Pregenerated sensors for ZFP579 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051550Ensembl transcript IDs: ENSMUST00000108572.2, ENSMUST00000162502.2, ENSMUST00000162731.2
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCAAAGGAGAAGACGAATaGTCCAGGCTTCAGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SSVCNRDGQAGTNPAVSIKGEDE*SRLQGQ Trigger: CTGCCCCTGAAGCCTGGATCATTCGTCTTCTCCTTT...GATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| 3UTR-3UTR CCA 90 bp | TCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACCAGTCTCTATCCTTCTaGCCAAGTGTCCTCCGCCTT | + |
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Preference number: 2 (lower is better) Translates to: SHLFTETEEREQTFRAGNQSLSF*PSVLRL Trigger: AAGGCGGAGGACACTTGGCCAGAAGGATAGAGACTG...GTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| 3UTR-3UTR TCA 90 bp | AACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAGACACGTGTTGGGGTaGGAAGTTCCTAACCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: NSHLFTETEEREQTFRAGRHVLG*EVPNQH Trigger: ATGCTGGTTAGGAACTTCTCACCCCAACACGTGTCT...CCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCGCAGTTCCAAAGAGGTaGTGGTGTCCAGTGTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: HLFTETEEREQTFRAGNSAVPKR*WCPVFV Trigger: TACAAACACTGGACACCATCACCTCTTTGGAACTGC...GGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| 3UTR-3UTR TCA 90 bp | TCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACGCAGTTCCAAAGAGGTaGTGGTGTCCAGTGTTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: SHLFTETEEREQTFRAGNAVPKR*WCPVFV Trigger: TACAAACACTGGACACCATCACCTCTTTGGAACTGC...GTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| 3UTR CCA 72 bp | GGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTaGCCAAGTGTCCTCCGCCTTGCCCTGCCTTACTTA | + |
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Preference number: 3 (lower is better) Translates to: GRLGRTQQSLSF*PSVLRLALPYL Trigger: TAAGTAAGGCAGGGCAAGGCGGAGGACACTTGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| 3UTR GCA 72 bp | GCAGTCTCTATCCTTCTGGCCAAGTGTCCTCCGCCTTaGCCTGCCTTACTTAAGACACGTGTTGGGGTGAGA | + |
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Preference number: 3 (lower is better) Translates to: AVSILLAKCPPP*PALLKTRVGVR Trigger: TCTCACCCCAACACGTGTCTTAAGTAAGGCAGGGCAAGGCGGAGGACACTTGGCCAGAAGGATAGAGACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR GCA 90 bp | CAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCCAGGGTCTGGCATCGCGGGCACGGATaGGGGGCGGGACCCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRQRNGSRPFALGTPRVWHRGHG*GAGPPA Trigger: TGCTGGGGGTCCCGCCCCGCATCCGTGCCCGCGATG...CCAGACCCTGGGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | CAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCCAGGGTCTGGGGCCGGAGACCCGAGTaGCTCAGCCGGTGTCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRQRNGSRPFALGTPRVWGRRPE*LSRCRD Trigger: GTCTCGACACCGGCTGAGCCACTCGGGTCTCCGGCC...CCAGACCCTGGGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR TCA 90 bp | CAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCCAGGGTCTGGGAGTGGACTAGCCGGTaGCGCGATAGGGACCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: QRQRNGSRPFALGTPRVWEWTSR*RDRDQG Trigger: GCCCTGGTCCCTATCGCGTCACCGGCTAGTCCACTC...CCAGACCCTGGGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR GCA 90 bp | GTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCACATCGCGGGCACGGATaGGGGGCGGGACCCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VIGMGRLGRTQQSLSFWPHRGHG*GAGPPA Trigger: TGCTGGGGGTCCCGCCCCGCATCCGTGCCCGCGATG...TGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR GCA 90 bp | CAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCCAGGGTCTGGGGGACTGGGGTGGTGTaGCAGGTGAGGGAGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: QRQRNGSRPFALGTPRVWGTGVV*QVREAL Trigger: AAGAGCCTCCCTCACCTGGCACACCACCCCAGTCCC...CCAGACCCTGGGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | GTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCACTCCGGGAAGGTGCGTaGGCAGGCAGCGCAGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: VIGMGRLGRTQQSLSFWPLREGA*AGSAAQ Trigger: CTGCGCTGCGCTGCCTGCCCACGCACCTTCCCGGAG...TGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | CTTCAGCTTCCCTCTTCCTTACTGCAAACCGGGAGCGCAATTGGAAGGGCGGAGGGAGCCGGCGGGGACTaGGGTGGTGTGCCAGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LQLPSSLLQTGSAIGRAEGAGGD*GGVPGE Trigger: CTCACCTGGCACACCACCCCAGTCCCCGCCGGCTCC...CTCCGCCCTTCCAATTGCGCTCCCGGTTTGCAGTAAGGAAGAGGGAAGCTGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR TCA 90 bp | GGCAGTTCCAAAGAGGTGATGGTGTCCAGTGTTTGTAATAGGGATGGGCAGGCTCGGCCACGGTCACGGTaGGGTGGGCTGCCCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: GSSKEVMVSSVCNRDGQARPRSR*GGLPWA Trigger: CGCCCAGGGCAGCCCACCTCACCGTGACCGTGGCCG...AGCCTGCCCATCCCTATTACAAACACTGGACACCATCACCTCTTTGGAACTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR TCA 90 bp | CACGAACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCCGGCCACGGTCACGGTaGGGTGGGCTGCCCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HELTFIHRDRGTGADLSRRPRSR*GGLPWA Trigger: CGCCCAGGGCAGCCCACCTCACCGTGACCGTGGCCG...GCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTTCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR GCA 90 bp | CAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCCAGGGTCTGGTTCACCCCCTTCCGATaGACCCCCACATTCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QRQRNGSRPFALGTPRVWFTPFR*TPTFCP Trigger: GGGGCAGAATGTGGGGGTGCATCGGAAGGGGGTGAA...CCAGACCCTGGGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | TTCAGCTTCCCTCTTCCTTACTGCAAACCGGGAGCGCAATTGGAAGGGCGGAGGGGCCGGAGACCCGAGTaGCTCAGCCGGTGTCGAGAC | + |
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Preference number: 4 (lower is better) Translates to: FSFPLPYCKPGAQLEGRRGRRPE*LSRCRD Trigger: GTCTCGACACCGGCTGAGCCACTCGGGTCTCCGGCC...CCTCCGCCCTTCCAATTGCGCTCCCGGTTTGCAGTAAGGAAGAGGGAAGCTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | CAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCCAGGGTCTGGGCCTGCGGAAAGCTTTaGGGCACAGAGGGCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QRQRNGSRPFALGTPRVWACGKL*GTEGRH Trigger: ATGCCTGCCCTCTGTGCCCCAAAGCTTTCCGCAGGC...CCAGACCCTGGGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | TTCAGCTTCCCTCTTCCTTACTGCAAACCGGGAGCGCAATTGGAAGGGCGGAGGCCGTGGCCACGAAGGTaGCGGGAAAGGTGGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSFPLPYCKPGAQLEGRRPWPRR*RERWAG Trigger: GCCTGCCCACCTTTCCCGCCACCTTCGTGGCCACGG...CCTCCGCCCTTCCAATTGCGCTCCCGGTTTGCAGTAAGGAAGAGGGAAGCTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | TCCAAAGAGGTGATGGTGTCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGGGGGGCTGGGGCCCGTaGCCACGAAGGTGGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKEVMVSSVCNRDGQAGTGGWGP*PRRWRE Trigger: TTCCCGCCACCTTCGTGGCCACGGGCCCCAGCCCCC...CGTCCCAGCCTGCCCATCCCTATTACAAACACTGGACACCATCACCTCTTTGGA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | CCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCGCGCCTGAGCTGGGCTaGCTCCGGGAAGGTGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: PVFVIGMGRLGRTQQSLSAPELG*LREGAW Trigger: CCACGCACCTTCCCGGAGCCAGCCCAGCTCAGGCGC...GGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | AATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCAAGCGCCGGAGGCCGGGCTaGGGTGGCATCTCCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: NRDGQAGTNPAVSILLAKRRRPG*GGISSI Trigger: AATGGAGGAGATGCCACCCCAGCCCGGCCTCCGGCG...CTTGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | CTTCAGCTTCCCTCTTCCTTACTGCAAACCGGGAGCGCAATTGGAAGGGCGGAGCGCCGGAGGCCGGGCTaGGGTGGCATCTCCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: LQLPSSLLQTGSAIGRAERRRPG*GGISSI Trigger: AATGGAGGAGATGCCACCCCAGCCCGGCCTCCGGCG...CTCCGCCCTTCCAATTGCGCTCCCGGTTTGCAGTAAGGAAGAGGGAAGCTGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | AATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCAAGGCGAGAGAAGCGGCGTaGGCATCGCGGGCACGGATG | + |
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Preference number: 4 (lower is better) Translates to: NRDGQAGTNPAVSILLAKAREAA*ASRARM Trigger: CATCCGTGCCCGCGATGCCCACGCCGCTTCTCTCGC...CTTGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | CAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCCAGGGTCTGGTGTGAGGCCTGGGTCTaGAGTTCCTGCAGCGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QRQRNGSRPFALGTPRVWCEAWV*SSCSAA Trigger: TGCAGCGCTGCAGGAACTCCAGACCCAGGCCTCACA...CCAGACCCTGGGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR TCA 90 bp | TCCAAAGAGGTGATGGTGTCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGTGGCAGCGCACGCACTaGAAAGGGCGCGCCCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: SKEVMVSSVCNRDGQAGTWQRTH*KGRAPE Trigger: CTCCGGGGCGCGCCCTTTTCAGTGCGTGCGCTGCCA...CGTCCCAGCCTGCCCATCCCTATTACAAACACTGGACACCATCACCTCTTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR TCA 90 bp | AATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCAAGAGGCTGGGGCGACTGTaGGGCCTGGGTCTGGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: NRDGQAGTNPAVSILLAKRLGRL*GLGLEF Trigger: GAACTCCAGACCCAGGCCTCACAGTCGCCCCAGCCT...CTTGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | ACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAGGGGGCTGGGGCCCGTaGCCACGAAGGTGGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: THIYSQRQRNGSRPFALGGGWGP*PRRWRE Trigger: TTCCCGCCACCTTCGTGGCCACGGGCCCCAGCCCCC...TCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | CATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCCTCCGGGAAGGTGCGTaGGCAGGCAGCGCAGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: HLFTETEEREQTFRAGNSLREGA*AGSAAQ Trigger: CTGCGCTGCGCTGCCTGCCCACGCACCTTCCCGGAG...GGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | TTCAGCTTCCCTCTTCCTTACTGCAAACCGGGAGCGCAATTGGAAGGGCGGAGGGGGCGCAGACACGGGTaGGCTTTGAGCTCCCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: FSFPLPYCKPGAQLEGRRGRRHG*ALSSPL Trigger: CAAGGGGGAGCTCAAAGCCCACCCGTGTCTGCGCCC...CCTCCGCCCTTCCAATTGCGCTCCCGGTTTGCAGTAAGGAAGAGGGAAGCTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | CCTCTTCTTCAGCTTCCCTCTTCCTTACTGCAAACCGGGAGCGCAATTGGAAGGTCCAGCTCGGCGCGGTaGCAGCGTTGGTGGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PLLQLPSSLLQTGSAIGRSSSAR*QRWWRR Trigger: CCTGCGCCACCAACGCTGCCACCGCGCCGAGCTGGA...CCTTCCAATTGCGCTCCCGGTTTGCAGTAAGGAAGAGGGAAGCTGAAGAAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR TCA 90 bp | TGTCCTCCGCCTTGCCCTGCCTTACTTAAGACACGTGTTGGGGTGAGAAGTTCCGACACGGGTGGGCTTTaGGCTCCCCCTTGGTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: CPPPCPALLKTRVGVRSSDTGGL*APPWWR Trigger: TCGCCACCAAGGGGGAGCTCAAAGCCCACCCGTGTC...GGAACTTCTCACCCCAACACGTGTCTTAAGTAAGGCAGGGCAAGGCGGAGGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR TCA 90 bp | ACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACGGGGCCAGCAGGCTaGGTGGACCATGGACGCGGC | + |
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Preference number: 4 (lower is better) Translates to: THIYSQRQRNGSRPFALGTGPAG*VDHGRG Trigger: GCCGCGTCCATGGTCCACTCAGCCTGCTGGCCCCGT...TCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR TCA 90 bp | AACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGACGGGGCCAGCAGGCTaGGTGGACCATGGACGCGGC | + |
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Preference number: 4 (lower is better) Translates to: NSHLFTETEEREQTFRAGTGPAG*VDHGRG Trigger: GCCGCGTCCATGGTCCACTCAGCCTGCTGGCCCCGT...CCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR TCA 90 bp | AACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGTGGCAGCGCACGCACTaGAAAGGGCGCGCCCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: NSHLFTETEEREQTFRAGWQRTH*KGRAPE Trigger: CTCCGGGGCGCGCCCTTTTCAGTGCGTGCGCTGCCA...CCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR TCA 90 bp | GTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCAGGTCCGCCAGTCGCTTaGATTCCCTCTGGCAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: VIGMGRLGRTQQSLSFWPGPPVA*IPSGSA Trigger: TGCGCTGCCAGAGGGAATTCAAGCGACTGGCGGACC...TGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR GCA 90 bp | TGTCCTCCGCCTTGCCCTGCCTTACTTAAGACACGTGTTGGGGTGAGAAGTTCCACCTCGCTACCTGCGTaGTCTTGGGCCAGGTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: CPPPCPALLKTRVGVRSSTSLPA*SWARWR Trigger: GCGCCACCTGGCCCAAGAGCACGCAGGTAGCGAGGT...GGAACTTCTCACCCCAACACGTGTCTTAAGTAAGGCAGGGCAAGGCGGAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | TCCAAAGAGGTGATGGTGTCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGCCGTGGCCACGAAGGTaGCGGGAAAGGTGGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SKEVMVSSVCNRDGQAGTPWPRR*RERWAG Trigger: GCCTGCCCACCTTTCCCGCCACCTTCGTGGCCACGG...CGTCCCAGCCTGCCCATCCCTATTACAAACACTGGACACCATCACCTCTTTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | ACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAGCGCCTGAGCTGGGCTaGCTCCGGGAAGGTGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: THIYSQRQRNGSRPFALGAPELG*LREGAW Trigger: CCACGCACCTTCCCGGAGCCAGCCCAGCTCAGGCGC...TCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | AATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCAAGCCTGCGGACCCCAACTaGCCTCAGGCTCCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NRDGQAGTNPAVSILLAKPADPN*PQAPPS Trigger: TGAAGGAGGAGCCTGAGGCCAGTTGGGGTCCGCAGG...CTTGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | GTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCACCTGCGGACCCCAACTaGCCTCAGGCTCCTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VIGMGRLGRTQQSLSFWPPADPN*PQAPPS Trigger: TGAAGGAGGAGCCTGAGGCCAGTTGGGGTCCGCAGG...TGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | CCTCTTCTTCAGCTTCCCTCTTCCTTACTGCAAACCGGGAGCGCAATTGGAAGGAACACTGGTGTCGCTTaGGGCGGGGCGGGGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PLLQLPSSLLQTGSAIGRNTGVA*GGAGVL Trigger: GAGGACCCCCGCCCCGCCCCAAGCGACACCAGTGTT...CCTTCCAATTGCGCTCCCGGTTTGCAGTAAGGAAGAGGGAAGCTGAAGAAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | TCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCAGGACACCAGAAACGTaGCTCCCCCGCCGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSVCNRDGQAGTNPAVSIRTPET*LPRRRP Trigger: CGGCCTCCGGCGGGGGAGCCACGTTTCTGGTGTCCT...GATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | ACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGATCCAGCTCGGCGCGGTaGCAGCGTTGGTGGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: THIYSQRQRNGSRPFALGSSSAR*QRWWRR Trigger: CCTGCGCCACCAACGCTGCCACCGCGCCGAGCTGGA...TCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTGGAGCCGGCGGGGACTaGGGTGGTGTGCCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVCNRDGQAGTNPAVSILGAGGD*GGVPGE Trigger: CTCACCTGGCACACCACCCCAGTCCCCGCCGGCTCC...AAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR GCA 90 bp | CATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCACCTCGCTACCTGCGTaGTCTTGGGCCAGGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HLFTETEEREQTFRAGNSTSLPA*SWARWR Trigger: GCGCCACCTGGCCCAAGAGCACGCAGGTAGCGAGGT...GGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGCTTCCCTCTTCCTTACTGCAAACCGGGAGCGCAATTGGAAGGGCGGAGGTTCACCCCCTTCCGATaGACCCCCACATTCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSFPLPYCKPGAQLEGRRFTPFR*TPTFCP Trigger: GGGGCAGAATGTGGGGGTGCATCGGAAGGGGGTGAA...CCTCCGCCCTTCCAATTGCGCTCCCGGTTTGCAGTAAGGAAGAGGGAAGCTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGCTTCCCTCTTCCTTACTGCAAACCGGGAGCGCAATTGGAAGGGCGGAGGAGCCCTTCTGCCTCCTaGTTAAGTGGCTGCGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSFPLPYCKPGAQLEGRRSPSAS*LSGCGG Trigger: GCCTCCGCAGCCACTTAAGCAGGAGGCAGAAGGGCT...CCTCCGCCCTTCCAATTGCGCTCCCGGTTTGCAGTAAGGAAGAGGGAAGCTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCTCCGCCTTGCCCTGCCTTACTTAAGACACGTGTTGGGGTGAGAAGTTCCAGGTGGCGGGAAAGGTaGGCAGGCCTGCGGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CPPPCPALLKTRVGVRSSRWRER*AGLRKA Trigger: AGCTTTCCGCAGGCCTGCCCACCTTTCCCGCCACCT...GGAACTTCTCACCCCAACACGTGTCTTAAGTAAGGCAGGGCAAGGCGGAGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | CATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCCTACCTGCGTGCTCTTaGGCCAGGTGGCGCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLFTETEEREQTFRAGNSLPACS*ARWRLS Trigger: GCTCAGGCGCCACCTGGCCCAAGAGCACGCAGGTAG...GGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTACCTGCGTGCTCTTaGGCCAGGTGGCGCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVCNRDGQAGTNPAVSILPACS*ARWRLS Trigger: GCTCAGGCGCCACCTGGCCCAAGAGCACGCAGGTAG...GATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | AACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACACTGGTGTCGCTTaGGGCGGGGCGGGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSHLFTETEEREQTFRAGNTGVA*GGAGVL Trigger: GAGGACCCCCGCCCCGCCCCAAGCGACACCAGTGTT...CCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | CACGAACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCAGGACACCAGAAACGTaGCTCCCCCGCCGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HELTFIHRDRGTGADLSRRTPET*LPRRRP Trigger: CGGCCTCCGGCGGGGGAGCCACGTTTCTGGTGTCCT...GCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTTCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | AACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGGCGAGAGAAGCGGCGTaGGCATCGCGGGCACGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NSHLFTETEEREQTFRAGAREAA*ASRARM Trigger: CATCCGTGCCCGCGATGCCCACGCCGCTTCTCTCGC...CCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGAGGTGATGGTGTCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGGCTGAGAAAGACAGGTaGAGCCGGCGGGGACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SKEVMVSSVCNRDGQAGTAEKDR*SRRGLG Trigger: CCCCAGTCCCCGCCGGCTCCACCTGTCTTTCTCAGC...CGTCCCAGCCTGCCCATCCCTATTACAAACACTGGACACCATCACCTCTTTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR TCA 90 bp | TCCAAAGAGGTGATGGTGTCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGGGTCCGCCAGTCGCTTaGATTCCCTCTGGCAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKEVMVSSVCNRDGQAGTGPPVA*IPSGSA Trigger: TGCGCTGCCAGAGGGAATTCAAGCGACTGGCGGACC...CGTCCCAGCCTGCCCATCCCTATTACAAACACTGGACACCATCACCTCTTTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCAGGGAGGCTCTTCCTTaGTGTGCGCGATGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVFVIGMGRLGRTQQSLSREALP*CARWAE Trigger: CTCTGCCCATCGCGCACATCAAGGAAGAGCCTCCCT...GGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCTCCGCCTTGCCCTGCCTTACTTAAGACACGTGTTGGGGTGAGAAGTTCCGGGTGGTGTGCCAGGTaGGGGAGGCTCTTCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CPPPCPALLKTRVGVRSSGWCAR*GRLFLD Trigger: ATCAAGGAAGAGCCTCCCTCACCTGGCACACCACCC...GGAACTTCTCACCCCAACACGTGTCTTAAGTAAGGCAGGGCAAGGCGGAGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR TCA 90 bp | GTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCACAAAACAGGAGGCGCTaGGAAAGACAGGTGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VIGMGRLGRTQQSLSFWPQNRRR*ERQVEP Trigger: CGGCTCCACCTGTCTTTCTCAGCGCCTCCTGTTTTG...TGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR GCA 90 bp | GTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCAAAAGGTGGGCAGGCCTaGGGAAAGCTTTGGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VIGMGRLGRTQQSLSFWPKGGQA*GKLWGT Trigger: TGTGCCCCAAAGCTTTCCGCAGGCCTGCCCACCTTT...TGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR GCA 90 bp | CATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCTCCACTCCCTCGTCCTaGGGACCCCAACTGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLFTETEEREQTFRAGNSSTPSS*GPQLAS Trigger: TGAGGCCAGTTGGGGTCCGCAGGACGAGGGAGTGGA...GGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR GCA 90 bp | TCCAAAGAGGTGATGGTGTCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGTCCACTCCCTCGTCCTaGGGACCCCAACTGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKEVMVSSVCNRDGQAGTSTPSS*GPQLAS Trigger: TGAGGCCAGTTGGGGTCCGCAGGACGAGGGAGTGGA...CGTCCCAGCCTGCCCATCCCTATTACAAACACTGGACACCATCACCTCTTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR GCA 90 bp | CACGAACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCGAGTTCCTGCAGCGCTaGAGCCCTCTCCAGCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HELTFIHRDRGTGADLSREFLQR*SPLQLR Trigger: GCGGAGCTGGAGAGGGCTGCAGCGCTGCAGGAACTC...GCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTTCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR GCA 90 bp | AACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGGAGTTCCTGCAGCGCTaGAGCCCTCTCCAGCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NSHLFTETEEREQTFRAGEFLQR*SPLQLR Trigger: GCGGAGCTGGAGAGGGCTGCAGCGCTGCAGGAACTC...CCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR GCA 90 bp | GTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCACAGAGGGAGCCCTTCTaGCTCCTGCTTAAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VIGMGRLGRTQQSLSFWPQREPF*LLLKWL Trigger: CAGCCACTTAAGCAGGAGGCAGAAGGGCTCCCTCTG...TGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCGCCTGCGGAAAGCTTTaGGGCACAGAGGGCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PVFVIGMGRLGRTQQSLSACGKL*GTEGRH Trigger: ATGCCTGCCCTCTGTGCCCCAAAGCTTTCCGCAGGC...GGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTTCTTCAGCTTCCCTCTTCCTTACTGCAAACCGGGAGCGCAATTGGAAGGCGGCCTCGGCCTCCTTaGCCTCTGATTCCCGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLQLPSSLLQTGSAIGRRPRPP*PLIPED Trigger: ATCCTCGGGAATCAGAGGCCAAGGAGGCCGAGGCCG...CCTTCCAATTGCGCTCCCGGTTTGCAGTAAGGAAGAGGGAAGCTGAAGAAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGCTTCCCTCTTCCTTACTGCAAACCGGGAGCGCAATTGGAAGGGCGGAGGAGCGTCCAGTCGGCCTaGAGAAGGACCTGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSFPLPYCKPGAQLEGRRSVQSA*RRTCFS Trigger: GGAGAAACAGGTCCTTCTCCAGGCCGACTGGACGCT...CCTCCGCCCTTCCAATTGCGCTCCCGGTTTGCAGTAAGGAAGAGGGAAGCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | ACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAGGGCGCAGACACGGGTaGGCTTTGAGCTCCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: THIYSQRQRNGSRPFALGGRRHG*ALSSPL Trigger: CAAGGGGGAGCTCAAAGCCCACCCGTGTCTGCGCCC...TCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | AATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCAAGGGCCAGGCCGCAGTCTaGACACACAAAAGGTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: NRDGQAGTNPAVSILLAKGQAAV*THKRSI Trigger: GATCGACCTTTTGTGTGTCCAGACTGCGGCCTGGCC...CTTGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGAGGTGATGGTGTCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGGAGGCCGGGCTGGGGTaGCATCTCCTCCATTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKEVMVSSVCNRDGQAGTEAGLG*HLLHYA Trigger: GGCATAATGGAGGAGATGCCACCCCAGCCCGGCCTC...CGTCCCAGCCTGCCCATCCCTATTACAAACACTGGACACCATCACCTCTTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCGAGGCCGGGCTGGGGTaGCATCTCCTCCATTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVCNRDGQAGTNPAVSIEAGLG*HLLHYA Trigger: GGCATAATGGAGGAGATGCCACCCCAGCCCGGCCTC...GATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | ACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAGCTGAGAAAGACAGGTaGAGCCGGCGGGGACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: THIYSQRQRNGSRPFALGAEKDR*SRRGLG Trigger: CCCCAGTCCCCGCCGGCTCCACCTGTCTTTCTCAGC...TCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR TCA 90 bp | TGCACGAACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCAGGCTGGGGCGACTGTaGGGCCTGGGTCTGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTNSHLFTETEEREQTFRRLGRL*GLGLEF Trigger: GAACTCCAGACCCAGGCCTCACAGTCGCCCCAGCCT...GCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTTCGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162731.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCAAAGGTGGGCAGGCCTaGGGAAAGCTTTGGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PVFVIGMGRLGRTQQSLSKGGQA*GKLWGT Trigger: TGTGCCCCAAAGCTTTCCGCAGGCCTGCCCACCTTT...GGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR GCA 90 bp | ACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAGGGACTGGGGTGGTGTaGCAGGTGAGGGAGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: THIYSQRQRNGSRPFALGGTGVV*QVREAL Trigger: AAGAGCCTCCCTCACCTGGCACACCACCCCAGTCCC...TCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCTCCGCCTTGCCCTGCCTTACTTAAGACACGTGTTGGGGTGAGAAGTTCCTCACTGCCCTCTGCGTaGACAGATCCACCTCGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: CPPPCPALLKTRVGVRSSSLPSA*TDPPRY Trigger: GTAGCGAGGTGGATCTGTCCACGCAGAGGGCAGTGA...GGAACTTCTCACCCCAACACGTGTCTTAAGTAAGGCAGGGCAAGGCGGAGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | CACGAACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCCGGCCTCGGCCTCCTTaGCCTCTGATTCCCGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HELTFIHRDRGTGADLSRRPRPP*PLIPED Trigger: ATCCTCGGGAATCAGAGGCCAAGGAGGCCGAGGCCG...GCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTTCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | CACGAACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCAGGCAGATGGAACACTaGTGTCGCTTGGGGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HELTFIHRDRGTGADLSRRQMEH*CRLGRG Trigger: GCCCCGCCCCAAGCGACACCAGTGTTCCATCTGCCT...GCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | ACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAGGCGACTGTGAGGCCTaGGTCTGGAGTTCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: THIYSQRQRNGSRPFALGGDCEA*VWSSCS Trigger: GCTGCAGGAACTCCAGACCCAGGCCTCACAGTCGCC...TCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CCA 90 bp | TCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACGGCGACTGTGAGGCCTaGGTCTGGAGTTCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHLFTETEEREQTFRAGNGDCEA*VWSSCS Trigger: GCTGCAGGAACTCCAGACCCAGGCCTCACAGTCGCC...GTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR TCA 90 bp | AACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGGGCCTCCTTGGCCTCTaGTTCCCGAGGATCCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: NSHLFTETEEREQTFRAGGLLGL*FPRIRT Trigger: AGTACGGATCCTCGGGAATCAGAGGCCAAGGAGGCC...CCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTGGCCTCCTTGGCCTCTaGTTCCCGAGGATCCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SVCNRDGQAGTNPAVSILGLLGL*FPRIRT Trigger: AGTACGGATCCTCGGGAATCAGAGGCCAAGGAGGCC...AAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR TCA 90 bp | CACGAACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCAGGGAGGCTCTTCCTTaGTGTGCGCGATGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HELTFIHRDRGTGADLSRREALP*CARWAE Trigger: CTCTGCCCATCGCGCACATCAAGGAAGAGCCTCCCT...GCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTTCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCAAAACAGGAGGCGCTaGGAAAGACAGGTGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSVCNRDGQAGTNPAVSIQNRRR*ERQVEP Trigger: CGGCTCCACCTGTCTTTCTCAGCGCCTCCTGTTTTG...GATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR GCA 90 bp | CATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCTCCTTCACTGCCCTCTaGGTGGACAGATCCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HLFTETEEREQTFRAGNSSFTAL*VDRSTS Trigger: CGAGGTGGATCTGTCCACGCAGAGGGCAGTGAAGGA...GGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR GCA 90 bp | ACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAAGCCCTTCTGCCTCCTaGTTAAGTGGCTGCGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: THIYSQRQRNGSRPFALGSPSAS*LSGCGG Trigger: GCCTCCGCAGCCACTTAAGCAGGAGGCAGAAGGGCT...TCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR GCA 90 bp | TCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCAGAGGGAGCCCTTCTaGCTCCTGCTTAAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSVCNRDGQAGTNPAVSIQREPF*LLLKWL Trigger: CAGCCACTTAAGCAGGAGGCAGAAGGGCTCCCTCTG...GATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | TGCACGAACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCAGGCAGATGGAACACTaGTGTCGCTTGGGGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CTNSHLFTETEEREQTFRRQMEH*CRLGRG Trigger: GCCCCGCCCCAAGCGACACCAGTGTTCCATCTGCCT...GCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTTCGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | ACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGATGTGAGGCCTGGGTCTaGAGTTCCTGCAGCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: THIYSQRQRNGSRPFALGCEAWV*SSCSAA Trigger: TGCAGCGCTGCAGGAACTCCAGACCCAGGCCTCACA...TCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR TCA 90 bp | TGCACGAACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGGGTGGTGTGCCAGGTaGGGGAGGCTCTTCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CTNSHLFTETEEREQTFRGWCAR*GRLFLD Trigger: ATCAAGGAAGAGCCTCCCTCACCTGGCACACCACCC...GCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTTCGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162731.2 |
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| CDS-3UTR GCA 90 bp | AGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTAGGCTCCTCCTTCACTaGCCTCTGCGTGGACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SVCNRDGQAGTNPAVSILRLLLH*PLRGQI Trigger: GATCTGTCCACGCAGAGGGCAGTGAAGGAGGAGCCT...AAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR GCA 90 bp | ACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAAGGCTCCTCCTTCACTaGCCTCTGCGTGGACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: THIYSQRQRNGSRPFALGRLLLH*PLRGQI Trigger: GATCTGTCCACGCAGAGGGCAGTGAAGGAGGAGCCT...TCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR GCA 90 bp | CATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCGGCGTCGGAAACCTTTaGCACACTCAGGACACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLFTETEEREQTFRAGNSGVGNL*HTQDTR Trigger: TCTGGTGTCCTGAGTGTGGCAAAGGTTTCCGACGCC...GGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | GGCAGTTCCAAAGAGGTGATGGTGTCCAGTGTTTGTAATAGGGATGGGCAGGCTTCACTGCCCTCTGCGTaGACAGATCCACCTCGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GSSKEVMVSSVCNRDGQASLPSA*TDPPRY Trigger: GTAGCGAGGTGGATCTGTCCACGCAGAGGGCAGTGA...AGCCTGCCCATCCCTATTACAAACACTGGACACCATCACCTCTTTGGAACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | GGCAGTTCCAAAGAGGTGATGGTGTCCAGTGTTTGTAATAGGGATGGGCAGGCTAGCGTCCAGTCGGCCTaGAGAAGGACCTGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSSKEVMVSSVCNRDGQASVQSA*RRTCFS Trigger: GGAGAAACAGGTCCTTCTCCAGGCCGACTGGACGCT...AGCCTGCCCATCCCTATTACAAACACTGGACACCATCACCTCTTTGGAACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | TCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACGGCCAGGCCGCAGTCTaGACACACAAAAGGTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: SHLFTETEEREQTFRAGNGQAAV*THKRSI Trigger: GATCGACCTTTTGTGTGTCCAGACTGCGGCCTGGCC...GTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR GCA 90 bp | CACGAACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCGGCGTCGGAAACCTTTaGCACACTCAGGACACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HELTFIHRDRGTGADLSRGVGNL*HTQDTR Trigger: TCTGGTGTCCTGAGTGTGGCAAAGGTTTCCGACGCC...GCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTTCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | TGTCCTCCGCCTTGCCCTGCCTTACTTAAGACACGTGTTGGGGTGAGAAGTTCCAAGGCTGAATGGTCTTaGCTGTCAAAACAGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CPPPCPALLKTRVGVRSSKAEWS*LSKQEA Trigger: CGCCTCCTGTTTTGACAGCCAAGACCATTCAGCCTT...GGAACTTCTCACCCCAACACGTGTCTTAAGTAAGGCAGGGCAAGGCGGAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | CCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCAAGGCTGAATGGTCTTaGCTGTCAAAACAGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PVFVIGMGRLGRTQQSLSKAEWS*LSKQEA Trigger: CGCCTCCTGTTTTGACAGCCAAGACCATTCAGCCTT...GGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CCA 90 bp | CTTCCCTCTTCCTTACTGCAAACCGGGAGCGCAATTGGAAGGGCGGAGGGTGGAATCTCGAAGGCTGAATaGTCTTGGCTGTCAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPSSLLQTGSAIGRAEGGISKAE*SWLSKQ Trigger: CTGTTTTGACAGCCAAGACCATTCAGCCTTCGAGAT...TCCACCCTCCGCCCTTCCAATTGCGCTCCCGGTTTGCAGTAAGGAAGAGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR TCA 90 bp | TCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTCCATCTCGAAGGCTaGATGGTCTTGGCTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSVCNRDGQAGTNPAVSILHLEG*MVLAVK Trigger: TTTGACAGCCAAGACCATTCAGCCTTCGAGATGGAG...GATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR TCA 90 bp | ACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGACTCCATCTCGAAGGCTaGATGGTCTTGGCTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: THIYSQRQRNGSRPFALGLHLEG*MVLAVK Trigger: TTTGACAGCCAAGACCATTCAGCCTTCGAGATGGAG...TCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | GGCTCCGGGAAGGTGCGTGGGCAGGCAGCGCAGCGCAGCGGGGGCTaGGGCCCGTGGCCACGAAGGTGGCGGGAAAGGTGGGCAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSGKVRGQAAQRSGG*GPWPRRWRERWAGL Trigger: CAGGCCTGCCCACCTTTCCCGCCACCTTCGTGGCCACGGGCCCCAGCCCCCGCTGCGCTGCGCTGCCTGCCCACGCACCTTCCCGGAGCC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | CTCGCTACCTGCGTGCTCTTGGGCCAGGTGGCGCCTGAGCTGGGCTaGCTCCGGGAAGGTGCGTGGGCAGGCAGCGCAGCGCAGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LATCVLLGQVAPELG*LREGAWAGSAAQRG Trigger: CCCCCGCTGCGCTGCGCTGCCTGCCCACGCACCTTCCCGGAGCCAGCCCAGCTCAGGCGCCACCTGGCCCAAGAGCACGCAGGTAGCGAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | AAGGTGCGTGGGCAGGCAGCGCAGCGCAGCGGGGGCTGGGGCCCGTaGCCACGAAGGTGGCGGGAAAGGTGGGCAGGCCTGCGGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KVRGQAAQRSGGWGP*PRRWRERWAGLRKA Trigger: AGCTTTCCGCAGGCCTGCCCACCTTTCCCGCCACCTTCGTGGCCACGGGCCCCAGCCCCCGCTGCGCTGCGCTGCCTGCCCACGCACCTT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | GCAGCGTTGGTGGCGCAGGAGGCTGTAAGCGCGAGAGAAGCGGCGTaGGCATCGCGGGCACGGATGCGGGGCGGGACCCCCAGCATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AALVAQEAVSAREAA*ASRARMRGGTPSMD Trigger: GTCCATGCTGGGGGTCCCGCCCCGCATCCGTGCCCGCGATGCCCACGCCGCTTCTCTCGCGCTTACAGCCTCCTGCGCCACCAACGCTGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS GCA 90 bp | GCCCCGGCCACCACCACCGTGGCGGGCTGTTCCACTCCCTCGTCCTaGGGACCCCAACTGGCCTCAGGCTCCTCCTTCACTGCCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: APATTTVAGCSTPSS*GPQLASGSSFTALC Trigger: GCAGAGGGCAGTGAAGGAGGAGCCTGAGGCCAGTTGGGGTCCGCAGGACGAGGGAGTGGAACAGCCCGCCACGGTGGTGGTGGCCGGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | CGGCCTCGGCCTCCTTGGCCTCTGATTCCCGAGGATCCGTACTCGTaGGGACAGCCGCAGGAGCCGAGTCCCCTGCGGGCCACTGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPRPPWPLIPEDPYS*GQPQEPSPLRATVW Trigger: CCACACAGTGGCCCGCAGGGGACTCGGCTCCTGCGGCTGTCCCCACGAGTACGGATCCTCGGGAATCAGAGGCCAAGGAGGCCGAGGCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | GGTCCTCCTTCGCCCTCCTGTTCGCCCTCGGGGCGCAGACACGGGTaGGCTTTGAGCTCCCCCTTGGTGGCGAAGGCTTCGCGACAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GPPSPSCSPSGRRHG*ALSSPLVAKASRQR Trigger: CCGCTGTCGCGAAGCCTTCGCCACCAAGGGGGAGCTCAAAGCCCACCCGTGTCTGCGCCCCGAGGGCGAACAGGAGGGCGAAGGAGGACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | GGCCACGAAGGTGGCGGGAAAGGTGGGCAGGCCTGCGGAAAGCTTTaGGGCACAGAGGGCAGGCATGGGGCCGGAGACCCGAGTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GHEGGGKGGQACGKL*GTEGRHGAGDPSGS Trigger: TGAGCCACTCGGGTCTCCGGCCCCATGCCTGCCCTCTGTGCCCCAAAGCTTTCCGCAGGCCTGCCCACCTTTCCCGCCACCTTCGTGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | TGCGTGGACAGATCCACCTCGCTACCTGCGTGCTCTTGGGCCAGGTaGCGCCTGAGCTGGGCTGGCTCCGGGAAGGTGCGTGGGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CVDRSTSLPACSWAR*RLSWAGSGKVRGQA Trigger: TGCCTGCCCACGCACCTTCCCGGAGCCAGCCCAGCTCAGGCGCCACCTGGCCCAAGAGCACGCAGGTAGCGAGGTGGATCTGTCCACGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | GCCTCCTGCTTAAGTGGCTGCGGAGGCTGGGGCGACTGTGAGGCCTaGGTCTGGAGTTCCTGCAGCGCTGCAGCCCTCTCCAGCTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASCLSGCGGWGDCEA*VWSSCSAAALSSSA Trigger: GGCGGAGCTGGAGAGGGCTGCAGCGCTGCAGGAACTCCAGACCCAGGCCTCACAGTCGCCCCAGCCTCCGCAGCCACTTAAGCAGGAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS TCA 90 bp | CTTCGCCCTCCTGTTCGCCCTCGGGGCGCAGACACGGGTGGGCTTTaGGCTCCCCCTTGGTGGCGAAGGCTTCGCGACAGCGGAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: LRPPVRPRGADTGGL*APPWWRRLRDSGDT Trigger: TGTGTCTCCGCTGTCGCGAAGCCTTCGCCACCAAGGGGGAGCTCAAAGCCCACCCGTGTCTGCGCCCCGAGGGCGAACAGGAGGGCGAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS TCA 90 bp | GCCAGGTCCGCCAGTCGCTTGAATTCCCTCTGGCAGCGCACGCACTaGAAAGGGCGCGCCCCGGAGTGGGTGACCCCATGCTGGCGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ARSASRLNSLWQRTH*KGRAPEWVTPCWRR Trigger: CCTACGCCAGCATGGGGTCACCCACTCCGGGGCGCGCCCTTTTCAGTGCGTGCGCTGCCAGAGGGAATTCAAGCGACTGGCGGACCTGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | ACTGCCCTCTGCGTGGACAGATCCACCTCGCTACCTGCGTGCTCTTaGGCCAGGTGGCGCCTGAGCTGGGCTGGCTCCGGGAAGGTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: TALCVDRSTSLPACS*ARWRLSWAGSGKVR Trigger: ACGCACCTTCCCGGAGCCAGCCCAGCTCAGGCGCCACCTGGCCCAAGAGCACGCAGGTAGCGAGGTGGATCTGTCCACGCAGAGGGCAGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | GTGCCAACTCTGCCCTTAGCTCCGCTGCCCCGGCCTCGGCCTCCTTaGCCTCTGATTCCCGAGGATCCGTACTCGTGGGGACAGCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VPTLPLAPLPRPRPP*PLIPEDPYSWGQPQ Trigger: CTGCGGCTGTCCCCACGAGTACGGATCCTCGGGAATCAGAGGCCAAGGAGGCCGAGGCCGGGGCAGCGGAGCTAAGGGCAGAGTTGGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | GCGAAGGCTTCGCGACAGCGGAGACACAGCAGCGTCCAGTCGGCCTaGAGAAGGACCTGTTTCTCCTCCTGTCGCCCCGCGGCCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AKASRQRRHSSVQSA*RRTCFSSCRPAASA Trigger: GGCACTGGCCGCGGGGCGACAGGAGGAGAAACAGGTCCTTCTCCAGGCCGACTGGACGCTGCTGTGTCTCCGCTGTCGCGAAGCCTTCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS TCA 90 bp | CCCTTCTGCCTCCTGCTTAAGTGGCTGCGGAGGCTGGGGCGACTGTaGGGCCTGGGTCTGGAGTTCCTGCAGCGCTGCAGCCCTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PFCLLLKWLRRLGRL*GLGLEFLQRCSPLQ Trigger: CTGGAGAGGGCTGCAGCGCTGCAGGAACTCCAGACCCAGGCCTCACAGTCGCCCCAGCCTCCGCAGCCACTTAAGCAGGAGGCAGAAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | GTGTCGAGACAGGTAGTAAGGGAAGCGGAAGAGGCGACCACAGGTTaGGCAGGGCAGAGGCGCCCTAGGGGCTCCAGCACCCCCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VSRQVVREAEEATTG*AGQRRPRGSSTPSA Trigger: GGCAGAGGGGGTGCTGGAGCCCCTAGGGCGCCTCTGCCCTGCCCAACCTGTGGTCGCCTCTTCCGCTTCCCTTACTACCTGTCTCGACAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | GCGGACCCCAACTGGCCTCAGGCTCCTCCTTCACTGCCCTCTGCGTaGACAGATCCACCTCGCTACCTGCGTGCTCTTGGGCCAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ADPNWPQAPPSLPSA*TDPPRYLRALGPGG Trigger: GCCACCTGGCCCAAGAGCACGCAGGTAGCGAGGTGGATCTGTCCACGCAGAGGGCAGTGAAGGAGGAGCCTGAGGCCAGTTGGGGTCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | CCACCGTGGCGGGCTGTTCCACTCCCTCGTCCTGCGGACCCCAACTaGCCTCAGGCTCCTCCTTCACTGCCCTCTGCGTGGACAGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPWRAVPLPRPADPN*PQAPPSLPSAWTDP Trigger: TGGATCTGTCCACGCAGAGGGCAGTGAAGGAGGAGCCTGAGGCCAGTTGGGGTCCGCAGGACGAGGGAGTGGAACAGCCCGCCACGGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS GCA 90 bp | TCCTGCGGACCCCAACTGGCCTCAGGCTCCTCCTTCACTGCCCTCTaGGTGGACAGATCCACCTCGCTACCTGCGTGCTCTTGGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCGPQLASGSSFTAL*VDRSTSLPACSWAR Trigger: CCTGGCCCAAGAGCACGCAGGTAGCGAGGTGGATCTGTCCACGCAGAGGGCAGTGAAGGAGGAGCCTGAGGCCAGTTGGGGTCCGCAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS-3UTR CAA 90 bp | CAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCCAGGGTCTGGCCGGCCTCGGCCTCCTaGGCCTCTGATTCCCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QRQRNGSRPFALGTPRVWPASAS*ASDSRG Trigger: TCCTCGGGAATCAGAGGCCAAGGAGGCCGAGGCCGG...CCAGACCCTGGGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CAA 90 bp | CAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCCAGGGTCTGGCGTCCGCCCGAGGCCTaGTCATCCTTCTTGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QRQRNGSRPFALGTPRVWRPPEA*SSFLPA Trigger: GGCCGGCAAGAAGGATGACAAGGCCTCGGGCGGACG...CCAGACCCTGGGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS GCA 90 bp | TCCCTCGTCCTGCGGACCCCAACTGGCCTCAGGCTCCTCCTTCACTaGCCTCTGCGTGGACAGATCCACCTCGCTACCTGCGTGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLVLRTPTGLRLLLH*PLRGQIHLATCVLL Trigger: CAAGAGCACGCAGGTAGCGAGGTGGATCTGTCCACGCAGAGGGCAGTGAAGGAGGAGCCTGAGGCCAGTTGGGGTCCGCAGGACGAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS GCA 90 bp | TCTTCCTTGATGTGCGCGATGGGCAGAGGGAGCCCTTCTGCCTCCTaGTTAAGTGGCTGCGGAGGCTGGGGCGACTGTGAGGCCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSLMCAMGRGSPSAS*LSGCGGWGDCEAWV Trigger: GACCCAGGCCTCACAGTCGCCCCAGCCTCCGCAGCCACTTAAGCAGGAGGCAGAAGGGCTCCCTCTGCCCATCGCGCACATCAAGGAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS CCA 90 bp | AGCGGAAGGCCAGGCCGCAGTCTGGACACACAAAAGGTCGATCGGTaGAGTGGACTAGCCGGTGACGCGATAGGGACCAGGGCCTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SGRPGRSLDTQKVDR*SGLAGDAIGTRAWR Trigger: TCGCCAGGCCCTGGTCCCTATCGCGTCACCGGCTAGTCCACTCCACCGATCGACCTTTTGTGTGTCCAGACTGCGGCCTGGCCTTCCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCCAGGGTCTGGGCTTTGAGCTCCCCCTaGGTGGCGAAGGCTTCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: QRQRNGSRPFALGTPRVWALSSP*VAKASR Trigger: TCGCGAAGCCTTCGCCACCAAGGGGGAGCTCAAAGC...CCAGACCCTGGGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | GTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCAGGCGCGGTGGCAGCGTaGGTGGCGCAGGAGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VIGMGRLGRTQQSLSFWPGAVAA*VAQEAV Trigger: TACAGCCTCCTGCGCCACCAACGCTGCCACCGCGCC...TGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | GTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCAAGACACGGGTGGGCTTaGAGCTCCCCCTTGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VIGMGRLGRTQQSLSFWPRHGWA*SSPLVA Trigger: CGCCACCAAGGGGGAGCTCAAAGCCCACCCGTGTCT...TGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS TCA 90 bp | CAGTCTGGACACACAAAAGGTCGATCGGTGGAGTGGACTAGCCGGTaGCGCGATAGGGACCAGGGCCTGGCGAAAGCCTTGAGGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QSGHTKGRSVEWTSR*RDRDQGLAKALRQM Trigger: CATCTGCCTCAAGGCTTTCGCCAGGCCCTGGTCCCTATCGCGTCACCGGCTAGTCCACTCCACCGATCGACCTTTTGTGTGTCCAGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS-3UTR CAA 90 bp | CATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACTCCGCTACCTGCGTGCTCTaGGGCCAGGTGGCGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HLFTETEEREQTFRAGNSATCVL*GQVAPE Trigger: CTCAGGCGCCACCTGGCCCAAGAGCACGCAGGTAGC...GGAGTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCGCTACCTGCGTGCTCTaGGGCCAGGTGGCGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSVCNRDGQAGTNPAVSIATCVL*GQVAPE Trigger: CTCAGGCGCCACCTGGCCCAAGAGCACGCAGGTAGC...GATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGAGGTGATGGTGTCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGCGTCCGCCCGAGGCCTaGTCATCCTTCTTGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SKEVMVSSVCNRDGQAGTRPPEA*SSFLPA Trigger: GGCCGGCAAGAAGGATGACAAGGCCTCGGGCGGACG...CGTCCCAGCCTGCCCATCCCTATTACAAACACTGGACACCATCACCTCTTTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | TCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAACGGCGCGGTGGCAGCGTaGGTGGCGCAGGAGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SHLFTETEEREQTFRAGNGAVAA*VAQEAV Trigger: TACAGCCTCCTGCGCCACCAACGCTGCCACCGCGCC...GTTCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | AATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCAAGGGCCTGGCGAAAGCCTaGAGGCAGATGGAACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: NRDGQAGTNPAVSILLAKGLAKA*RQMEHW Trigger: CCAGTGTTCCATCTGCCTCAAGGCTTTCGCCAGGCC...CTTGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTTCTTCAGCTTCCCTCTTCCTTACTGCAAACCGGGAGCGCAATTGGAAGGGCCTTGTCATCCTTCTaGCCGGCCCCGGGTAACGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLQLPSSLLQTGSAIGRALSSF*PAPGNG Trigger: CCCGTTACCCGGGGCCGGCAAGAAGGATGACAAGGC...CCTTCCAATTGCGCTCCCGGTTTGCAGTAAGGAAGAGGGAAGCTGAAGAAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | AATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCTTCTGGCCAAGCGGCGTCGGAAACCTTaGCCACACTCAGGACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: NRDGQAGTNPAVSILLAKRRRKP*PHSGHQ Trigger: CTGGTGTCCTGAGTGTGGCAAAGGTTTCCGACGCCG...CTTGGCCAGAAGGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | CACGAACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCAGACACGGGTGGGCTTaGAGCTCCCCCTTGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: HELTFIHRDRGTGADLSRRHGWA*SSPLVA Trigger: CGCCACCAAGGGGGAGCTCAAAGCCCACCCGTGTCT...GCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTTCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | CACGAACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCGCCTTGTCATCCTTCTaGCCGGCCCCGGGTAACGGG | + |
|
Preference number: 5 (lower is better) Translates to: HELTFIHRDRGTGADLSRALSSF*PAPGNG Trigger: CCCGTTACCCGGGGCCGGCAAGAAGGATGACAAGGC...GCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTTCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCGAGGGAGGCTCTTCCTaGATGTGCGCGATGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PVFVIGMGRLGRTQQSLSEGGSS*MCAMGR Trigger: TCTGCCCATCGCGCACATCAAGGAAGAGCCTCCCTC...GGATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGTGTTTGTAATAGGGATGGGCAGGCTGGGACGAACCCAGCAGTCTCTATCCGGCGTCGGAAACCTTaGCCACACTCAGGACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSVCNRDGQAGTNPAVSIRRRKP*PHSGHQ Trigger: CTGGTGTCCTGAGTGTGGCAAAGGTTTCCGACGCCG...GATAGAGACTGCTGGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | TGCACGAACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTTTGAGCTCCCCCTaGGTGGCGAAGGCTTCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: CTNSHLFTETEEREQTFRALSSP*VAKASR Trigger: TCGCGAAGCCTTCGCCACCAAGGGGGAGCTCAAAGC...GCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGTTCGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | ACTCACATTTATTCACAGAGACAGAGGAACGGGAGCAGACCTTTCGCGCTGGGAGGCCTGGCGAAAGCCTaGAGGCAGATGGAACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: THIYSQRQRNGSRPFALGGLAKA*RQMEHW Trigger: CCAGTGTTCCATCTGCCTCAAGGCTTTCGCCAGGCC...TCCCAGCGCGAAAGGTCTGCTCCCGTTCCTCTGTCTCTGTGAATAAATGTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGTTCCAAAGAGGTGATGGTGTCCAGTGTTTGTAATAGGGATGGGCAGGCTGAGGGAGGCTCTTCCTaGATGTGCGCGATGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSSKEVMVSSVCNRDGQAEGGSS*MCAMGR Trigger: TCTGCCCATCGCGCACATCAAGGAAGAGCCTCCCTC...AGCCTGCCCATCCCTATTACAAACACTGGACACCATCACCTCTTTGGAACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | TTACTGTCCATCTCCTCATCCTCCATCTCGAAGGCTGAATGGTCTTaGCTGTCAAAACAGGAGGCGCTGAGAAAGACAGGTGGAGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLSISSSSISKAEWS*LSKQEALRKTGGAG Trigger: GCCGGCTCCACCTGTCTTTCTCAGCGCCTCCTGTTTTGACAGCCAAGACCATTCAGCCTTCGAGATGGAGGATGAGGAGATGGACAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS CCA 90 bp | TGGGCCTTACTGTCCATCTCCTCATCCTCCATCTCGAAGGCTGAATaGTCTTGGCTGTCAAAACAGGAGGCGCTGAGAAAGACAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WALLSISSSSISKAE*SWLSKQEALRKTGG Trigger: TCCACCTGTCTTTCTCAGCGCCTCCTGTTTTGACAGCCAAGACCATTCAGCCTTCGAGATGGAGGATGAGGAGATGGACAGTAAGGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS CCA 72 bp | AAGGTGCGTGGGCAGGCAGCGCAGCGCAGCGGGGGCTaGGGCCCGTGGCCACGAAGGTGGCGGGAAAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: KVRGQAAQRSGG*GPWPRRWRERW Trigger: CCACCTTTCCCGCCACCTTCGTGGCCACGGGCCCCAGCCCCCGCTGCGCTGCGCTGCCTGCCCACGCACCTT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CCA 72 bp | GTGGCGCAGGAGGCTGTAAGCGCGAGAGAAGCGGCGTaGGCATCGCGGGCACGGATGCGGGGCGGGACCCCC | + |
|
Preference number: 6 (lower is better) Translates to: VAQEAVSAREAA*ASRARMRGGTP Trigger: GGGGGTCCCGCCCCGCATCCGTGCCCGCGATGCCCACGCCGCTTCTCTCGCGCTTACAGCCTCCTGCGCCAC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS TCA 72 bp | CCTTCTTGCCGGCCCCGGGTAACGGGGCCAGCAGGCTaGGTGGACCATGGACGCGGCGGTGCTGGCGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PSCRPRVTGPAG*VDHGRGGAGGG Trigger: ACCTCCGCCAGCACCGCCGCGTCCATGGTCCACTCAGCCTGCTGGCCCCGTTACCCGGGGCCGGCAAGAAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS CAA 90 bp | AGCCCTCTCCAGCTCCGCCCGTTCCAGCTCGGCGCGGTGGCAGCGTaGGTGGCGCAGGAGGCTGTAAGCGCGAGAGAAGCGGCGTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPLQLRPFQLGAVAA*VAQEAVSAREAAWA Trigger: TGCCCACGCCGCTTCTCTCGCGCTTACAGCCTCCTGCGCCACCAACGCTGCCACCGCGCCGAGCTGGAACGGGCGGAGCTGGAGAGGGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS CCA 72 bp | GGTGGCGGGAAAGGTGGGCAGGCCTGCGGAAAGCTTTaGGGCACAGAGGGCAGGCATGGGGCCGGAGACCCG | + |
|
Preference number: 6 (lower is better) Translates to: GGGKGGQACGKL*GTEGRHGAGDP Trigger: CGGGTCTCCGGCCCCATGCCTGCCCTCTGTGCCCCAAAGCTTTCCGCAGGCCTGCCCACCTTTCCCGCCACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CAA 72 bp | CAGCTCCGCCCGTTCCAGCTCGGCGCGGTGGCAGCGTaGGTGGCGCAGGAGGCTGTAAGCGCGAGAGAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: QLRPFQLGAVAA*VAQEAVSAREA Trigger: CGCTTCTCTCGCGCTTACAGCCTCCTGCGCCACCAACGCTGCCACCGCGCCGAGCTGGAACGGGCGGAGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS CAA 90 bp | TGGCCACGAAGGTGGCGGGAAAGGTGGGCAGGCCTGCGGAAAGCTTaGGGGCACAGAGGGCAGGCATGGGGCCGGAGACCCGAGTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WPRRWRERWAGLRKA*GHRGQAWGRRPEWL Trigger: GAGCCACTCGGGTCTCCGGCCCCATGCCTGCCCTCTGTGCCCCAAAGCTTTCCGCAGGCCTGCCCACCTTTCCCGCCACCTTCGTGGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CAA 90 bp | CCTTCGCCCTCCTGTTCGCCCTCGGGGCGCAGACACGGGTGGGCTTaGAGCTCCCCCTTGGTGGCGAAGGCTTCGCGACAGCGGAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: PSPSCSPSGRRHGWA*SSPLVAKASRQRRH Trigger: GTGTCTCCGCTGTCGCGAAGCCTTCGCCACCAAGGGGGAGCTCAAAGCCCACCCGTGTCTGCGCCCCGAGGGCGAACAGGAGGGCGAAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS TCA 72 bp | CCTGTTCGCCCTCGGGGCGCAGACACGGGTGGGCTTTaGGCTCCCCCTTGGTGGCGAAGGCTTCGCGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: PVRPRGADTGGL*APPWWRRLRDS Trigger: GCTGTCGCGAAGCCTTCGCCACCAAGGGGGAGCTCAAAGCCCACCCGTGTCTGCGCCCCGAGGGCGAACAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS CCA 72 bp | CCTCCTTGGCCTCTGATTCCCGAGGATCCGTACTCGTaGGGACAGCCGCAGGAGCCGAGTCCCCTGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPWPLIPEDPYS*GQPQEPSPLRA Trigger: GGCCCGCAGGGGACTCGGCTCCTGCGGCTGTCCCCACGAGTACGGATCCTCGGGAATCAGAGGCCAAGGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CCA 72 bp | TCGCCCTCCTGTTCGCCCTCGGGGCGCAGACACGGGTaGGCTTTGAGCTCCCCCTTGGTGGCGAAGGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SPSCSPSGRRHG*ALSSPLVAKAS Trigger: CGAAGCCTTCGCCACCAAGGGGGAGCTCAAAGCCCACCCGTGTCTGCGCCCCGAGGGCGAACAGGAGGGCGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS CAA 72 bp | AGGTGGCGGGAAAGGTGGGCAGGCCTGCGGAAAGCTTaGGGGCACAGAGGGCAGGCATGGGGCCGGAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: RWRERWAGLRKA*GHRGQAWGRRP Trigger: GGGTCTCCGGCCCCATGCCTGCCCTCTGTGCCCCAAAGCTTTCCGCAGGCCTGCCCACCTTTCCCGCCACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CAA 72 bp | TCGGGCCCTTTCCCTGAGTTCCGTCCGCCCGAGGCCTaGTCATCCTTCTTGCCGGCCCCGGGTAACGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGPFPEFRPPEA*SSFLPAPGNGA Trigger: GGCCCCGTTACCCGGGGCCGGCAAGAAGGATGACAAGGCCTCGGGCGGACGGAACTCAGGGAAAGGGCCCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS CAA 90 bp | TGTTCGCCCTCGGGGCGCAGACACGGGTGGGCTTTGAGCTCCCCCTaGGTGGCGAAGGCTTCGCGACAGCGGAGACACAGCAGCGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CSPSGRRHGWALSSP*VAKASRQRRHSSVQ Trigger: CTGGACGCTGCTGTGTCTCCGCTGTCGCGAAGCCTTCGCCACCAAGGGGGAGCTCAAAGCCCACCCGTGTCTGCGCCCCGAGGGCGAACA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS CAA 90 bp | GGCCCTTTCCCTGAGTTCCGTCCGCCCGAGGCCTTGTCATCCTTCTaGCCGGCCCCGGGTAACGGGGCCAGCAGGCTGAGTGGACCATGG | + |
|
Preference number: 6 (lower is better) Translates to: GPFPEFRPPEALSSF*PAPGNGASRLSGPW Trigger: CCATGGTCCACTCAGCCTGCTGGCCCCGTTACCCGGGGCCGGCAAGAAGGATGACAAGGCCTCGGGCGGACGGAACTCAGGGAAAGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS GCA 72 bp | CACTGCCCTCTGCGTGGACAGATCCACCTCGCTACCTaGGTGCTCTTGGGCCAGGTGGCGCCTGAGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HCPLRGQIHLAT*VLLGQVAPELG Trigger: GCCCAGCTCAGGCGCCACCTGGCCCAAGAGCACGCAGGTAGCGAGGTGGATCTGTCCACGCAGAGGGCAGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
||
| CDS CCA 72 bp | ACACCAGAAACGTGGCTCCCCCGCCGGAGGCCGGGCTaGGGTGGCATCTCCTCCATTATGCCCGCCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: TPETWLPRRRPG*GGISSIMPAFT Trigger: GGTGAAGGCGGGCATAATGGAGGAGATGCCACCCCAGCCCGGCCTCCGGCGGGGGAGCCACGTTTCTGGTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS CAA 72 bp | TCTGCCCTTAGCTCCGCTGCCCCGGCCTCGGCCTCCTaGGCCTCTGATTCCCGAGGATCCGTACTCGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SALSSAAPASAS*ASDSRGSVLVG Trigger: CCCCACGAGTACGGATCCTCGGGAATCAGAGGCCAAGGAGGCCGAGGCCGGGGCAGCGGAGCTAAGGGCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
||
| CDS CAA 72 bp | TCGGGGCGCAGACACGGGTGGGCTTTGAGCTCCCCCTaGGTGGCGAAGGCTTCGCGACAGCGGAGACACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGRRHGWALSSP*VAKASRQRRHS Trigger: GCTGTGTCTCCGCTGTCGCGAAGCCTTCGCCACCAAGGGGGAGCTCAAAGCCCACCCGTGTCTGCGCCCCGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS CAA 72 bp | TCCTGTTCGCCCTCGGGGCGCAGACACGGGTGGGCTTaGAGCTCCCCCTTGGTGGCGAAGGCTTCGCGACAG | + |
|
Preference number: 6 (lower is better) Translates to: SCSPSGRRHGWA*SSPLVAKASRQ Trigger: CTGTCGCGAAGCCTTCGCCACCAAGGGGGAGCTCAAAGCCCACCCGTGTCTGCGCCCCGAGGGCGAACAGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS CAA 72 bp | CCTGAGTTCCGTCCGCCCGAGGCCTTGTCATCCTTCTaGCCGGCCCCGGGTAACGGGGCCAGCAGGCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PEFRPPEALSSF*PAPGNGASRLS Trigger: ACTCAGCCTGCTGGCCCCGTTACCCGGGGCCGGCAAGAAGGATGACAAGGCCTCGGGCGGACGGAACTCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
||
| CDS CAA 90 bp | AGTGCCAACTCTGCCCTTAGCTCCGCTGCCCCGGCCTCGGCCTCCTaGGCCTCTGATTCCCGAGGATCCGTACTCGTGGGGACAGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SANSALSSAAPASAS*ASDSRGSVLVGTAA Trigger: TGCGGCTGTCCCCACGAGTACGGATCCTCGGGAATCAGAGGCCAAGGAGGCCGAGGCCGGGGCAGCGGAGCTAAGGGCAGAGTTGGCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
||
| CDS TCA 72 bp | GCCAGTCGCTTGAATTCCCTCTGGCAGCGCACGCACTaGAAAGGGCGCGCCCCGGAGTGGGTGACCCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: ASRLNSLWQRTH*KGRAPEWVTPC Trigger: GCATGGGGTCACCCACTCCGGGGCGCGCCCTTTTCAGTGCGTGCGCTGCCAGAGGGAATTCAAGCGACTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS TCA 72 bp | GGACTTGCGCGTGGCGGGCCAGGTCCGCCAGTCGCTTaGATTCCCTCTGGCAGCGCACGCACTGAAAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: GLARGGPGPPVA*IPSGSARTEKG Trigger: GCCCTTTTCAGTGCGTGCGCTGCCAGAGGGAATTCAAGCGACTGGCGGACCTGGCCCGCCACGCGCAAGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS GCA 72 bp | ACCACCACCGTGGCGGGCTGTTCCACTCCCTCGTCCTaGGGACCCCAACTGGCCTCAGGCTCCTCCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: TTTVAGCSTPSS*GPQLASGSSFT Trigger: AGTGAAGGAGGAGCCTGAGGCCAGTTGGGGTCCGCAGGACGAGGGAGTGGAACAGCCCGCCACGGTGGTGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CCA 72 bp | TCGCGACAGCGGAGACACAGCAGCGTCCAGTCGGCCTaGAGAAGGACCTGTTTCTCCTCCTGTCGCCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: SRQRRHSSVQSA*RRTCFSSCRPA Trigger: CGCGGGGCGACAGGAGGAGAAACAGGTCCTTCTCCAGGCCGACTGGACGCTGCTGTGTCTCCGCTGTCGCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108572.2 ENSMUST00000162502.2 ENSMUST00000162731.2 |
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| CDS CCA 72 bp | TCGGAAACCTTTGCCACACTCAGGACACCAGAAACGTaGCTCCCCCGCCGGAGGCCGGGCTGGGGTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: SETFATLRTPET*LPRRRPGWGGI Trigger: GATGCCACCCCAGCCCGGCCTCCGGCGGGGGAGCCACGTTTCTGGTGTCCTGAGTGTGGCAAAGGTTTCCGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS TCA 72 bp | GGTGACGCGATAGGGACCAGGGCCTGGCGAAAGCCTTaGGGCAGATGGAACACTGGTGTCGCTTGGGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: GDAIGTRAWRKP*GRWNTGVAWGG Trigger: CCCGCCCCAAGCGACACCAGTGTTCCATCTGCCTCAAGGCTTTCGCCAGGCCCTGGTCCCTATCGCGTCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS CCA 72 bp | AGCCCTTCTGCCTCCTGCTTAAGTGGCTGCGGAGGCTaGGGCGACTGTGAGGCCTGGGTCTGGAGTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SPSASCLSGCGG*GDCEAWVWSSC Trigger: GCAGGAACTCCAGACCCAGGCCTCACAGTCGCCCCAGCCTCCGCAGCCACTTAAGCAGGAGGCAGAAGGGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS GCA 72 bp | CATGCTGGCGTAGGTGTGCCCGGCGTCGGAAACCTTTaGCACACTCAGGACACCAGAAACGTGGCTCCCCCG | + |
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Preference number: 6 (lower is better) Translates to: HAGVGVPGVGNL*HTQDTRNVAPP Trigger: CGGGGGAGCCACGTTTCTGGTGTCCTGAGTGTGGCAAAGGTTTCCGACGCCGGGCACACCTACGCCAGCATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS GCA 72 bp | TTCCTTGATGTGCGCGATGGGCAGAGGGAGCCCTTCTaGCTCCTGCTTAAGTGGCTGCGGAGGCTGGGGCGA | + |
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Preference number: 6 (lower is better) Translates to: FLDVRDGQREPF*LLLKWLRRLGR Trigger: TCGCCCCAGCCTCCGCAGCCACTTAAGCAGGAGGCAGAAGGGCTCCCTCTGCCCATCGCGCACATCAAGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS CCA 72 bp | CCAGGCCGCAGTCTGGACACACAAAAGGTCGATCGGTaGAGTGGACTAGCCGGTGACGCGATAGGGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: PGRSLDTQKVDR*SGLAGDAIGTR Trigger: CCTGGTCCCTATCGCGTCACCGGCTAGTCCACTCCACCGATCGACCTTTTGTGTGTCCAGACTGCGGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS TCA 72 bp | CACACAAAAGGTCGATCGGTGGAGTGGACTAGCCGGTaGCGCGATAGGGACCAGGGCCTGGCGAAAGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: HTKGRSVEWTSR*RDRDQGLAKAL Trigger: CAAGGCTTTCGCCAGGCCCTGGTCCCTATCGCGTCACCGGCTAGTCCACTCCACCGATCGACCTTTTGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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| CDS CCA 72 bp | ATCTCCTCATCCTCCATCTCGAAGGCTGAATGGTCTTaGCTGTCAAAACAGGAGGCGCTGAGAAAGACAGGT | + |
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Preference number: 6 (lower is better) Translates to: ISSSSISKAEWS*LSKQEALRKTG Trigger: ACCTGTCTTTCTCAGCGCCTCCTGTTTTGACAGCCAAGACCATTCAGCCTTCGAGATGGAGGATGAGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108572.2 ENSMUST00000162731.2 |
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