Pregenerated sensors for ZFP568 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074221Ensembl transcript IDs: ENSMUST00000074322.12, ENSMUST00000146074.8, ENSMUST00000148442.8, ENSMUST00000177931.2, ENSMUST00000207940.2
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGTCTCAGCCTCAGAAAGCAGGCACCACCTGGTGGCACAGATGTaGTCCCTGCAGCCGGGAAGACCATGCCCCTGGATCTTGTTACTA | + |
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Preference number: 1 (lower is better) Translates to: AVSASESRHHLVAQM*SLQPGRPCPWILLL Trigger: TAGTAACAAGATCCAGGGGCATGGTCTTCCCGGCTGCAGGGAGCACATCTGTGCCACCAGGTGGTGCCTGCTTTCTGAGGCTGAGACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR GCA 90 bp | CTGCTAATCTCTCGGACACACACACTGCCCTCCTCAGCTTGTCCCTaGTATGAATCCCGAGGCCTGCTTGTTTGGCTCCAGGCCACTGAG | + |
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Preference number: 1 (lower is better) Translates to: LLISRTHTLPSSACP*YESRGLLVWLQATE Trigger: CTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCGGGATTCATAGCAGGGACAAGCTGAGGAGGGCAGTGTGTGTGTCCGAGAGATTAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
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| 3UTR GCA 90 bp | ACACACTGCCCTCCTCAGCTTGTCCCTGCTATGAATCCCGAGGCCTaGTTGTTTGGCTCCAGGCCACTGAGAGGCATTCCTCCTTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: THCPPQLVPAMNPEA*LFGSRPLRGIPPSF Trigger: AAAGGAAGGAGGAATGCCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCGGGATTCATAGCAGGGACAAGCTGAGGAGGGCAGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
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| 3UTR CCA 90 bp | CCCTCCTCAGCTTGTCCCTGCTATGAATCCCGAGGCCTGCTTGTTTaGCTCCAGGCCACTGAGAGGCATTCCTCCTTCCTTTACATTCAT | + |
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Preference number: 1 (lower is better) Translates to: PSSACPCYESRGLLV*LQATERHSSFLYIH Trigger: ATGAATGTAAAGGAAGGAGGAATGCCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCGGGATTCATAGCAGGGACAAGCTGAGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
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| 3UTR GCA 90 bp | ACAAGTTGCACCCATGCCCACATGCTGCCTGACCTCTGTCACAACTaGTCTGCCGGAGCCTGTTTAGTAATTAGCAGCTTTCCCTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: TSCTHAHMLPDLCHN*SAGACLVISSFPSS Trigger: TGAGGAGGGAAAGCTGCTAATTACTAAACAGGCTCCGGCAGAGCAGTTGTGACAGAGGTCAGGCAGCATGTGGGCATGGGTGCAACTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR GCA 90 bp | CCCTTAGGACATTACCACGTGAGGAAAGGAGCCTGCATCCCTGTGTaGGCACAATCCCACTCAATACACTCTTCCTCACCCAACCCGTTA | + |
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Preference number: 1 (lower is better) Translates to: PLGHYHVRKGACIPV*AQSHSIHSSSPNPL Trigger: TAACGGGTTGGGTGAGGAAGAGTGTATTGAGTGGGATTGTGCGCACACAGGGATGCAGGCTCCTTTCCTCACGTGGTAATGTCCTAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR TCA 90 bp | TCCTCACTCAGAGGCTTTAGCAATTCCTCCAGCCCCTTCTCATACTaGCCTCACCACATTCCAGTTCTGACGCTTCTGACCAGCAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: SSLRGFSNSSSPFSY*PHHIPVLTLLTSRR Trigger: CCTTCTGCTGGTCAGAAGCGTCAGAACTGGAATGTGGTGAGGTCAGTATGAGAAGGGGCTGGAGGAATTGCTAAAGCCTCTGAGTGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
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| 3UTR TCA 90 bp | TCCAGGAGAAGGCGAGGTCATGGTTCCATGACACCACAATGTCGGTaGCAATGTGTGTTCTATGGCAGTCTCAGCCTCAGAAAGCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: SRRRRGHGSMTPQCR*QCVFYGSLSLRKQA Trigger: TGCCTGCTTTCTGAGGCTGAGACTGCCATAGAACACACATTGTCACCGACATTGTGGTGTCATGGAACCATGACCTCGCCTTCTCCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR TCA 90 bp | GGAAGGCACACTTGCAGGCTCGATGTGGCCAGCTGCTTGTCTCTGTaGATGTTTTATTGCTACACAGTGGTATCCCATTCTGTTCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: GRHTCRLDVASCLSL*MFYCYTVVSHSVLA Trigger: GGCCAGAACAGAATGGGATACCACTGTGTAGCAATAAAACATTCACAGAGACAAGCAGCTGGCCACATCGAGCCTGCAAGTGTGCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR GCA 90 bp | GAAGGACAAGGACCTTCACAGCAGGCTCTGCTAGTCTCCAGTGACTaGAGAGTCCTCTCTCACTCACTCATTAGCACTTCAACCAAAGTC | + |
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Preference number: 1 (lower is better) Translates to: EGQGPSQQALLVSSD*RVLSHSLISTSTKV Trigger: GACTTTGGTTGAAGTGCTAATGAGTGAGTGAGAGAGGACTCTGCAGTCACTGGAGACTAGCAGAGCCTGCTGTGAAGGTCCTTGTCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR GCA 90 bp | ACAATTCACAGAAACAAAGCTCAAATGACCTGCAGGCCAGGGAGATaGTCCACCTCCCTAGCAGTCGAGGAAGTGCAAACAGAAGGCACA | + |
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Preference number: 1 (lower is better) Translates to: TIHRNKAQMTCRPGR*STSLAVEEVQTEGT Trigger: TGTGCCTTCTGTTTGCACTTCCTCGACTGCTAGGGAGGTGGAGCATCTCCCTGGCCTGCAGGTCATTTGAGCTTTGTTTCTGTGAATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR CCA 90 bp | GATGGTGAAGCTAACATTTGCTGGGAAGAAGAGGCTGCACACACATaGCTTGTCTATGGTGAGATCGTTAGAGCGGTGAGTAGTGACGAG | + |
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Preference number: 1 (lower is better) Translates to: DGEANICWEEEAAHT*LVYGEIVRAVSSDE Trigger: CTCGTCACTACTCACCGCTCTAACGATCTCACCATAGACAAGCCATGTGTGTGCAGCCTCTTCTTCCCAGCAAATGTTAGCTTCACCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR GCA 90 bp | CAACTTGTGATCCTCCCTCCTACCTTTGGCTTCAGATGCTCATATTaGGTGGAACAGCATGCCTGCTGCACTTGGCACACTTTAGATACT | + |
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Preference number: 1 (lower is better) Translates to: QLVILPPTFGFRCSY*VEQHACCTWHTLDT Trigger: AGTATCTAAAGTGTGCCAAGTGCAGCAGGCATGCTGTTCCACGCAATATGAGCATCTGAAGCCAAAGGTAGGAGGGAGGATCACAAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
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| 3UTR CCA 90 bp | CTTGTGTCCCGAACTCACATTGCTGATGGTGAAGCTAACATTTGCTaGGAAGAAGAGGCTGCACACACATGGCTTGTCTATGGTGAGATC | + |
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Preference number: 1 (lower is better) Translates to: LVSRTHIADGEANIC*EEEAAHTWLVYGEI Trigger: GATCTCACCATAGACAAGCCATGTGTGTGCAGCCTCTTCTTCCCAGCAAATGTTAGCTTCACCATCAGCAATGTGAGTTCGGGACACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR CCA 90 bp | AATGCTACTAAAACCAGGTGGGAAGGCACACTTGCAGGCTCGATGTaGCCAGCTGCTTGTCTCTGTGAATGTTTTATTGCTACACAGTGG | + |
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Preference number: 1 (lower is better) Translates to: NATKTRWEGTLAGSM*PAACLCECFIATQW Trigger: CCACTGTGTAGCAATAAAACATTCACAGAGACAAGCAGCTGGCCACATCGAGCCTGCAAGTGTGCCTTCCCACCTGGTTTTAGTAGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR CCA 90 bp | GGCTTCAGATGCTCATATTGCGTGGAACAGCATGCCTGCTGCACTTaGCACACTTTAGATACTAGCTGGATGCTATTCCACAATCTACAC | + |
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Preference number: 1 (lower is better) Translates to: GFRCSYCVEQHACCT*HTLDTSWMLFHNLH Trigger: GTGTAGATTGTGGAATAGCATCCAGCTAGTATCTAAAGTGTGCCAAGTGCAGCAGGCATGCTGTTCCACGCAATATGAGCATCTGAAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
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| 3UTR TCA 90 bp | ATTTCTTATTCTGTAGGTCCAGGAGAAGGCGAGGTCATGGTTCCATaGCACCACAATGTCGGTGACAATGTGTGTTCTATGGCAGTCTCA | + |
|
Preference number: 1 (lower is better) Translates to: ISYSVGPGEGEVMVP*HHNVGDNVCSMAVS Trigger: TGAGACTGCCATAGAACACACATTGTCACCGACATTGTGGTGTCATGGAACCATGACCTCGCCTTCTCCTGGACCTACAGAATAAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR TCA 90 bp | TGTTTGTTTGTTTTACTAGAGAGTCTCCAAGCTAGCCTCAACTTGTaGTCCTCCCTCCTACCTTTGGCTTCAGATGCTCATATTGCGTGG | + |
|
Preference number: 1 (lower is better) Translates to: CLFVLLESLQASLNL*SSLLPLASDAHIAW Trigger: CCACGCAATATGAGCATCTGAAGCCAAAGGTAGGAGGGAGGATCACAAGTTGAGGCTAGCTTGGAGACTCTCTAGTAAAACAAACAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
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| 3UTR CCA 90 bp | TCAGAAACAAAACTAATAATACAGATAAATGCTACTAAAACCAGGTaGGAAGGCACACTTGCAGGCTCGATGTGGCCAGCTGCTTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: SETKLIIQINATKTR*EGTLAGSMWPAACL Trigger: GAGACAAGCAGCTGGCCACATCGAGCCTGCAAGTGTGCCTTCCCACCTGGTTTTAGTAGCATTTATCTGTATTATTAGTTTTGTTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR CCA 90 bp | ATGATGGGCAGGGCGGGGCAGATGAGCTCCAGGAGAGAGCAGACCAAGAGGAAGGCAGGCACCACCTGGTaGCACAGATGTGCTCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: MMGRAGQMSSRREQTKRKAGTTW*HRCAPC Trigger: GCAGGGAGCACATCTGTGCCACCAGGTGGTGCCTGC...CTTCCTCTTGGTCTGCTCTCTCCTGGAGCTCATCTGCCCCGCCCTGCCCATCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR TCA 90 bp | CATGCCCACATGCTGCCTGACCTCTGTCACAACTGCTCTGCCGGAGCCTGTTTAGCAGGGCGGGGCAGATaGGCTCCAGGAGAGAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: HAHMLPDLCHNCSAGACLAGRGR*APGESR Trigger: TCTGCTCTCTCCTGGAGCTCATCTGCCCCGCCCTGC...TAAACAGGCTCCGGCAGAGCAGTTGTGACAGAGGTCAGGCAGCATGTGGGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCCCACATGCTGCCTGACCTCTGTCACAACTGCTCTGCCGGAGCCTGTTTAGGGCTGGCCCGGGTGTaGGTGTGGAAAGGTTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: HAHMLPDLCHNCSAGACLGLARV*VWKGSN Trigger: GTTGGAACCTTTCCACACCCACACCCGGGCCAGCCC...TAAACAGGCTCCGGCAGAGCAGTTGTGACAGAGGTCAGGCAGCATGTGGGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTTGGCCAGTGGGATGCTGGACCAGTCAGTAAGGCACCTGCTGTGCAAGCCGTTGCGTGGAACAGCATaGCTGCTGCACTTGGCACAC | + |
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Preference number: 2 (lower is better) Translates to: SLASGMLDQSVRHLLCKPLRGTA*LLHLAH Trigger: GTGTGCCAAGTGCAGCAGGCATGCTGTTCCACGCAA...CGGCTTGCACAGCAGGTGCCTTACTGACTGGTCCAGCATCCCACTGGCCAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR CAA 90 bp | CACTGCCCTCCTCAGCTTGTCCCTGCTATGAATCCCGAGGCCTGCTaGTTTGGCTCCAGGCCACTGAGAGGCATTCCTCCTTCCTTTACA | + |
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Preference number: 2 (lower is better) Translates to: HCPPQLVPAMNPEAC*FGSRPLRGIPPSFT Trigger: TGTAAAGGAAGGAGGAATGCCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCGGGATTCATAGCAGGGACAAGCTGAGGAGGGCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTTGGCCAGTGGGATGCTGGACCAGTCAGTAAGGCACCTGCTGTGCAAGCCGTCTGCTAGTCTCCAGTaGCTGCAGAGTCCTCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SLASGMLDQSVRHLLCKPSASLQ*LQSPLS Trigger: TGAGAGAGGACTCTGCAGTCACTGGAGACTAGCAGA...CGGCTTGCACAGCAGGTGCCTTACTGACTGGTCCAGCATCCCACTGGCCAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGGCCAGTGGGATGCTGGACCAGTCAGTAAGGCACCTGCTGTGCAAGCCGGTCTCAGCTGTCAAGTaGCTCAGTGTTAGGGGAACG | + |
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Preference number: 2 (lower is better) Translates to: SLASGMLDQSVRHLLCKPVSAVK*LSVRGT Trigger: CGTTCCCCTAACACTGAGCCACTTGACAGCTGAGAC...CGGCTTGCACAGCAGGTGCCTTACTGACTGGTCCAGCATCCCACTGGCCAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR GCA 90 bp | ATGATGGGCAGGGCGGGGCAGATGAGCTCCAGGAGAGAGCAGACCAAGAGGAAGCTGTACAACACTGTGTaGGTCTCACCTATTCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: MMGRAGQMSSRREQTKRKLYNTV*VSPIPR Trigger: CCTTGGAATAGGTGAGACGCACACAGTGTTGTACAG...CTTCCTCTTGGTCTGCTCTCTCCTGGAGCTCATCTGCCCCGCCCTGCCCATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGCTGATGGTGAAGCTAACATTTGCTGGGAAGAAGAGGCTGCACACACATGGCCCTCCTCATTGAGATaGTGGGCAGGGCGGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: IADGEANICWEEEAAHTWPSSLR*WAGRGR Trigger: TCTGCCCCGCCCTGCCCATCATCTCAATGAGGAGGG...CCATGTGTGTGCAGCCTCTTCTTCCCAGCAAATGTTAGCTTCACCATCAGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTTGGCCAGTGGGATGCTGGACCAGTCAGTAAGGCACCTGCTGTGCAAGCCGTCAACCAAAGTCCTTTaGACAAAGCACCACACCGCT | + |
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Preference number: 2 (lower is better) Translates to: SLASGMLDQSVRHLLCKPSTKVL*TKHHTA Trigger: AGCGGTGTGGTGCTTTGTGCAAAGGACTTTGGTTGA...CGGCTTGCACAGCAGGTGCCTTACTGACTGGTCCAGCATCCCACTGGCCAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR GCA 90 bp | GACCTGCAGGCCAGGGAGATGCTCCACCTCCCTAGCAGTCGAGGAAGTGCAAACGTAGAACCTATGCTCTaGTCATTCAAGCCTTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: DLQAREMLHLPSSRGSANVEPML*SFKPCF Trigger: GAAACAAGGCTTGAATGAGCAGAGCATAGGTTCTAC...GTTTGCACTTCCTCGACTGCTAGGGAGGTGGAGCATCTCCCTGGCCTGCAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR CCA 90 bp | GACCTGCAGGCCAGGGAGATGCTCCACCTCCCTAGCAGTCGAGGAAGTGCAAACCTCTCTATGGAGGCTTaGGTCTTAGCTAAAGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: DLQAREMLHLPSSRGSANLSMEA*VLAKAL Trigger: TAAAGCTTTAGCTAAGACCCAAGCCTCCATAGAGAG...GTTTGCACTTCCTCGACTGCTAGGGAGGTGGAGCATCTCCCTGGCCTGCAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR TCA 90 bp | GGCACAGATGTGCTCCCTGCAGCCGGGAAGACCATGCCCCTGGATCTTGTTACTGTAAATAACCTGCCCTaGATCATGAGGACATGTAAA | + |
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Preference number: 2 (lower is better) Translates to: GTDVLPAAGKTMPLDLVTVNNLP*IMRTCK Trigger: TTTACATGTCCTCATGATTCAGGGCAGGTTATTTAC...AGTAACAAGATCCAGGGGCATGGTCTTCCCGGCTGCAGGGAGCACATCTGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR GCA 90 bp | AGCACTTCAACCAAAGTCCTTTGCACAAAGCACCACACCGCTCAATTACTGGGCCCTCTGCCTCCCAAGTaGTGGGATAAAAGGTATGCG | + |
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Preference number: 2 (lower is better) Translates to: STSTKVLCTKHHTAQLLGPLPPK*WDKRYA Trigger: CGCATACCTTTTATCCCAGCACTTGGGAGGCAGAGG...GCCCAGTAATTGAGCGGTGTGGTGCTTTGTGCAAAGGACTTTGGTTGAAGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR GCA 90 bp | AGCACTTCAACCAAAGTCCTTTGCACAAAGCACCACACCGCTCAATTACTGGGCAAATCTGCCTGCCTCTaGCTCCCAAGTGCTGGGATA | + |
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Preference number: 2 (lower is better) Translates to: STSTKVLCTKHHTAQLLGKSACL*LPSAGI Trigger: TATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTT...GCCCAGTAATTGAGCGGTGTGGTGCTTTGTGCAAAGGACTTTGGTTGAAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR GCA 90 bp | TGCAAACAGAAGGCACATTTTCAGCCCTGGCTAACACAGTTGAGAAACACACACGGCCTCCACACAAGTTaGACCCATGCCCACATGCTG | + |
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Preference number: 2 (lower is better) Translates to: CKQKAHFQPWLTQLRNTHGLHTS*THAHML Trigger: CAGCATGTGGGCATGGGTGCAACTTGTGTGGAGGCC...GTGTGTGTTTCTCAACTGTGTTAGCCAGGGCTGAAAATGTGCCTTCTGTTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR CCA 90 bp | TATGAATCCCGAGGCCTGCTTGTTTGGCTCCAGGCCACTGAGAGGCATTCCTCCGCCCCCTCCAATTTCTaGAGTTATAAGGTTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: YESRGLLVWLQATERHSSAPSNF*SYKVSF Trigger: GAAAGAAACCTTATAACTCCAGAAATTGGAGGGGGC...GGAGGAATGCCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCGGGATTCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTGTACAACACTGTGTGCGTCTCACCTATTCCAAGGTTTAGTTTTGCCAAGTCTCGGACACACACACTaGCCTCCTCAGCTTGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SCTTLCASHLFQGLVLPSLGHTH*PPQLVP Trigger: AGGGACAAGCTGAGGAGGGCAGTGTGTGTGTCCGAG...ACTTGGCAAAACTAAACCTTGGAATAGGTGAGACGCACACAGTGTTGTACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR GCA 90 bp | TGCAAACAGAAGGCACATTTTCAGCCCTGGCTAACACAGTTGAGAAACACACACGCTCCTGTGAGACCCTaGATCAGAAAACTGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: CKQKAHFQPWLTQLRNTHAPVRP*IRKLKP Trigger: TGGCTTCAGTTTTCTGATGCAGGGTCTCACAGGAGC...GTGTGTGTTTCTCAACTGTGTTAGCCAGGGCTGAAAATGTGCCTTCTGTTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCCTCCAGTTACTGGACATATAAGGCTTTCCTCTTTAAGACTGTTAAAGTTTCGAGGCCTGCTTGTTTaGCTCCAGGCCACTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VPPVTGHIRLSSLRLLKFRGLLV*LQATER Trigger: CCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCG...AAACTTTAACAGTCTTAAAGAGGAAAGCCTTATATGTCCAGTAACTGGAGGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTGTCTGCATTTCTTATTCTGTAGGTCCAGGAGAAGGCGAGGTCATGGTTAACACTGCAGGAGCATaGCTAACATCTGTCGACAGG | + |
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Preference number: 2 (lower is better) Translates to: FSVCISYSVGPGEGEVMVNTAGA*LTSVDR Trigger: CCTGTCGACAGATGTTAGCCATGCTCCTGCAGTGTT...AACCATGACCTCGCCTTCTCCTGGACCTACAGAATAAGAAATGCAGACACTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR CCA 90 bp | TTATATAGGCATTTAACACTCTCTATGGAGGCTTGGGTCTTAGCTAAAGCTTTACGAGGCCTGCTTGTTTaGCTCCAGGCCACTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LYRHLTLSMEAWVLAKALRGLLV*LQATER Trigger: CCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCG...TAAAGCTTTAGCTAAGACCCAAGCCTCCATAGAGAGTGTTAAATGCCTATATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAGAAGGCACATTTTCAGCCCTGGCTAACACAGTTGAGAAACACACACTGGCCTCCCTCCTACCTTTaGCTTCAGATGCTCATATTG | + |
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Preference number: 2 (lower is better) Translates to: KQKAHFQPWLTQLRNTHWPPSYL*LQMLIL Trigger: CAATATGAGCATCTGAAGCCAAAGGTAGGAGGGAGG...CCAGTGTGTGTTTCTCAACTGTGTTAGCCAGGGCTGAAAATGTGCCTTCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAGAAGGCACATTTTCAGCCCTGGCTAACACAGTTGAGAAACACACACTGGGAAGCTAACATTTGCTaGGAAGAAGAGGCTGCACAC | + |
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Preference number: 2 (lower is better) Translates to: KQKAHFQPWLTQLRNTHWEANIC*EEEAAH Trigger: GTGTGCAGCCTCTTCTTCCCAGCAAATGTTAGCTTC...CCAGTGTGTGTTTCTCAACTGTGTTAGCCAGGGCTGAAAATGTGCCTTCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR GCA 90 bp | TTATATAGGCATTTAACACTCTCTATGGAGGCTTGGGTCTTAGCTAAAGCTTTACTCGGACACACACACTaGCCTCCTCAGCTTGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LYRHLTLSMEAWVLAKALLGHTH*PPQLVP Trigger: AGGGACAAGCTGAGGAGGGCAGTGTGTGTGTCCGAG...TAAAGCTTTAGCTAAGACCCAAGCCTCCATAGAGAGTGTTAAATGCCTATATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
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| 3UTR-3UTR CCA 90 bp | GACCTTCCAACCCCCACTGTTTACAAAGATGAAGGGAAGGTCATTTTTCTCAGAGCCCCCTCCAATTTCTaGAGTTATAAGGTTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: DLPTPTVYKDEGKVIFLRAPSNF*SYKVSF Trigger: GAAAGAAACCTTATAACTCCAGAAATTGGAGGGGGC...TCTGAGAAAAATGACCTTCCCTTCATCTTTGTAAACAGTGGGGGTTGGAAGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
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| 3UTR-3UTR CCA 90 bp | TGCAAACAGAAGGCACATTTTCAGCCCTGGCTAACACAGTTGAGAAACACACACCACAGATCCATGGCATaGCTTTTGCTTATGAAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: CKQKAHFQPWLTQLRNTHHRSMA*LLLMKV Trigger: AACTTTCATAAGCAAAAGCCATGCCATGGATCTGTG...GTGTGTGTTTCTCAACTGTGTTAGCCAGGGCTGAAAATGTGCCTTCTGTTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATATAGGCATTTAACACTCTCTATGGAGGCTTGGGTCTTAGCTAAAGCTTTAAGCAGAAGTGCAGCCTaGGGTATCACAGAGATTATG | + |
|
Preference number: 2 (lower is better) Translates to: LYRHLTLSMEAWVLAKALSRSAA*GITEIM Trigger: CATAATCTCTGTGATACCTCAGGCTGCACTTCTGCT...TAAAGCTTTAGCTAAGACCCAAGCCTCCATAGAGAGTGTTAAATGCCTATATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR-3UTR CCA 90 bp | TTATATAGGCATTTAACACTCTCTATGGAGGCTTGGGTCTTAGCTAAAGCTTTACACAGATCCATGGCATaGCTTTTGCTTATGAAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LYRHLTLSMEAWVLAKALHRSMA*LLLMKV Trigger: AACTTTCATAAGCAAAAGCCATGCCATGGATCTGTG...TAAAGCTTTAGCTAAGACCCAAGCCTCCATAGAGAGTGTTAAATGCCTATATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR GCA 72 bp | GCCTCAGAAAGCAGGCACCACCTGGTGGCACAGATGTaGTCCCTGCAGCCGGGAAGACCATGCCCCTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: ASESRHHLVAQM*SLQPGRPCPWI Trigger: GATCCAGGGGCATGGTCTTCCCGGCTGCAGGGAGCACATCTGTGCCACCAGGTGGTGCCTGCTTTCTGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR GCA 72 bp | GGCCTGGCCTCCACACAAGTTGCACCCATGCCCACATaGTGCCTGACCTCTGTCACAACTGCTCTGCCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLASTQVAPMPT*CLTSVTTALPE Trigger: CTCCGGCAGAGCAGTTGTGACAGAGGTCAGGCAGCATGTGGGCATGGGTGCAACTTGTGTGGAGGCCAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR GCA 72 bp | CTGGCCTCCACACAAGTTGCACCCATGCCCACATGCTaGCTGACCTCTGTCACAACTGCTCTGCCGGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LASTQVAPMPTC*LTSVTTALPEP Trigger: AGGCTCCGGCAGAGCAGTTGTGACAGAGGTCAGGCAGCATGTGGGCATGGGTGCAACTTGTGTGGAGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR TCA 72 bp | CCTCCACACAAGTTGCACCCATGCCCACATGCTGCCTaGCCTCTGTCACAACTGCTCTGCCGGAGCCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PPHKLHPCPHAA*PLSQLLCRSLF Trigger: AAACAGGCTCCGGCAGAGCAGTTGTGACAGAGGTCAGGCAGCATGTGGGCATGGGTGCAACTTGTGTGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR GCA 72 bp | CCTCCTCAGCTTGTCCCTGCTATGAATCCCGAGGCCTaGTTGTTTGGCTCCAGGCCACTGAGAGGCATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PPQLVPAMNPEA*LFGSRPLRGIP Trigger: AGGAATGCCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCGGGATTCATAGCAGGGACAAGCTGAGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR GCA 72 bp | TCTCGGACACACACACTGCCCTCCTCAGCTTGTCCCTaGTATGAATCCCGAGGCCTGCTTGTTTGGCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SRTHTLPSSACP*YESRGLLVWLQ Trigger: CTGGAGCCAAACAAGCAGGCCTCGGGATTCATAGCAGGGACAAGCTGAGGAGGGCAGTGTGTGTGTCCGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR TCA 72 bp | TTGGCAAATGCCTCCTGGGGATGTGGCAGAAGTGGCTaGGGACCACTGGCGTATACAGGAGGCTTCTACGCA | + |
|
Preference number: 3 (lower is better) Translates to: LANASWGCGRSG*GPLAYTGGFYA Trigger: TGCGTAGAAGCCTCCTGTATACGCCAGTGGTCCTCAGCCACTTCTGCCACATCCCCAGGAGGCATTTGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR CCA 72 bp | GCTTGTCCCTGCTATGAATCCCGAGGCCTGCTTGTTTaGCTCCAGGCCACTGAGAGGCATTCCTCCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ACPCYESRGLLV*LQATERHSSFL Trigger: AAGGAAGGAGGAATGCCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCGGGATTCATAGCAGGGACAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR CCA 72 bp | ATGCCTGTGGACATTGGCAAATGCCTCCTGGGGATGTaGCAGAAGTGGCTGAGGACCACTGGCGTATACAGG | + |
|
Preference number: 3 (lower is better) Translates to: MPVDIGKCLLGM*QKWLRTTGVYR Trigger: CCTGTATACGCCAGTGGTCCTCAGCCACTTCTGCCACATCCCCAGGAGGCATTTGCCAATGTCCACAGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR CCA 72 bp | GACATTGGCAAATGCCTCCTGGGGATGTGGCAGAAGTaGCTGAGGACCACTGGCGTATACAGGAGGCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: DIGKCLLGMWQK*LRTTGVYRRLL Trigger: TAGAAGCCTCCTGTATACGCCAGTGGTCCTCAGCCACTTCTGCCACATCCCCAGGAGGCATTTGCCAATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR CCA 72 bp | CTGTGCTGTGCACCCCAGGACACTGAGAAGCCTCTCTaGCCTCTGCCCACTAGACATAAGCAGCAGTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LCCAPQDTEKPL*PLPTRHKQQSF Trigger: AAATGACTGCTGCTTATGTCTAGTGGGCAGAGGCCAGAGAGGCTTCTCAGTGTCCTGGGGTGCACAGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR GCA 72 bp | CATTACCACGTGAGGAAAGGAGCCTGCATCCCTGTGTaGGCACAATCCCACTCAATACACTCTTCCTCACCC | + |
|
Preference number: 3 (lower is better) Translates to: HYHVRKGACIPV*AQSHSIHSSSP Trigger: GGGTGAGGAAGAGTGTATTGAGTGGGATTGTGCGCACACAGGGATGCAGGCTCCTTTCCTCACGTGGTAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR CCA 72 bp | GCTGCTGTAATCACAAAGTCCTCTAAGGCCGTGGACTaGCAACTAACCGACGTGACTTTAGATGCTGCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: AAVITKSSKAVD*QLTDVTLDAAA Trigger: GGCGGCAGCATCTAAAGTCACGTCGGTTAGTTGCCAGTCCACGGCCTTAGAGGACTTTGTGATTACAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR GCA 72 bp | ATCCTCCCTCCTACCTTTGGCTTCAGATGCTCATATTaGGTGGAACAGCATGCCTGCTGCACTTGGCACACT | + |
|
Preference number: 3 (lower is better) Translates to: ILPPTFGFRCSY*VEQHACCTWHT Trigger: AGTGTGCCAAGTGCAGCAGGCATGCTGTTCCACGCAATATGAGCATCTGAAGCCAAAGGTAGGAGGGAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR GCA 72 bp | GGACCTTCACAGCAGGCTCTGCTAGTCTCCAGTGACTaGAGAGTCCTCTCTCACTCACTCATTAGCACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GPSQQALLVSSD*RVLSHSLISTS Trigger: TGAAGTGCTAATGAGTGAGTGAGAGAGGACTCTGCAGTCACTGGAGACTAGCAGAGCCTGCTGTGAAGGTCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR GCA 72 bp | ACCCATGCCCACATGCTGCCTGACCTCTGTCACAACTaGTCTGCCGGAGCCTGTTTAGTAATTAGCAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: THAHMLPDLCHN*SAGACLVISSF Trigger: AAAGCTGCTAATTACTAAACAGGCTCCGGCAGAGCAGTTGTGACAGAGGTCAGGCAGCATGTGGGCATGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR GCA 72 bp | AGAAACAAAGCTCAAATGACCTGCAGGCCAGGGAGATaGTCCACCTCCCTAGCAGTCGAGGAAGTGCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: RNKAQMTCRPGR*STSLAVEEVQT Trigger: TGTTTGCACTTCCTCGACTGCTAGGGAGGTGGAGCATCTCCCTGGCCTGCAGGTCATTTGAGCTTTGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR GCA 72 bp | GTGCACCCCAGGACACTGAGAAGCCTCTCTGGCCTCTaGCCACTAGACATAAGCAGCAGTCATTTTAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VHPRTLRSLSGL*PLDISSSHFKV Trigger: CACTTTAAAATGACTGCTGCTTATGTCTAGTGGGCAGAGGCCAGAGAGGCTTCTCAGTGTCCTGGGGTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR TCA 72 bp | AGAGGCTTTAGCAATTCCTCCAGCCCCTTCTCATACTaGCCTCACCACATTCCAGTTCTGACGCTTCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: RGFSNSSSPFSY*PHHIPVLTLLT Trigger: GGTCAGAAGCGTCAGAACTGGAATGTGGTGAGGTCAGTATGAGAAGGGGCTGGAGGAATTGCTAAAGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCCAGGGAGATGCTCCACCTCCCTAGCAGTCGAGGAAGTGCAAACAGAAGGGAGCTGAGTAGTTATTaGCTCTTCTGTTACTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QAREMLHLPSSRGSANRRELSSY*LFCYLE Trigger: TTCTAAGTAACAGAAGAGCAAATAACTACTCAGCTC...CCTTCTGTTTGCACTTCCTCGACTGCTAGGGAGGTGGAGCATCTCCCTGGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR TCA 72 bp | TCTGTAGGTCCAGGAGAAGGCGAGGTCATGGTTCCATaGCACCACAATGTCGGTGACAATGTGTGTTCTATG | + |
|
Preference number: 3 (lower is better) Translates to: SVGPGEGEVMVP*HHNVGDNVCSM Trigger: CATAGAACACACATTGTCACCGACATTGTGGTGTCATGGAACCATGACCTCGCCTTCTCCTGGACCTACAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR GCA 72 bp | TCCCGAACTCACATTGCTGATGGTGAAGCTAACATTTaGTGGGAAGAAGAGGCTGCACACACATGGCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SRTHIADGEANI*WEEEAAHTWLV Trigger: GACAAGCCATGTGTGTGCAGCCTCTTCTTCCCAGCAAATGTTAGCTTCACCATCAGCAATGTGAGTTCGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR GCA 72 bp | CAATGTACAATTCACAGAAACAAAGCTCAAATGACCTaGAGGCCAGGGAGATGCTCCACCTCCCTAGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: QCTIHRNKAQMT*RPGRCSTSLAV Trigger: GACTGCTAGGGAGGTGGAGCATCTCCCTGGCCTGCAGGTCATTTGAGCTTTGTTTCTGTGAATTGTACATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR CCA 72 bp | GCTAACATTTGCTGGGAAGAAGAGGCTGCACACACATaGCTTGTCTATGGTGAGATCGTTAGAGCGGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: ANICWEEEAAHT*LVYGEIVRAVS Trigger: ACTCACCGCTCTAACGATCTCACCATAGACAAGCCATGTGTGTGCAGCCTCTTCTTCCCAGCAAATGTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR CCA 72 bp | AAAACCAGGTGGGAAGGCACACTTGCAGGCTCGATGTaGCCAGCTGCTTGTCTCTGTGAATGTTTTATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KTRWEGTLAGSM*PAACLCECFIA Trigger: AGCAATAAAACATTCACAGAGACAAGCAGCTGGCCACATCGAGCCTGCAAGTGTGCCTTCCCACCTGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAGTCCTTTGCACAAAGCACCACACCGCTCAATTACTGGGCTGCTGATACTTCCTCCCTCCTACCTTaGGCTTCAGATGCTCATATT | + |
|
Preference number: 3 (lower is better) Translates to: PKSFAQSTTPLNYWAADTSSLLP*ASDAHI Trigger: AATATGAGCATCTGAAGCCAAAGGTAGGAGGGAGGA...AGTATCAGCAGCCCAGTAATTGAGCGGTGTGGTGCTTTGTGCAAAGGACTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR GCA 72 bp | TCTCACTCACTCATTAGCACTTCAACCAAAGTCCTTTaGACAAAGCACCACACCGCTCAATTACTGGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SHSLISTSTKVL*TKHHTAQLLGC Trigger: GCAGCCCAGTAATTGAGCGGTGTGGTGCTTTGTGCAAAGGACTTTGGTTGAAGTGCTAATGAGTGAGTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR CCA 72 bp | TGCTCATATTGCGTGGAACAGCATGCCTGCTGCACTTaGCACACTTTAGATACTAGCTGGATGCTATTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: CSYCVEQHACCT*HTLDTSWMLFH Trigger: GTGGAATAGCATCCAGCTAGTATCTAAAGTGTGCCAAGTGCAGCAGGCATGCTGTTCCACGCAATATGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAGGTATCACAGAGATTATGCAGTATAACGACTGACTTCTCTCCTCGGAGGGACCTAACGGGTCTTTaGAGTATGAATTCTAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: PEVSQRLCSITTDFSPRRDLTGL*SMNSST Trigger: GGTGCTAGAATTCATACTCAAAAGACCCGTTAGGTC...CCTCCGAGGAGAGAAGTCAGTCGTTATACTGCATAATCTCTGTGATACCTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR TCA 72 bp | GTTTTACTAGAGAGTCTCCAAGCTAGCCTCAACTTGTaGTCCTCCCTCCTACCTTTGGCTTCAGATGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VLLESLQASLNL*SSLLPLASDAH Trigger: ATGAGCATCTGAAGCCAAAGGTAGGAGGGAGGATCACAAGTTGAGGCTAGCTTGGAGACTCTCTAGTAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR TCA 72 bp | ACTTGCAGGCTCGATGTGGCCAGCTGCTTGTCTCTGTaGATGTTTTATTGCTACACAGTGGTATCCCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: TCRLDVASCLSL*MFYCYTVVSHS Trigger: AGAATGGGATACCACTGTGTAGCAATAAAACATTCACAGAGACAAGCAGCTGGCCACATCGAGCCTGCAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR CCA 72 bp | AAGTCCTTTGCACAAAGCACCACACCGCTCAATTACTaGGCTGCTGATACTACACGCTGCTGTAATCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: KSFAQSTTPLNY*AADTTRCCNHK Trigger: TTTGTGATTACAGCAGCGTGTAGTATCAGCAGCCCAGTAATTGAGCGGTGTGGTGCTTTGTGCAAAGGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR CCA 72 bp | CGAACTCACATTGCTGATGGTGAAGCTAACATTTGCTaGGAAGAAGAGGCTGCACACACATGGCTTGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: RTHIADGEANIC*EEEAAHTWLVY Trigger: ATAGACAAGCCATGTGTGTGCAGCCTCTTCTTCCCAGCAAATGTTAGCTTCACCATCAGCAATGTGAGTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGTGTCTGCATTTCTTATTCTGTAGGTCCAGGAGAAGGCGAGGTCATGGTTGACCTAACGGGTCTTTaGAGTATGAATTCTAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: FSVCISYSVGPGEGEVMVDLTGL*SMNSST Trigger: GGTGCTAGAATTCATACTCAAAAGACCCGTTAGGTC...AACCATGACCTCGCCTTCTCCTGGACCTACAGAATAAGAAATGCAGACACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR CCA 72 bp | CATGCCTGCTGCACTTGGCACACTTTAGATACTAGCTaGATGCTATTCCACAATCTACACACAACCTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HACCTWHTLDTS*MLFHNLHTTSK Trigger: CTTTGAGGTTGTGTGTAGATTGTGGAATAGCATCCAGCTAGTATCTAAAGTGTGCCAAGTGCAGCAGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR GCA 72 bp | ATGGCTAACATCTGTCGACAGGTAGAACCTATGCTCTaGTCATTCAAGCCTTGTTTCATAAGAGCCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: MANICRQVEPML*SFKPCFIRASS Trigger: AGATGAGGCTCTTATGAAACAAGGCTTGAATGAGCAGAGCATAGGTTCTACCTGTCGACAGATGTTAGCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR CCA 72 bp | AAACTAATAATACAGATAAATGCTACTAAAACCAGGTaGGAAGGCACACTTGCAGGCTCGATGTGGCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KLIIQINATKTR*EGTLAGSMWPA Trigger: AGCTGGCCACATCGAGCCTGCAAGTGTGCCTTCCCACCTGGTTTTAGTAGCATTTATCTGTATTATTAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR TCA 72 bp | AGTCCTAGACCTTCCAACCCCCACTGTTTACAAAGATaGAGGGAAGGTCATTTTTCTCAGAGTATAGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SPRPSNPHCLQR*REGHFSQSIVS Trigger: TGAAACTATACTCTGAGAAAAATGACCTTCCCTTCATCTTTGTAAACAGTGGGGGTTGGAAGGTCTAGGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR CCA 72 bp | AGTCAAAGGGACAAGGCAAGATGTCCCTCCAGTTACTaGACATATAAGGCTTTCCTCTTTAAGACTGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SQRDKARCPSSY*TYKAFLFKTVK Trigger: TTTAACAGTCTTAAAGAGGAAAGCCTTATATGTCCAGTAACTGGAGGGACATCTTGCCTTGTCCCTTTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR CCA 72 bp | TCTTTATATAGGCATTTAACACTCTCTATGGAGGCTTaGGTCTTAGCTAAAGCTTTACTGTTTTCCAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLYRHLTLSMEA*VLAKALLFSSS Trigger: AGAACTGGAAAACAGTAAAGCTTTAGCTAAGACCCAAGCCTCCATAGAGAGTGTTAAATGCCTATATAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR TCA 90 bp | ATGATGGGCAGGGCGGGGCAGATGAGCTCCAGGAGAGAGCAGACCAAGAGGAAGGGTGTGATGGGCGCATaGAGGCTTTCCCGCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MMGRAGQMSSRREQTKRKGVMGA*RLSRTP Trigger: AGGAGTGCGGGAAAGCCTTCATGCGCCCATCACACC...CTTCCTCTTGGTCTGCTCTCTCCTGGAGCTCATCTGCCCCGCCCTGCCCATCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCCTCCTCAGCTTGTCCCTGCTATGAATCCCGAGGCCTGCTTGTTTGGCTCCCTCCAGCTCACGTGTaGCTTCTCTGTCCCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSSACPCYESRGLLVWLPPAHV*LLCPLW Trigger: CCAGAGGGGACAGAGAAGTCACACGTGAGCTGGAGG...GAGCCAAACAAGCAGGCCTCGGGATTCATAGCAGGGACAAGCTGAGGAGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | ATGATGGGCAGGGCGGGGCAGATGAGCTCCAGGAGAGAGCAGACCAAGAGGAAGCCTCCCTATGGGCTGTaGACTGGACAGAATCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MMGRAGQMSSRREQTKRKPPYGL*TGQNQA Trigger: GGCCTGATTCTGTCCAGTGCACAGCCCATAGGGAGG...CTTCCTCTTGGTCTGCTCTCTCCTGGAGCTCATCTGCCCCGCCCTGCCCATCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR TCA 90 bp | TATGAATCCCGAGGCCTGCTTGTTTGGCTCCAGGCCACTGAGAGGCATTCCTCCCCTCCAGCTCACGTGTaGCTTCTCTGTCCCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YESRGLLVWLQATERHSSPPAHV*LLCPLW Trigger: CCAGAGGGGACAGAGAAGTCACACGTGAGCTGGAGG...GGAGGAATGCCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCGGGATTCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR TCA 90 bp | CATGCCCACATGCTGCCTGACCTCTGTCACAACTGCTCTGCCGGAGCCTGTTTAGGTTTTCCTCCAGGGTaGGCCTCCCTATGGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HAHMLPDLCHNCSAGACLGFPPG*ASLWAV Trigger: CACAGCCCATAGGGAGGCTCACCCTGGAGGAAAACC...TAAACAGGCTCCGGCAGAGCAGTTGTGACAGAGGTCAGGCAGCATGTGGGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCCTCCTCAGCTTGTCCCTGCTATGAATCCCGAGGCCTGCTTGTTTGGCTCTTTTCTGGTGTCGACTaGGCTCTGAGCCTCGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSSACPCYESRGLLVWLFSGVD*ALSLGR Trigger: TCGGCCGAGGCTCAGAGCTCAGTCGACACCAGAAAA...GAGCCAAACAAGCAGGCCTCGGGATTCATAGCAGGGACAAGCTGAGGAGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCGGAGGGCTGGCCCGGGTGTGGGTGTGGAAAGGTTCCAACTGCTAATCTCGACCTTGCCATGCTGTaGATGCTCACTGGCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSEGWPGCGCGKVPTANLDLAML*MLTGLC Trigger: GCAAAGGCCAGTGAGCATGCACAGCATGGCAAGGTC...GAGATTAGCAGTTGGAACCTTTCCACACCCACACCCGGGCCAGCCCTCCGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | CATGCCCACATGCTGCCTGACCTCTGTCACAACTGCTCTGCCGGAGCCTGTTTAGCATGCGTGAGCAGGTaGAGGCTGAGCTGTGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HAHMLPDLCHNCSAGACLACVSR*RLSCVS Trigger: CGACACACAGCTCAGCCTGCACCTGCTCACGCATGC...TAAACAGGCTCCGGCAGAGCAGTTGTGACAGAGGTCAGGCAGCATGTGGGCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCCTCCTCAGCTTGTCCCTGCTATGAATCCCGAGGCCTGCTTGTTTGGCTCGTGTGTGACATCTGGTaGAGAGCGAGCTGGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSSACPCYESRGLLVWLVCDIW*RASWEA Trigger: TGCCTCCCAGCTCGCTCTCCACCAGATGTCACACAC...GAGCCAAACAAGCAGGCCTCGGGATTCATAGCAGGGACAAGCTGAGGAGGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCGGAGGGCTGGCCCGGGTGTGGGTGTGGAAAGGTTCCAACTGCTAATCTCCTCGACAGAGGTTACTaGAGCTTGCCTCAAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSEGWPGCGCGKVPTANLLDRGY*SLPQVS Trigger: GGACACTTGAGGCAAGCTGCAGTAACCTCTGTCGAG...GAGATTAGCAGTTGGAACCTTTCCACACCCACACCCGGGCCAGCCCTCCGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR CCA 90 bp | TATGAATCCCGAGGCCTGCTTGTTTGGCTCCAGGCCACTGAGAGGCATTCCTCCGTTGCTCACGTTCAATaGGAGGTGGCTGGCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YESRGLLVWLQATERHSSVAHVQ*EVAGTG Trigger: CCCTGTGCCAGCCACCTCCCATTGAACGTGAGCAAC...GGAGGAATGCCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCGGGATTCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR CCA 90 bp | ATGATGGGCAGGGCGGGGCAGATGAGCTCCAGGAGAGAGCAGACCAAGAGGAAGCCGGTGTGGATTTTCTaGTGTCGACTGAGCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MMGRAGQMSSRREQTKRKPVWIF*CRLSSE Trigger: CTCAGAGCTCAGTCGACACCAGAAAATCCACACCGG...CTTCCTCTTGGTCTGCTCTCTCCTGGAGCTCATCTGCCCCGCCCTGCCCATCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR CAA 72 bp | CCTCAGCTTGTCCCTGCTATGAATCCCGAGGCCTGCTaGTTTGGCTCCAGGCCACTGAGAGGCATTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQLVPAMNPEAC*FGSRPLRGIPP Trigger: AGGAGGAATGCCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCGGGATTCATAGCAGGGACAAGCTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCGGAGGGCTGGCCCGGGTGTGGGTGTGGAAAGGTTCCAACTGCTAATCTCGCTCTGTGGTGCAAGTaGAGGACTTTCCACATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSEGWPGCGCGKVPTANLALWCK*RTFHIP Trigger: AGGAATGTGGAAAGTCCTTCACTTGCACCACAGAGC...GAGATTAGCAGTTGGAACCTTTCCACACCCACACCCGGGCCAGCCCTCCGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | GACCTGCAGGCCAGGGAGATGCTCCACCTCCCTAGCAGTCGAGGAAGTGCAAACGACTTTTCTCAGAGCTaGAGGGTTTTCCTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DLQAREMLHLPSSRGSANDFSQS*RVFLQG Trigger: ACCCTGGAGGAAAACCCTGCAGCTCTGAGAAAAGTC...GTTTGCACTTCCTCGACTGCTAGGGAGGTGGAGCATCTCCCTGGCCTGCAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCCTCCTCAGCTTGTCCCTGCTATGAATCCCGAGGCCTGCTTGTTTGGCTCCTTCATTCTTCCTCTTaGGGCTGGAGAGCGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSSACPCYESRGLLVWLLHSSS*GWRASP Trigger: TGGAGACGCTCTCCAGCCGCAAGAGGAAGAATGAAG...GAGCCAAACAAGCAGGCCTCGGGATTCATAGCAGGGACAAGCTGAGGAGGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCGGAGGGCTGGCCCGGGTGTGGGTGTGGAAAGGTTCCAACTGCTAATCTCTCACATCTGGTTTGGTaGCTTGACAACCCACGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SSEGWPGCGCGKVPTANLSHLVW*LDNPRL Trigger: TAACCGTGGGTTGTCAAGTCACCAAACCAGATGTGA...GAGATTAGCAGTTGGAACCTTTCCACACCCACACCCGGGCCAGCCCTCCGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR TCA 90 bp | TATGAATCCCGAGGCCTGCTTGTTTGGCTCCAGGCCACTGAGAGGCATTCCTCCGGTGTGAGTCAGAGATaGAGCCTTTCCCACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YESRGLLVWLQATERHSSGVSQR*SLSHTP Trigger: AGGAGTGTGGGAAAGGCTTCATCTCTGACTCACACC...GGAGGAATGCCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCGGGATTCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCCAGGGAGATGCTCCACCTCCCTAGCAGTCGAGGAAGTGCAAACAGAAGGGCTCTGTGGTGCAAGTaGAGGACTTTCCACATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QAREMLHLPSSRGSANRRALWCK*RTFHIP Trigger: AGGAATGTGGAAAGTCCTTCACTTGCACCACAGAGC...CCTTCTGTTTGCACTTCCTCGACTGCTAGGGAGGTGGAGCATCTCCCTGGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR GCA 90 bp | TATGAATCCCGAGGCCTGCTTGTTTGGCTCCAGGCCACTGAGAGGCATTCCTCCCCATCCAGGGCTCTTTaGCCTGTTCTAGAAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YESRGLLVWLQATERHSSPSRAL*PVLEGR Trigger: TCTCCCTTCTAGAACAGGGCAAAGAGCCCTGGATGG...GGAGGAATGCCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCGGGATTCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR TCA 90 bp | TATGAATCCCGAGGCCTGCTTGTTTGGCTCCAGGCCACTGAGAGGCATTCCTCCTCTGGTTTGGTGACTTaGCAACCCACGGTTACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YESRGLLVWLQATERHSSSGLVT*QPTVTR Trigger: CCTAGTAACCGTGGGTTGTCAAGTCACCAAACCAGA...GGAGGAATGCCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCGGGATTCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR CCA 90 bp | TATGAATCCCGAGGCCTGCTTGTTTGGCTCCAGGCCACTGAGAGGCATTCCTCCTCTTCCTCTTGCGGCTaGAGAGCGTCTCCAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: YESRGLLVWLQATERHSSSSSCG*RASPKH Trigger: ATGTTTTGGAGACGCTCTCCAGCCGCAAGAGGAAGA...GGAGGAATGCCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCGGGATTCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| 3UTR CAA 72 bp | GATCCTCCCTCCTACCTTTGGCTTCAGATGCTCATATaGCGTGGAACAGCATGCCTGCTGCACTTGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: DPPSYLWLQMLI*RGTACLLHLAH Trigger: GTGTGCCAAGTGCAGCAGGCATGCTGTTCCACGCAATATGAGCATCTGAAGCCAAAGGTAGGAGGGAGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR CCA 90 bp | GGCACAGATGTGCTCCCTGCAGCCGGGAAGACCATGCCCCTGGATCTTGTTACTCTGTTTTTGAAGGCCTaGTCCTGTCTTCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTDVLPAAGKTMPLDLVTLFLKA*SCLLLP Trigger: AGGAAGAAGAAGACAGGACCAGGCCTTCAAAAACAG...AGTAACAAGATCCAGGGGCATGGTCTTCCCGGCTGCAGGGAGCACATCTGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR GCA 90 bp | GACCTGCAGGCCAGGGAGATGCTCCACCTCCCTAGCAGTCGAGGAAGTGCAAACGACACCCAATCAGGATaGCAAATTTTTGTCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: DLQAREMLHLPSSRGSANDTQSG*QIFVSF Trigger: GAATGAGACAAAAATTTGGCATCCTGATTGGGTGTC...GTTTGCACTTCCTCGACTGCTAGGGAGGTGGAGCATCTCCCTGGCCTGCAGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR GCA 90 bp | TATGAATCCCGAGGCCTGCTTGTTTGGCTCCAGGCCACTGAGAGGCATTCCTCCCTTTCCCGCACTCCTTaGATTCAAAGCACTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YESRGLLVWLQATERHSSLSRTP*IQSTSH Trigger: ATGAGAAGTGCTTTGAATGCAAGGAGTGCGGGAAAG...GGAGGAATGCCTCTCAGTGGCCTGGAGCCAAACAAGCAGGCCTCGGGATTCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR CCA 90 bp | CCTGAGGTATCACAGAGATTATGCAGTATAACGACTGACTTCTCTCCTCGGAGGGTGTGTGACATCTGGTaGAGAGCGAGCTGGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PEVSQRLCSITTDFSPRRVCDIW*RASWEA Trigger: TGCCTCCCAGCTCGCTCTCCACCAGATGTCACACAC...CCTCCGAGGAGAGAAGTCAGTCGTTATACTGCATAATCTCTGTGATACCTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAGGTATCACAGAGATTATGCAGTATAACGACTGACTTCTCTCCTCGGAGGGCTTTTGATGGTGACTaGGCTGGGAGGGAGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PEVSQRLCSITTDFSPRRAFDGD*AGRECG Trigger: TCCACACTCCCTCCCAGCTCAGTCACCATCAAAAGC...CCTCCGAGGAGAGAAGTCAGTCGTTATACTGCATAATCTCTGTGATACCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAGGTATCACAGAGATTATGCAGTATAACGACTGACTTCTCTCCTCGGAGGGACCTTGCCATGCTGTaGATGCTCACTGGCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PEVSQRLCSITTDFSPRRDLAML*MLTGLC Trigger: GCAAAGGCCAGTGAGCATGCACAGCATGGCAAGGTC...CCTCCGAGGAGAGAAGTCAGTCGTTATACTGCATAATCTCTGTGATACCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR CCA 90 bp | GACCTTCCAACCCCCACTGTTTACAAAGATGAAGGGAAGGTCATTTTTCTCAGAAGCTGGGAGGGAGTGTaGAAGGCCTTCCCGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLPTPTVYKDEGKVIFLRSWEGV*KAFPHS Trigger: GGAATGCGGGAAGGCCTTCCACACTCCCTCCCAGCT...TCTGAGAAAAATGACCTTCCCTTCATCTTTGTAAACAGTGGGGGTTGGAAGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGAAGGCACATTTTCAGCCCTGGCTAACACAGTTGAGAAACACACACTGGCCAAGCTCTTCTTCCTaGCATCTGGGACAAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KQKAHFQPWLTQLRNTHWPSSSS*HLGQAL Trigger: GAGCGCTTGTCCCAGATGGCAGGAAGAAGAGCTTGG...CCAGTGTGTGTTTCTCAACTGTGTTAGCCAGGGCTGAAAATGTGCCTTCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR CCA 90 bp | CCTGAGGTATCACAGAGATTATGCAGTATAACGACTGACTTCTCTCCTCGGAGGCCGGTGTGGATTTTCTaGTGTCGACTGAGCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PEVSQRLCSITTDFSPRRPVWIF*CRLSSE Trigger: CTCAGAGCTCAGTCGACACCAGAAAATCCACACCGG...CCTCCGAGGAGAGAAGTCAGTCGTTATACTGCATAATCTCTGTGATACCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAGTCCTTTGCACAAAGCACCACACCGCTCAATTACTGGGCTGCTGATACTTCACATCTGGTTTGGTaGCTTGACAACCCACGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: PKSFAQSTTPLNYWAADTSHLVW*LDNPRL Trigger: TAACCGTGGGTTGTCAAGTCACCAAACCAGATGTGA...AGTATCAGCAGCCCAGTAATTGAGCGGTGTGGTGCTTTGTGCAAAGGACTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR TCA 90 bp | AGCACTTCAACCAAAGTCCTTTGCACAAAGCACCACACCGCTCAATTACTGGGCATCAGCAAGACTCAGTaGCAGCAGGTTGCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: STSTKVLCTKHHTAQLLGISKTQ*QQVAVV Trigger: AACTACAGCAACCTGCTGTCACTGAGTCTTGCTGAT...GCCCAGTAATTGAGCGGTGTGGTGCTTTGTGCAAAGGACTTTGGTTGAAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCTGATGGTGAAGCTAACATTTGCTGGGAAGAAGAGGCTGCACACACATGGCACAGGGACGTTTTCTaGCTTTTCTCAGAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IADGEANICWEEEAAHTWHRDVF*LFSELQ Trigger: CTGCAGCTCTGAGAAAAGTCAGAAAACGTCCCTGTG...CCATGTGTGTGCAGCCTCTTCTTCCCAGCAAATGTTAGCTTCACCATCAGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGTACAACACTGTGTGCGTCTCACCTATTCCAAGGTTTAGTTTTGCCAAGTGCTTTTGATGGTGACTaGGCTGGGAGGGAGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SCTTLCASHLFQGLVLPSAFDGD*AGRECG Trigger: TCCACACTCCCTCCCAGCTCAGTCACCATCAAAAGC...ACTTGGCAAAACTAAACCTTGGAATAGGTGAGACGCACACAGTGTTGTACAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR TCA 90 bp | AGCACTTCAACCAAAGTCCTTTGCACAAAGCACCACACCGCTCAATTACTGGGCATGGCGAAGAAGGTGTaGGTCAGAGATGAAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: STSTKVLCTKHHTAQLLGMAKKV*VRDEAF Trigger: AAAGGCTTCATCTCTGACTCACACCTTCTTCGCCAT...GCCCAGTAATTGAGCGGTGTGGTGCTTTGTGCAAAGGACTTTGGTTGAAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGAAGGCACATTTTCAGCCCTGGCTAACACAGTTGAGAAACACACACTGGCCATCCAGGGCTCTTTaGCCTGTTCTAGAAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQKAHFQPWLTQLRNTHWPSRAL*PVLEGR Trigger: TCTCCCTTCTAGAACAGGGCAAAGAGCCCTGGATGG...CCAGTGTGTGTTTCTCAACTGTGTTAGCCAGGGCTGAAAATGTGCCTTCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR GCA 90 bp | AGCACTTCAACCAAAGTCCTTTGCACAAAGCACCACACCGCTCAATTACTGGGCTCTCACTGTCTTTTCTaGTTTCCTGGGGTCTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: STSTKVLCTKHHTAQLLGSHCLF*FPGVSD Trigger: ATCCGAGACCCCAGGAAAGCAGAAAAGACAGTGAGA...GCCCAGTAATTGAGCGGTGTGGTGCTTTGTGCAAAGGACTTTGGTTGAAGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCTTCCTTTACATTCATGGAACTTAAGAGTTTTTCATCAACAAAAGCCTCGCCGTGCCCCAGCATaGGTGAGCAGGTGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLLPLHSWNLRVFHQQKPRRAPA*VSRCRL Trigger: CAGCCTGCACCTGCTCACGCATGCTGGGGCACGGCG...AGGCTTTTGTTGATGAAAAACTCTTAAGTTCCATGAATGTAAAGGAAGGAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR CAA 72 bp | CGATGTGGCCAGCTGCTTGTCTCTGTGAATGTTTTATaGCTACACAGTGGTATCCCATTCTGTTCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RCGQLLVSVNVL*LHSGIPFCSGQ Trigger: CTGGCCAGAACAGAATGGGATACCACTGTGTAGCAATAAAACATTCACAGAGACAAGCAGCTGGCCACATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGTGTCTGCATTTCTTATTCTGTAGGTCCAGGAGAAGGCGAGGTCATGGTTTCTGGTTTGGTGACTTaGCAACCCACGGTTACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSVCISYSVGPGEGEVMVSGLVT*QPTVTR Trigger: CCTAGTAACCGTGGGTTGTCAAGTCACCAAACCAGA...AACCATGACCTCGCCTTCTCCTGGACCTACAGAATAAGAAATGCAGACACTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCTCCAGTTACTGGACATATAAGGCTTTCCTCTTTAAGACTGTTAAAGTTTGGTTTTCCTCCAGGGTaGGCCTCCCTATGGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VPPVTGHIRLSSLRLLKFGFPPG*ASLWAV Trigger: CACAGCCCATAGGGAGGCTCACCCTGGAGGAAAACC...AAACTTTAACAGTCTTAAAGAGGAAAGCCTTATATGTCCAGTAACTGGAGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGAAGGCACATTTTCAGCCCTGGCTAACACAGTTGAGAAACACACACTGGTTGCCATGCTGTGCATaGTCACTGGCCTTTGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KQKAHFQPWLTQLRNTHWLPCCA*SLAFAL Trigger: TAAGGCAAAGGCCAGTGAGCATGCACAGCATGGCAA...CCAGTGTGTGTTTCTCAACTGTGTTAGCCAGGGCTGAAAATGTGCCTTCTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR GCA 90 bp | CCAAAGTCCTTTGCACAAAGCACCACACCGCTCAATTACTGGGCTGCTGATACTCTTTCCCGCACTCCTTaGATTCAAAGCACTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PKSFAQSTTPLNYWAADTLSRTP*IQSTSH Trigger: ATGAGAAGTGCTTTGAATGCAAGGAGTGCGGGAAAG...AGTATCAGCAGCCCAGTAATTGAGCGGTGTGGTGCTTTGTGCAAAGGACTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGTCTGCATTTCTTATTCTGTAGGTCCAGGAGAAGGCGAGGTCATGGTTAAGGGAGACCACCCGTaGCTTAGTATCAGCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FSVCISYSVGPGEGEVMVKGDHP*LSISKT Trigger: AGTCTTGCTGATACTAAGCCACGGGTGGTCTCCCTT...AACCATGACCTCGCCTTCTCCTGGACCTACAGAATAAGAAATGCAGACACTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR CCA 90 bp | GACCTTCCAACCCCCACTGTTTACAAAGATGAAGGGAAGGTCATTTTTCTCAGACTTCTCTGTCCCCTCTaGTCTTGCTGTCCTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLPTPTVYKDEGKVIFLRLLCPL*SCCPQE Trigger: CTCTTGAGGACAGCAAGACCAGAGGGGACAGAGAAG...TCTGAGAAAAATGACCTTCCCTTCATCTTTGTAAACAGTGGGGGTTGGAAGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGTCTGCATTTCTTATTCTGTAGGTCCAGGAGAAGGCGAGGTCATGGTTTTCCTTACACTTATGTaGCCTCTCACTCCCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSVCISYSVGPGEGEVMVFLTLM*PLTPLS Trigger: GCTCAGGGGAGTGAGAGGCCACATAAGTGTAAGGAA...AACCATGACCTCGCCTTCTCCTGGACCTACAGAATAAGAAATGCAGACACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR TCA 90 bp | CCAATTTCTGGAGTTATAAGGTTTCTTTCTTGTAACACGTGTTCCATCACTTCTGGTGTGATGGGCGCATaGAGGCTTTCCCGCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PISGVIRFLSCNTCSITSGVMGA*RLSRTP Trigger: AGGAGTGCGGGAAAGCCTTCATGCGCCCATCACACC...AGAAGTGATGGAACACGTGTTACAAGAAAGAAACCTTATAACTCCAGAAATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | CCAATTTCTGGAGTTATAAGGTTTCTTTCTTGTAACACGTGTTCCATCACTTCTGCATGCGTGAGCAGGTaGAGGCTGAGCTGTGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PISGVIRFLSCNTCSITSACVSR*RLSCVS Trigger: CGACACACAGCTCAGCCTGCACCTGCTCACGCATGC...AGAAGTGATGGAACACGTGTTACAAGAAAGAAACCTTATAACTCCAGAAATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR CCA 90 bp | TTATATAGGCATTTAACACTCTCTATGGAGGCTTGGGTCTTAGCTAAAGCTTTAAGCTGGGAGGGAGTGTaGAAGGCCTTCCCGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYRHLTLSMEAWVLAKALSWEGV*KAFPHS Trigger: GGAATGCGGGAAGGCCTTCCACACTCCCTCCCAGCT...TAAAGCTTTAGCTAAGACCCAAGCCTCCATAGAGAGTGTTAAATGCCTATATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCTCCAGTTACTGGACATATAAGGCTTTCCTCTTTAAGACTGTTAAAGTTTCCAAGCTCTTCTTCCTaGCATCTGGGACAAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VPPVTGHIRLSSLRLLKFPSSSS*HLGQAL Trigger: GAGCGCTTGTCCCAGATGGCAGGAAGAAGAGCTTGG...AAACTTTAACAGTCTTAAAGAGGAAAGCCTTATATGTCCAGTAACTGGAGGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | TTATATAGGCATTTAACACTCTCTATGGAGGCTTGGGTCTTAGCTAAAGCTTTACCTCCCTATGGGCTGTaGACTGGACAGAATCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LYRHLTLSMEAWVLAKALPPYGL*TGQNQA Trigger: GGCCTGATTCTGTCCAGTGCACAGCCCATAGGGAGG...TAAAGCTTTAGCTAAGACCCAAGCCTCCATAGAGAGTGTTAAATGCCTATATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR CCA 90 bp | CCTGAGGTATCACAGAGATTATGCAGTATAACGACTGACTTCTCTCCTCGGAGGCTTGAAGATCACATCTaGTTTGGTGACTTGACAACC | + |
|
Preference number: 4 (lower is better) Translates to: PEVSQRLCSITTDFSPRRLEDHI*FGDLTT Trigger: GGTTGTCAAGTCACCAAACCAGATGTGATCTTCAAG...CCTCCGAGGAGAGAAGTCAGTCGTTATACTGCATAATCTCTGTGATACCTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR CAA 72 bp | TCGACAGGTAGAACCTATGCTCTGCTCATTCAAGCCTaGTTTCATAAGAGCCTCATCTCCTGTACAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: STGRTYALLIQA*FHKSLISCTTL Trigger: CAGTGTTGTACAGGAGATGAGGCTCTTATGAAACAAGGCTTGAATGAGCAGAGCATAGGTTCTACCTGTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCTCCAGTTACTGGACATATAAGGCTTTCCTCTTTAAGACTGTTAAAGTTTGGTGTGAGTCAGAGATaGAGCCTTTCCCACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPPVTGHIRLSSLRLLKFGVSQR*SLSHTP Trigger: AGGAGTGTGGGAAAGGCTTCATCTCTGACTCACACC...AAACTTTAACAGTCTTAAAGAGGAAAGCCTTATATGTCCAGTAACTGGAGGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCTCCAGTTACTGGACATATAAGGCTTTCCTCTTTAAGACTGTTAAAGTTTGCAGGCTTCATTTGCTaGCATTCCTCCTGTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPPVTGHIRLSSLRLLKFAGFIC*HSSCVR Trigger: CCTCACACAGGAGGAATGGCAGCAAATGAAGCCTGC...AAACTTTAACAGTCTTAAAGAGGAAAGCCTTATATGTCCAGTAACTGGAGGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR CAA 72 bp | ACACGTGTTCCATCACTTCTGGACCTAACGGGTCTTTaGAGTATGAATTCTAGCACCAATGAGAAACCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TRVPSLLDLTGL*SMNSSTNEKPC Trigger: ACAGGGTTTCTCATTGGTGCTAGAATTCATACTCAAAAGACCCGTTAGGTCCAGAAGTGATGGAACACGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | TTATATAGGCATTTAACACTCTCTATGGAGGCTTGGGTCTTAGCTAAAGCTTTAGCAGGCTTCATTTGCTaGCATTCCTCCTGTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYRHLTLSMEAWVLAKALAGFIC*HSSCVR Trigger: CCTCACACAGGAGGAATGGCAGCAAATGAAGCCTGC...TAAAGCTTTAGCTAAGACCCAAGCCTCCATAGAGAGTGTTAAATGCCTATATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR CCA 90 bp | CCAATTTCTGGAGTTATAAGGTTTCTTTCTTGTAACACGTGTTCCATCACTTCTCTTCTCTGTCCCCTCTaGTCTTGCTGTCCTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PISGVIRFLSCNTCSITSLLCPL*SCCPQE Trigger: CTCTTGAGGACAGCAAGACCAGAGGGGACAGAGAAG...AGAAGTGATGGAACACGTGTTACAAGAAAGAAACCTTATAACTCCAGAAATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCTCCAGTTACTGGACATATAAGGCTTTCCTCTTTAAGACTGTTAAAGTTTTTCCTTACACTTATGTaGCCTCTCACTCCCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPPVTGHIRLSSLRLLKFFLTLM*PLTPLS Trigger: GCTCAGGGGAGTGAGAGGCCACATAAGTGTAAGGAA...AAACTTTAACAGTCTTAAAGAGGAAAGCCTTATATGTCCAGTAACTGGAGGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR TCA 90 bp | TTATATAGGCATTTAACACTCTCTATGGAGGCTTGGGTCTTAGCTAAAGCTTTACACAGGGACGTTTTCTaGCTTTTCTCAGAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYRHLTLSMEAWVLAKALHRDVF*LFSELQ Trigger: CTGCAGCTCTGAGAAAAGTCAGAAAACGTCCCTGTG...TAAAGCTTTAGCTAAGACCCAAGCCTCCATAGAGAGTGTTAAATGCCTATATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | TTATATAGGCATTTAACACTCTCTATGGAGGCTTGGGTCTTAGCTAAAGCTTTACTTCATTCTTCCTCTTaGGGCTTCTGGAGAGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYRHLTLSMEAWVLAKALLHSSS*GFWRAS Trigger: AGACGCTCTCCAGAAGCCGCAAGAGGAAGAATGAAG...TAAAGCTTTAGCTAAGACCCAAGCCTCCATAGAGAGTGTTAAATGCCTATATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCTTCCTTTACATTCATGGAACTTAAGAGTTTTTCATCAACAAAAGCCTCTCGACAGAGGTTACTaGAGCTTGCCTCAAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLPLHSWNLRVFHQQKPLDRGY*SLPQVS Trigger: GGACACTTGAGGCAAGCTGCAGTAACCTCTGTCGAG...AGGCTTTTGTTGATGAAAAACTCTTAAGTTCCATGAATGTAAAGGAAGGAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | CCAATTTCTGGAGTTATAAGGTTTCTTTCTTGTAACACGTGTTCCATCACTTCTTTGCCATGCTGTGCATaGTCACTGGCCTTTGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PISGVIRFLSCNTCSITSLPCCA*SLAFAL Trigger: TAAGGCAAAGGCCAGTGAGCATGCACAGCATGGCAA...AGAAGTGATGGAACACGTGTTACAAGAAAGAAACCTTATAACTCCAGAAATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCTTCCTTTACATTCATGGAACTTAAGAGTTTTTCATCAACAAAAGCCTGACTTTTCTCAGAGCTaGAGGGTTTTCCTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLLPLHSWNLRVFHQQKPDFSQS*RVFLQG Trigger: ACCCTGGAGGAAAACCCTGCAGCTCTGAGAAAAGTC...AGGCTTTTGTTGATGAAAAACTCTTAAGTTCCATGAATGTAAAGGAAGGAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | TTATATAGGCATTTAACACTCTCTATGGAGGCTTGGGTCTTAGCTAAAGCTTTATCTCACTGTCTTTTCTaGTTTCCTGGGGTCTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LYRHLTLSMEAWVLAKALSHCLF*FPGVSD Trigger: ATCCGAGACCCCAGGAAAGCAGAAAAGACAGTGAGA...TAAAGCTTTAGCTAAGACCCAAGCCTCCATAGAGAGTGTTAAATGCCTATATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCTTCCTTTACATTCATGGAACTTAAGAGTTTTTCATCAACAAAAGCCTATGGCGAAGAAGGTGTaGGTCAGAGATGAAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLLPLHSWNLRVFHQQKPMAKKV*VRDEAF Trigger: AAAGGCTTCATCTCTGACTCACACCTTCTTCGCCAT...AGGCTTTTGTTGATGAAAAACTCTTAAGTTCCATGAATGTAAAGGAAGGAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCTTCCTTTACATTCATGGAACTTAAGAGTTTTTCATCAACAAAAGCCTCTGTTTTTGAAGGCCTaGTCCTGTCTTCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLLPLHSWNLRVFHQQKPLFLKA*SCLLLP Trigger: AGGAAGAAGAAGACAGGACCAGGCCTTCAAAAACAG...AGGCTTTTGTTGATGAAAAACTCTTAAGTTCCATGAATGTAAAGGAAGGAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCTTCCTTTACATTCATGGAACTTAAGAGTTTTTCATCAACAAAAGCCTCTTGAAGATCACATCTaGTTTGGTGACTTGACAACC | + |
|
Preference number: 4 (lower is better) Translates to: FLLPLHSWNLRVFHQQKPLEDHI*FGDLTT Trigger: GGTTGTCAAGTCACCAAACCAGATGTGATCTTCAAG...AGGCTTTTGTTGATGAAAAACTCTTAAGTTCCATGAATGTAAAGGAAGGAGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCTTCCTTTACATTCATGGAACTTAAGAGTTTTTCATCAACAAAAGCCTGACACCCAATCAGGATaGCAAATTTTTGTCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: FLLPLHSWNLRVFHQQKPDTQSG*QIFVSF Trigger: GAATGAGACAAAAATTTGGCATCCTGATTGGGTGTC...AGGCTTTTGTTGATGAAAAACTCTTAAGTTCCATGAATGTAAAGGAAGGAGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| 3UTR CAA 72 bp | TTGTTAGTTTCTTTTCTGTTGGAGCTGAGTAGTTATTaGCTCTTCTGTTACTTAGAATACTCACTGGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LLVSFLLELSSY*LFCYLEYSLGI Trigger: AATTCCCAGTGAGTATTCTAAGTAACAGAAGAGCAAATAACTACTCAGCTCCAACAGAAAAGAAACTAACAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR CAA 90 bp | GGCACAGATGTGCTCCCTGCAGCCGGGAAGACCATGCCCCTGGATCTTGTTACTCTGTCCCCTCTGGTCTaGCTGTCCTCAAGAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GTDVLPAAGKTMPLDLVTLSPLV*LSSRVG Trigger: CCCCACTCTTGAGGACAGCAAGACCAGAGGGGACAG...AGTAACAAGATCCAGGGGCATGGTCTTCCCGGCTGCAGGGAGCACATCTGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS TCA 90 bp | TCAAGTGTCCCTCCTGATGGACCTGTTGACCCTCCAGCTCACGTGTaGCTTCTCTGTCCCCTCTGGTCTTGCTGTCCTCAAGAGTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSVPPDGPVDPPAHV*LLCPLWSCCPQEWG Trigger: GCCCCACTCTTGAGGACAGCAAGACCAGAGGGGACAGAGAAGTCACACGTGAGCTGGAGGGTCAACAGGTCCATCAGGAGGGACACTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074322.12 ENSMUST00000146074.8 ENSMUST00000148442.8 ENSMUST00000177931.2 |
||
| CDS-3UTR CAA 90 bp | CATGCCCACATGCTGCCTGACCTCTGTCACAACTGCTCTGCCGGAGCCTGTTTACTCCTGATGGACCTGTaGACCCTCCAGCTCACGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HAHMLPDLCHNCSAGACLLLMDL*TLQLTC Trigger: ACACGTGAGCTGGAGGGTCAACAGGTCCATCAGGAG...TAAACAGGCTCCGGCAGAGCAGTTGTGACAGAGGTCAGGCAGCATGTGGGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR CAA 90 bp | GGCACAGATGTGCTCCCTGCAGCCGGGAAGACCATGCCCCTGGATCTTGTTACTGCACAGCTATACACCTaGTCACAGTCCTTACACTCA | + |
|
Preference number: 5 (lower is better) Translates to: GTDVLPAAGKTMPLDLVTAQLYT*SQSLHS Trigger: TGAGTGTAAGGACTGTGACAAGGTGTATAGCTGTGC...AGTAACAAGATCCAGGGGCATGGTCTTCCCGGCTGCAGGGAGCACATCTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS CCA 90 bp | ACTGGCCTTTGCCTTACTGTGAAGTTGCTCACGTTCAATGGGAGGTaGCTGGCACAGGGACGTTTTCTGACTTTTCTCAGAGCTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TGLCLTVKLLTFNGR*LAQGRFLTFLRAAG Trigger: CCCTGCAGCTCTGAGAAAAGTCAGAAAACGTCCCTGTGCCAGCCACCTCCCATTGAACGTGAGCAACTTCACAGTAAGGCAAAGGCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074322.12 ENSMUST00000146074.8 ENSMUST00000148442.8 ENSMUST00000177931.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCCAGGGAGATGCTCCACCTCCCTAGCAGTCGAGGAAGTGCAAACAGAAGGTGCAATGTTTTAATTTaGGAACTGTCCTTGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QAREMLHLPSSRGSANRRCNVLI*ELSLAS Trigger: AGAAGCCAAGGACAGTTCCAAAATTAAAACATTGCA...CCTTCTGTTTGCACTTCCTCGACTGCTAGGGAGGTGGAGCATCTCCCTGGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGAAGGCACATTTTCAGCCCTGGCTAACACAGTTGAGAAACACACACTGGTCTTCATTCTTCCTCTaGCGGCTGGAGAGCGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KQKAHFQPWLTQLRNTHWSSFFL*RLESVS Trigger: GGAGACGCTCTCCAGCCGCAAGAGGAAGAATGAAGA...CCAGTGTGTGTTTCTCAACTGTGTTAGCCAGGGCTGAAAATGTGCCTTCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR CAA 90 bp | AGCACTTCAACCAAAGTCCTTTGCACAAAGCACCACACCGCTCAATTACTGGGCATTTTGGAACTGTCCTaGGCTTCTGTCCTAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: STSTKVLCTKHHTAQLLGILELS*ASVLDT Trigger: GGTGTCTAGGACAGAAGCCAAGGACAGTTCCAAAAT...GCCCAGTAATTGAGCGGTGTGGTGCTTTGTGCAAAGGACTTTGGTTGAAGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146074.8 |
||
| CDS-3UTR CAA 90 bp | CCTGAGGTATCACAGAGATTATGCAGTATAACGACTGACTTCTCTCCTCGGAGGATTTTGGAACTGTCCTaGGCTTCTGTCCTAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: PEVSQRLCSITTDFSPRRILELS*ASVLDT Trigger: GGTGTCTAGGACAGAAGCCAAGGACAGTTCCAAAAT...CCTCCGAGGAGAGAAGTCAGTCGTTATACTGCATAATCTCTGTGATACCTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR CAA 90 bp | TTATATAGGCATTTAACACTCTCTATGGAGGCTTGGGTCTTAGCTAAAGCTTTACTCCTGATGGACCTGTaGACCCTCCAGCTCACGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LYRHLTLSMEAWVLAKALLLMDL*TLQLTC Trigger: ACACGTGAGCTGGAGGGTCAACAGGTCCATCAGGAG...TAAAGCTTTAGCTAAGACCCAAGCCTCCATAGAGAGTGTTAAATGCCTATATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCTTCCTTTACATTCATGGAACTTAAGAGTTTTTCATCAACAAAAGCCTGCACAGCTATACACCTaGTCACAGTCCTTACACTCA | + |
|
Preference number: 5 (lower is better) Translates to: FLLPLHSWNLRVFHQQKPAQLYT*SQSLHS Trigger: TGAGTGTAAGGACTGTGACAAGGTGTATAGCTGTGC...AGGCTTTTGTTGATGAAAAACTCTTAAGTTCCATGAATGTAAAGGAAGGAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCTCCAGTTACTGGACATATAAGGCTTTCCTCTTTAAGACTGTTAAAGTTTTGCAATGTTTTAATTTaGGAACTGTCCTTGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VPPVTGHIRLSSLRLLKFCNVLI*ELSLAS Trigger: AGAAGCCAAGGACAGTTCCAAAATTAAAACATTGCA...AAACTTTAACAGTCTTAAAGAGGAAAGCCTTATATGTCCAGTAACTGGAGGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000148442.8 |
||
| CDS GCA 72 bp | ATACACCTTGTCACAGTCCTTACACTCAAAGCGCCGTaGCCCAGCATGCGTGAGCAGGTGCAGGCTGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: IHLVTVLTLKAP*PSMREQVQAEL Trigger: CAGCTCAGCCTGCACCTGCTCACGCATGCTGGGGCACGGCGCTTTGAGTGTAAGGACTGTGACAAGGTGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074322.12 ENSMUST00000146074.8 ENSMUST00000148442.8 ENSMUST00000177931.2 |
||
| CDS TCA 72 bp | CCTCCTGATGGACCTGTTGACCCTCCAGCTCACGTGTaGCTTCTCTGTCCCCTCTGGTCTTGCTGTCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: PPDGPVDPPAHV*LLCPLWSCCPQ Trigger: TTGAGGACAGCAAGACCAGAGGGGACAGAGAAGTCACACGTGAGCTGGAGGGTCAACAGGTCCATCAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074322.12 ENSMUST00000146074.8 ENSMUST00000148442.8 ENSMUST00000177931.2 |
||
| CDS GCA 72 bp | GCACTGGACAGAATCAGGCCTCTCGACAGAGGTTACTaGAGCTTGCCTCAAGTGTCCCTCCTGATGGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALDRIRPLDRGY*SLPQVSLLMDL Trigger: CAGGTCCATCAGGAGGGACACTTGAGGCAAGCTGCAGTAACCTCTGTCGAGAGGCCTGATTCTGTCCAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074322.12 ENSMUST00000146074.8 ENSMUST00000148442.8 ENSMUST00000177931.2 |
||
| CDS CCA 72 bp | TTCTCCCCAGTGTGTGACATCTGGTGGAGAGCGAGCTaGGAGGCACAGCTATACACCTTGTCACAGTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: FSPVCDIWWRAS*EAQLYTLSQSL Trigger: TAAGGACTGTGACAAGGTGTATAGCTGTGCCTCCCAGCTCGCTCTCCACCAGATGTCACACACTGGGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074322.12 ENSMUST00000146074.8 ENSMUST00000148442.8 ENSMUST00000177931.2 |
||
| CDS GCA 72 bp | CATGTCCTTAAAGGCAAAACTCTTCATTCTTCCTCTTaGGGCTGGAGAGCGTCTCCAAAACATCTCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HVLKGKTLHSSS*GWRASPKHLFL Trigger: GAGGAAGAGATGTTTTGGAGACGCTCTCCAGCCGCAAGAGGAAGAATGAAGAGTTTTGCCTTTAAGGACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000177931.2 |
||
| CDS CCA 72 bp | AAAGGCAAAACTCTTCATTCTTCCTCTTGCGGCTTCTaGAGAGCGTCTCCAAAACATCTCTTCCTCCAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KGKTLHSSSCGF*RASPKHLFLQY Trigger: GTACTGGAGGAAGAGATGTTTTGGAGACGCTCTCCAGAAGCCGCAAGAGGAAGAATGAAGAGTTTTGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074322.12 ENSMUST00000148442.8 ENSMUST00000207940.2 |
||
| CDS CCA 72 bp | CTTAAAGGCAAAACTCTTCATTCTTCCTCTTGCGGCTaGAGAGCGTCTCCAAAACATCTCTTCCTCCAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LKGKTLHSSSCG*RASPKHLFLQY Trigger: GTACTGGAGGAAGAGATGTTTTGGAGACGCTCTCCAGCCGCAAGAGGAAGAATGAAGAGTTTTGCCTTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146074.8 ENSMUST00000177931.2 |
||
| CDS GCA 72 bp | CATGTCCTTAAAGGCAAAACTCTTCATTCTTCCTCTTaGGGCTTCTGGAGAGCGTCTCCAAAACATCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HVLKGKTLHSSS*GFWRASPKHLF Trigger: GAAGAGATGTTTTGGAGACGCTCTCCAGAAGCCGCAAGAGGAAGAATGAAGAGTTTTGCCTTTAAGGACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074322.12 ENSMUST00000148442.8 ENSMUST00000207940.2 |
||
| CDS GCA 72 bp | CTGTCCTTGGCTTCTGTCCTAGACACCCAATCAGGATaGCAAATTTTTGTCTCATTCCTCATAACCATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSLASVLDTQSG*QIFVSFLITIQ Trigger: CTGGATGGTTATGAGGAATGAGACAAAAATTTGGCATCCTGATTGGGTGTCTAGGACAGAAGCCAAGGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074322.12 ENSMUST00000146074.8 ENSMUST00000148442.8 ENSMUST00000177931.2 |
||