Pregenerated sensors for ZFP59 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078779Ensembl transcript IDs: ENSMUST00000108331.3, ENSMUST00000205701.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGATATCCTGGATTTCATACATGAAACCCGGGCTTGCCTTAAATaGCTGGTAATTCTCCTACCTCATCCTCTCATATTCTGGAATTAC | + |
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Preference number: 1 (lower is better) Translates to: QDILDFIHETRACLK*LVILLPHPLIFWNY Trigger: GTAATTCCAGAATATGAGAGGATGAGGTAGGAGAATTACCAGGCATTTAAGGCAAGCCCGGGTTTCATGTATGAAATCCAGGATATCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR GCA 90 bp | TTTCTTTTCCAAGATATCCTGGATTTCATACATGAAACCCGGGCTTaGCTTAAATGCCTGGTAATTCTCCTACCTCATCCTCTCATATTC | + |
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Preference number: 1 (lower is better) Translates to: FLFQDILDFIHETRA*LKCLVILLPHPLIF Trigger: GAATATGAGAGGATGAGGTAGGAGAATTACCAGGCATTTAAGGCAAGCCCGGGTTTCATGTATGAAATCCAGGATATCTTGGAAAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR CAA 90 bp | GGCATCCAGCTTTTTCTCCTAGACATTAGAGCCACCAGGGCTTTGTaGTTGCTGCCAATGGAACAATGGCAGAGTCAGGTTCTTCATGTA | + |
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Preference number: 2 (lower is better) Translates to: GIQLFLLDIRATRAL*LLPMEQWQSQVLHV Trigger: TACATGAAGAACCTGACTCTGCCATTGTTCCATTGGCAGCAACAACAAAGCCCTGGTGGCTCTAATGTCTAGGAGAAAAAGCTGGATGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTAATTCTCCTACCTCATCCTCTCATATTCTGGAATTACAGGCAAAAGTCAGGCCCCAGCTCCACTTaGAGGTCTTTGCACATTCTT | + |
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Preference number: 2 (lower is better) Translates to: LVILLPHPLIFWNYRQKSGPSST*RSLHIL Trigger: AAGAATGTGCAAAGACCTCCAAGTGGAGCTGGGGCC...TGACTTTTGCCTGTAATTCCAGAATATGAGAGGATGAGGTAGGAGAATTACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGTCCTCACAGTCACAGCATCTCGAGACTTATATGGACCCTCTGATGAGCTTCCACTTGGAGGTCTTTaGACATTCTTTATACTGATA | + |
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Preference number: 2 (lower is better) Translates to: RVLTVTASRDLYGPSDELPLGGL*TFFILI Trigger: TATCAGTATAAAGAATGTGCAAAGACCTCCAAGTGG...AAGCTCATCAGAGGGTCCATATAAGTCTCGAGATGCTGTGACTGTGAGGACTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR-3UTR GCA 90 bp | ATACAGTGGCTTGTCCTCTTTCACATGCACATGACTCCTGGTGATTATGGATTTATGAATTTGCCACTATaGATGAAGGCTGCACGAAGT | + |
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Preference number: 2 (lower is better) Translates to: IQWLVLFHMHMTPGDYGFMNLPL*MKAARS Trigger: ACTTCGTGCAGCCTTCATGCATAGTGGCAAATTCAT...AAATCCATAATCACCAGGAGTCATGTGCATGTGAAAGAGGACAAGCCACTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTAATTCTCCTACCTCATCCTCTCATATTCTGGAATTACAGGCAAAAGTCACTGCCAATGGAACAATaGCAGAGTCAGGTTCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LVILLPHPLIFWNYRQKSLPMEQ*QSQVLH Trigger: ATGAAGAACCTGACTCTGCCATTGTTCCATTGGCAG...TGACTTTTGCCTGTAATTCCAGAATATGAGAGGATGAGGTAGGAGAATTACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGTAATTCTCCTACCTCATCCTCTCATATTCTGGAATTACAGGCAAAAGTCATCTAGACTGTTAGAATaGTGGGAAAAGGTTGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LVILLPHPLIFWNYRQKSSRLLE*WEKVVR Trigger: CCTGACAACCTTTTCCCAGCATTCTAACAGTCTAGA...TGACTTTTGCCTGTAATTCCAGAATATGAGAGGATGAGGTAGGAGAATTACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGTTCTCATTTTATGTGACGTCATGGTCTTCCCAATGTGAGTTCTCTGATAAGATTTTCATACAGTaGCTTGTCCTCTTTCACATG | + |
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Preference number: 2 (lower is better) Translates to: LKFSFYVTSWSSQCEFSDKIFIQ*LVLFHM Trigger: CATGTGAAAGAGGACAAGCCACTGTATGAAAATCTT...ATCAGAGAACTCACATTGGGAAGACCATGACGTCACATAAAATGAGAACTTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR CCA 72 bp | GCCACCAGGGCTTTGTTGTTGCTGCCAATGGAACAATaGCAGAGTCAGGTTCTTCATGTAGGGCCCCTCACA | + |
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Preference number: 3 (lower is better) Translates to: ATRALLLLPMEQ*QSQVLHVGPLT Trigger: TGTGAGGGGCCCTACATGAAGAACCTGACTCTGCCATTGTTCCATTGGCAGCAACAACAAAGCCCTGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR TCA 72 bp | GGCCCCTCACAGTTTAACTATCAGTATTCTGTGTCCTaGCCCTGTAGGGAGGATAGAACAACTTTGTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: GPSQFNYQYSVS*PCREDRTTLFP Trigger: TGGAAACAAAGTTGTTCTATCCTCCCTACAGGGTCAGGACACAGAATACTGATAGTTAAACTGTGAGGGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR GCA 72 bp | CTGATAGGGTGTCCTACCTGTATGAATTTGCCACTATaGATGAAGGCTGCACGAAGTCTAAACATGTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: LIGCPTCMNLPL*MKAARSLNMFP Trigger: TGGGAACATGTTTAGACTTCGTGCAGCCTTCATGCATAGTGGCAAATTCATACAGGTAGGACACCCTATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR GCA 72 bp | CTGGATTTCATACATGAAACCCGGGCTTGCCTTAAATaGCTGGTAATTCTCCTACCTCATCCTCTCATATTC | + |
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Preference number: 3 (lower is better) Translates to: LDFIHETRACLK*LVILLPHPLIF Trigger: GAATATGAGAGGATGAGGTAGGAGAATTACCAGGCATTTAAGGCAAGCCCGGGTTTCATGTATGAAATCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR-3UTR CAA 90 bp | CTTTTCTTTTCCAAGATATCCTGGATTTCATACATGAAACCCGGGCTTGCCTTAAATGCTGGGAAAAGGTaGTCAGGAGACTTCCTAGAT | + |
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Preference number: 3 (lower is better) Translates to: LFFSKISWISYMKPGLALNAGKR*SGDFLD Trigger: ATCTAGGAAGTCTCCTGACAACCTTTTCCCAGCATT...TAAGGCAAGCCCGGGTTTCATGTATGAAATCCAGGATATCTTGGAAAAGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR-3UTR CAA 90 bp | GGCAGATTAAAGTTCTCATTTTATGTGACGTCATGGTCTTCCCAATGTGAGTTCTCCACTTGGAGGTCTTaGCACATTCTTTATACTGAT | + |
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Preference number: 3 (lower is better) Translates to: GRLKFSFYVTSWSSQCEFSTWRS*HILYTD Trigger: ATCAGTATAAAGAATGTGCAAAGACCTCCAAGTGGA...GAACTCACATTGGGAAGACCATGACGTCACATAAAATGAGAACTTTAATCTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR TCA 90 bp | CTGTGTCCTGACCCTGTAGGGAGGATAGAACAACTTTGTTTCCAGTCACGTTTGGGCTTCTCTTCACTATaGCTGCTCTGGTGCCGAGTG | + |
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Preference number: 4 (lower is better) Translates to: LCPDPVGRIEQLCFQSRLGFSSL*LLWCRV Trigger: CACTCGGCACCAGAGCAGTCATAGTGAAGAGAAGCC...CAAACGTGACTGGAAACAAAGTTGTTCTATCCTCCCTACAGGGTCAGGACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR CAA 72 bp | CAGCTTTTTCTCCTAGACATTAGAGCCACCAGGGCTTaGTTGTTGCTGCCAATGGAACAATGGCAGAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: QLFLLDIRATRA*LLLPMEQWQSQ Trigger: CTGACTCTGCCATTGTTCCATTGGCAGCAACAACAAAGCCCTGGTGGCTCTAATGTCTAGGAGAAAAAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR TCA 90 bp | CTTTTCTTTTCCAAGATATCCTGGATTTCATACATGAAACCCGGGCTTGCCTTAAGAGTCTGGCAGGTGTaGGGAGGCACTCCTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LFFSKISWISYMKPGLALRVWQV*GGTPSL Trigger: CAAGGAAGGAGTGCCTCCTCACACCTGCCAGACTCT...TAAGGCAAGCCCGGGTTTCATGTATGAAATCCAGGATATCTTGGAAAAGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR CCA 90 bp | GTTCACCAAATCCCAGGGCAGATTAAAGTTCTCATTTTATGTGACGTCATGGTCATCTGCCTCCAAATCTaGGCTCGGCCTGCCTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: VHQIPGQIKVLILCDVMVICLQI*ARPACF Trigger: GAAACAGGCAGGCCGAGCCCAGATTTGGAGGCAGAT...GACCATGACGTCACATAAAATGAGAACTTTAATCTGCCCTGGGATTTGGTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR TCA 90 bp | CGAGTCCTCACAGTCACAGCATCTCGAGACTTATATGGACCCTCTGATGAGCTTGGTTTCTCATCAGAATaGATTTTCCGATGGTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: RVLTVTASRDLYGPSDELGFSSE*IFRWWN Trigger: GTTCCACCATCGGAAAATTCATTCTGATGAGAAACC...AAGCTCATCAGAGGGTCCATATAAGTCTCGAGATGCTGTGACTGTGAGGACTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR CCA 90 bp | CTTTTCTTTTCCAAGATATCCTGGATTTCATACATGAAACCCGGGCTTGCCTTATGCCTTGTGAGCTGTTaGGGGAGTCTGAAGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LFFSKISWISYMKPGLALCLVSC*GSLKAF Trigger: GAAGGCCTTCAGACTCCCCCAACAGCTCACAAGGCA...TAAGGCAAGCCCGGGTTTCATGTATGAAATCCAGGATATCTTGGAAAAGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| 3UTR CAA 72 bp | TTTCTCCTAGACATTAGAGCCACCAGGGCTTTGTTGTaGCTGCCAATGGAACAATGGCAGAGTCAGGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FLLDIRATRALL*LPMEQWQSQVL Trigger: AAGAACCTGACTCTGCCATTGTTCCATTGGCAGCAACAACAAAGCCCTGGTGGCTCTAATGTCTAGGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR TCA 90 bp | GGCAGATTAAAGTTCTCATTTTATGTGACGTCATGGTCTTCCCAATGTGAGTTCGGTGAGCCAGAACAATaGAGCCCTTCCCACAATCCT | + |
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Preference number: 4 (lower is better) Translates to: GRLKFSFYVTSWSSQCEFGEPEQ*SPSHNP Trigger: AGGATTGTGGGAAGGGCTTCATTGTTCTGGCTCACC...GAACTCACATTGGGAAGACCATGACGTCACATAAAATGAGAACTTTAATCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR GCA 90 bp | GTTCACCAAATCCCAGGGCAGATTAAAGTTCTCATTTTATGTGACGTCATGGTCCCCACATTCCCTGCATaGAAATGCTTTGGCACCTGT | + |
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Preference number: 4 (lower is better) Translates to: VHQIPGQIKVLILCDVMVPTFPA*KCFGTC Trigger: ACAGGTGCCAAAGCATTTGCATGCAGGGAATGTGGG...GACCATGACGTCACATAAAATGAGAACTTTAATCTGCCCTGGGATTTGGTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR TCA 90 bp | CTGGTAATTCTCCTACCTCATCCTCTCATATTCTGGAATTACAGGCAAAAGTCACTTATTTGGGAAGGCTaGCCCACAGAGCTTACACTT | + |
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Preference number: 4 (lower is better) Translates to: LVILLPHPLIFWNYRQKSLIWEG*PTELTL Trigger: AAGTGTAAGCTCTGTGGGTCAGCCTTCCCAAATAAG...TGACTTTTGCCTGTAATTCCAGAATATGAGAGGATGAGGTAGGAGAATTACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR TCA 90 bp | TTCATACAGTGGCTTGTCCTCTTTCACATGCACATGACTCCTGGTGATTATGGATTATGGCTATTAAGTTaGCTGGGAAGAAGGAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: FIQWLVLFHMHMTPGDYGLWLLS*LGRRKA Trigger: GGCTTTCCTTCTTCCCAGTCAACTTAATAGCCATAA...TCCATAATCACCAGGAGTCATGTGCATGTGAAAGAGGACAAGCCACTGTATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR TCA 90 bp | GGCAGATTAAAGTTCTCATTTTATGTGACGTCATGGTCTTCCCAATGTGAGTTCGATTGGATTCACGCTTaGAGGACTTCCCACATACCT | + |
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Preference number: 4 (lower is better) Translates to: GRLKFSFYVTSWSSQCEFDWIHA*RTSHIP Trigger: AGGTATGTGGGAAGTCCTTCAAGCGTGAATCCAATC...GAACTCACATTGGGAAGACCATGACGTCACATAAAATGAGAACTTTAATCTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR TCA 90 bp | CTTTTCTTTTCCAAGATATCCTGGATTTCATACATGAAACCCGGGCTTGCCTTATGCTCTGATGCTGAATaGGATACGCCAGAACAACGA | + |
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Preference number: 4 (lower is better) Translates to: LFFSKISWISYMKPGLALCSDAE*DTPEQR Trigger: TCGTTGTTCTGGCGTATCTCATTCAGCATCAGAGCA...TAAGGCAAGCCCGGGTTTCATGTATGAAATCCAGGATATCTTGGAAAAGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR GCA 90 bp | AGAACTTCTCTGATATACAGGGAACTTAGAATTACTGTAGGCCTTTCCATACTCAATCTGGGCTCGGCCTaGCTGTTTCTTCATTCACAG | + |
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Preference number: 4 (lower is better) Translates to: RTSLIYRELRITVGLSILNLGSA*LFLHSQ Trigger: CTGTGAATGAAGAAACAGGCAGGCCGAGCCCAGATT...GAGTATGGAAAGGCCTACAGTAATTCTAAGTTCCCTGTATATCAGAGAAGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR TCA 90 bp | CTTTTCTTTTCCAAGATATCCTGGATTTCATACATGAAACCCGGGCTTGCCTTATGCCTTCATTATGACTaGAAGGCTTCTCACCACTGT | + |
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Preference number: 4 (lower is better) Translates to: LFFSKISWISYMKPGLALCLHYD*KASHHC Trigger: ACAGTGGTGAGAAGCCTTTCAGTCATAATGAAGGCA...TAAGGCAAGCCCGGGTTTCATGTATGAAATCCAGGATATCTTGGAAAAGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR TCA 90 bp | AGAACTTCTCTGATATACAGGGAACTTAGAATTACTGTAGGCCTTTCCATACTCAGTAGGTTGGGATGTTaGAAAGCCTGTCTGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RTSLIYRELRITVGLSILSRLGC*KACLPS Trigger: TGAAGGCAGACAGGCTTTTCAACATCCCAACCTACT...GAGTATGGAAAGGCCTACAGTAATTCTAAGTTCCCTGTATATCAGAGAAGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR GCA 90 bp | ATACAGTGGCTTGTCCTCTTTCACATGCACATGACTCCTGGTGATTATGGATTTTTCCCTGCATGCAAATaGTTTGGCACCTGTATGAAT | + |
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Preference number: 4 (lower is better) Translates to: IQWLVLFHMHMTPGDYGFFPACK*FGTCMN Trigger: ATTCATACAGGTGCCAAAGCATTTGCATGCAGGGAA...AAATCCATAATCACCAGGAGTCATGTGCATGTGAAAGAGGACAAGCCACTGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR TCA 90 bp | TTCTTTTCCAAGATATCCTGGATTTCATACATGAAACCCGGGCTTGCCTTAAATCCAGAATGGATTTTCTaGTGGCGCACAAAACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FFSKISWISYMKPGLALNPEWIF*WRTKLL Trigger: CAGAAGTTTTGTGCGCCATCAGAAAATCCATTCTGG...ATTTAAGGCAAGCCCGGGTTTCATGTATGAAATCCAGGATATCTTGGAAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR TCA 90 bp | GTTCACCAAATCCCAGGGCAGATTAAAGTTCTCATTTTATGTGACGTCATGGTCCAATCTTCCACACACTaGAAGAGTTTCACATCAGTA | + |
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Preference number: 4 (lower is better) Translates to: VHQIPGQIKVLILCDVMVQSSTH*KSFTSV Trigger: TACTGATGTGAAACTCTTTCAGTGTGTGGAAGATTG...GACCATGACGTCACATAAAATGAGAACTTTAATCTGCCCTGGGATTTGGTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR CCA 90 bp | GGCAGATTAAAGTTCTCATTTTATGTGACGTCATGGTCTTCCCAATGTGAGTTCTGCATGCAAATGCTTTaGCACCTGTATGAATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: GRLKFSFYVTSWSSQCEFCMQML*HLYEWL Trigger: AAGCCATTCATACAGGTGCCAAAGCATTTGCATGCA...GAACTCACATTGGGAAGACCATGACGTCACATAAAATGAGAACTTTAATCTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR TCA 90 bp | TTAAAGTTCTCATTTTATGTGACGTCATGGTCTTCCCAATGTGAGTTCTCTGATATCCCTAAATGTCACTaGCCCACAAACCATGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LKFSFYVTSWSSQCEFSDIPKCH*PTNHVL Trigger: CAAGACATGGTTTGTGGGTCAGTGACATTTAGGGAT...ATCAGAGAACTCACATTGGGAAGACCATGACGTCACATAAAATGAGAACTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR TCA 90 bp | TTAAAGTTCTCATTTTATGTGACGTCATGGTCTTCCCAATGTGAGTTCTCTGATTGTCTGCCTTCATTATaGCTGAAAGGCTTCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: LKFSFYVTSWSSQCEFSDCLPSL*LKGFSP Trigger: TGGTGAGAAGCCTTTCAGTCATAATGAAGGCAGACA...ATCAGAGAACTCACATTGGGAAGACCATGACGTCACATAAAATGAGAACTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR CCA 90 bp | ATACAGTGGCTTGTCCTCTTTCACATGCACATGACTCCTGGTGATTATGGATTTAGATGTTTATTGAGTTaGGATCTACATCTGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: IQWLVLFHMHMTPGDYGFRCLLS*DLHLKA Trigger: AGCCTTCAGATGTAGATCCCAACTCAATAAACATCT...AAATCCATAATCACCAGGAGTCATGTGCATGTGAAAGAGGACAAGCCACTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR GCA 90 bp | TTAAAGTTCTCATTTTATGTGACGTCATGGTCTTCCCAATGTGAGTTCTCTGATTTTGACGAAAGCATTTaGCACATTCCTTGCACTGAT | + |
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Preference number: 4 (lower is better) Translates to: LKFSFYVTSWSSQCEFSDFDESI*HIPCTD Trigger: ATCAGTGCAAGGAATGTGGCAAATGCTTTCGTCAAA...ATCAGAGAACTCACATTGGGAAGACCATGACGTCACATAAAATGAGAACTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR CCA 90 bp | GGCAGATTAAAGTTCTCATTTTATGTGACGTCATGGTCTTCCCAATGTGAGTTCAGATGCTTATTAAGTTaGTACTTATTTGGGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: GRLKFSFYVTSWSSQCEFRCLLS*YLFGKA Trigger: AGCCTTCCCAAATAAGTACCAACTTAATAAGCATCT...GAACTCACATTGGGAAGACCATGACGTCACATAAAATGAGAACTTTAATCTGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR CAA 90 bp | GTTCACCAAATCCCAGGGCAGATTAAAGTTCTCATTTTATGTGACGTCATGGTCCCACAGAGCTTACACTaGAAAGGATTCTCTTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: VHQIPGQIKVLILCDVMVPQSLH*KGFSSV Trigger: CACTGAAGAGAATCCTTTCAAGTGTAAGCTCTGTGG...GACCATGACGTCACATAAAATGAGAACTTTAATCTGCCCTGGGATTTGGTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR CAA 90 bp | GGCAGATTAAAGTTCTCATTTTATGTGACGTCATGGTCTTCCCAATGTGAGTTCCTTGTTAGTAATCTGTaGGCCAGCATCACTCTGACA | + |
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Preference number: 5 (lower is better) Translates to: GRLKFSFYVTSWSSQCEFLVSNL*ASITLT Trigger: TGTCAGAGTGATGCTGGCCAACAGATTACTAACAAG...GAACTCACATTGGGAAGACCATGACGTCACATAAAATGAGAACTTTAATCTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR CAA 90 bp | GTTCACCAAATCCCAGGGCAGATTAAAGTTCTCATTTTATGTGACGTCATGGTCGAGATGCTTATTAAGTaGGTACTTATTTGGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: VHQIPGQIKVLILCDVMVEMLIK*VLIWEG Trigger: GCCTTCCCAAATAAGTACCAACTTAATAAGCATCTC...GACCATGACGTCACATAAAATGAGAACTTTAATCTGCCCTGGGATTTGGTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR CAA 90 bp | CTTTTCTTTTCCAAGATATCCTGGATTTCATACATGAAACCCGGGCTTGCCTTAGCAGTTCTAAATTTCTaGCCACATTCCTCACATTCA | + |
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Preference number: 5 (lower is better) Translates to: LFFSKISWISYMKPGLALAVLNF*PHSSHS Trigger: TGAATGTGAGGAATGTGGCAAGAAATTTAGAACTGC...TAAGGCAAGCCCGGGTTTCATGTATGAAATCCAGGATATCTTGGAAAAGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR CAA 90 bp | CTGGTAATTCTCCTACCTCATCCTCTCATATTCTGGAATTACAGGCAAAAGTCATTTATGGCTATTAAGTaGACTGGGAAGAAGGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: LVILLPHPLIFWNYRQKSFMAIK*TGKKES Trigger: GCTTTCCTTCTTCCCAGTCAACTTAATAGCCATAAA...TGACTTTTGCCTGTAATTCCAGAATATGAGAGGATGAGGTAGGAGAATTACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTTCCAAGATATCCTGGATTTCATACATGAAACCCGGGCTTGCCTTAAATCAGATGTTTATTGAGTaGGGATCTACATCTGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: FFSKISWISYMKPGLALNQMFIE*GSTSEG Trigger: GCCTTCAGATGTAGATCCCAACTCAATAAACATCTG...ATTTAAGGCAAGCCCGGGTTTCATGTATGAAATCCAGGATATCTTGGAAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205701.2 |
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| CDS TCA 72 bp | CCACATTCCCTGCATGCAAATGCTTTGGCACCTGTATaGATGGCTTTAGGGTACTTGAGTAGGTTGGGATGT | + |
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Preference number: 6 (lower is better) Translates to: PHSLHANALAPV*MALGYLSRLGC Trigger: ACATCCCAACCTACTCAAGTACCCTAAAGCCATTCATACAGGTGCCAAAGCATTTGCATGCAGGGAATGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108331.3 ENSMUST00000205701.2 |
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