Pregenerated sensors for ZFP575 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066721Ensembl transcript IDs: ENSMUST00000094705.3
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCTCTTTCCTAAGGCCACACATTCCCCTCTGTTCACTGGCCTCTaGCCGTGGACATGTGATGGCCTGTACCCAGTGTGGCCACACCGC | + |
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Preference number: 1 (lower is better) Translates to: GLFPKATHSPLFTGL*PWTCDGLYPVWPHR Trigger: GCGGTGTGGCCACACTGGGTACAGGCCATCACATGTCCACGGCCAGAGGCCAGTGAACAGAGGGGAATGTGTGGCCTTAGGAAAGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR CCA 90 bp | TTTCCTAAGGCCACACATTCCCCTCTGTTCACTGGCCTCTGGCCGTaGACATGTGATGGCCTGTACCCAGTGTGGCCACACCGCAGTGAA | + |
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Preference number: 1 (lower is better) Translates to: FPKATHSPLFTGLWP*TCDGLYPVWPHRSE Trigger: TTCACTGCGGTGTGGCCACACTGGGTACAGGCCATCACATGTCCACGGCCAGAGGCCAGTGAACAGAGGGGAATGTGTGGCCTTAGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR TCA 90 bp | ACCAGACTGGCCTTGAACTTTTGCAGTCTTTCTGCCTCTGCCCTCTaGGTGCTGGAACTATGGGTGTGTGGTACCACTCCCAGCTTGGTT | + |
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Preference number: 1 (lower is better) Translates to: TRLALNFCSLSASAL*VLELWVCGTTPSLV Trigger: AACCAAGCTGGGAGTGGTACCACACACCCATAGTTCCAGCACTCAGAGGGCAGAGGCAGAAAGACTGCAAAAGTTCAAGGCCAGTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR GCA 90 bp | TATGCAGACCAGACTGGCCTTGAACTTTTGCAGTCTTTCTGCCTCTaGCCTCTGAGTGCTGGAACTATGGGTGTGTGGTACCACTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: YADQTGLELLQSFCL*PLSAGTMGVWYHSQ Trigger: CTGGGAGTGGTACCACACACCCATAGTTCCAGCACTCAGAGGGCAGAGGCAGAAAGACTGCAAAAGTTCAAGGCCAGTCTGGTCTGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR GCA 90 bp | ACTTTCTATGCAGACCAGACTGGCCTTGAACTTTTGCAGTCTTTCTaGCTCTGCCCTCTGAGTGCTGGAACTATGGGTGTGTGGTACCAC | + |
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Preference number: 1 (lower is better) Translates to: TFYADQTGLELLQSF*LCPLSAGTMGVWYH Trigger: GTGGTACCACACACCCATAGTTCCAGCACTCAGAGGGCAGAGGCAGAAAGACTGCAAAAGTTCAAGGCCAGTCTGGTCTGCATAGAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR GCA 90 bp | AGACGGGAGACCTCATCACAAAACAAACATCCCACAAACCCAAAGTaGTTTCAGACAGTGTGCCTCAGGTCCCCAAGAGATTCAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: RRETSSQNKHPTNPK*FQTVCLRSPRDSEA Trigger: TGCCTCTGAATCTCTTGGGGACCTGAGGCACACTGTCTGAAAGCACTTTGGGTTTGTGGGATGTTTGTTTTGTGATGAGGTCTCCCGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR CCA 90 bp | CAGTCTTTCTGCCTCTGCCCTCTGAGTGCTGGAACTATGGGTGTGTaGTACCACTCCCAGCTTGGTTTTGTTTATTATGTTTGTTTAGTG | + |
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Preference number: 1 (lower is better) Translates to: QSFCLCPLSAGTMGV*YHSQLGFVYYVCLV Trigger: CACTAAACAAACATAATAAACAAAACCAAGCTGGGAGTGGTACCACACACCCATAGTTCCAGCACTCAGAGGGCAGAGGCAGAAAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR CAA 90 bp | TGTGGCCACACCGCAGTGAACATCCCTGATGCCTTTATCACAGGCTaGAGTGTTCAGGGCCAGTGTCACCACAACCCGCACAACTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: CGHTAVNIPDAFITG*SVQGQCHHNPHNSR Trigger: CCTGGAGTTGTGCGGGTTGTGGTGACACTGGCCCTGAACACTCAAGCCTGTGATAAAGGCATCAGGGATGTTCACTGCGGTGTGGCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR-3UTR GCA 90 bp | CATGATAGCCCTGCCTGGTCTGGAACTTTCTATGCAGACCAGACTGGCCTTGAATGTGGCCACCTCCTGTaGTCACAGCTCCGTGTACGC | + |
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Preference number: 2 (lower is better) Translates to: HDSPAWSGTFYADQTGLECGHLL*SQLRVR Trigger: GCGTACACGGAGCTGTGAGCACAGGAGGTGGCCACA...TTCAAGGCCAGTCTGGTCTGCATAGAAAGTTCCAGACCAGGCAGGGCTATCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR-3UTR TCA 90 bp | CTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGCGCGGCTCCAGACCAGACTGGCCTTaGACTTTTGCAGTCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LRTQLSAPSCNGECGRGSRPDWP*TFAVFL Trigger: CAGAAAGACTGCAAAAGTTCAAGGCCAGTCTGGTCT...GGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR-3UTR GCA 90 bp | GGACCCACACAGAGGCTCACAACTATTCCTAATATTCCAGGGGATCTGAGCCCCATGTGCCCTTGGTTCTaGCTCTGTCACCTCCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: GPTQRLTTIPNIPGDLSPMCPWF*LCHLLW Trigger: CCACAGGAGGTGACAGAGGCAGAACCAAGGGCACAT...GGGGCTCAGATCCCCTGGAATATTAGGAATAGTTGTGAGCCTCTGTGTGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGTCCTAGGACCCACACAGAGGCTCACAACTATTCCTAATATTCCAGGGGATGGCCCGCCCAAGGTTTaGGCCCAGCACCAATCTGAT | + |
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Preference number: 2 (lower is better) Translates to: LVLGPTQRLTTIPNIPGDGPPKV*AQHQSD Trigger: ATCAGATTGGTGCTGGGCTCAAACCTTGGGCGGGCC...ATCCCCTGGAATATTAGGAATAGTTGTGAGCCTCTGTGTGGGTCCTAGGACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR-3UTR GCA 90 bp | GGGCCAGTGTCACCACAACCCGCACAACTCCAGGCCCGCCCAAGGTTTGAGCCCTCTAAATCAGATTCCTaGAGAACCAATAATCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: GPVSPQPAQLQARPRFEPSKSDS*RTNNPK Trigger: TTTGGGATTATTGGTTCTGCAGGAATCTGATTTAGA...GGGCTCAAACCTTGGGCGGGCCTGGAGTTGTGCGGGTTGTGGTGACACTGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR CAA 90 bp | GCCTGGTCTGGAACTTTCTATGCAGACCAGACTGGCCTTGAACTTTaGCAGTCTTTCTGCCTCTGCCCTCTGAGTGCTGGAACTATGGGT | + |
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Preference number: 2 (lower is better) Translates to: AWSGTFYADQTGLEL*QSFCLCPLSAGTMG Trigger: ACCCATAGTTCCAGCACTCAGAGGGCAGAGGCAGAAAGACTGCAAAAGTTCAAGGCCAGTCTGGTCTGCATAGAAAGTTCCAGACCAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR-3UTR TCA 90 bp | ACCCTGGGTACATATCTAGACCACCAGGCTTTGGAAGGCTACCAGAAAAGTTCCGTCTTTATTGACAGGTaGTGGAGGCAGAGTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: TLGTYLDHQALEGYQKSSVFIDR*WRQSGQ Trigger: CTGCCCACTCTGCCTCCATCACCTGTCAATAAAGAC...GGAACTTTTCTGGTAGCCTTCCAAAGCCTGGTGGTCTAGATATGTACCCAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR-3UTR TCA 90 bp | AATGTGGGCGCGGCTCCCAACATCTTACACTTGTTCTTGCATATAAACCTAGCATCTGCCTCTGCCCTCTaGGTGCTGGAACTATGGGTG | + |
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Preference number: 2 (lower is better) Translates to: NVGAAPNILHLFLHINLASASAL*VLELWV Trigger: CACCCATAGTTCCAGCACTCAGAGGGCAGAGGCAGA...TGCTAGGTTTATATGCAAGAACAAGTGTAAGATGTTGGGAGCCGCGCCCACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR-3UTR TCA 90 bp | CACACCTACAGGCACCAGGCACAAATGTGCATATACATAATGCAGAGAAAACACGTGGCCACACCGCAGTaGACATCCCTGATGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: HTYRHQAQMCIYIMQRKHVATPQ*TSLMPL Trigger: TAAAGGCATCAGGGATGTTCACTGCGGTGTGGCCAC...GTGTTTTCTCTGCATTATGTATATGCACATTTGTGCCTGGTGCCTGTAGGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR-3UTR CCA 90 bp | AATGTGGGCGCGGCTCCCAACATCTTACACTTGTTCTTGCATATAAACCTAGCACTGCCCTCTGAGTGCTaGAACTATGGGTGTGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: NVGAAPNILHLFLHINLALPSEC*NYGCVV Trigger: TACCACACACCCATAGTTCCAGCACTCAGAGGGCAG...TGCTAGGTTTATATGCAAGAACAAGTGTAAGATGTTGGGAGCCGCGCCCACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR-3UTR GCA 90 bp | AGCACTTGTTGCTTAGCAGAGGGACTGGGTTCTTGTCCTAGGACCCACACAGAGCACCAGGCACAAATGTaGATATACATAATGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: STCCLAEGLGSCPRTHTEHQAQM*IYIMQR Trigger: TCTCTGCATTATGTATATGCACATTTGTGCCTGGTG...CTCTGTGTGGGTCCTAGGACAAGAACCCAGTCCCTCTGCTAAGCAACAAGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR TCA 72 bp | ACCACAACCCGCACAACTCCAGGCCCGCCCAAGGTTTaGGCCCAGCACCAATCTGATGACACCTGCCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: TTTRTTPGPPKV*AQHQSDDTCLC Trigger: ACAGAGGCAGGTGTCATCAGATTGGTGCTGGGCTCAAACCTTGGGCGGGCCTGGAGTTGTGCGGGTTGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR CCA 72 bp | CCTAAGGCCACACATTCCCCTCTGTTCACTGGCCTCTaGCCGTGGACATGTGATGGCCTGTACCCAGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: PKATHSPLFTGL*PWTCDGLYPVW Trigger: CCACACTGGGTACAGGCCATCACATGTCCACGGCCAGAGGCCAGTGAACAGAGGGGAATGTGTGGCCTTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR-3UTR CAA 90 bp | GCAGAGGGACTGGGTTCTTGTCCTAGGACCCACACAGAGGCTCACAACTATTCCCCAGTAGATGTGCCCTaGGTTCTGCCTCTGTCACCT | + |
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Preference number: 3 (lower is better) Translates to: AEGLGSCPRTHTEAHNYSPVDVP*VLPLSP Trigger: AGGTGACAGAGGCAGAACCAAGGGCACATCTACTGG...GGAATAGTTGTGAGCCTCTGTGTGGGTCCTAGGACAAGAACCCAGTCCCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR-3UTR CAA 90 bp | AGCACTTGTTGCTTAGCAGAGGGACTGGGTTCTTGTCCTAGGACCCACACAGAGAGAGGCACTGCAGCCTaGAGCTCTCCAGTAGATGTG | + |
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Preference number: 3 (lower is better) Translates to: STCCLAEGLGSCPRTHTERGTAA*SSPVDV Trigger: CACATCTACTGGAGAGCTCAAGGCTGCAGTGCCTCT...CTCTGTGTGGGTCCTAGGACAAGAACCCAGTCCCTCTGCTAAGCAACAAGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR TCA 72 bp | GCCTTGAACTTTTGCAGTCTTTCTGCCTCTGCCCTCTaGGTGCTGGAACTATGGGTGTGTGGTACCACTCCC | + |
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Preference number: 3 (lower is better) Translates to: ALNFCSLSASAL*VLELWVCGTTP Trigger: GGGAGTGGTACCACACACCCATAGTTCCAGCACTCAGAGGGCAGAGGCAGAAAGACTGCAAAAGTTCAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR GCA 72 bp | GCAGACCAGACTGGCCTTGAACTTTTGCAGTCTTTCTaGCTCTGCCCTCTGAGTGCTGGAACTATGGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: ADQTGLELLQSF*LCPLSAGTMGV Trigger: CACACCCATAGTTCCAGCACTCAGAGGGCAGAGGCAGAAAGACTGCAAAAGTTCAAGGCCAGTCTGGTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR GCA 72 bp | CAGACTGGCCTTGAACTTTTGCAGTCTTTCTGCCTCTaGCCTCTGAGTGCTGGAACTATGGGTGTGTGGTAC | + |
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Preference number: 3 (lower is better) Translates to: QTGLELLQSFCL*PLSAGTMGVWY Trigger: GTACCACACACCCATAGTTCCAGCACTCAGAGGGCAGAGGCAGAAAGACTGCAAAAGTTCAAGGCCAGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR CCA 72 bp | CAAAGACCTCAGAACCCTGAGAGTCCCAGGGTAGACTaGAGACGGGAGACCTCATCACAAAACAAACATCCC | + |
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Preference number: 3 (lower is better) Translates to: QRPQNPESPRVD*RRETSSQNKHP Trigger: GGGATGTTTGTTTTGTGATGAGGTCTCCCGTCTCCAGTCTACCCTGGGACTCTCAGGGTTCTGAGGTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR-3UTR CAA 90 bp | CACGGGGAAGGCAGAGCACAAGTAGTCATAAGATACCCTTGGCACATGCGCAGAACTGGCCTTGAACTTTaGCAGTCTTTCTGCCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: HGEGRAQVVIRYPWHMRRTGLEL*QSFCLC Trigger: GCAGAGGCAGAAAGACTGCAAAAGTTCAAGGCCAGT...TCTGCGCATGTGCCAAGGGTATCTTATGACTACTTGTGCTCTGCCTTCCCCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR TCA 72 bp | AGAGGCTCACAACTATTCCTAATATTCCAGGGGATCTaGGCCCCTCACACCTACAGGCACCAGGCACAAATG | + |
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Preference number: 3 (lower is better) Translates to: RGSQLFLIFQGI*APHTYRHQAQM Trigger: CATTTGTGCCTGGTGCCTGTAGGTGTGAGGGGCTCAGATCCCCTGGAATATTAGGAATAGTTGTGAGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR GCA 72 bp | GACTTAACAGATGGCTCTGTGATTAAGAGCACTTGTTaGTTAGCAGAGGGACTGGGTTCTTGTCCTAGGACC | + |
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Preference number: 3 (lower is better) Translates to: DLTDGSVIKSTC*LAEGLGSCPRT Trigger: GGTCCTAGGACAAGAACCCAGTCCCTCTGCTAAGCAACAAGTGCTCTTAATCACAGAGCCATCTGTTAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR-3UTR CAA 90 bp | CACACCTACAGGCACCAGGCACAAATGTGCATATACATAATGCAGAGAAAACACGCCTTTATCACAGGCTaGAGTGTTCAGGGCCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: HTYRHQAQMCIYIMQRKHAFITG*SVQGQC Trigger: ACACTGGCCCTGAACACTCAAGCCTGTGATAAAGGC...GTGTTTTCTCTGCATTATGTATATGCACATTTGTGCCTGGTGCCTGTAGGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR GCA 72 bp | ACCTCATCACAAAACAAACATCCCACAAACCCAAAGTaGTTTCAGACAGTGTGCCTCAGGTCCCCAAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: TSSQNKHPTNPK*FQTVCLRSPRD Trigger: ATCTCTTGGGGACCTGAGGCACACTGTCTGAAAGCACTTTGGGTTTGTGGGATGTTTGTTTTGTGATGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR GCA 72 bp | GGGGATAGAATCCCTCAACCTTCTAAATCAGATTCCTaGAGAACCAATAATCCCAAACCACCCTGGGTACAT | + |
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Preference number: 3 (lower is better) Translates to: GDRIPQPSKSDS*RTNNPKPPWVH Trigger: ATGTACCCAGGGTGGTTTGGGATTATTGGTTCTGCAGGAATCTGATTTAGAAGGTTGAGGGATTCTATCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR TCA 72 bp | TTCTCTGTGAAATTGAAGGCAGCCTGGTCTACACAGTaGATTCCAAAGCTACGTAGTGCAATCCTCTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: FSVKLKAAWSTQ*IPKLRSAILSF Trigger: AAAAGAGAGGATTGCACTACGTAGCTTTGGAATTCACTGTGTAGACCAGGCTGCCTTCAATTTCACAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | GGGCCAGTGTCACCACAACCCGCACAACTCCAGGCCCGCCCAAGGTTTGAGCCCGGCCTCGGCAGGTCCTaGTGTGGGGCTTTGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GPVSPQPAQLQARPRFEPGLGRS*CGALVS Trigger: GGAGACCAAAGCCCCACACCAGGACCTGCCGAGGCC...GGGCTCAAACCTTGGGCGGGCCTGGAGTTGTGCGGGTTGTGGTGACACTGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR TCA 90 bp | CATTCCCCTCTGTTCACTGGCCTCTGGCCGTGGACATGTGATGGCCTGTACCCAGAGCTCCGCTGTGCGTaGGGCGGTGCGCAGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: HSPLFTGLWPWTCDGLYPELRCA*GGAQPA Trigger: AGCTGGCTGCGCACCGCCTCACGCACAGCGGAGCTC...TGGGTACAGGCCATCACATGTCCACGGCCAGAGGCCAGTGAACAGAGGGGAATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR TCA 90 bp | TGTCACCACAACCCGCACAACTCCAGGCCCGCCCAAGGTTTGAGCCCAGCACCACTCTGGCCAAAGGCCTaGTTGCAGCTGGAGCATCGG | + |
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Preference number: 4 (lower is better) Translates to: CHHNPHNSRPAQGLSPAPLWPKA*LQLEHR Trigger: CCGATGCTCCAGCTGCAATCAGGCCTTTGGCCAGAG...TGGTGCTGGGCTCAAACCTTGGGCGGGCCTGGAGTTGTGCGGGTTGTGGTGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR GCA 90 bp | GGACCCACACAGAGGCTCACAACTATTCCTAATATTCCAGGGGATCTGAGCCCCGGGCGAGCTCCGCTGTaGGTGAGGCGGTGCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GPTQRLTTIPNIPGDLSPGRAPL*VRRCAA Trigger: GGCTGCGCACCGCCTCACGCACAGCGGAGCTCGCCC...GGGGCTCAGATCCCCTGGAATATTAGGAATAGTTGTGAGCCTCTGTGTGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR GCA 90 bp | AGCCCATCGGCCGAGTTGACGTCACGGGGAAGGCAGAGCACAAGTAGTCATAAGGTAGGGACGGGCGGGTaGGTGCGTCCAGAGATGCGC | + |
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Preference number: 4 (lower is better) Translates to: SPSAELTSRGRQSTSSHKVGTGG*VRPEMR Trigger: GCGCATCTCTGGACGCACGCACCCGCCCGTCCCTAC...CTTATGACTACTTGTGCTCTGCCTTCCCCGTGACGTCAACTCGGCCGATGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | TGTCACCACAACCCGCACAACTCCAGGCCCGCCCAAGGTTTGAGCCCAGCACCAGGTGCGTGGCCAGCTTaGATGGGTACGAGAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: CHHNPHNSRPAQGLSPAPGAWPA*MGTRRP Trigger: AGGCCTTCTCGTACCCATCCAAGCTGGCCACGCACC...TGGTGCTGGGCTCAAACCTTGGGCGGGCCTGGAGTTGTGCGGGTTGTGGTGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | AGCACTTGTTGCTTAGCAGAGGGACTGGGTTCTTGTCCTAGGACCCACACAGAGAGGGGCGGGCGTCGGTaGCGTGGTGCGTGTGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: STCCLAEGLGSCPRTHTERGGRR*RGACGG Trigger: ACCGCCACACGCACCACGCCACCGACGCCCGCCCCT...CTCTGTGTGGGTCCTAGGACAAGAACCCAGTCCCTCTGCTAAGCAACAAGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | AGCCCATCGGCCGAGTTGACGTCACGGGGAAGGCAGAGCACAAGTAGTCATAAGGCGCTAGCCGGTGCGTaGCCAGCTTGGATGGGTACG | + |
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Preference number: 4 (lower is better) Translates to: SPSAELTSRGRQSTSSHKALAGA*PAWMGT Trigger: CGTACCCATCCAAGCTGGCCACGCACCGGCTAGCGC...CTTATGACTACTTGTGCTCTGCCTTCCCCGTGACGTCAACTCGGCCGATGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | GCAGAGGGACTGGGTTCTTGTCCTAGGACCCACACAGAGGCTCACAACTATTCCTGGTGCGTGTGGCGGTaGGCCGCCAACTTGGACGGG | + |
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Preference number: 4 (lower is better) Translates to: AEGLGSCPRTHTEAHNYSWCVWR*AANLDG Trigger: CCCGTCCAAGTTGGCGGCCCACCGCCACACGCACCA...GGAATAGTTGTGAGCCTCTGTGTGGGTCCTAGGACAAGAACCCAGTCCCTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | CATTCCCCTCTGTTCACTGGCCTCTGGCCGTGGACATGTGATGGCCTGTACCCACAGCTGGAGCATCGGTaGCTGCCAGTAGCCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HSPLFTGLWPWTCDGLYPQLEHR*LPVAWL Trigger: CAGCCAGGCTACTGGCAGCCACCGATGCTCCAGCTG...TGGGTACAGGCCATCACATGTCCACGGCCAGAGGCCAGTGAACAGAGGGGAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | CACGGGGAAGGCAGAGCACAAGTAGTCATAAGATACCCTTGGCACATGCGCAGAGTGGCGTGGTGCGTGTaGCGGTGGGCCGCCAACTTG | + |
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Preference number: 4 (lower is better) Translates to: HGEGRAQVVIRYPWHMRRVAWCV*RWAANL Trigger: CAAGTTGGCGGCCCACCGCCACACGCACCACGCCAC...TCTGCGCATGTGCCAAGGGTATCTTATGACTACTTGTGCTCTGCCTTCCCCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | CACGGGGAAGGCAGAGCACAAGTAGTCATAAGATACCCTTGGCACATGCGCAGAGGTGGGCCGCCAACTTaGACGGGTAGCAGAAGGACT | + |
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Preference number: 4 (lower is better) Translates to: HGEGRAQVVIRYPWHMRRGGPPT*TGSRRT Trigger: AGTCCTTCTGCTACCCGTCCAAGTTGGCGGCCCACC...TCTGCGCATGTGCCAAGGGTATCTTATGACTACTTGTGCTCTGCCTTCCCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR CAA 72 bp | CCTCAGGTCCCCAAGAGATTCAGAGGCACTGCAGCCTaGAGCTCTCCAGTAGATGTGCCCTTGGTTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: PQVPKRFRGTAA*SSPVDVPLVLP Trigger: AGGCAGAACCAAGGGCACATCTACTGGAGAGCTCAAGGCTGCAGTGCCTCTGAATCTCTTGGGGACCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR CAA 72 bp | ACCGCAGTGAACATCCCTGATGCCTTTATCACAGGCTaGAGTGTTCAGGGCCAGTGTCACCACAACCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: TAVNIPDAFITG*SVQGQCHHNPH Trigger: GTGCGGGTTGTGGTGACACTGGCCCTGAACACTCAAGCCTGTGATAAAGGCATCAGGGATGTTCACTGCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR TCA 90 bp | ACCCTGGGTACATATCTAGACCACCAGGCTTTGGAAGGCTACCAGAAAAGTTCCTTGGTCTCCGGGTCCTaGCAGGTGGGACTAGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: TLGTYLDHQALEGYQKSSLVSGS*QVGLGS Trigger: GGAACCTAGTCCCACCTGTCAGGACCCGGAGACCAA...GGAACTTTTCTGGTAGCCTTCCAAAGCCTGGTGGTCTAGATATGTACCCAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR GCA 90 bp | CACACCTACAGGCACCAGGCACAAATGTGCATATACATAATGCAGAGAAAACACCCGTGCGCTAGCCGGTaGGTGGCCAGCTTGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: HTYRHQAQMCIYIMQRKHPCASR*VASLDG Trigger: CCCATCCAAGCTGGCCACGCACCGGCTAGCGCACGG...GTGTTTTCTCTGCATTATGTATATGCACATTTGTGCCTGGTGCCTGTAGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | TCCACACATACAGCAGGGCTTAGAAATTCCAGGTCTTTATTGACAGGTGATGGAGGTGGCCGAAGGCCTTaGGGCAGTGCGGGCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: STHTAGLRNSRSLLTGDGGGRRP*GSAGRS Trigger: ACTCCTGCCCGCACTGCCCCAAGGCCTTCGGCCACC...TCCATCACCTGTCAATAAAGACCTGGAATTTCTAAGCCCTGCTGTATGTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | CTTGTCCTAGGACCCACACAGAGGCTCACAACTATTCCTAATATTCCAGGGGATGATGCGCCGCCAGTTTaGAACGGTGGCCGAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LVLGPTQRLTTIPNIPGDDAPPV*NGGRRP Trigger: AGGCCTTCGGCCACCGTTCCAAACTGGCGGCGCATC...ATCCCCTGGAATATTAGGAATAGTTGTGAGCCTCTGTGTGGGTCCTAGGACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | AATGTGGGCGCGGCTCCCAACATCTTACACTTGTTCTTGCATATAAACCTAGCATGGCTGCCAGTAGCCTaGCTGCTGGGCGCAGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: NVGAAPNILHLFLHINLAWLPVA*LLGAVG Trigger: CCCAACTGCGCCCAGCAGCCAGGCTACTGGCAGCCA...TGCTAGGTTTATATGCAAGAACAAGTGTAAGATGTTGGGAGCCGCGCCCACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | TCCACACATACAGCAGGGCTTAGAAATTCCAGGTCTTTATTGACAGGTGATGGACGGCAGGTCCTGGTGTaGGGCTTTGGTCTCCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: STHTAGLRNSRSLLTGDGRQVLV*GFGLRV Trigger: GACCCGGAGACCAAAGCCCCACACCAGGACCTGCCG...TCCATCACCTGTCAATAAAGACCTGGAATTTCTAAGCCCTGCTGTATGTGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | GGGGATAGAATCCCTCAACCTTCTAAATCAGATTCCTGCAGAACCAATAATCCCGGTGCGCAGCCAGCTTaGACGGGTAGGAGAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GDRIPQPSKSDSCRTNNPGAQPA*TGRRRP Trigger: AGGCCTTCTCCTACCCGTCCAAGCTGGCTGCGCACC...GGGATTATTGGTTCTGCAGGAATCTGATTTAGAAGGTTGAGGGATTCTATCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR GCA 90 bp | CTGTTAGAGGGAAGTCCACACATACAGCAGGGCTTAGAAATTCCAGGTCTTTATGGCCAAAGGCCTGATTaGAGCTGGAGCATCGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LLEGSPHIQQGLEIPGLYGQRPD*SWSIGG Trigger: GCCACCGATGCTCCAGCTGCAATCAGGCCTTTGGCC...ATAAAGACCTGGAATTTCTAAGCCCTGCTGTATGTGTGGACTTCCCTCTAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | GGGGATAGAATCCCTCAACCTTCTAAATCAGATTCCTGCAGAACCAATAATCCCGGTAGCAGAAGGACTTaGGGCAATCGGGGCACGGGT | + |
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Preference number: 4 (lower is better) Translates to: GDRIPQPSKSDSCRTNNPGSRRT*GNRGTG Trigger: ACCCGTGCCCCGATTGCCCCAAGTCCTTCTGCTACC...GGGATTATTGGTTCTGCAGGAATCTGATTTAGAAGGTTGAGGGATTCTATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | TGGAGACGGGAGACCTCATCACAAAACAAACATCCCACAAACCCAAAGTGCTTTGAAACGAGAACGCTTTaGGGCAGTGCGGGCAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: WRRETSSQNKHPTNPKCFETRTL*GSAGKG Trigger: ACCCTTGCCCGCACTGCCCCAAAGCGTTCTCGTTTC...AAAGCACTTTGGGTTTGTGGGATGTTTGTTTTGTGATGAGGTCTCCCGTCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CCA 90 bp | ACCCTGGGTACATATCTAGACCACCAGGCTTTGGAAGGCTACCAGAAAAGTTCCGATGGGCCGCCAGTTTaGAAGGAAACGAGAACGCTT | + |
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Preference number: 4 (lower is better) Translates to: TLGTYLDHQALEGYQKSSDGPPV*KETRTL Trigger: AAGCGTTCTCGTTTCCTTCCAAACTGGCGGCCCATC...GGAACTTTTCTGGTAGCCTTCCAAAGCCTGGTGGTCTAGATATGTACCCAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR CAA 72 bp | CAAACCACCCTGGGTACATATCTAGACCACCAGGCTTaGGAAGGCTACCAGAAAAGTTCCAGTCCAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: QTTLGTYLDHQA*EGYQKSSSPAW Trigger: CCAAGCTGGACTGGAACTTTTCTGGTAGCCTTCCAAAGCCTGGTGGTCTAGATATGTACCCAGGGTGGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| 3UTR CAA 72 bp | ACGGCGAATGTGGGCGCGGCTCCCAACATCTTACACTaGTTCTTGCATATAAACCTAGCATGTGTGTTGATA | + |
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Preference number: 4 (lower is better) Translates to: TANVGAAPNILH*FLHINLACVLI Trigger: TATCAACACACATGCTAGGTTTATATGCAAGAACAAGTGTAAGATGTTGGGAGCCGCGCCCACATTCGCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS CCA 90 bp | GCCGGCGGGGCCGGGAGGGCACGCTCCCAGAGGCAGCGGGCTGGTTaGGCCTCGGCAGGTCCTGGTGTGGGGCTTTGGTCTCCGGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: AGGAGRARSQRQRAG*ASAGPGVGLWSPGP Trigger: AGGACCCGGAGACCAAAGCCCCACACCAGGACCTGCCGAGGCCCAACCAGCCCGCTGCCTCTGGGAGCGTGCCCTCCCGGCCCCGCCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS CCA 90 bp | GCTCCCAGAGGCAGCGGGCTGGTTGGGCCTCGGCAGGTCCTGGTGTaGGGCTTTGGTCTCCGGGTCCTGACAGGTGGGACTAGGTTCCGA | + |
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Preference number: 5 (lower is better) Translates to: APRGSGLVGPRQVLV*GFGLRVLTGGTRFR Trigger: TCGGAACCTAGTCCCACCTGTCAGGACCCGGAGACCAAAGCCCCACACCAGGACCTGCCGAGGCCCAACCAGCCCGCTGCCTCTGGGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS TCA 90 bp | TTGGGCCTCGGCAGGTCCTGGTGTGGGGCTTTGGTCTCCGGGTCCTaGCAGGTGGGACTAGGTTCCGAGGCCCTGACCTCGGACTTCACG | + |
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Preference number: 5 (lower is better) Translates to: LGLGRSWCGALVSGS*QVGLGSEALTSDFT Trigger: CGTGAAGTCCGAGGTCAGGGCCTCGGAACCTAGTCCCACCTGTCAGGACCCGGAGACCAAAGCCCCACACCAGGACCTGCCGAGGCCCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS CCA 90 bp | GCTGGAGCATCGGTGGCTGCCAGTAGCCTGGCTGCTGGGCGCAGTTaGGGGGTCGTGGCACAGACGATGGGCCGCCAGTTTGGAAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: AGASVAASSLAAGRS*GVVAQTMGRQFGRK Trigger: TTTCCTTCCAAACTGGCGGCCCATCGTCTGTGCCACGACCCCCCAACTGCGCCCAGCAGCCAGGCTACTGGCAGCCACCGATGCTCCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CAA 90 bp | AGCACTTGTTGCTTAGCAGAGGGACTGGGTTCTTGTCCTAGGACCCACACAGAGGGGTACGAGAAGGCCTaGGGGCAATCCGGGCAGCGG | + |
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Preference number: 5 (lower is better) Translates to: STCCLAEGLGSCPRTHTEGYEKA*GQSGQR Trigger: CCGCTGCCCGGATTGCCCCAAGGCCTTCTCGTACCC...CTCTGTGTGGGTCCTAGGACAAGAACCCAGTCCCTCTGCTAAGCAACAAGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CAA 90 bp | CACGGGGAAGGCAGAGCACAAGTAGTCATAAGATACCCTTGGCACATGCGCAGAAGATGCGCCGCCAGTTaGGAACGGTGGCCGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: HGEGRAQVVIRYPWHMRRRCAAS*ERWPKA Trigger: GGCCTTCGGCCACCGTTCCAAACTGGCGGCGCATCT...TCTGCGCATGTGCCAAGGGTATCTTATGACTACTTGTGCTCTGCCTTCCCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CAA 90 bp | GGGGATAGAATCCCTCAACCTTCTAAATCAGATTCCTGCAGAACCAATAATCCCCGGTGCGTGGCCAGCTaGGATGGGTACGAGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GDRIPQPSKSDSCRTNNPRCVAS*DGYEKA Trigger: GGCCTTCTCGTACCCATCCAAGCTGGCCACGCACCG...GGGATTATTGGTTCTGCAGGAATCTGATTTAGAAGGTTGAGGGATTCTATCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS-3UTR CAA 90 bp | TGGAGACGGGAGACCTCATCACAAAACAAACATCCCACAAACCCAAAGTGCTTTGGAAACGAGAACGCTTaGGGGCAGTGCGGGCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: WRRETSSQNKHPTNPKCFGNENA*GQCGQG Trigger: CCCTTGCCCGCACTGCCCCAAAGCGTTCTCGTTTCC...AAAGCACTTTGGGTTTGTGGGATGTTTGTTTTGTGATGAGGTCTCCCGTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS CCA 72 bp | GGCAGCGGGCTGGTTGGGCCTCGGCAGGTCCTGGTGTaGGGCTTTGGTCTCCGGGTCCTGACAGGTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: GSGLVGPRQVLV*GFGLRVLTGGT Trigger: AGTCCCACCTGTCAGGACCCGGAGACCAAAGCCCCACACCAGGACCTGCCGAGGCCCAACCAGCCCGCTGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS CCA 72 bp | TCGGTGGCTGCCAGTAGCCTGGCTGCTGGGCGCAGTTaGGGGGTCGTGGCACAGACGATGGGCCGCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: SVAASSLAAGRS*GVVAQTMGRQF Trigger: AAACTGGCGGCCCATCGTCTGTGCCACGACCCCCCAACTGCGCCCAGCAGCCAGGCTACTGGCAGCCACCGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS TCA 72 bp | GGCAGGTCCTGGTGTGGGGCTTTGGTCTCCGGGTCCTaGCAGGTGGGACTAGGTTCCGAGGCCCTGACCTCG | + |
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Preference number: 6 (lower is better) Translates to: GRSWCGALVSGS*QVGLGSEALTS Trigger: CGAGGTCAGGGCCTCGGAACCTAGTCCCACCTGTCAGGACCCGGAGACCAAAGCCCCACACCAGGACCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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| CDS GCA 72 bp | ACTCCCGCTCTCCCTGGCCCTCCGACTGGTGGTGGCTaGGTTGGTGAACCAGCAGGAGGCGTCTCTGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: TPALPGPPTGGG*VGEPAGGVSGQ Trigger: TTGGCCAGAGACGCCTCCTGCTGGTTCACCAACGCAGCCACCACCAGTCGGAGGGCCAGGGAGAGCGGGAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094705.3 |
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