL*ARDWAE
Trigger: TTCAGCCCAATCTCTAGCCCAGAGCCTGAGGATCCT...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp TTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAACATTGGCCACCCTTTTaGCCTGTAAGGCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: FPSLSAGEAEKWRPCQKEHWPPF*PVRPPR
Trigger: CCTTGGTGGCCTTACAGGCCAAAAGGGTGGCCAATG...TTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTTTTGGGAATTGCTGGTaGGGAGCTGGCAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGFGNCW*GAGSHR
Trigger: TCTGTGGCTGCCAGCTCCCCACCAGCAATTCCCAAA...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCCCTTTTCTGTCACCCTaGGGGCTCCCTGAATGTATG +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAPFLSP*GLPECM
Trigger: CATACATTCAGGGAGCCCCCAGGGTGACAGAAAAGG...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTTCTGCTGTCTGCAGGTaGGCTGAGATTTGGCGCATA +
Preference number: 4 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGSAVCR*AEIWRI
Trigger: TATGCGCCAAATCTCAGCCCACCTGCAGACAGCAGA...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCCATTTGTGGAAGACCTaGCAGTGTCGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAHLWKT*QCRSWM
Trigger: CATCCAGGAGCGACACTGCCAGGTCTTCCACAAATG...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CAA 72 bp CTGGAGGATCTGACATTAAGGGGCACCCTGCCTTTTTaGGGAACTAGAAGGGTGGGCTTTGGATGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LEDLTLRGTLPF*GTRRVGFGWLH
Trigger: GTGGAGCCATCCAAAGCCCACCCTTCTAGTTCCCAAAAAAGGCAGGGTGCCCCTTAATGTCAGATCCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCATCGATACACATGCCTaGAGACTTCAGGGGACTCTC +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAIDTHA*RLQGTL
Trigger: GAGAGTCCCCTGAAGTCTTCAGGCATGTGTATCGAT...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTAGCATCTGGCATACCTaGCAAGTTAGCCCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGSIWHT*QVSPSV
Trigger: AACCGAGGGGCTAACTTGTCAGGTATGCCAGATGCT...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGTGTGCCTCTTCTTATTaGAGACCATTTCACAGGAGC +
Preference number: 4 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQCASSY*RPFHRS
Trigger: GCTCCTGTGAAATGGTCTTCAATAAGAAGAGGCACA...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTAGGCTGCTAGGGTTGTaGAAGGACTGTTCACACTGC +
Preference number: 4 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGRLLGL*KDCSHC
Trigger: GCAGTGTGAACAGTCCTTTCACAACCCTAGCAGCCT...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCCTGGATGGCCTCCTTTaGATCAAGACTTGTGGGATC +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRALDGLL*IKTCGI
Trigger: GATCCCACAAGTCTTGATGCAAAGGAGGCCATCCAG...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTGGCTCCCTGAATGTATaGCTGCCTCAGAAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGGSLNV*LPQKSA
Trigger: AGCACTTTTCTGAGGCAGGCATACATTCAGGGAGCC...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp TTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAAGGTGCTGTGCTCTGTTaGTTCTTGCTTGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: FPSLSAGEAEKWRPCQKEGAVLC*FLLACE
Trigger: CTCACAGGCAAGCAAGAAGCAACAGAGCACAGCACC...TTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTGTGGATTCTGCTGTCTaGAGGTGGGCTGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGVDSAV*RWAEIW
Trigger: CCAAATCTCAGCCCACCTGCAGACAGCAGAATCCAC...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGATTAACTCTGGTTTCTaGAGAAACAGCAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQINSGF*RNSSGH
Trigger: GTGCCCACTGCTGTTTCTGCAGAAACCAGAGTTAAT...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTCTGTGTCATGGTTGTTaGGAATGTGTTTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGLCHGC*ECVCAG
Trigger: GCCTGCGCAAACACATTCGCAACAACCATGACACAG...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCAGTCCCAGGAGGAGGTaGGAAATAACTGTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRASPRRR*EITVRV
Trigger: CACTCTGACAGTTATTTCCCACCTCCTCCTGGGACT...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCCTGGAGCAAGCTTCTTaGGCTCTCCAATACTGTTGC +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRALEQAS*ALQYCC
Trigger: GCAACAGTATTGGAGAGCCCAAGAAGCTTGCTCCAG...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTTGGATCATCAGGGTCTaGCAGGATCCTGGTAACCGT +
Preference number: 4 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGWIIRV*QDPGNR
Trigger: ACGGTTACCAGGATCCTGCCAGACCCTGATGATCCA...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCGGACCAAGTTCAAGTTaGCCAAGTGCACAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAGPSSS*PSAQLW
Trigger: CCAAAGCTGTGCACTTGGCCAACTTGAACTTGGTCC...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCTGTCGCTCCTGGATGTaGCTTTTCAGCAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRACRSWM*LFSKAK
Trigger: TTTGGCCTTGCTGAAAAGCCACATCCAGGAGCGACA...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCCAGAATGCACATTTGTaGAAGACCTGGCAGTGTCGC +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAQNAHL*KTWQCR
Trigger: GCGACACTGCCAGGTCTTCCACAAATGTGCATTCTG...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTTGCTCTGTTGCTTCTTaGTTGCCTGTGAGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGCSVAS*LPVSSG
Trigger: CCCTGAACTCACAGGCAAGCAAGAAGCAACAGAGCA...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGGGGTGGGGTGCTGGGTaGTACTGTGGTCCATCGTAC +
Preference number: 4 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRGWGAG*YCGPSY
Trigger: GTACGATGGACCACAGTACCACCCAGCACCCCACCC...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp TTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAATGGTCTCTCACTTTGTaGACTATGAACAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: FPSLSAGEAEKWRPCQKEWSLTL*TMNRWR
Trigger: CCGCCACCTGTTCATAGTCCACAAAGTGAGAGACCA...TTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACAAGAGTCACTGGTTTTaGTCATATTCTCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDKSHWF*SYSHPL
Trigger: AAGGGGATGAGAATATGATCAAAACCAGTGACTCTT...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAAACTGGCAGCGGGGGTTaGTGCCTGAGGTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQTGSGG*CLRCCA
Trigger: AGCACAGCACCTCAGGCATCAACCCCCGCTGCCAGT...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGCTTGGCAGTCACAGATaGGGCAACACTGTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRLGSHR*GNTVGD
Trigger: GTCCCCCACAGTGTTGCCGCATCTGTGACTGCCAAG...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTGGGTTTCTGATACCGTaGATAAGGCTAATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGGFLIP*IRLMWL
Trigger: GAGCCACATTAGCCTTATGCACGGTATCAGAAACCC...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCTTGCATCAAGACTTGTaGGATCTGGGATGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRALHQDL*DLGCQR
Trigger: CCTTTGACATCCCAGATCCCACAAGTCTTGATGCAA...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGGACTTTGGGAATTGCTaGTGGGGAGCTGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRDFGNC*WGAGSH
Trigger: GTGGCTGCCAGCTCCCCACCAGCAATTCCCAAAGTC...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAAGCACTGTCATTTGCGTaGCCTGAGGCTGGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQALSFA*PEAGSV
Trigger: GACGGAGCCAGCCTCAGGTCACGCAAATGACAGTGC...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp TTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAATGTGAAGGACCTTGTTaGAGACCTCCACAATTAGAG +
Preference number: 4 (lower is better)
Translates to: FPSLSAGEAEKWRPCQKECEGPC*RPPQLE
Trigger: CTCTAATTGTGGAGGTCTTCAACAAGGTCCTTCACA...TTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp TTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAACCGCCTGTGTCTTGCTaGCATTCTGGTAAAAATGTT +
Preference number: 4 (lower is better)
Translates to: FPSLSAGEAEKWRPCQKEPPVSC*HSGKNV
Trigger: AACATTTTTACCAGAATGTCAGCAAGACACAGGCGG...TTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAAACCTTCTGCCCACCCTaGTCATGCTCCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQTFCPP*SCSCWL
Trigger: GAGCCAGCAGGAGCATGAGCAGGGTGGGCAGAAGGT...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGTCCTCACTGGGAGCCTaGATGGCCTCCTTTGCATCA +
Preference number: 4 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRSSLGA*MASFAS
Trigger: TGATGCAAAGGAGGCCATCCAGGCTCCCAGTGAGGA...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTAGACTGGGAGCAATGTaGTCTTTCTCTGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGRLGAM*SFSASN
Trigger: GTTTGAAGCAGAGAAAGACCACATTGCTCCCAGTCT...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCAACTGTCAGAGTGCTTaGACTTTATCCCAAACCCAT +
Preference number: 4 (lower is better)
Translates to: SLRWSREGLAHQKRNTRANCQSA*TLSQTH
Trigger: ATGGGTTTGGGATAAAGTCCAAGCACTCTGACAGTT...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTATAAAGTGGCAAGGCTaGAATTACAGAGCTGGCATT +
Preference number: 4 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGIKWQG*NYRAGI
Trigger: AATGCCAGCTCTGTAATTCCAGCCTTGCCACTTTAT...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGTGCATAAGGCTAATGTaGCTCTCCAGGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRCIRLM*LSRREG
Trigger: GCCCTCCCTCCTGGAGAGCCACATTAGCCTTATGCA...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGCTCTTTAGTGGGCCCTaGGGAATCCTTTGTGTGACC +
Preference number: 4 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRLFSGP*GILCVT
Trigger: GGTCACACAAAGGATTCCTCAGGGCCCACTAAAGAG...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAATGTCTGCAGGTGGGCTaGGATTTGGCGCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQCLQVG*DLAHRG
Trigger: CCCTCTATGCGCCAAATCTCAGCCCACCTGCAGACA...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGGCTGAGAGCACTGCATaGCAAGTCCCTTGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRAESTA*QVPCSC
Trigger: ACAAGAGCAAGGGACTTGTCATGCAGTGCTCTCAGC...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAATCAAACTTCCCACAGTaGTGGGAGTCTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQSNFPQ*WESGGR
Trigger: CCTGCCCCCAGACTCCCACCACTGTGGGAAGTTTGA...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp TTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAACCGAGGGCTATCAGATaGCTTGATACTTTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: FPSLSAGEAEKWRPCQKEPRAIR*LDTFSS
Trigger: ACTAGAAAAAGTATCAAGCCATCTGATAGCCCTCGG...TTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAAATCCTTTTGGGACCCTaGACCCAGAGATGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQILLGP*TQRCGR
Trigger: CCTGCCGCATCTCTGGGTCCAGGGTCCCAAAAGGAT...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGGCCTTTTTCACCTGGTaGACCAGGGGCACTGTCATT +
Preference number: 4 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRAFFTW*TRGTVI
Trigger: AATGACAGTGCCCCTGGTCCACCAGGTGAAAAAGGC...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGCCGGATGAGCCTCACTaGGTCTGGATAAAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRPDEPH*VWIKWQ
Trigger: TTGCCACTTTATCCAGACCCAGTGAGGCTCATCCGG...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAATTGTGGTCACGGGCATaGCGAAGCAGACTGCACTTG +
Preference number: 4 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQLWSRA*RSRLHL
Trigger: CAAGTGCAGTCTGCTTCGGCATGCCCGTGACCACAA...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGGCTTCAAACGACTCTTaGCGGCTGGTGTTCTTGACA +
Preference number: 4 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRASNDS*RLVFLT
Trigger: TGTCAAGAACACCAGCCGCCAAGAGTCGTTTGAAGC...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAATGTCCAAAGTGGGGCTaGGTTTGGGGGAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQCPKWG*VWGRKK
Trigger: CTTCTTCCTCCCCCAAACCCAGCCCCACTTTGGACA...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCGGCTCCACCACCTTCTaGCCACCCTGCTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFGSTTF*PPCSCS
Trigger: GGAGCATGAGCAGGGTGGGCAGAAGGTGGTGGAGCC...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAAATGGATCCGCTGGTGTaGACAGAAGCTGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQMDPLV*TEAALV
Trigger: AACCAGTGCAGCTTCTGTGCACACCAGCGGATCCAT...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGAGTCTGTGGCGAAGGTaGACTTTGCACACTGAAACA +
Preference number: 4 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRSLWRR*TLHTET
Trigger: TGTTTCAGTGTGCAAAGTGCACCTTCGCCACAGACT...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
3UTR CAA 72 bp TTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTaGCCAGAAAGAATGCTCATTAAAATGGTGTGTACA +
Preference number: 4 (lower is better)
Translates to: FTVSWGSREVEA*PERMLIKMVCT
Trigger: TGTACACACCATTTTAATGAGCATTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAACTGGAATTACAGAGCTaGCATTGTCCAAAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQLELQS*HCPKWG
Trigger: GCCCCACTTTGGACAATGCCAGCTCTGTAATTCCAG...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGTGGGTCTGGATAAAGTaGCAAGGCTGGAATTACAGA +
Preference number: 4 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRWVWIK*QGWNYR
Trigger: TCTGTAATTCCAGCCTTGCCACTTTATCCAGACCCA...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCGGTGTGCACAGAAGCTaGACTGGTTGGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFGVHRS*TGWAAA
Trigger: TGCTGCTGCCCAACCAGTGCAGCTTCTGTGCACACC...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCGTAGGGGGACTTGTGTaGATGGATCCGCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFVGGLV*MDPLVC
Trigger: GCACACCAGCGGATCCATGCACACAAGTCCCCCTAC...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGCATTATGTAGGAGACTaGGAGCAATGTGGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRHYVGD*EQCGLS
Trigger: AGAAAGACCACATTGCTCCCAGTCTCCTACATAATG...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCGAGACCCTTTGCTGCTaGTGTCACTGCAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFETLCC*CHCRCS
Trigger: GGAGCATCTGCAGTGACAGCAGCAGCAAAGGGTCTC...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGTGGGTATTCTTGACATaGTGCATTAACTCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRWVFLT*CINSGF
Trigger: GAAACCAGAGTTAATGCAGCATGTCAAGAATACCCA...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCCAGAAGGAGACCCTTTaGTGCTGCTGTCACTGCAGA +
Preference number: 4 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFQKETL*CCCHCR
Trigger: TCTGCAGTGACAGCAGCAGCAAAGGGTCTCCTTCTG...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCTGGCAGTGTCGCTCCTaGATGTGGCTTTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFWQCRS*MWLFSK
Trigger: CTTGCTGAAAAGCCACATCCAGGAGCGACACTGCCA...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR GCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCAATGTGGTCTTTCTCTaGTTCAAACGACTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFNVVFL*FKRLLA
Trigger: CGCCAAGAGTCGTTTGAAGCAGAGAAAGACCACATT...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR TCA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCATACTGTTGCTAGGGTaGCTATTGAACTCTAAAGCT +
Preference number: 4 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFILLLG*LLNSKA
Trigger: AGCTTTAGAGTTCAATAGTCACCCTAGCAACAGTAT...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp AGTGCTCCTCATCCGGGGCCTTGCTTCAGCCCTGCGGTGAGCTTCTaGCCGGCCCCAACGGCCAGCAGTCAGGGAGCTGCCTCTAGCGGC +
Preference number: 5 (lower is better)
Translates to: SAPHPGPCFSPAVSF*PAPTASSQGAASSG
Trigger: GCCGCTAGAGGCAGCTCCCTGACTGCTGGCCGTTGGGGCCGGCCAGAAGCTCACCGCAGGGCTGAAGCAAGGCCCCGGATGAGGAGCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 90 bp GTCCAACCAGTGCTCCTCATCCGGGGCCTTGCTTCAGCCCTGCGGTaGGCTTCTGGCCGGCCCCAACGGCCAGCAGTCAGGGAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: VQPVLLIRGLASALR*ASGRPQRPAVRELP
Trigger: AGGCAGCTCCCTGACTGCTGGCCGTTGGGGCCGGCCAGAAGCTCACCGCAGGGCTGAAGCAAGGCCCCGGATGAGGAGCACTGGTTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 90 bp GACAGGTCCAACCAGTGCTCCTCATCCGGGGCCTTGCTTCAGCCCTaGGGTGAGCTTCTGGCCGGCCCCAACGGCCAGCAGTCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: DRSNQCSSSGALLQP*GELLAGPNGQQSGS
Trigger: GCTCCCTGACTGCTGGCCGTTGGGGCCGGCCAGAAGCTCACCGCAGGGCTGAAGCAAGGCCCCGGATGAGGAGCACTGGTTGGACCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 90 bp TTGGCACTCCTGACAGGTCCAACCAGTGCTCCTCATCCGGGGCCTTaGTTCAGCCCTGCGGTGAGCTTCTGGCCGGCCCCAACGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LALLTGPTSAPHPGP*FSPAVSFWPAPTAS
Trigger: GCTGGCCGTTGGGGCCGGCCAGAAGCTCACCGCAGGGCTGAAGCAAGGCCCCGGATGAGGAGCACTGGTTGGACCTGTCAGGAGTGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp GGCTGGGTTTGGGGGAGGAAGAAGCGGCTGGGGTTGCTGGTGCAGTaGAGTTCACGGGAGCCGCCACAAACATCTGGTCCGCAGAGATGG +
Preference number: 5 (lower is better)
Translates to: GWVWGRKKRLGLLVQ*SSREPPQTSGPQRW
Trigger: CCATCTCTGCGGACCAGATGTTTGTGGCGGCTCCCGTGAACTCCACTGCACCAGCAACCCCAGCCGCTTCTTCCTCCCCCAAACCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp ACGGCCAGCAGTCAGGGAGCTGCCTCTAGCGGCTACATTTGTAGCTaGGGGCTCGGCAGGAGCTCGAGAGCCAGGGCGGTTAGAAGATGT +
Preference number: 5 (lower is better)
Translates to: TASSQGAASSGYICS*GLGRSSRARAVRRC
Trigger: ACATCTTCTAACCGCCCTGGCTCTCGAGCTCCTGCCGAGCCCCCAGCTACAAATGTAGCCGCTAGAGGCAGCTCCCTGACTGCTGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 90 bp CTCCAGGCAGCAGTACCCACTGGCCGGCACGTGGATTCTGCTGTCTaGAGGTGGGCTGAGATTTGGCGCATAGAGGGGCACAGGGTTAGA +
Preference number: 5 (lower is better)
Translates to: LQAAVPTGRHVDSAV*RWAEIWRIEGHRVR
Trigger: TCTAACCCTGTGCCCCTCTATGCGCCAAATCTCAGCCCACCTGCAGACAGCAGAATCCACGTGCCGGCCAGTGGGTACTGCTGCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 90 bp CTCGATCAGGAACCCACTCTTGGCACTCCTGACAGGTCCAACCAGTaGTCCTCATCCGGGGCCTTGCTTCAGCCCTGCGGTGAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: LDQEPTLGTPDRSNQ*SSSGALLQPCGELL
Trigger: CAGAAGCTCACCGCAGGGCTGAAGCAAGGCCCCGGATGAGGAGCACTGGTTGGACCTGTCAGGAGTGCCAAGAGTGGGTTCCTGATCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp GCAGCAGTACCCACTGGCCGGCACGTGGATTCTGCTGTCTGCAGGTaGGCTGAGATTTGGCGCATAGAGGGGCACAGGGTTAGAGCTGTG +
Preference number: 5 (lower is better)
Translates to: AAVPTGRHVDSAVCR*AEIWRIEGHRVRAV
Trigger: CACAGCTCTAACCCTGTGCCCCTCTATGCGCCAAATCTCAGCCCACCTGCAGACAGCAGAATCCACGTGCCGGCCAGTGGGTACTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp GGCATTGTCCAAAGTGGGGCTGGGTTTGGGGGAGGAAGAAGCGGCTaGGGTTGCTGGTGCAGTGGAGTTCACGGGAGCCGCCACAAACAT +
Preference number: 5 (lower is better)
Translates to: GIVQSGAGFGGGRSG*GCWCSGVHGSRHKH
Trigger: ATGTTTGTGGCGGCTCCCGTGAACTCCACTGCACCAGCAACCCCAGCCGCTTCTTCCTCCCCCAAACCCAGCCCCACTTTGGACAATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 90 bp TGGGAATTGCTGGTGGGGAGCTGGCAGCCACAGAAGGAGACCCTTTaGTGCTGCTGTCACTGCAGATGCTCCGAGGGCTATCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: WELLVGSWQPQKETL*CCCHCRCSEGYQMA
Trigger: AGCCATCTGATAGCCCTCGGAGCATCTGCAGTGACAGCAGCAGCAAAGGGTCTCCTTCTGTGGCTGCCAGCTCCCCACCAGCAATTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGACAAGTCCCTTGCTCTaGTGGTCACGGGCATGCCGA +
Preference number: 5 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQTSPLL*WSRACR
Trigger: TCGGCATGCCCGTGACCACAAGAGCAAGGGACTTGT...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp ACTGGCCGGCACGTGGATTCTGCTGTCTGCAGGTGGGCTGAGATTTaGCGCATAGAGGGGCACAGGGTTAGAGCTGTGAAGGACCTTGTT +
Preference number: 5 (lower is better)
Translates to: TGRHVDSAVCRWAEI*RIEGHRVRAVKDLV
Trigger: AACAAGGTCCTTCACAGCTCTAACCCTGTGCCCCTCTATGCGCCAAATCTCAGCCCACCTGCAGACAGCAGAATCCACGTGCCGGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp GGAGCTCGAGAGCCAGGGCGGTTAGAAGATGTGTCTGTTGAAGACTaGAGGCTTGACAGCTCCTCCACGTTCCGGGGAACACCATGGGTA +
Preference number: 5 (lower is better)
Translates to: GAREPGRLEDVSVED*RLDSSSTFRGTPWV
Trigger: TACCCATGGTGTTCCCCGGAACGTGGAGGAGCTGTCAAGCCTCCAGTCTTCAACAGACACATCTTCTAACCGCCCTGGCTCTCGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACCCGGGACTGGGAATTTaGACAGAGCTTCCAGGACTG +
Preference number: 5 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDPGLGI*TELPGL
Trigger: CAGTCCTGGAAGCTCTGTCAAAATTCCCAGTCCCGG...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGACATTGGCCACCCTTTaGGCCTGTAAGGCCACCAAG +
Preference number: 5 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQTLATL*ACKATK
Trigger: CTTGGTGGCCTTACAGGCCAAAAGGGTGGCCAATGT...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACATCAGGAACCCACTCTaGGCACTCCTGACAGGTCCA +
Preference number: 5 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDIRNPL*ALLTGP
Trigger: TGGACCTGTCAGGAGTGCCAAGAGTGGGTTCCTGAT...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 90 bp AAGTGCACAGCTTTGGGCAAGAGACTGGCAGCGGGGGTTGATGCCTaGGGTGCTGTGCTCTGTTGCTTCTTGCTTGCCTGTGAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: KCTALGKRLAAGVDA*GAVLCCFLLACEFR
Trigger: CCTGAACTCACAGGCAAGCAAGAAGCAACAGAGCACAGCACCTCAGGCATCAACCCCCGCTGCCAGTCTCTTGCCCAAAGCTGTGCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 90 bp CTTTGGGCAAGAGACTGGCAGCGGGGGTTGATGCCTGAGGTGCTGTaGTCTGTTGCTTCTTGCTTGCCTGTGAGTTCAGGGCAGATCCTT +
Preference number: 5 (lower is better)
Translates to: LWARDWQRGLMPEVL*SVASCLPVSSGQIL
Trigger: AAGGATCTGCCCTGAACTCACAGGCAAGCAAGAAGCAACAGAGCACAGCACCTCAGGCATCAACCCCCGCTGCCAGTCTCTTGCCCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp GCCTGTAAGGCCACCAAGGCTGCAACACAAGAGGATAACTTGGAATaGGCTGGCTTCAGACGCTGCCTAGGAGGGACAGAGGAGCAAGCA +
Preference number: 5 (lower is better)
Translates to: ACKATKAATQEDNLE*AGFRRCLGGTEEQA
Trigger: TGCTTGCTCCTCTGTCCCTCCTAGGCAGCGTCTGAAGCCAGCCCATTCCAAGTTATCCTCTTGTGTTGCAGCCTTGGTGGCCTTACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp GGACCAAGTTCAAGTTGGCCAAGTGCACAGCTTTGGGCAAGAGACTaGCAGCGGGGGTTGATGCCTGAGGTGCTGTGCTCTGTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: GPSSSWPSAQLWARD*QRGLMPEVLCSVAS
Trigger: AGAAGCAACAGAGCACAGCACCTCAGGCATCAACCCCCGCTGCCAGTCTCTTGCCCAAAGCTGTGCACTTGGCCAACTTGAACTTGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp CGTCTCTGTGCTGAGGACTTGGCAGTCACAGATGCGGCAACACTGTaGGGGACCAAGTTCAAGTTGGCCAAGTGCACAGCTTTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: RLCAEDLAVTDAATL*GTKFKLAKCTALGK
Trigger: CTTGCCCAAAGCTGTGCACTTGGCCAACTTGAACTTGGTCCCCCACAGTGTTGCCGCATCTGTGACTGCCAAGTCCTCAGCACAGAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp GATAAAGTGGCAAGGCTGGAATTACAGAGCTGGCATTGTCCAAAGTaGGGCTGGGTTTGGGGGAGGAAGAAGCGGCTGGGGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: DKVARLELQSWHCPK*GWVWGRKKRLGLLV
Trigger: CACCAGCAACCCCAGCCGCTTCTTCCTCCCCCAAACCCAGCCCCACTTTGGACAATGCCAGCTCTGTAATTCCAGCCTTGCCACTTTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACCCTGGATGGCCTCCTTaGCATCAAGACTTGTGGGAT +
Preference number: 5 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDPGWPP*HQDLWD
Trigger: ATCCCACAAGTCTTGATGCAAAGGAGGCCATCCAGG...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGTCCTCTTTGGTGACATaGGCCACCCTTTTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQSSLVT*ATLLAC
Trigger: ACAGGCCAAAAGGGTGGCCAATGTCACCAAAGAGGA...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTAAGAAGCGGCTGGGGTaGCTGGTGCAGTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGKKRLG*LVQWSS
Trigger: TGAACTCCACTGCACCAGCAACCCCAGCCGCTTCTT...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp TTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAAAAAGTGGGGCTGGGTTaGGGGGAGGAAGAAGCGGCT +
Preference number: 5 (lower is better)
Translates to: FPSLSAGEAEKWRPCQKEKVGLG*GEEEAA
Trigger: AGCCGCTTCTTCCTCCCCCAAACCCAGCCCCACTTT...TTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTGGGCACTCAGGGCACTaGAAAACACCCGCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGGHSGH*KTPACV
Trigger: GACACAGGCGGGTGTTTTCAAGTGCCCTGAGTGCCC...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 90 bp TGGGCCCTGAGGAATCCTTTGTGTGACCAGGCTGATCCTCTTTGGTaGCATTGGCCACCCTTTTGGCCTGTAAGGCCACCAAGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: WALRNPLCDQADPLW*HWPPFWPVRPPRLQ
Trigger: TTGCAGCCTTGGTGGCCTTACAGGCCAAAAGGGTGGCCAATGTCACCAAAGAGGATCAGCCTGGTCACACAAAGGATTCCTCAGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 90 bp GTGTCATGGTTGTTGCGAATGTGTTTGCGCAGGCTGCTAGGGTTGTaGAAGGACTGTTCACACTGCCGGCATGGGTACCGCTTCAGCGTC +
Preference number: 5 (lower is better)
Translates to: VSWLLRMCLRRLLGL*KDCSHCRHGYRFSV
Trigger: GACGCTGAAGCGGTACCCATGCCGGCAGTGTGAACAGTCCTTTCACAACCCTAGCAGCCTGCGCAAACACATTCGCAACAACCATGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 90 bp GCTGCAACACAAGAGGATAACTTGGAATGGGCTGGCTTCAGACGCTaGCTAGGAGGGACAGAGGAGCAAGCACTAAGCTCTGGAGCAAGC +
Preference number: 5 (lower is better)
Translates to: AATQEDNLEWAGFRR*LGGTEEQALSSGAS
Trigger: GCTTGCTCCAGAGCTTAGTGCTTGCTCCTCTGTCCCTCCTAGGCAGCGTCTGAAGCCAGCCCATTCCAAGTTATCCTCTTGTGTTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp AGTCTGGGGGCAGGTCTGAGCCCCGGAATCCATTATGTAGGAGACTaGGAGCAATGTGGTCTTTCTCTGCTTCAAACGACTCTTGGCGGC +
Preference number: 5 (lower is better)
Translates to: SLGAGLSPGIHYVGD*EQCGLSLLQTTLGG
Trigger: GCCGCCAAGAGTCGTTTGAAGCAGAGAAAGACCACATTGCTCCCAGTCTCCTACATAATGGATTCCGGGGCTCAGACCTGCCCCCAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCTGGCGGCTGGTGTTCTaGACAATGACACTCACGGCT +
Preference number: 5 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAWRLVF*TMTLTA
Trigger: AGCCGTGAGTGTCATTGTCAAGAACACCAGCCGCCA...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACTCTGGAGCAAGCTTCTaGGGCTCTCCAATACTGTTG +
Preference number: 5 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDSGASF*GSPILL
Trigger: CAACAGTATTGGAGAGCCCAAGAAGCTTGCTCCAGA...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCGCCCTGAGGAATCCTTaGTGTGACCAGGCTGATCCT +
Preference number: 5 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAALRNP*CDQADP
Trigger: AGGATCAGCCTGGTCACACAAAGGATTCCTCAGGGC...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCGGACTCTTTGGTGACTaGGGCATTTTGGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAGLFGD*GILGLP
Trigger: AGGCAGCCCCAAAATGCCCAAGTCACCAAAGAGTCC...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp TTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAAGGCTCCGGGGACTCTTaGGTGACTTGGGCATTTTGG +
Preference number: 5 (lower is better)
Translates to: FPSLSAGEAEKWRPCQKEGSGDS*VTWAFW
Trigger: CCAAAATGCCCAAGTCACCAAAGAGTCCCCGGAGCC...TTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCTTGAAGACTGGAGGCTaGACAGCTCCTCCACGTTCC +
Preference number: 5 (lower is better)
Translates to: SLRWSREGLAHQKRNTRALKTGG*TAPPRS
Trigger: GGAACGTGGAGGAGCTGTCAAGCCTCCAGTCTTCAA...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 90 bp AACTCTAAAGCTTCCCCAAAGAACCGACTGGAATCCAGATCTTTGTaGGGCTCCACCACCTTCTGCCCACCCTGCTCATGCTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: NSKASPKNRLESRSL*GSTTFCPPCSCSCW
Trigger: CCAGCAGGAGCATGAGCAGGGTGGGCAGAAGGTGGTGGAGCCTCACAAAGATCTGGATTCCAGTCGGTTCTTTGGGGAAGCTTTAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp CTTCAGACGCTGCCTAGGAGGGACAGAGGAGCAAGCACTAAGCTCTaGAGCAAGCTTCTTGGGCTCTCCAATACTGTTGCTAGGGTGACT +
Preference number: 5 (lower is better)
Translates to: LQTLPRRDRGASTKL*SKLLGLSNTVARVT
Trigger: AGTCACCCTAGCAACAGTATTGGAGAGCCCAAGAAGCTTGCTCCAGAGCTTAGTGCTTGCTCCTCTGTCCCTCCTAGGCAGCGTCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp TCCATACCGGATGAGCCTCACTGGGTCTGGATAAAGTGGCAAGGCTaGAATTACAGAGCTGGCATTGTCCAAAGTGGGGCTGGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: SIPDEPHWVWIKWQG*NYRAGIVQSGAGFG
Trigger: CCCAAACCCAGCCCCACTTTGGACAATGCCAGCTCTGTAATTCCAGCCTTGCCACTTTATCCAGACCCAGTGAGGCTCATCCGGTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTTGCTTCAAACGACTCTaGGCGGCTGGTGTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGCFKRL*AAGVLD
Trigger: GTCAAGAACACCAGCCGCCAAGAGTCGTTTGAAGCA...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp AGTCTCAGGTGGAGCAGGGAAGGGCTAGCTCACCAGAAGAGGAATACAAGAGCCGGGACCAAGTTCAAGTaGGCCAAGTGCACAGCTTTG +
Preference number: 5 (lower is better)
Translates to: SLRWSREGLAHQKRNTRAGTKFK*AKCTAL
Trigger: CAAAGCTGTGCACTTGGCCAACTTGAACTTGGTCCC...GGCTCTTGTATTCCTCTTCTGGTGAGCTAGCCCTTCCCTGCTCCACCTGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 90 bp GGCTTGACAGCTCCTCCACGTTCCGGGGAACACCATGGGTATTCTTaGCATGCTGCATTAACTCTGGTTTCTGCAGAAACAGCAGTGGGC +
Preference number: 5 (lower is better)
Translates to: GLTAPPRSGEHHGYS*HAALTLVSAETAVG
Trigger: GCCCACTGCTGTTTCTGCAGAAACCAGAGTTAATGCAGCATGTCAAGAATACCCATGGTGTTCCCCGGAACGTGGAGGAGCTGTCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp CGATACACATGCCTGAAGACTTCAGGGGACTCTCATTCTCCTCACTaGGAGCCTGGATGGCCTCCTTTGCATCAAGACTTGTGGGATCTG +
Preference number: 5 (lower is better)
Translates to: RYTCLKTSGDSHSPH*EPGWPPLHQDLWDL
Trigger: CAGATCCCACAAGTCTTGATGCAAAGGAGGCCATCCAGGCTCCCAGTGAGGAGAATGAGAGTCCCCTGAAGTCTTCAGGCATGTGTATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp TCTTTGACAGGATCCTCAGGCTCTGGGCTAGAGATTGGGCTGAACTaGTTGAAGGTGGGTAATGGCTCCGACTTGGAAGGCTCTAGCTTG +
Preference number: 5 (lower is better)
Translates to: SLTGSSGSGLEIGLN*LKVGNGSDLEGSSL
Trigger: CAAGCTAGAGCCTTCCAAGTCGGAGCCATTACCCACCTTCAACCAGTTCAGCCCAATCTCTAGCCCAGAGCCTGAGGATCCTGTCAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp ATGGGGCAGAATGCACATTTGTGGAAGACCTGGCAGTGTCGCTCCTaGATGTGGCTTTTCAGCAAGGCCAAAGTCAGGTGGATGACACCA +
Preference number: 5 (lower is better)
Translates to: MGQNAHLWKTWQCRS*MWLFSKAKVRWMTP
Trigger: TGGTGTCATCCACCTGACTTTGGCCTTGCTGAAAAGCCACATCCAGGAGCGACACTGCCAGGTCTTCCACAAATGTGCATTCTGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTATTGGGCTGAACTGGTaGAAGGTGGGTAATGGCTCC +
Preference number: 5 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGIGLNW*KVGNGS
Trigger: GGAGCCATTACCCACCTTCAACCAGTTCAGCCCAAT...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTGTGCTCTGTTGCTTCTaGCTTGCCTGTGAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGVLCCF*LACEFR
Trigger: CCTGAACTCACAGGCAAGCAAGAAGCAACAGAGCAC...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp TTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAAGTACTACTGGCAGTCTaGAAGGCCATGGGGCAGAAT +
Preference number: 5 (lower is better)
Translates to: FPSLSAGEAEKWRPCQKEVLLAV*KAMGQN
Trigger: ATTCTGCCCCATGGCCTTCAAGACTGCCAGTAGTAC...TTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp GCTTGCTTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGTTTACTGTGTCATGGTaGTTGCGAATGTGTTTGCGC +
Preference number: 5 (lower is better)
Translates to: ACFPSLSAGEAEKWRPCQFTVSW*LRMCLR
Trigger: GCGCAAACACATTCGCAACAACCATGACACAGTAAA...CTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTTCCTGGTCTCTCACTTaGTGGACTATGAACAGGTGG +
Preference number: 5 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGSWSLT*WTMNRW
Trigger: CCACCTGTTCATAGTCCACAAAGTGAGAGACCAGGA...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp AGGAGACTGGGAGCAATGTGGTCTTTCTCTGCTTCAAACGACTCTTaGCGGCTGGTGTTCTTGACAATGACACTCACGGCTGGCACATCT +
Preference number: 5 (lower is better)
Translates to: RRLGAMWSFSASNDS*RLVFLTMTLTAGTS
Trigger: AGATGTGCCAGCCGTGAGTGTCATTGTCAAGAACACCAGCCGCCAAGAGTCGTTTGAAGCAGAGAAAGACCACATTGCTCCCAGTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp AGGTCTGAGCCCCGGAATCCATTATGTAGGAGACTGGGAGCAATGTaGTCTTTCTCTGCTTCAAACGACTCTTGGCGGCTGGTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: RSEPRNPLCRRLGAM*SFSASNDSWRLVFL
Trigger: CAAGAACACCAGCCGCCAAGAGTCGTTTGAAGCAGAGAAAGACCACATTGCTCCCAGTCTCCTACATAATGGATTCCGGGGCTCAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp AGCTGGATGAGGATTCCTACCTCTGCTGAGAGAGGAGCCCATGAGGATGAGGGTACACAAGAGGATAACTaGGAATGGGCTGGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: SWMRIPTSAERGAHEDEGTQEDN*EWAGFR
Trigger: TCTGAAGCCAGCCCATTCCAAGTTATCCTCTTGTGT...ACCCTCATCCTCATGGGCTCCTCTCTCAGCAGAGGTAGGAATCCTCATCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp GAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACCACAGCCCGACATGTGCCTCTTCTTATaGAAGACCATTTCACAGGAG +
Preference number: 5 (lower is better)
Translates to: ELFISHGLHSSWRVPQPDMCLFL*KTISQE
Trigger: CTCCTGTGAAATGGTCTTCAATAAGAAGAGGCACAT...GTCGGGCTGTGGTACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAATCCTCATCCGGGGCCTaGCTTCAGCCCTGCGGTGAG +
Preference number: 5 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQSSSGA*LQPCGE
Trigger: CTCACCGCAGGGCTGAAGCAAGGCCCCGGATGAGGA...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTACTGTGTCATGGTTGTaGCGAATGTGTTTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGTVSWL*RMCLRR
Trigger: CCTGCGCAAACACATTCGCAACAACCATGACACAGT...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 90 bp TTGACAATGACACTCACGGCTGGCACATCTGGGGCTGATCCTGAGTaGGACAAGGACACATTCTCATCGATACACATGCCTGAAGACTTC +
Preference number: 5 (lower is better)
Translates to: LTMTLTAGTSGADPE*DKDTFSSIHMPEDF
Trigger: GAAGTCTTCAGGCATGTGTATCGATGAGAATGTGTCCTTGTCGCACTCAGGATCAGCCCCAGATGTGCCAGCCGTGAGTGTCATTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 90 bp GGAACACCATGGGTATTCTTGACATGCTGCATTAACTCTGGTTTCTaGAGAAACAGCAGTGGGCACTCAGGGCACTTGAAAACACCCGCC +
Preference number: 5 (lower is better)
Translates to: GTPWVFLTCCINSGF*RNSSGHSGHLKTPA
Trigger: GGCGGGTGTTTTCAAGTGCCCTGAGTGCCCACTGCTGTTTCTGCAGAAACCAGAGTTAATGCAGCATGTCAAGAATACCCATGGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp ACATTTGGTTCCATACCGGATGAGCCTCACTGGGTCTGGATAAAGTaGCAAGGCTGGAATTACAGAGCTGGCATTGTCCAAAGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: TFGSIPDEPHWVWIK*QGWNYRAGIVQSGA
Trigger: AGCCCCACTTTGGACAATGCCAGCTCTGTAATTCCAGCCTTGCCACTTTATCCAGACCCAGTGAGGCTCATCCGGTATGGAACCAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTCCTTTGCATCAAGACTaGTGGGATCTGGGATGTCAA +
Preference number: 5 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGPLHQD*WDLGCQ
Trigger: TTGACATCCCAGATCCCACAAGTCTTGATGCAAAGG...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp AAACACTGCGACAGAGCTCTTTATTTCCCACGGTCTGCACAGCAGCTGGAGGGTTTGGAAGGCTCTAGCTaGCTTGTGAAACTCCTAGCA +
Preference number: 5 (lower is better)
Translates to: KHCDRALYFPRSAQQLEGLEGSS*LVKLLA
Trigger: TGCTAGGAGTTTCACAAGCAAGCTAGAGCCTTCCAA...ACCCTCCAGCTGCTGTGCAGACCGTGGGAAATAAAGAGCTCTGTCGCAGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 90 bp ACACTCAGGACATTTGGTTCCATACCGGATGAGCCTCACTGGGTCTaGATAAAGTGGCAAGGCTGGAATTACAGAGCTGGCATTGTCCAA +
Preference number: 5 (lower is better)
Translates to: TLRTFGSIPDEPHWV*IKWQGWNYRAGIVQ
Trigger: TTGGACAATGCCAGCTCTGTAATTCCAGCCTTGCCACTTTATCCAGACCCAGTGAGGCTCATCCGGTATGGAACCAAATGTCCTGAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 90 bp AGCTCTGGAGCAAGCTTCTTGGGCTCTCCAATACTGTTGCTAGGGTaGCTATTGAACTCTAAAGCTTCCCCAAAGAACCGACTGGAATCC +
Preference number: 5 (lower is better)
Translates to: SSGASFLGSPILLLG*LLNSKASPKNRLES
Trigger: GGATTCCAGTCGGTTCTTTGGGGAAGCTTTAGAGTTCAATAGTCACCCTAGCAACAGTATTGGAGAGCCCAAGAAGCTTGCTCCAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAACAGCAGGGGACTTGCTaGGATCATCAGGGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQQQGTC*DHQGLA
Trigger: TGCCAGACCCTGATGATCCAAGCAAGTCCCCTGCTG...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp TTCCCTTCACTGTCAGCTGGGGAAGCAGAGAAGTGGAGGCCTTGCCAGAAAGAAGAAGAGTCACTGGTTTaGATCATATTCTCATCCCCT +
Preference number: 5 (lower is better)
Translates to: FPSLSAGEAEKWRPCQKEEESLV*IIFSSP
Trigger: AGGGGATGAGAATATGATCAAAACCAGTGACTCTTC...TTCTTTCTGGCAAGGCCTCCACTTCTCTGCTTCCCCAGCTGACAGTGAAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGGGGCAGAATGCACATTaGTGGAAGACCTGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRGQNAH*WKTWQC
Trigger: ACACTGCCAGGTCTTCCACAAATGTGCATTCTGCCC...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAAGACTCAGCAGGGGACTaGCTTGGATCATCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQDSAGD*LGSSGS
Trigger: AGACCCTGATGATCCAAGCAAGTCCCCTGCTGAGTC...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAAGGTAATGGCTCCGACTaGGAAGGCTCTAGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQGNGSD*EGSSLL
Trigger: AAGCAAGCTAGAGCCTTCCAAGTCGGAGCCATTACC...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAATCTGTTGCTTCTTGCTaGCCTGTGAGTTCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQSVASC*PVSSGQ
Trigger: CTGCCCTGAACTCACAGGCAAGCAAGAAGCAACAGA...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp TTTCCCACAGCAGGTCCTATTCTACTATTCCAAGAGGCTGGATCTGATATGAGGAGCAGACTGCACTTGTaGAAGAAGAGCAGTGTCTTA +
Preference number: 5 (lower is better)
Translates to: FPTAGPILLFQEAGSDMRSRLHL*KKSSVL
Trigger: TAAGACACTGCTCTTCTTCAACAAGTGCAGTCTGCT...CCTCATATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp GTCTCTGAATGTTGTATGAATGTCACAGAATTCCTTCTCCTCGTTCCTCACCAACCAAACCCATTATCTTaGACAGGATCCTCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: VSECCMNVTEFLLLVPHQPNPLS*TGSSGS
Trigger: AGAGCCTGAGGATCCTGTCAAAGATAATGGGTTTGG...TTGGTGAGGAACGAGGAGAAGGAATTCTGTGACATTCATACAACATTCAGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCTGCATGACAAGTCCCTaGCTCTTGTGGTCACGGGCA +
Preference number: 5 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFCMTSP*LLWSRA
Trigger: TGCCCGTGACCACAAGAGCAAGGGACTTGTCATGCA...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCTTGATTCTGAGGGTCTaGGGCACTGTCTTCATCCAG +
Preference number: 5 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFLILRV*GTVFIQ
Trigger: CTGGATGAAGACAGTGCCCAAGACCCTCAGAATCAA...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCGGGCTATCAGATGGCTaGATACTTTTTCTAGTGGCC +
Preference number: 5 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFGLSDG*ILFLVA
Trigger: GGCCACTAGAAAAAGTATCAAGCCATCTGATAGCCC...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS-3UTR CAA 90 bp CAGACTGTTTACATAAGAGGCAAATTCTTTACAACAATTAGTCCACGGAAATTCGTTTTGATTCTGACTTaGGGAATTGCTGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: QTVYIRGKFFTTISPRKFVLILT*GIAGGE
Trigger: CTCCCCACCAGCAATTCCCAAAGTCAGAATCAAAAC...GAATTTCCGTGGACTAATTGTTGTAAAGAATTTGCCTCTTATGTAAACAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp CATCCGGGGCCTTGCTTCAGCCCTGCGGTGAGCTTCTaGCCGGCCCCAACGGCCAGCAGTCAGGGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: HPGPCFSPAVSF*PAPTASSQGAA
Trigger: GGCAGCTCCCTGACTGCTGGCCGTTGGGGCCGGCCAGAAGCTCACCGCAGGGCTGAAGCAAGGCCCCGGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 72 bp CCTGACAGGTCCAACCAGTGCTCCTCATCCGGGGCCTaGCTTCAGCCCTGCGGTGAGCTTCTGGCCGGCCCC +
Preference number: 6 (lower is better)
Translates to: PDRSNQCSSSGA*LQPCGELLAGP
Trigger: GGGGCCGGCCAGAAGCTCACCGCAGGGCTGAAGCAAGGCCCCGGATGAGGAGCACTGGTTGGACCTGTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 90 bp CTTGGCACTCCTGACAGGTCCAACCAGTGCTCCTCATCCGGGGCCTaGCTTCAGCCCTGCGGTGAGCTTCTGGCCGGCCCCAACGGCCAG +
Preference number: 6 (lower is better)
Translates to: LGTPDRSNQCSSSGA*LQPCGELLAGPNGQ
Trigger: CTGGCCGTTGGGGCCGGCCAGAAGCTCACCGCAGGGCTGAAGCAAGGCCCCGGATGAGGAGCACTGGTTGGACCTGTCAGGAGTGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 72 bp CTGACAGGTCCAACCAGTGCTCCTCATCCGGGGCCTTaGTTCAGCCCTGCGGTGAGCTTCTGGCCGGCCCCA +
Preference number: 6 (lower is better)
Translates to: LTGPTSAPHPGP*FSPAVSFWPAP
Trigger: TGGGGCCGGCCAGAAGCTCACCGCAGGGCTGAAGCAAGGCCCCGGATGAGGAGCACTGGTTGGACCTGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp CAAACGCGTCTCCGCACTCCAGGCAGCAGTACCCACTaGCCGGCACGTGGATTCTGCTGTCTGCAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: QTRLRTPGSSTH*PARGFCCLQVG
Trigger: GCCCACCTGCAGACAGCAGAATCCACGTGCCGGCCAGTGGGTACTGCTGCCTGGAGTGCGGAGACGCGTTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp CAAAGTGGGGCTGGGTTTGGGGGAGGAAGAAGCGGCTaGGGTTGCTGGTGCAGTGGAGTTCACGGGAGCCGC +
Preference number: 6 (lower is better)
Translates to: QSGAGFGGGRSG*GCWCSGVHGSR
Trigger: GCGGCTCCCGTGAACTCCACTGCACCAGCAACCCCAGCCGCTTCTTCCTCCCCCAAACCCAGCCCCACTTTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp CCGCACTCCAGGCAGCAGTACCCACTGGCCGGCACGTaGATTCTGCTGTCTGCAGGTGGGCTGAGATTTGGC +
Preference number: 6 (lower is better)
Translates to: PHSRQQYPLAGT*ILLSAGGLRFG
Trigger: GCCAAATCTCAGCCCACCTGCAGACAGCAGAATCCACGTGCCGGCCAGTGGGTACTGCTGCCTGGAGTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp AGTCAGGGAGCTGCCTCTAGCGGCTACATTTGTAGCTaGGGGCTCGGCAGGAGCTCGAGAGCCAGGGCGGTT +
Preference number: 6 (lower is better)
Translates to: SQGAASSGYICS*GLGRSSRARAV
Trigger: AACCGCCCTGGCTCTCGAGCTCCTGCCGAGCCCCCAGCTACAAATGTAGCCGCTAGAGGCAGCTCCCTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 72 bp GCAGTACCCACTGGCCGGCACGTGGATTCTGCTGTCTaGAGGTGGGCTGAGATTTGGCGCATAGAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: AVPTGRHVDSAV*RWAEIWRIEGH
Trigger: GTGCCCCTCTATGCGCCAAATCTCAGCCCACCTGCAGACAGCAGAATCCACGTGCCGGCCAGTGGGTACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 72 bp GGGTTTGGGGGAGGAAGAAGCGGCTGGGGTTGCTGGTaGAGTGGAGTTCACGGGAGCCGCCACAAACATCTG +
Preference number: 6 (lower is better)
Translates to: GFGGGRSGWGCW*SGVHGSRHKHL
Trigger: CAGATGTTTGTGGCGGCTCCCGTGAACTCCACTGCACCAGCAACCCCAGCCGCTTCTTCCTCCCCCAAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 72 bp GAACCCACTCTTGGCACTCCTGACAGGTCCAACCAGTaGTCCTCATCCGGGGCCTTGCTTCAGCCCTGCGGT +
Preference number: 6 (lower is better)
Translates to: EPTLGTPDRSNQ*SSSGALLQPCG
Trigger: ACCGCAGGGCTGAAGCAAGGCCCCGGATGAGGAGCACTGGTTGGACCTGTCAGGAGTGCCAAGAGTGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp CCCACTGGCCGGCACGTGGATTCTGCTGTCTGCAGGTaGGCTGAGATTTGGCGCATAGAGGGGCACAGGGTT +
Preference number: 6 (lower is better)
Translates to: PTGRHVDSAVCR*AEIWRIEGHRV
Trigger: AACCCTGTGCCCCTCTATGCGCCAAATCTCAGCCCACCTGCAGACAGCAGAATCCACGTGCCGGCCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp GCTGGGTTTGGGGGAGGAAGAAGCGGCTGGGGTTGCTaGTGCAGTGGAGTTCACGGGAGCCGCCACAAACAT +
Preference number: 6 (lower is better)
Translates to: AGFGGGRSGWGC*CSGVHGSRHKH
Trigger: ATGTTTGTGGCGGCTCCCGTGAACTCCACTGCACCAGCAACCCCAGCCGCTTCTTCCTCCCCCAAACCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 90 bp GGAGCCTCAGTGATTGTGCTCCCTGCAGGGGACTCAGCAGGGGACTaGCTTGGATCATCAGGGTCTGGCAGGATCCTGGTAACCGTCCGT +
Preference number: 6 (lower is better)
Translates to: GASVIVLPAGDSAGD*LGSSGSGRILVTVR
Trigger: ACGGACGGTTACCAGGATCCTGCCAGACCCTGATGATCCAAGCAAGTCCCCTGCTGAGTCCCCTGCAGGGAGCACAATCACTGAGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 72 bp CTCTTCCACAGGCATGGCTGTGCCTTCATCCCCTGGTaGCTCACTTGGAGCCTCAGTGATTGTGCTCCCTGC +
Preference number: 6 (lower is better)
Translates to: LFHRHGCAFIPW*LTWSLSDCAPC
Trigger: GCAGGGAGCACAATCACTGAGGCTCCAAGTGAGGCACCAGGGGATGAAGGCACAGCCATGCCTGTGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 72 bp CTCTTTCGTCTCCATGGCTACCTCCTCTCCAGAGCATaGCTCGGAGTCTGGGGCTTCCACCTTCACCTCCAC +
Preference number: 6 (lower is better)
Translates to: LFRLHGYLLSRA*LGVWGFHLHLH
Trigger: GTGGAGGTGAAGGTGGAAGCCCCAGACTCCGAGGCATGCTCTGGAGAGGAGGTAGCCATGGAGACGAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp GTGCTCTTCCACAGGCATGGCTGTGCCTTCATCCCCTaGTGCCTCACTTGGAGCCTCAGTGATTGTGCTCCC +
Preference number: 6 (lower is better)
Translates to: VLFHRHGCAFIP*CLTWSLSDCAP
Trigger: GGGAGCACAATCACTGAGGCTCCAAGTGAGGCACCAGGGGATGAAGGCACAGCCATGCCTGTGGAAGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp GGTTTGTGGGGCTGGGTGGGGTGCTGGGTGGTACTGTaGTCCATCGTACTACTGGCAGTCTTGAAGGCCATG +
Preference number: 6 (lower is better)
Translates to: GLWGWVGCWVVL*SIVLLAVLKAM
Trigger: CATGGCCTTCAAGACTGCCAGTAGTACGATGGACCACAGTACCACCCAGCACCCCACCCAGCCCCACAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 90 bp CAGCGGGGGTTGATGCCTGAGGTGCTGTGCTCTGTTGCTTCTTGCTaGCCTGTGAGTTCAGGGCAGATCCTTTTGGGACCCTGGACCCAG +
Preference number: 6 (lower is better)
Translates to: QRGLMPEVLCSVASC*PVSSGQILLGPWTQ
Trigger: CTGGGTCCAGGGTCCCAAAAGGATCTGCCCTGAACTCACAGGCAAGCAAGAAGCAACAGAGCACAGCACCTCAGGCATCAACCCCCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 90 bp AGTTGGCCAAGTGCACAGCTTTGGGCAAGAGACTGGCAGCGGGGGTaGATGCCTGAGGTGCTGTGCTCTGTTGCTTCTTGCTTGCCTGTG +
Preference number: 6 (lower is better)
Translates to: SWPSAQLWARDWQRG*MPEVLCSVASCLPV
Trigger: CACAGGCAAGCAAGAAGCAACAGAGCACAGCACCTCAGGCATCAACCCCCGCTGCCAGTCTCTTGCCCAAAGCTGTGCACTTGGCCAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 72 bp TTTTCACCTGGTGGACCAGGGGCACTGTCATTTGCGTaGCCTGAGGCTGGCTCCGTCTCTGTGCTGAGGACT +
Preference number: 6 (lower is better)
Translates to: FSPGGPGALSFA*PEAGSVSVLRT
Trigger: AGTCCTCAGCACAGAGACGGAGCCAGCCTCAGGTCACGCAAATGACAGTGCCCCTGGTCCACCAGGTGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 72 bp CTGCCTCAGAAAAGTGCTCTTCCACAGGCATGGCTGTaGCTTCATCCCCTGGTGCCTCACTTGGAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: LPQKSALPQAWL*LHPLVPHLEPQ
Trigger: CTGAGGCTCCAAGTGAGGCACCAGGGGATGAAGGCACAGCCATGCCTGTGGAAGAGCACTTTTCTGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 72 bp AGAGACTGGCAGCGGGGGTTGATGCCTGAGGTGCTGTaGTCTGTTGCTTCTTGCTTGCCTGTGAGTTCAGGG +
Preference number: 6 (lower is better)
Translates to: RDWQRGLMPEVL*SVASCLPVSSG
Trigger: CCCTGAACTCACAGGCAAGCAAGAAGCAACAGAGCACAGCACCTCAGGCATCAACCCCCGCTGCCAGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 72 bp GCAACACTGTGGGGGACCAAGTTCAAGTTGGCCAAGTaGACAGCTTTGGGCAAGAGACTGGCAGCGGGGGTT +
Preference number: 6 (lower is better)
Translates to: ATLWGTKFKLAK*TALGKRLAAGV
Trigger: AACCCCCGCTGCCAGTCTCTTGCCCAAAGCTGTGCACTTGGCCAACTTGAACTTGGTCCCCCACAGTGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp TCAAGTTGGCCAAGTGCACAGCTTTGGGCAAGAGACTaGCAGCGGGGGTTGATGCCTGAGGTGCTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: SSWPSAQLWARD*QRGLMPEVLCS
Trigger: AGAGCACAGCACCTCAGGCATCAACCCCCGCTGCCAGTCTCTTGCCCAAAGCTGTGCACTTGGCCAACTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp CATGGCTACCTCCTCTCCAGAGCATGCCTCGGAGTCTaGGGCTTCCACCTTCACCTCCACAATGTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: HGYLLSRACLGV*GFHLHLHNVFS
Trigger: GGAGAAGACATTGTGGAGGTGAAGGTGGAAGCCCCAGACTCCGAGGCATGCTCTGGAGAGGAGGTAGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 72 bp GTGATTGTGCTCCCTGCAGGGGACTCAGCAGGGGACTaGCTTGGATCATCAGGGTCTGGCAGGATCCTGGTA +
Preference number: 6 (lower is better)
Translates to: VIVLPAGDSAGD*LGSSGSGRILV
Trigger: TACCAGGATCCTGCCAGACCCTGATGATCCAAGCAAGTCCCCTGCTGAGTCCCCTGCAGGGAGCACAATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 72 bp GCTTCTTGCTTGCCTGTGAGTTCAGGGCAGATCCTTTaGGGACCCTGGACCCAGAGATGCGGCAGGGAGATG +
Preference number: 6 (lower is better)
Translates to: ASCLPVSSGQIL*GPWTQRCGREM
Trigger: CATCTCCCTGCCGCATCTCTGGGTCCAGGGTCCCAAAAGGATCTGCCCTGAACTCACAGGCAAGCAAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 72 bp GCTTCCCCAAAGAACCGACTGGAATCCAGATCTTTGTaGGGCTCCACCACCTTCTGCCCACCCTGCTCATGC +
Preference number: 6 (lower is better)
Translates to: ASPKNRLESRSL*GSTTFCPPCSC
Trigger: GCATGAGCAGGGTGGGCAGAAGGTGGTGGAGCCTCACAAAGATCTGGATTCCAGTCGGTTCTTTGGGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 72 bp CTGAGGTGCTGTGCTCTGTTGCTTCTTGCTTGCCTGTaGGTTCAGGGCAGATCCTTTTGGGACCCTGGACCC +
Preference number: 6 (lower is better)
Translates to: LRCCALLLLACL*VQGRSFWDPGP
Trigger: GGGTCCAGGGTCCCAAAAGGATCTGCCCTGAACTCACAGGCAAGCAAGAAGCAACAGAGCACAGCACCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp GCCACCAAGGCTGCAACACAAGAGGATAACTTGGAATaGGCTGGCTTCAGACGCTGCCTAGGAGGGACAGAG +
Preference number: 6 (lower is better)
Translates to: ATKAATQEDNLE*AGFRRCLGGTE
Trigger: CTCTGTCCCTCCTAGGCAGCGTCTGAAGCCAGCCCATTCCAAGTTATCCTCTTGTGTTGCAGCCTTGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp GGACTCAGCAGGGGACTTGCTTGGATCATCAGGGTCTaGCAGGATCCTGGTAACCGTCCGTTTGATTTCCCC +
Preference number: 6 (lower is better)
Translates to: GLSRGLAWIIRV*QDPGNRPFDFP
Trigger: GGGGAAATCAAACGGACGGTTACCAGGATCCTGCCAGACCCTGATGATCCAAGCAAGTCCCCTGCTGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp TTGCCTGTGAGTTCAGGGCAGATCCTTTTGGGACCCTaGACCCAGAGATGCGGCAGGGAGATGAAGAGTCAC +
Preference number: 6 (lower is better)
Translates to: LPVSSGQILLGP*TQRCGREMKSH
Trigger: GTGACTCTTCATCTCCCTGCCGCATCTCTGGGTCCAGGGTCCCAAAAGGATCTGCCCTGAACTCACAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp CAGATGCGGCAACACTGTGGGGGACCAAGTTCAAGTTaGCCAAGTGCACAGCTTTGGGCAAGAGACTGGCAG +
Preference number: 6 (lower is better)
Translates to: QMRQHCGGPSSS*PSAQLWARDWQ
Trigger: CTGCCAGTCTCTTGCCCAAAGCTGTGCACTTGGCCAACTTGAACTTGGTCCCCCACAGTGTTGCCGCATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp GCTGAGGACTTGGCAGTCACAGATGCGGCAACACTGTaGGGGACCAAGTTCAAGTTGGCCAAGTGCACAGCT +
Preference number: 6 (lower is better)
Translates to: AEDLAVTDAATL*GTKFKLAKCTA
Trigger: AGCTGTGCACTTGGCCAACTTGAACTTGGTCCCCCACAGTGTTGCCGCATCTGTGACTGCCAAGTCCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp CACGTGGATTCTGCTGTCTGCAGGTGGGCTGAGATTTaGCGCATAGAGGGGCACAGGGTTAGAGCTGTGAAG +
Preference number: 6 (lower is better)
Translates to: HVDSAVCRWAEI*RIEGHRVRAVK
Trigger: CTTCACAGCTCTAACCCTGTGCCCCTCTATGCGCCAAATCTCAGCCCACCTGCAGACAGCAGAATCCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp GAGCCAGGGCGGTTAGAAGATGTGTCTGTTGAAGACTaGAGGCTTGACAGCTCCTCCACGTTCCGGGGAACA +
Preference number: 6 (lower is better)
Translates to: EPGRLEDVSVED*RLDSSSTFRGT
Trigger: TGTTCCCCGGAACGTGGAGGAGCTGTCAAGCCTCCAGTCTTCAACAGACACATCTTCTAACCGCCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 90 bp CTTTTGGCCTGTAAGGCCACCAAGGCTGCAACACAAGAGGATAACTaGGAATGGGCTGGCTTCAGACGCTGCCTAGGAGGGACAGAGGAG +
Preference number: 6 (lower is better)
Translates to: LLACKATKAATQEDN*EWAGFRRCLGGTEE
Trigger: CTCCTCTGTCCCTCCTAGGCAGCGTCTGAAGCCAGCCCATTCCAAGTTATCCTCTTGTGTTGCAGCCTTGGTGGCCTTACAGGCCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 90 bp TGCTCTGTTGCTTCTTGCTTGCCTGTGAGTTCAGGGCAGATCCTTTaGGGACCCTGGACCCAGAGATGCGGCAGGGAGATGAAGAGTCAC +
Preference number: 6 (lower is better)
Translates to: CSVASCLPVSSGQIL*GPWTQRCGREMKSH
Trigger: GTGACTCTTCATCTCCCTGCCGCATCTCTGGGTCCAGGGTCCCAAAAGGATCTGCCCTGAACTCACAGGCAAGCAAGAAGCAACAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 90 bp CTTTTTCATGTGAGACACGTAGCTCTCTCGATCAGGAACCCACTCTaGGCACTCCTGACAGGTCCAACCAGTGCTCCTCATCCGGGGCCT +
Preference number: 6 (lower is better)
Translates to: LFHVRHVALSIRNPL*ALLTGPTSAPHPGP
Trigger: AGGCCCCGGATGAGGAGCACTGGTTGGACCTGTCAGGAGTGCCAAGAGTGGGTTCCTGATCGAGAGAGCTACGTGTCTCACATGAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 72 bp TTGTTGCGAATGTGTTTGCGCAGGCTGCTAGGGTTGTaGAAGGACTGTTCACACTGCCGGCATGGGTACCGC +
Preference number: 6 (lower is better)
Translates to: LLRMCLRRLLGL*KDCSHCRHGYR
Trigger: GCGGTACCCATGCCGGCAGTGTGAACAGTCCTTTCACAACCCTAGCAGCCTGCGCAAACACATTCGCAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp TCCACCACCTTCTGCCCACCCTGCTCATGCTCCTGCTaGCTCTCTAAAGGCAAGGGTTCTGGTTTAGGTTCT +
Preference number: 6 (lower is better)
Translates to: STTFCPPCSCSC*LSKGKGSGLGS
Trigger: AGAACCTAAACCAGAACCCTTGCCTTTAGAGAGCCAGCAGGAGCATGAGCAGGGTGGGCAGAAGGTGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp GGTCTGGATAAAGTGGCAAGGCTGGAATTACAGAGCTaGCATTGTCCAAAGTGGGGCTGGGTTTGGGGGAGG +
Preference number: 6 (lower is better)
Translates to: GLDKVARLELQS*HCPKWGWVWGR
Trigger: CCTCCCCCAAACCCAGCCCCACTTTGGACAATGCCAGCTCTGTAATTCCAGCCTTGCCACTTTATCCAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp AAATCAGGGTTTCTGATACCGTGCATAAGGCTAATGTaGCTCTCCAGGAGGGAGGGCCGAGGAAAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: KSGFLIPCIRLM*LSRREGRGKLG
Trigger: CCCCAGCTTTCCTCGGCCCTCCCTCCTGGAGAGCCACATTAGCCTTATGCACGGTATCAGAAACCCTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 72 bp TCCTCAGGCTCTGGGCTAGAGATTGGGCTGAACTGGTaGAAGGTGGGTAATGGCTCCGACTTGGAAGGCTCT +
Preference number: 6 (lower is better)
Translates to: SSGSGLEIGLNW*KVGNGSDLEGS
Trigger: AGAGCCTTCCAAGTCGGAGCCATTACCCACCTTCAACCAGTTCAGCCCAATCTCTAGCCCAGAGCCTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 72 bp TGTAAGGCCACCAAGGCTGCAACACAAGAGGATAACTaGGAATGGGCTGGCTTCAGACGCTGCCTAGGAGGG +
Preference number: 6 (lower is better)
Translates to: CKATKAATQEDN*EWAGFRRCLGG
Trigger: CCCTCCTAGGCAGCGTCTGAAGCCAGCCCATTCCAAGTTATCCTCTTGTGTTGCAGCCTTGGTGGCCTTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 72 bp ACAGATGCGGCAACACTGTGGGGGACCAAGTTCAAGTaGGCCAAGTGCACAGCTTTGGGCAAGAGACTGGCA +
Preference number: 6 (lower is better)
Translates to: TDAATLWGTKFK*AKCTALGKRLA
Trigger: TGCCAGTCTCTTGCCCAAAGCTGTGCACTTGGCCAACTTGAACTTGGTCCCCCACAGTGTTGCCGCATCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 72 bp GTGAGACACGTAGCTCTCTCGATCAGGAACCCACTCTaGGCACTCCTGACAGGTCCAACCAGTGCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: VRHVALSIRNPL*ALLTGPTSAPH
Trigger: ATGAGGAGCACTGGTTGGACCTGTCAGGAGTGCCAAGAGTGGGTTCCTGATCGAGAGAGCTACGTGTCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 72 bp TCTTGGGCACTGTCTTCATCCAGAGCCAGACCTTGCTaGCCTCCTAGGTCAGTAACCAAAGGCTCACTGGCA +
Preference number: 6 (lower is better)
Translates to: SWALSSSRARPC*PPRSVTKGSLA
Trigger: TGCCAGTGAGCCTTTGGTTACTGACCTAGGAGGTCAGCAAGGTCTGGCTCTGGATGAAGACAGTGCCCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 72 bp CTCATTCTCCTCACTGGGAGCCTGGATGGCCTCCTTTaGATCAAGACTTGTGGGATCTGGGATGTCAAAGGC +
Preference number: 6 (lower is better)
Translates to: LILLTGSLDGLL*IKTCGIWDVKG
Trigger: GCCTTTGACATCCCAGATCCCACAAGTCTTGATGCAAAGGAGGCCATCCAGGCTCCCAGTGAGGAGAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 72 bp ACACTCACGGCTGGCACATCTGGGGCTGATCCTGAGTaGGACAAGGACACATTCTCATCGATACACATGCCT +
Preference number: 6 (lower is better)
Translates to: TLTAGTSGADPE*DKDTFSSIHMP
Trigger: AGGCATGTGTATCGATGAGAATGTGTCCTTGTCGCACTCAGGATCAGCCCCAGATGTGCCAGCCGTGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS GCA 72 bp CAAGAGGATAACTTGGAATGGGCTGGCTTCAGACGCTaGCTAGGAGGGACAGAGGAGCAAGCACTAAGCTCT +
Preference number: 6 (lower is better)
Translates to: QEDNLEWAGFRR*LGGTEEQALSS
Trigger: AGAGCTTAGTGCTTGCTCCTCTGTCCCTCCTAGGCAGCGTCTGAAGCCAGCCCATTCCAAGTTATCCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp TGCCTGAAGACTTCAGGGGACTCTCATTCTCCTCACTaGGAGCCTGGATGGCCTCCTTTGCATCAAGACTTG +
Preference number: 6 (lower is better)
Translates to: CLKTSGDSHSPH*EPGWPPLHQDL
Trigger: CAAGTCTTGATGCAAAGGAGGCCATCCAGGCTCCCAGTGAGGAGAATGAGAGTCCCCTGAAGTCTTCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp CTGCCTAGGAGGGACAGAGGAGCAAGCACTAAGCTCTaGAGCAAGCTTCTTGGGCTCTCCAATACTGTTGCT +
Preference number: 6 (lower is better)
Translates to: LPRRDRGASTKL*SKLLGLSNTVA
Trigger: AGCAACAGTATTGGAGAGCCCAAGAAGCTTGCTCCAGAGCTTAGTGCTTGCTCCTCTGTCCCTCCTAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 72 bp TTCTCTGCTTCAAACGACTCTTGGCGGCTGGTGTTCTaGACAATGACACTCACGGCTGGCACATCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: FSASNDSWRLVF*TMTLTAGTSGA
Trigger: AGCCCCAGATGTGCCAGCCGTGAGTGTCATTGTCAAGAACACCAGCCGCCAAGAGTCGTTTGAAGCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 72 bp CTGTCACTGCAGATGCTCCGAGGGCTATCAGATGGCTaGATACTTTTTCTAGTGGCCTCTAGAGGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: LSLQMLRGLSDG*ILFLVASRGLR
Trigger: CCGGAGCCCTCTAGAGGCCACTAGAAAAAGTATCAAGCCATCTGATAGCCCTCGGAGCATCTGCAGTGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 90 bp ATGTGGTCTTTCTCTGCTTCAAACGACTCTTGGCGGCTGGTGTTCTaGACAATGACACTCACGGCTGGCACATCTGGGGCTGATCCTGAG +
Preference number: 6 (lower is better)
Translates to: MWSFSASNDSWRLVF*TMTLTAGTSGADPE
Trigger: CTCAGGATCAGCCCCAGATGTGCCAGCCGTGAGTGTCATTGTCAAGAACACCAGCCGCCAAGAGTCGTTTGAAGCAGAGAAAGACCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 90 bp TTGACAGGATCCTCAGGCTCTGGGCTAGAGATTGGGCTGAACTGGTaGAAGGTGGGTAATGGCTCCGACTTGGAAGGCTCTAGCTTGCTT +
Preference number: 6 (lower is better)
Translates to: LTGSSGSGLEIGLNW*KVGNGSDLEGSSLL
Trigger: AAGCAAGCTAGAGCCTTCCAAGTCGGAGCCATTACCCACCTTCAACCAGTTCAGCCCAATCTCTAGCCCAGAGCCTGAGGATCCTGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 90 bp TTGCTGCTGCTGTCACTGCAGATGCTCCGAGGGCTATCAGATGGCTaGATACTTTTTCTAGTGGCCTCTAGAGGGCTCCGGGGACTCTTT +
Preference number: 6 (lower is better)
Translates to: LLLLSLQMLRGLSDG*ILFLVASRGLRGLF
Trigger: AAAGAGTCCCCGGAGCCCTCTAGAGGCCACTAGAAAAAGTATCAAGCCATCTGATAGCCCTCGGAGCATCTGCAGTGACAGCAGCAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 72 bp AGGAATCCTTTGTGTGACCAGGCTGATCCTCTTTGGTaGCATTGGCCACCCTTTTGGCCTGTAAGGCCACCA +
Preference number: 6 (lower is better)
Translates to: RNPLCDQADPLW*HWPPFWPVRPP
Trigger: TGGTGGCCTTACAGGCCAAAAGGGTGGCCAATGTCACCAAAGAGGATCAGCCTGGTCACACAAAGGATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp CCCCGGAATCCATTATGTAGGAGACTGGGAGCAATGTaGTCTTTCTCTGCTTCAAACGACTCTTGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: PRNPLCRRLGAM*SFSASNDSWRL
Trigger: CAGCCGCCAAGAGTCGTTTGAAGCAGAGAAAGACCACATTGCTCCCAGTCTCCTACATAATGGATTCCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp CCCAAACCCATTATCTTTGACAGGATCCTCAGGCTCTaGGCTAGAGATTGGGCTGAACTGGTTGAAGGTGGG +
Preference number: 6 (lower is better)
Translates to: PKPIIFDRILRL*ARDWAELVEGG
Trigger: CCCACCTTCAACCAGTTCAGCCCAATCTCTAGCCCAGAGCCTGAGGATCCTGTCAAAGATAATGGGTTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp GATGAGCCTCACTGGGTCTGGATAAAGTGGCAAGGCTaGAATTACAGAGCTGGCATTGTCCAAAGTGGGGCT +
Preference number: 6 (lower is better)
Translates to: DEPHWVWIKWQG*NYRAGIVQSGA
Trigger: AGCCCCACTTTGGACAATGCCAGCTCTGTAATTCCAGCCTTGCCACTTTATCCAGACCCAGTGAGGCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp CATTTGTGGAAGACCTGGCAGTGTCGCTCCTGGATGTaGCTTTTCAGCAAGGCCAAAGTCAGGTGGATGACA +
Preference number: 6 (lower is better)
Translates to: HLWKTWQCRSWM*LFSKAKVRWMT
Trigger: TGTCATCCACCTGACTTTGGCCTTGCTGAAAAGCCACATCCAGGAGCGACACTGCCAGGTCTTCCACAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp AATGCACATTTGTGGAAGACCTGGCAGTGTCGCTCCTaGATGTGGCTTTTCAGCAAGGCCAAAGTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: NAHLWKTWQCRS*MWLFSKAKVRW
Trigger: CCACCTGACTTTGGCCTTGCTGAAAAGCCACATCCAGGAGCGACACTGCCAGGTCTTCCACAAATGTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 72 bp TCTCATTCTCCTCACTGGGAGCCTGGATGGCCTCCTTaGCATCAAGACTTGTGGGATCTGGGATGTCAAAGG +
Preference number: 6 (lower is better)
Translates to: SHSPHWEPGWPP*HQDLWDLGCQR
Trigger: CCTTTGACATCCCAGATCCCACAAGTCTTGATGCAAAGGAGGCCATCCAGGCTCCCAGTGAGGAGAATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 72 bp GGGAGCAATGTGGTCTTTCTCTGCTTCAAACGACTCTaGGCGGCTGGTGTTCTTGACAATGACACTCACGGC +
Preference number: 6 (lower is better)
Translates to: GSNVVFLCFKRL*AAGVLDNDTHG
Trigger: GCCGTGAGTGTCATTGTCAAGAACACCAGCCGCCAAGAGTCGTTTGAAGCAGAGAAAGACCACATTGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 90 bp AGGCTTGACAGCTCCTCCACGTTCCGGGGAACACCATGGGTATTCTaGACATGCTGCATTAACTCTGGTTTCTGCAGAAACAGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: RLDSSSTFRGTPWVF*TCCINSGFCRNSSG
Trigger: CCCACTGCTGTTTCTGCAGAAACCAGAGTTAATGCAGCATGTCAAGAATACCCATGGTGTTCCCCGGAACGTGGAGGAGCTGTCAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 90 bp CTAGAGATTGGGCTGAACTGGTTGAAGGTGGGTAATGGCTCCGACTaGGAAGGCTCTAGCTTGCTTGTGAAACTCCTAGCACTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: LEIGLNWLKVGNGSD*EGSSLLVKLLALSP
Trigger: TGGAGACAGTGCTAGGAGTTTCACAAGCAAGCTAGAGCCTTCCAAGTCGGAGCCATTACCCACCTTCAACCAGTTCAGCCCAATCTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 72 bp TTTGGGGCTGCCTTTAGAACCCTCTTTAGTGGGCCCTaGGGAATCCTTTGTGTGACCAGGCTGATCCTCTTT +
Preference number: 6 (lower is better)
Translates to: FGAAFRTLFSGP*GILCVTRLILF
Trigger: AAAGAGGATCAGCCTGGTCACACAAAGGATTCCTCAGGGCCCACTAAAGAGGGTTCTAAAGGCAGCCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 72 bp TTTTGGGACCCTGGACCCAGAGATGCGGCAGGGAGATaGAGAGTCACTGGTTTTGATCATATTCTCATCCCC +
Preference number: 6 (lower is better)
Translates to: FWDPGPRDAAGR*RVTGFDHILIP
Trigger: GGGGATGAGAATATGATCAAAACCAGTGACTCTTCATCTCCCTGCCGCATCTCTGGGTCCAGGGTCCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 72 bp GGATGTGGCTTTTCAGCAAGGCCAAAGTCAGGTGGATaGCACCACAGTGAATGCACCTGTAGCCCACTTTTC +
Preference number: 6 (lower is better)
Translates to: GCGFSARPKSGG*HHSECTCSPLF
Trigger: GAAAAGTGGGCTACAGGTGCATTCACTGTGGTGTCATCCACCTGACTTTGGCCTTGCTGAAAAGCCACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp GCAGGTCTGAGCCCCGGAATCCATTATGTAGGAGACTaGGAGCAATGTGGTCTTTCTCTGCTTCAAACGACT +
Preference number: 6 (lower is better)
Translates to: AGLSPGIHYVGD*EQCGLSLLQTT
Trigger: AGTCGTTTGAAGCAGAGAAAGACCACATTGCTCCCAGTCTCCTACATAATGGATTCCGGGGCTCAGACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp TCCATACCGGATGAGCCTCACTGGGTCTGGATAAAGTaGCAAGGCTGGAATTACAGAGCTGGCATTGTCCAA +
Preference number: 6 (lower is better)
Translates to: SIPDEPHWVWIK*QGWNYRAGIVQ
Trigger: TTGGACAATGCCAGCTCTGTAATTCCAGCCTTGCCACTTTATCCAGACCCAGTGAGGCTCATCCGGTATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp ACATTTGGTTCCATACCGGATGAGCCTCACTGGGTCTaGATAAAGTGGCAAGGCTGGAATTACAGAGCTGGC +
Preference number: 6 (lower is better)
Translates to: TFGSIPDEPHWV*IKWQGWNYRAG
Trigger: GCCAGCTCTGTAATTCCAGCCTTGCCACTTTATCCAGACCCAGTGAGGCTCATCCGGTATGGAACCAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 72 bp GCTCCTCCACGTTCCGGGGAACACCATGGGTATTCTTaGCATGCTGCATTAACTCTGGTTTCTGCAGAAACA +
Preference number: 6 (lower is better)
Translates to: APPRSGEHHGYS*HAALTLVSAET
Trigger: TGTTTCTGCAGAAACCAGAGTTAATGCAGCATGTCAAGAATACCCATGGTGTTCCCCGGAACGTGGAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CCA 72 bp CTCAGGACATTTGGTTCCATACCGGATGAGCCTCACTaGGTCTGGATAAAGTGGCAAGGCTGGAATTACAGA +
Preference number: 6 (lower is better)
Translates to: LRTFGSIPDEPH*VWIKWQGWNYR
Trigger: TCTGTAATTCCAGCCTTGCCACTTTATCCAGACCCAGTGAGGCTCATCCGGTATGGAACCAAATGTCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 72 bp AGCTCCTCCACGTTCCGGGGAACACCATGGGTATTCTaGACATGCTGCATTAACTCTGGTTTCTGCAGAAAC +
Preference number: 6 (lower is better)
Translates to: SSSTFRGTPWVF*TCCINSGFCRN
Trigger: GTTTCTGCAGAAACCAGAGTTAATGCAGCATGTCAAGAATACCCATGGTGTTCCCCGGAACGTGGAGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 72 bp TCAGAGTGCTTGGACTTTATCCCAAACCCATTATCTTaGACAGGATCCTCAGGCTCTGGGCTAGAGATTGGG +
Preference number: 6 (lower is better)
Translates to: SECLDFIPNPLS*TGSSGSGLEIG
Trigger: CCCAATCTCTAGCCCAGAGCCTGAGGATCCTGTCAAAGATAATGGGTTTGGGATAAAGTCCAAGCACTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS TCA 72 bp GCAAGCTTCTTGGGCTCTCCAATACTGTTGCTAGGGTaGCTATTGAACTCTAAAGCTTCCCCAAAGAACCGA +
Preference number: 6 (lower is better)
Translates to: ASFLGSPILLLG*LLNSKASPKNR
Trigger: TCGGTTCTTTGGGGAAGCTTTAGAGTTCAATAGTCACCCTAGCAACAGTATTGGAGAGCCCAAGAAGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 72 bp AAGGTGGGTAATGGCTCCGACTTGGAAGGCTCTAGCTaGCTTGTGAAACTCCTAGCACTGTCTCCATTTATA +
Preference number: 6 (lower is better)
Translates to: KVGNGSDLEGSS*LVKLLALSPFI
Trigger: TATAAATGGAGACAGTGCTAGGAGTTTCACAAGCAAGCTAGAGCCTTCCAAGTCGGAGCCATTACCCACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 90 bp AACTGGTTGAAGGTGGGTAATGGCTCCGACTTGGAAGGCTCTAGCTaGCTTGTGAAACTCCTAGCACTGTCTCCATTTATAAAAGTAGAA +
Preference number: 6 (lower is better)
Translates to: NWLKVGNGSDLEGSS*LVKLLALSPFIKVE
Trigger: TTCTACTTTTATAAATGGAGACAGTGCTAGGAGTTTCACAAGCAAGCTAGAGCCTTCCAAGTCGGAGCCATTACCCACCTTCAACCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3
CDS CAA 90 bp GAAAACACCCGCCTGTGTCTTGCTGACATTCTGGTAAAAATGTTGTaGAATGTGCCTCTTCTTATTGAAGACCATTTCACAGGAGCACTT +
Preference number: 6 (lower is better)
Translates to: ENTRLCLADILVKML*NVPLLIEDHFTGAL
Trigger: AAGTGCTCCTGTGAAATGGTCTTCAATAAGAAGAGGCACATTCAACAACATTTTTACCAGAATGTCAGCAAGACACAGGCGGGTGTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107353.3