Pregenerated sensors for ZFP583 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030443Ensembl transcript IDs: ENSMUST00000062765.14, ENSMUST00000108560.8, ENSMUST00000165705.8
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTAGGGTACTTTAAGAACTGTGCTTTTTACCTACAAACTTGGATATTGGTAAGCAGTTTGGCTGAAGTGTaGAAACTGACAAGAGGCATG | + |
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Preference number: 2 (lower is better) Translates to: LGYFKNCAFYLQTWILVSSLAEV*KLTRGM Trigger: CATGCCTCTTGTCAGTTTCCACACTTCAGCCAAACT...GCTTACCAATATCCAAGTTTGTAGGTAAAAAGCACAGTTCTTAAAGTACCCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| 3UTR-3UTR CCA 90 bp | TTAGGGTACTTTAAGAACTGTGCTTTTTACCTACAAACTTGGATATTGGTAAGCAATAAATGGTTCCAATaGGTCAGGTTTGGGTCATAT | + |
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Preference number: 2 (lower is better) Translates to: LGYFKNCAFYLQTWILVSNKWFQ*VRFGSY Trigger: ATATGACCCAAACCTGACCCATTGGAACCATTTATT...GCTTACCAATATCCAAGTTTGTAGGTAAAAAGCACAGTTCTTAAAGTACCCTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| 3UTR TCA 72 bp | ATTCGTTTTTGTAAAGTTTGGCTGAAGTGTGGAAACTaGCAAGAGGCATGGGTGAAGGGTGAAAACACTAGA | + |
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Preference number: 3 (lower is better) Translates to: IRFCKVWLKCGN*QEAWVKGENTR Trigger: TCTAGTGTTTTCACCCTTCACCCATGCCTCTTGTCAGTTTCCACACTTCAGCCAAACTTTACAAAAACGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR TCA 90 bp | GGGCCAGGTGGCCTGTTAGGGTACTTTAAGAACTGTGCTTTTTACCTACAAACTGATGTGCACGCTGCCTaGACGATTTCCTGCAATCTT | + |
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Preference number: 4 (lower is better) Translates to: GPGGLLGYFKNCAFYLQTDVHAA*TISCNL Trigger: AAGATTGCAGGAAATCGTTCAGGCAGCGTGCACATC...AGTTTGTAGGTAAAAAGCACAGTTCTTAAAGTACCCTAACAGGCCACCTGGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR TCA 90 bp | GGGCCAGGTGGCCTGTTAGGGTACTTTAAGAACTGTGCTTTTTACCTACAAACTAGAGTTCTTGGCAACTaGCTTGACATAGAGGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: GPGGLLGYFKNCAFYLQTRVLGN*LDIEGD Trigger: ATCACCCTCTATGTCAAGTCAGTTGCCAAGAACTCT...AGTTTGTAGGTAAAAAGCACAGTTCTTAAAGTACCCTAACAGGCCACCTGGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR GCA 90 bp | AAAAACATTTCACTCTTCCACACACAACAGAGTAACACAAAGAAGACAAGGATGGCAAGATGTGCACGCTaGCTGAACGATTTCCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: KNISLFHTQQSNTKKTRMARCAR*LNDFLQ Trigger: TTGCAGGAAATCGTTCAGGCAGCGTGCACATCTTGC...CATCCTTGTCTTCTTTGTGTTACTCTGTTGTGTGTGGAAGAGTGAAATGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR GCA 90 bp | ATTTCACTCTTCCACACACAACAGAGTAACACAAAGAAGACAAGGATGATACAAAGGACATGTGTCTCTTaGTCCCTTCTTCTGCACCAT | + |
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Preference number: 4 (lower is better) Translates to: ISLFHTQQSNTKKTRMIQRTCVS*SLLLHH Trigger: ATGGTGCAGAAGAAGGGAGCAAGAGACACATGTCCT...TTGTATCATCCTTGTCTTCTTTGTGTTACTCTGTTGTGTGTGGAAGAGTGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR TCA 90 bp | TTAGGGTACTTTAAGAACTGTGCTTTTTACCTACAAACTTGGATATTGGTAAGCAACAGGAATTCCCAGTaGCACCAGGCTCTTATAGTT | + |
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Preference number: 4 (lower is better) Translates to: LGYFKNCAFYLQTWILVSNRNSQ*HQALIV Trigger: AACTATAAGAGCCTGGTGTCACTGGGAATTCCTGTT...GCTTACCAATATCCAAGTTTGTAGGTAAAAAGCACAGTTCTTAAAGTACCCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR CCA 90 bp | AAAAACATTTCACTCTTCCACACACAACAGAGTAACACAAAGAAGACAAGGATGAGGCTGGAACTAAAATaGCTTCTTCCCATTGTTAGA | + |
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Preference number: 4 (lower is better) Translates to: KNISLFHTQQSNTKKTRMRLELK*LLPIVR Trigger: TCTAACAATGGGAAGAAGCCATTTTAGTTCCAGCCT...CATCCTTGTCTTCTTTGTGTTACTCTGTTGTGTGTGGAAGAGTGAAATGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR CCA 90 bp | AAAAACATTTCACTCTTCCACACACAACAGAGTAACACAAAGAAGACAAGGATGGCAAGGCCTGCATTTTaGCTAAATGTTTTCCTACAT | + |
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Preference number: 4 (lower is better) Translates to: KNISLFHTQQSNTKKTRMARPAF*LNVFLH Trigger: ATGTAGGAAAACATTTAGCCAAAATGCAGGCCTTGC...CATCCTTGTCTTCTTTGTGTTACTCTGTTGTGTGTGGAAGAGTGAAATGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR TCA 90 bp | TTAGGGTACTTTAAGAACTGTGCTTTTTACCTACAAACTTGGATATTGGTAAGCGTCCCAACCTGTTTTTaGACCAGTCTTCATTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LGYFKNCAFYLQTWILVSVPTCF*TSLHFH Trigger: ATGAAAATGAAGACTGGTTCAAAAACAGGTTGGGAC...GCTTACCAATATCCAAGTTTGTAGGTAAAAAGCACAGTTCTTAAAGTACCCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR TCA 90 bp | AAAAACATTTCACTCTTCCACACACAACAGAGTAACACAAAGAAGACAAGGATGTTTTGTGGCTCACTCTaGTCTATTCTTTCTTTGGTA | + |
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Preference number: 4 (lower is better) Translates to: KNISLFHTQQSNTKKTRMFCGSL*SILSLV Trigger: TACCAAAGAAAGAATAGATCAGAGTGAGCCACAAAA...CATCCTTGTCTTCTTTGTGTTACTCTGTTGTGTGTGGAAGAGTGAAATGTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR GCA 90 bp | TTAGGGTACTTTAAGAACTGTGCTTTTTACCTACAAACTTGGATATTGGTAAGCCCTTTGAATACATACTaGCAATCAGGACATGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: LGYFKNCAFYLQTWILVSPLNTY*QSGHVS Trigger: AGACACATGTCCTGATTGGCAGTATGTATTCAAAGG...GCTTACCAATATCCAAGTTTGTAGGTAAAAAGCACAGTTCTTAAAGTACCCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR GCA 90 bp | AAAAACATTTCACTCTTCCACACACAACAGAGTAACACAAAGAAGACAAGGATGACCTGGACCTTCTTATaGTTCATTTCAACAGACTTT | + |
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Preference number: 4 (lower is better) Translates to: KNISLFHTQQSNTKKTRMTWTFL*FISTDF Trigger: AAAGTCTGTTGAAATGAAGCATAAGAAGGTCCAGGT...CATCCTTGTCTTCTTTGTGTTACTCTGTTGTGTGTGGAAGAGTGAAATGTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR GCA 90 bp | TTAGGGTACTTTAAGAACTGTGCTTTTTACCTACAAACTTGGATATTGGTAAGCATGTTGAGAAAGGTGTaGATACTGGCTGAAAGACTT | + |
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Preference number: 4 (lower is better) Translates to: LGYFKNCAFYLQTWILVSMLRKV*ILAERL Trigger: AAGTCTTTCAGCCAGTATGCACACCTTTCTCAACAT...GCTTACCAATATCCAAGTTTGTAGGTAAAAAGCACAGTTCTTAAAGTACCCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR GCA 90 bp | TTAGGGTACTTTAAGAACTGTGCTTTTTACCTACAAACTTGGATATTGGTAAGCATGTTGAGCAAGGCCTaGATTTTGGCTAAATGTTTT | + |
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Preference number: 4 (lower is better) Translates to: LGYFKNCAFYLQTWILVSMLSKA*ILAKCF Trigger: AAAACATTTAGCCAAAATGCAGGCCTTGCTCAACAT...GCTTACCAATATCCAAGTTTGTAGGTAAAAAGCACAGTTCTTAAAGTACCCTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR CCA 90 bp | TTAGGGTACTTTAAGAACTGTGCTTTTTACCTACAAACTTGGATATTGGTAAGCGTAACTTCTCTTTTGTaGCTCACTCTGATCTATTCT | + |
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Preference number: 4 (lower is better) Translates to: LGYFKNCAFYLQTWILVSVTSLL*LTLIYS Trigger: AGAATAGATCAGAGTGAGCCACAAAAGAGAAGTTAC...GCTTACCAATATCCAAGTTTGTAGGTAAAAAGCACAGTTCTTAAAGTACCCTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR CCA 90 bp | TTAGGGTACTTTAAGAACTGTGCTTTTTACCTACAAACTTGGATATTGGTAAGCATTCTCTTTTCTACCTaGACCTTCTTATGCTTCATT | + |
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Preference number: 4 (lower is better) Translates to: LGYFKNCAFYLQTWILVSILFST*TFLCFI Trigger: AATGAAGCATAAGAAGGTCCAGGTAGAAAAGAGAAT...GCTTACCAATATCCAAGTTTGTAGGTAAAAAGCACAGTTCTTAAAGTACCCTAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR CAA 90 bp | GGGCCAGGTGGCCTGTTAGGGTACTTTAAGAACTGTGCTTTTTACCTACAAACTAGCAAGGCCTGCATTTaGGCTAAATGTTTTCCTACA | + |
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Preference number: 5 (lower is better) Translates to: GPGGLLGYFKNCAFYLQTSKACI*AKCFPT Trigger: TGTAGGAAAACATTTAGCCAAAATGCAGGCCTTGCT...AGTTTGTAGGTAAAAAGCACAGTTCTTAAAGTACCCTAACAGGCCACCTGGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR CAA 90 bp | TTAGGGTACTTTAAGAACTGTGCTTTTTACCTACAAACTTGGATATTGGTAAGCCAGGACATGTGTCTCTaGCTCCCTTCTTCTGCACCA | + |
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Preference number: 5 (lower is better) Translates to: LGYFKNCAFYLQTWILVSQDMCL*LPSSAP Trigger: TGGTGCAGAAGAAGGGAGCAAGAGACACATGTCCTG...GCTTACCAATATCCAAGTTTGTAGGTAAAAAGCACAGTTCTTAAAGTACCCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR CAA 90 bp | AAAAACATTTCACTCTTCCACACACAACAGAGTAACACAAAGAAGACAAGGATGGTGGCACATCTAGTATaGCATTCTGATGGACGGCTT | + |
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Preference number: 5 (lower is better) Translates to: KNISLFHTQQSNTKKTRMVAHLV*HSDGRL Trigger: AAGCCGTCCATCAGAATGCAATACTAGATGTGCCAC...CATCCTTGTCTTCTTTGTGTTACTCTGTTGTGTGTGGAAGAGTGAAATGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR CAA 90 bp | ATTTCACTCTTCCACACACAACAGAGTAACACAAAGAAGACAAGGATGATACAAATGAGTGATGAACAATaGATGGGAATGCACCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: ISLFHTQQSNTKKTRMIQMSDEQ*MGMHLL Trigger: CAGGAGGTGCATTCCCATCAATTGTTCATCACTCAT...TTGTATCATCCTTGTCTTCTTTGTGTTACTCTGTTGTGTGTGGAAGAGTGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR CAA 90 bp | AAAAACATTTCACTCTTCCACACACAACAGAGTAACACAAAGAAGACAAGGATGCGTCCCAACCTGTTTTaGAACCAGTCTTCATTTTCA | + |
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Preference number: 5 (lower is better) Translates to: KNISLFHTQQSNTKKTRMRPNLF*NQSSFS Trigger: TGAAAATGAAGACTGGTTCAAAAACAGGTTGGGACG...CATCCTTGTCTTCTTTGTGTTACTCTGTTGTGTGTGGAAGAGTGAAATGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS-3UTR CAA 90 bp | TTAGGGTACTTTAAGAACTGTGCTTTTTACCTACAAACTTGGATATTGGTAAGCCCGGTAACTTCTCTTTaGTGGCTCACTCTGATCTAT | + |
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Preference number: 5 (lower is better) Translates to: LGYFKNCAFYLQTWILVSPVTSL*WLTLIY Trigger: ATAGATCAGAGTGAGCCACAAAAGAGAAGTTACCGG...GCTTACCAATATCCAAGTTTGTAGGTAAAAAGCACAGTTCTTAAAGTACCCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062765.14 |
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| CDS CAA 90 bp | CCCCCTAATTTCACTTTCAGGGACTTCTTTATGAGTGATGAACAATaGATGGGAATGCACCTCCTGACGTCCCAACCTGTTTTTGAACCA | + |
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Preference number: 6 (lower is better) Translates to: PPNFTFRDFFMSDEQ*MGMHLLTSQPVFEP Trigger: TGGTTCAAAAACAGGTTGGGACGTCAGGAGGTGCATTCCCATCAATTGTTCATCACTCATAAAGAAGTCCCTGAAAGTGAAATTAGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000062765.14 ENSMUST00000108560.8 ENSMUST00000165705.8 |
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| CDS GCA 72 bp | TGCTTTGATATAAATTCTGTGCCTTTGAATACATACTaGCAATCAGGACATGTGTCTCTTGCTCCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: CFDINSVPLNTY*QSGHVSLAPFF Trigger: GAAGAAGGGAGCAAGAGACACATGTCCTGATTGGCAGTATGTATTCAAAGGCACAGAATTTATATCAAAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062765.14 ENSMUST00000108560.8 ENSMUST00000165705.8 |
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| CDS CAA 90 bp | CTTCTTATGCTTCATTTCAACAGACTTTTTCCGGTAACTTCTCTTTaGTGGCTCACTCTGATCTATTCTTTCTTTGGTAGAGGAACATTG | + |
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Preference number: 6 (lower is better) Translates to: LLMLHFNRLFPVTSL*WLTLIYSFFGRGTL Trigger: CAATGTTCCTCTACCAAAGAAAGAATAGATCAGAGTGAGCCACAAAAGAGAAGTTACCGGAAAAAGTCTGTTGAAATGAAGCATAAGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062765.14 ENSMUST00000108560.8 ENSMUST00000165705.8 |
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