Pregenerated sensors for ZFP563 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067424Ensembl transcript IDs: ENSMUST00000131722.9, ENSMUST00000140829.2, ENSMUST00000153072.8
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGATGGAAGCAGGATCCCCCAAGTTCACAGGCCAGCTAGCAGATaGAGCAGAAACAAGAGAGACCCTGCCTCAGCAAGATGGAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: GDGSRIPQVHRPASR*SRNKRDPASARWKV Trigger: CACCTTCCATCTTGCTGAGGCAGGGTCTCTCTTGTTTCTGCTGCATCTGCTAGCTGGCCTGTGAACTTGGGGGATCCTGCTTCCATCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CCA 90 bp | GCTAGCAGATGCAGCAGAAACAAGAGAGACCCTGCCTCAGCAAGATaGAAGGTGGCAACTGACACTCAAAGCTGCCTTCTGACCTGCACA | + |
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Preference number: 1 (lower is better) Translates to: ASRCSRNKRDPASAR*KVATDTQSCLLTCT Trigger: TGTGCAGGTCAGAAGGCAGCTTTGAGTGTCAGTTGCCACCTTCCATCTTGCTGAGGCAGGGTCTCTCTTGTTTCTGCTGCATCTGCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR TCA 90 bp | CAGAAACAAGAGAGACCCTGCCTCAGCAAGATGGAAGGTGGCAACTaGCACTCAAAGCTGCCTTCTGACCTGCACACATGTTCTGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: QKQERPCLSKMEGGN*HSKLPSDLHTCSAA Trigger: TGCTGCAGAACATGTGTGCAGGTCAGAAGGCAGCTTTGAGTGTCAGTTGCCACCTTCCATCTTGCTGAGGCAGGGTCTCTCTTGTTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR GCA 90 bp | GACCCTGCCTCAGCAAGATGGAAGGTGGCAACTGACACTCAAAGCTaGCTTCTGACCTGCACACATGTTCTGCAGCACATACATGTTTAC | + |
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Preference number: 1 (lower is better) Translates to: DPASARWKVATDTQS*LLTCTHVLQHIHVY Trigger: GTAAACATGTATGTGCTGCAGAACATGTGTGCAGGTCAGAAGGCAGCTTTGAGTGTCAGTTGCCACCTTCCATCTTGCTGAGGCAGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR TCA 90 bp | GTAGCTGCCCACTCTGAAAAGCTAAATGCCTTAGGGGGCCCAATCTaGGGCCAAATACTGGAAGCTCCTGAAGAGTCACTAGAACTGAGT | + |
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Preference number: 1 (lower is better) Translates to: VAAHSEKLNALGGPI*GQILEAPEESLELS Trigger: ACTCAGTTCTAGTGACTCTTCAGGAGCTTCCAGTATTTGGCCTCAGATTGGGCCCCCTAAGGCATTTAGCTTTTCAGAGTGGGCAGCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR TCA 90 bp | AAAACCCAGATGCAGCAATCGCATACCTGTAATCCCATATTTCTATaGCAAGATAGGAGATGGAAGCAGGATCCCCCAAGTTCACAGGCC | + |
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Preference number: 1 (lower is better) Translates to: KTQMQQSHTCNPIFL*QDRRWKQDPPSSQA Trigger: GGCCTGTGAACTTGGGGGATCCTGCTTCCATCTCCTATCTTGTCATAGAAATATGGGATTACAGGTATGCGATTGCTGCATCTGGGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR GCA 90 bp | ATGGCTCACTCAGCCTGCTTTCTTATACAGCACCTACCCAGGAGTTaGACTACCCACAGTAGCCCTGTCCCATTAAAGGAATATATATAC | + |
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Preference number: 1 (lower is better) Translates to: MAHSACFLIQHLPRS*TTHSSPVPLKEYIY Trigger: GTATATATATTCCTTTAATGGGACAGGGCTACTGTGGGTAGTGCAACTCCTGGGTAGGTGCTGTATAAGAAAGCAGGCTGAGTGAGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR GCA 90 bp | AGTAGCATCAATAGATACACTCAGACAGAAAGGAAGGGAGGTATGTaGCTGCTGCTTTTCCTGAGACTTCATCTAGGACCATGTTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: SSINRYTQTERKGGM*LLLFLRLHLGPCWE Trigger: CTCCCAACATGGTCCTAGATGAAGTCTCAGGAAAAGCAGCAGGCACATACCTCCCTTCCTTTCTGTCTGAGTGTATCTATTGATGCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR TCA 90 bp | TATGCTCATAGACTCCAGTCAGGAACTGGCACTTCCAACAGTGGGTaGATCTTCCCACCTCATTTATGCAATCAAGATAACTGTCCACAG | + |
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Preference number: 1 (lower is better) Translates to: YAHRLQSGTGTSNSG*IFPPHLCNQDNCPQ Trigger: CTGTGGACAGTTATCTTGATTGCATAAATGAGGTGGGAAGATTCACCCACTGTTGGAAGTGCCAGTTCCTGACTGGAGTCTATGAGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CCA 90 bp | TGTGTTTTCCCCTCCAAGTCACTGCCCTACATATCATTCCTTCTATaGAAATTTCCTCACCAATATACAGGTGCGTTTCATCAGTCAGGT | + |
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Preference number: 1 (lower is better) Translates to: CVFPSKSLPYISFLL*KFPHQYTGAFHQSG Trigger: ACCTGACTGATGAAACGCACCTGTATATTGGTGAGGAAATTTCCATAGAAGGAATGATATGTAGGGCAGTGACTTGGAGGGGAAAACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR GCA 90 bp | GGAGTTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTaGCCTACATATCATTCCTTCTATGGAAATTTCCTCACCAATATA | + |
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Preference number: 1 (lower is better) Translates to: GVATHIESVFSPPSH*PTYHSFYGNFLTNI Trigger: TATATTGGTGAGGAAATTTCCATAGAAGGAATGATATGTAGGGCAGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CCA 90 bp | TCTGAGCCATTTATTACCCTGTTTGGACTGCGTTGTAGCTTCCCATaGGTTTTAATCAACAGACATGGCAATAATAAGGAAATCCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: SEPFITLFGLRCSFP*VLINRHGNNKEIQE Trigger: TTCCTGGATTTCCTTATTATTGCCATGTCTGTTGATTAAAACCCATGGGAAGCTACAACGCAGTCCAAACAGGGTAATAAATGGCTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR TCA 90 bp | AACACTCAGGTAATTAAGCTATTTAATGTGTCATTATCAAACAGGTaGTTTTGTCCAACAGGTGTTATGGAAATGAGCTTGTCACTGCAG | + |
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Preference number: 1 (lower is better) Translates to: NTQVIKLFNVSLSNR*FCPTGVMEMSLSLQ Trigger: CTGCAGTGACAAGCTCATTTCCATAACACCTGTTGGACAAAATCACCTGTTTGATAATGACACATTAAATAGCTTAATTACCTGAGTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR GCA 90 bp | CTTGCTCCTCATGGCTCACTCAGCCTGCTTTCTTATACAGCACCTACCCAGGAGATGCCCCCACAGACTTaGCTACAGGCCAATCTAATG | + |
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Preference number: 2 (lower is better) Translates to: LAPHGSLSLLSYTAPTQEMPPQT*LQANLM Trigger: CATTAGATTGGCCTGTAGGCAAGTCTGTGGGGGCAT...CTCCTGGGTAGGTGCTGTATAAGAAAGCAGGCTGAGTGAGCCATGAGGAGCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCATGGCTCACTCAGCCTGCTTTCTTATACAGCACCTACCCAGGAGTTGCACTCCAGTTCAAAGGAATaGCTGGGTGTTCCTCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PHGSLSLLSYTAPTQELHSSSKE*LGVPPG Trigger: ACCAGGAGGAACACCCAGCCATTCCTTTGAACTGGA...GTGCAACTCCTGGGTAGGTGCTGTATAAGAAAGCAGGCTGAGTGAGCCATGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR CCA 90 bp | CTCATAGACTCCAGTCAGGAACTGGCACTTCCAACAGTGGGTGAATCTTCCCACTTGGCTTGCTCCTCATaGCTCACTCAGCCTGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: LIDSSQELALPTVGESSHLACSS*LTQPAF Trigger: GAAAGCAGGCTGAGTGAGCCATGAGGAGCAAGCCAA...GTGGGAAGATTCACCCACTGTTGGAAGTGCCAGTTCCTGACTGGAGTCTATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR TCA 90 bp | CTCATAGACTCCAGTCAGGAACTGGCACTTCCAACAGTGGGTGAATCTTCCCACGAACATCTCCATTGCTaGATGGCAGTCTCATTCCCC | + |
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Preference number: 2 (lower is better) Translates to: LIDSSQELALPTVGESSHEHLHC*MAVSFP Trigger: GGGGAATGAGACTGCCATTCAGCAATGGAGATGTTC...GTGGGAAGATTCACCCACTGTTGGAAGTGCCAGTTCCTGACTGGAGTCTATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR TCA 90 bp | CTCATAGACTCCAGTCAGGAACTGGCACTTCCAACAGTGGGTGAATCTTCCCACCATCCCTGGCTGTTCTaGAACTCACTATGTCAACCA | + |
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Preference number: 2 (lower is better) Translates to: LIDSSQELALPTVGESSHHPWLF*NSLCQP Trigger: TGGTTGACATAGTGAGTTTCAGAACAGCCAGGGATG...GTGGGAAGATTCACCCACTGTTGGAAGTGCCAGTTCCTGACTGGAGTCTATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR CCA 90 bp | CCATGTTGGGAGTTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTACTCCAGTCAGGAACTaGCACTTCCAACAGTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PCWELLPTLNLCFPLQVTTPVRN*HFQQWV Trigger: CACCCACTGTTGGAAGTGCCAGTTCCTGACTGGAGT...AGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAACTCCCAACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR TCA 90 bp | TTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTGCCCTACATATCCCAAGGAGGAAGACTTaGGTCTTGGCTTGCTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LLPTLNLCFPLQVTALHIPRRKT*VLACSS Trigger: TGAGGAGCAAGCCAAGACTCAAGTCTTCCTCCTTGG...GATATGTAGGGCAGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR GCA 90 bp | TTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTGCCCTACATATCTTACCCTGTTTGGACTaGGTTGTAGCTTCCCATGGG | + |
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Preference number: 2 (lower is better) Translates to: LLPTLNLCFPLQVTALHILPCLD*VVASHG Trigger: CCCATGGGAAGCTACAACGCAGTCCAAACAGGGTAA...GATATGTAGGGCAGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR CCA 90 bp | CCATGTTGGGAGTTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTAGTCTCATTCCCCACTaGTCAAGTGGAACTGTCACT | + |
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Preference number: 2 (lower is better) Translates to: PCWELLPTLNLCFPLQVTSLIPH*SSGTVT Trigger: AGTGACAGTTCCACTTGACCAGTGGGGAATGAGACT...AGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAACTCCCAACATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR CCA 90 bp | CTCATAGACTCCAGTCAGGAACTGGCACTTCCAACAGTGGGTGAATCTTCCCACTACACCCAAATCAACTaGTTCTTTACCCTGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: LIDSSQELALPTVGESSHYTQIN*FFTLRS Trigger: GCTTCTCAGGGTAAAGAACCAGTTGATTTGGGTGTA...GTGGGAAGATTCACCCACTGTTGGAAGTGCCAGTTCCTGACTGGAGTCTATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR TCA 90 bp | TTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTGCCCTACATATCCTTGGAAGTAGGATCTaGAGAAGAGACCAAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LLPTLNLCFPLQVTALHILGSRI*RRDQGG Trigger: TCCTCCTTGGTCTCTTCTTCAGATCCTACTTCCAAG...GATATGTAGGGCAGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CAA 90 bp | TTCCTGAGACTTCATCTAGGACCATGTTGGGAGTTGCTACCCACATaGAATCTGTGTTTTCCCCTCCAAGTCACTGCCCTACATATCATT | + |
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Preference number: 2 (lower is better) Translates to: FLRLHLGPCWELLPT*NLCFPLQVTALHII Trigger: AATGATATGTAGGGCAGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAACTCCCAACATGGTCCTAGATGAAGTCTCAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR CCA 90 bp | TTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTGCCCTACATATCGGGTGTTCCTCCTGGTaGAACCATAATATCTACAGA | + |
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Preference number: 2 (lower is better) Translates to: LLPTLNLCFPLQVTALHIGCSSW*NHNIYR Trigger: TCTGTAGATATTATGGTTCCACCAGGAGGAACACCC...GATATGTAGGGCAGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR TCA 90 bp | TTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTGCCCTACATATCAGAAACAGTGCTGTATaGGATGCCAATTTAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LLPTLNLCFPLQVTALHIRNSAV*DANLEH Trigger: GTGCTCTAAATTGGCATCTCATACAGCACTGTTTCT...GATATGTAGGGCAGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR GCA 90 bp | CTCATAGACTCCAGTCAGGAACTGGCACTTCCAACAGTGGGTGAATCTTCCCACGAACCTTTCATAATGTaGATTTATGGTTCCCTACTA | + |
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Preference number: 2 (lower is better) Translates to: LIDSSQELALPTVGESSHEPFIM*IYGSLL Trigger: TAGTAGGGAACCATAAATGCACATTATGAAAGGTTC...GTGGGAAGATTCACCCACTGTTGGAAGTGCCAGTTCCTGACTGGAGTCTATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CAA 90 bp | TTGGCTTATAATTCCATCACTGTGGGAAGTCAATATGGCAGTAACTaGAGCAGCTCTCACACCCATAGTCAAAAGCAGAGAACAGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LAYNSITVGSQYGSN*SSSHTHSQKQRTVS Trigger: ACTCACTGTTCTCTGCTTTTGACTATGGGTGTGAGAGCTGCTCAAGTTACTGCCATATTGACTTCCCACAGTGATGGAATTATAAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR GCA 90 bp | CCATGTTGGGAGTTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTTTCCCACCTCATTTATaGAATCAAGATAACTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: PCWELLPTLNLCFPLQVTFPPHL*NQDNCP Trigger: TGGACAGTTATCTTGATTGCATAAATGAGGTGGGAA...AGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAACTCCCAACATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR CCA 90 bp | TTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTGCCCTACATATCCGTTGTAGCTTCCCATaGGTTTTAATCAACAGACAT | + |
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Preference number: 2 (lower is better) Translates to: LLPTLNLCFPLQVTALHIRCSFP*VLINRH Trigger: ATGTCTGTTGATTAAAACCCATGGGAAGCTACAACG...GATATGTAGGGCAGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CAA 90 bp | TACACCCAAATCAACTGGTTCTTTACCCTGAGAAGCCATTCAAACTaGCATTCTGGAGTATCTGAGCCATTTATTACCCTGTTTGGACTG | + |
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Preference number: 2 (lower is better) Translates to: YTQINWFFTLRSHSN*HSGVSEPFITLFGL Trigger: CAGTCCAAACAGGGTAATAAATGGCTCAGATACTCCAGAATGCAAGTTTGAATGGCTTCTCAGGGTAAAGAACCAGTTGATTTGGGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR GCA 90 bp | GGACTGCGTTGTAGCTTCCCATGGGTTTTAATCAACAGACATGGCAATAATAAGCAGTGCTGTATGAGATaGCAATTTAGAGCACATCCA | + |
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Preference number: 2 (lower is better) Translates to: GLRCSFPWVLINRHGNNKQCCMR*QFRAHP Trigger: TGGATGTGCTCTAAATTGGCATCTCATACAGCACTG...CTTATTATTGCCATGTCTGTTGATTAAAACCCATGGGAAGCTACAACGCAGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR GCA 90 bp | GGACTGCGTTGTAGCTTCCCATGGGTTTTAATCAACAGACATGGCAATAATAAGACTCTCTTGCTCCACTaGTTAAGCAAACTTCATAGA | + |
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Preference number: 2 (lower is better) Translates to: GLRCSFPWVLINRHGNNKTLLLH*LSKLHR Trigger: TCTATGAAGTTTGCTTAAGCAGTGGAGCAAGAGAGT...CTTATTATTGCCATGTCTGTTGATTAAAACCCATGGGAAGCTACAACGCAGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CAA 90 bp | TCCAGAATCGAACCAAGAAAGTTATTAAAGAAGATATTTACTAGATaGTCACATATGATAGGGGCTGGTGATCCAACAATGCTTGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: SRIEPRKLLKKIFTR*SHMIGAGDPTMLGC Trigger: ACAACCAAGCATTGTTGGATCACCAGCCCCTATCATATGTGACAATCTAGTAAATATCTTCTTTAATAACTTTCTTGGTTCGATTCTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR TCA 72 bp | GAGAGACCCTGCCTCAGCAAGATGGAAGGTGGCAACTaGCACTCAAAGCTGCCTTCTGACCTGCACACATGT | + |
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Preference number: 3 (lower is better) Translates to: ERPCLSKMEGGN*HSKLPSDLHTC Trigger: ACATGTGTGCAGGTCAGAAGGCAGCTTTGAGTGTCAGTTGCCACCTTCCATCTTGCTGAGGCAGGGTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR GCA 72 bp | TTGAGTCTTGGCTTGCTCCTCATGGCTCACTCAGCCTaGTTTCTTATACAGCACCTACCCAGGAGTTGCACT | + |
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Preference number: 3 (lower is better) Translates to: LSLGLLLMAHSA*FLIQHLPRSCT Trigger: AGTGCAACTCCTGGGTAGGTGCTGTATAAGAAAGCAGGCTGAGTGAGCCATGAGGAGCAAGCCAAGACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR TCA 72 bp | GGTCTTGAACTAACAGACACATTTGCCTTTGCCTCCTaGGCGCTGGCATTAAAGGAATACGCCATCACACCC | + |
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Preference number: 3 (lower is better) Translates to: GLELTDTFAFAS*ALALKEYAITP Trigger: GGGTGTGATGGCGTATTCCTTTAATGCCAGCGCTCAGGAGGCAAAGGCAAATGTGTCTGTTAGTTCAAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR GCA 72 bp | TCAGCCTGCTTTCTTATACAGCACCTACCCAGGAGTTaGACTACCCACAGTAGCCCTGTCCCATTAAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SACFLIQHLPRS*TTHSSPVPLKE Trigger: TTCCTTTAATGGGACAGGGCTACTGTGGGTAGTGCAACTCCTGGGTAGGTGCTGTATAAGAAAGCAGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR GCA 72 bp | TCAGCAAGATGGAAGGTGGCAACTGACACTCAAAGCTaGCTTCTGACCTGCACACATGTTCTGCAGCACATA | + |
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Preference number: 3 (lower is better) Translates to: SARWKVATDTQS*LLTCTHVLQHI Trigger: TATGTGCTGCAGAACATGTGTGCAGGTCAGAAGGCAGCTTTGAGTGTCAGTTGCCACCTTCCATCTTGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR TCA 72 bp | CTCAAGTCCCGGACCCATAGGAGAAACAGTGCTGTATaGGATGCCAATTTAGAGCACATCCATCATCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: LKSRTHRRNSAV*DANLEHIHHPG Trigger: TCCAGGATGATGGATGTGCTCTAAATTGGCATCTCATACAGCACTGTTTCTCCTATGGGTCCGGGACTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR TCA 72 bp | CACTCTGAAAAGCTAAATGCCTTAGGGGGCCCAATCTaGGGCCAAATACTGGAAGCTCCTGAAGAGTCACTA | + |
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Preference number: 3 (lower is better) Translates to: HSEKLNALGGPI*GQILEAPEESL Trigger: TAGTGACTCTTCAGGAGCTTCCAGTATTTGGCCTCAGATTGGGCCCCCTAAGGCATTTAGCTTTTCAGAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR TCA 72 bp | GATGGAAGGTGGCAACTGACACTCAAAGCTGCCTTCTaGCCTGCACACATGTTCTGCAGCACATACATGTTT | + |
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Preference number: 3 (lower is better) Translates to: DGRWQLTLKAAF*PAHMFCSTYMF Trigger: AAACATGTATGTGCTGCAGAACATGTGTGCAGGTCAGAAGGCAGCTTTGAGTGTCAGTTGCCACCTTCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR GCA 72 bp | AAGGTGGCAACTGACACTCAAAGCTGCCTTCTGACCTaGACACATGTTCTGCAGCACATACATGTTTACACA | + |
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Preference number: 3 (lower is better) Translates to: KVATDTQSCLLT*THVLQHIHVYT Trigger: TGTGTAAACATGTATGTGCTGCAGAACATGTGTGCAGGTCAGAAGGCAGCTTTGAGTGTCAGTTGCCACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CCA 72 bp | GTATGTGTGGGTGTCTTAGCTTCCAGTTCAAAGGAATaGCTGGGTGTTCCTCCTGGTGGAACCATAATATCT | + |
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Preference number: 3 (lower is better) Translates to: VCVGVLASSSKE*LGVPPGGTIIS Trigger: AGATATTATGGTTCCACCAGGAGGAACACCCAGCCATTCCTTTGAACTGGAAGCTAAGACACCCACACATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CCA 72 bp | CTGCTGCTTTTCCTGAGACTTCATCTAGGACCATGTTaGGAGTTGCTACCCACATTGAATCTGTGTTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: LLLFLRLHLGPC*ELLPTLNLCFP Trigger: GGGAAAACACAGATTCAATGTGGGTAGCAACTCCCAACATGGTCCTAGATGAAGTCTCAGGAAAAGCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR CAA 90 bp | CTCATAGACTCCAGTCAGGAACTGGCACTTCCAACAGTGGGTGAATCTTCCCACCTAGTGCCAACTCATTaGTTGTTAAGATATTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LIDSSQELALPTVGESSHLVPTH*LLRYLL Trigger: CAGCAAATATCTTAACAACAAATGAGTTGGCACTAG...GTGGGAAGATTCACCCACTGTTGGAAGTGCCAGTTCCTGACTGGAGTCTATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR TCA 72 bp | AGACTCCAGTCAGGAACTGGCACTTCCAACAGTGGGTaGATCTTCCCACCTCATTTATGCAATCAAGATAAC | + |
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Preference number: 3 (lower is better) Translates to: RLQSGTGTSNSG*IFPPHLCNQDN Trigger: GTTATCTTGATTGCATAAATGAGGTGGGAAGATTCACCCACTGTTGGAAGTGCCAGTTCCTGACTGGAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CCA 72 bp | ACATCTCCATTGCTGAATGGCAGTCTCATTCCCCACTaGTCAAGTGGAACTGTCACTCCAGTAACAATAACA | + |
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Preference number: 3 (lower is better) Translates to: TSPLLNGSLIPH*SSGTVTPVTIT Trigger: TGTTATTGTTACTGGAGTGACAGTTCCACTTGACCAGTGGGGAATGAGACTGCCATTCAGCAATGGAGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR CAA 90 bp | TTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTGCCCTACATATCATCAGAACATCTCCATaGCTGAATGGCAGTCTCATT | + |
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Preference number: 3 (lower is better) Translates to: LLPTLNLCFPLQVTALHIIRTSP*LNGSLI Trigger: AATGAGACTGCCATTCAGCAATGGAGATGTTCTGAT...GATATGTAGGGCAGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR CAA 90 bp | TTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTGCCCTACATATCAGAAGCCATTCAAACTaGCATTCTGGAGTATCTGAG | + |
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Preference number: 3 (lower is better) Translates to: LLPTLNLCFPLQVTALHIRSHSN*HSGVSE Trigger: CTCAGATACTCCAGAATGCAAGTTTGAATGGCTTCT...GATATGTAGGGCAGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR CAA 90 bp | TTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTGCCCTACATATCAGGTGCCAAAGTCCCTaGAGGAAAACTTATTCACTT | + |
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Preference number: 3 (lower is better) Translates to: LLPTLNLCFPLQVTALHIRCQSP*RKTYSL Trigger: AAGTGAATAAGTTTTCCTCAAGGGACTTTGGCACCT...GATATGTAGGGCAGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR-3UTR CAA 90 bp | CCATGTTGGGAGTTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTGTACAAATGAAAACATaGTTTCCACAGAATAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: PCWELLPTLNLCFPLQVTVQMKT*FPQNRC Trigger: GCACCTATTCTGTGGAAACAATGTTTTCATTTGTAC...AGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAACTCCCAACATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR GCA 72 bp | ACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTaGCCTACATATCATTCCTTCTATGGAAATTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: THIESVFSPPSH*PTYHSFYGNFL Trigger: GAGGAAATTTCCATAGAAGGAATGATATGTAGGGCAGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR TCA 72 bp | ATAGAGAATCTCCCAAGTGCTAGGGGGTTAAAGGTATaGTCACCATGGCAGGCTTTTCAATTTGGGTTTAAT | + |
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Preference number: 3 (lower is better) Translates to: IENLPSARGLKV*SPWQAFQFGFN Trigger: ATTAAACCCAAATTGAAAAGCCTGCCATGGTGATCATACCTTTAACCCCCTAGCACTTGGGAGATTCTCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CCA 72 bp | TTTATTACCCTGTTTGGACTGCGTTGTAGCTTCCCATaGGTTTTAATCAACAGACATGGCAATAATAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: FITLFGLRCSFP*VLINRHGNNKE Trigger: TTCCTTATTATTGCCATGTCTGTTGATTAAAACCCATGGGAAGCTACAACGCAGTCCAAACAGGGTAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CCA 72 bp | GGGCCCATCTCACAGGTGATTCTAGATTTGTCACATTaGCAATCAACACTATCAAGTATAAAAATAAACATA | + |
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Preference number: 3 (lower is better) Translates to: GPISQVILDLSH*QSTLSSIKINI Trigger: TATGTTTATTTTTATACTTGATAGTGTTGATTGCCAATGTGACAAATCTAGAATCACCTGTGAGATGGGCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR GCA 72 bp | CATGTACAAATGAAAACATTGTTTCCACAGAATAGGTaGCAAAGTCCCTTGAGGAAAACTTATTCACTTATT | + |
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Preference number: 3 (lower is better) Translates to: HVQMKTLFPQNR*QSPLRKTYSLI Trigger: AATAAGTGAATAAGTTTTCCTCAAGGGACTTTGGCACCTATTCTGTGGAAACAATGTTTTCATTTGTACATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR GCA 72 bp | GACTTTCAAAGGGCGATCTTAAACTGGATATCAATATaGAATGTACTTTTGGATGATCTTGATGCATACAAA | + |
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Preference number: 3 (lower is better) Translates to: DFQRAILNWISI*NVLLDDLDAYK Trigger: TTTGTATGCATCAAGATCATCCAAAAGTACATTGCATATTGATATCCAGTTTAAGATCGCCCTTTGAAAGTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| CDS-3UTR TCA 90 bp | CTTGCTCCTCATGGCTCACTCAGCCTGCTTTCTTATACAGCACCTACCCAGGAGGGGAACCACAACGAGTaGAGGCTTTCCCACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: LAPHGSLSLLSYTAPTQEGNHNE*RLSHTA Trigger: AGCAGTGTGGGAAAGCCTTCACTCGTTGTGGTTCCC...CTCCTGGGTAGGTGCTGTATAAGAAAGCAGGCTGAGTGAGCCATGAGGAGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CAA 72 bp | GAAGTAGGATCTGAAGAAGAGACCAAGGAGGAAGACTaGAGTCTTGGCTTGCTCCTCATGGCTCACTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: EVGSEEETKEED*SLGLLLMAHSA Trigger: GGCTGAGTGAGCCATGAGGAGCAAGCCAAGACTCAAGTCTTCCTCCTTGGTCTCTTCTTCAGATCCTACTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CAA 72 bp | CTTCATCTAGGACCATGTTGGGAGTTGCTACCCACATaGAATCTGTGTTTTCCCCTCCAAGTCACTGCCCTA | + |
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Preference number: 4 (lower is better) Translates to: LHLGPCWELLPT*NLCFPLQVTAL Trigger: TAGGGCAGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAACTCCCAACATGGTCCTAGATGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| CDS-3UTR TCA 90 bp | CTTGCTCCTCATGGCTCACTCAGCCTGCTTTCTTATACAGCACCTACCCAGGAGTACTCGACAGGTACTTaGAGAAATGAAACATTTGCC | + |
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Preference number: 4 (lower is better) Translates to: LAPHGSLSLLSYTAPTQEYSTGT*RNETFA Trigger: GGCAAATGTTTCATTTCTTCAAGTACCTGTCGAGTA...CTCCTGGGTAGGTGCTGTATAAGAAAGCAGGCTGAGTGAGCCATGAGGAGCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| CDS-3UTR TCA 90 bp | TTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTGCCCTACATATCCGTGGAAGTGAACTTTaGCCAGTGAAAGCTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LLPTLNLCFPLQVTALHIRGSEL*PVKAFP Trigger: TGGGAAAGCTTTCACTGGTCAAAGTTCACTTCCACG...GATATGTAGGGCAGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| CDS-3UTR TCA 90 bp | CCATGTTGGGAGTTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTTCTTCGAACCTTACTTaGAGAAGAAAAGGCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PCWELLPTLNLCFPLQVTSSNLT*RRKGFP Trigger: GGGAAAGCCTTTTCTTCTTCAAGTAAGGTTCGAAGA...AGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAACTCCCAACATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| CDS-3UTR CCA 90 bp | CCATTGCTGAATGGCAGTCTCATTCCCCACTGGTCAAGTGGAACTGTCACTCCAGTTCATAACAGTATCTaGAAACTCACTGAAGATTCC | + |
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Preference number: 4 (lower is better) Translates to: PLLNGSLIPHWSSGTVTPVHNSI*KLTEDS Trigger: GGAATCTTCAGTGAGTTTCCAGATACTGTTATGAAC...TGGAGTGACAGTTCCACTTGACCAGTGGGGAATGAGACTGCCATTCAGCAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| CDS-3UTR CCA 90 bp | CTCATAGACTCCAGTCAGGAACTGGCACTTCCAACAGTGGGTGAATCTTCCCACTATACGGTTTCTCAATaGTGTGGGTATTTCCATGTT | + |
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Preference number: 4 (lower is better) Translates to: LIDSSQELALPTVGESSHYTVSQ*CGYFHV Trigger: AACATGGAAATACCCACACCATTGAGAAACCGTATA...GTGGGAAGATTCACCCACTGTTGGAAGTGCCAGTTCCTGACTGGAGTCTATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| CDS-3UTR TCA 90 bp | CCATGTTGGGAGTTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTCACCGTTTTACTCCATaGGAGGTTTTCTTGTTCATA | + |
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Preference number: 4 (lower is better) Translates to: PCWELLPTLNLCFPLQVTHRFTP*EVFLFI Trigger: TATGAACAAGAAAACCTCTCATGGAGTAAAACGGTG...AGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAACTCCCAACATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| CDS-3UTR CCA 90 bp | CTCATAGACTCCAGTCAGGAACTGGCACTTCCAACAGTGGGTGAATCTTCCCACGAATTCTCTCTAGCATaGGTCTTTTCATGTATTCTA | + |
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Preference number: 4 (lower is better) Translates to: LIDSSQELALPTVGESSHEFSLA*VFSCIL Trigger: TAGAATACATGAAAAGACCCATGCTAGAGAGAATTC...GTGGGAAGATTCACCCACTGTTGGAAGTGCCAGTTCCTGACTGGAGTCTATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CAA 72 bp | CCAACAATGCTTGGTTGTACCAGAGAAGTAGAGATCTaGGTAGCTGCCCACTCTGAAAAGCTAAATGCCTTA | + |
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Preference number: 4 (lower is better) Translates to: PTMLGCTREVEI*VAAHSEKLNAL Trigger: TAAGGCATTTAGCTTTTCAGAGTGGGCAGCTACCAAGATCTCTACTTCTCTGGTACAACCAAGCATTGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| CDS-3UTR TCA 90 bp | CCATGTTGGGAGTTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTCGTTTATGTCCTGGTTaGAGAGGAATATGCATATTT | + |
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Preference number: 4 (lower is better) Translates to: PCWELLPTLNLCFPLQVTRLCPG*RGICIF Trigger: AAATATGCATATTCCTCTTCAACCAGGACATAAACG...AGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAACTCCCAACATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| CDS-3UTR TCA 90 bp | GGACTGCGTTGTAGCTTCCCATGGGTTTTAATCAACAGACATGGCAATAATAAGAGGTACCAGAAGAGATaGAACCTTTCCCACACTGTT | + |
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Preference number: 4 (lower is better) Translates to: GLRCSFPWVLINRHGNNKRYQKR*NLSHTV Trigger: AACAGTGTGGGAAAGGTTTCATCTCTTCTGGTACCT...CTTATTATTGCCATGTCTGTTGATTAAAACCCATGGGAAGCTACAACGCAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| CDS-3UTR CCA 90 bp | CCATGTTGGGAGTTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTATTGTCTGCCTTCACTaGGTTTATACAATAATTCCA | + |
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Preference number: 4 (lower is better) Translates to: PCWELLPTLNLCFPLQVTIVCLH*VYTIIP Trigger: TGGAATTATTGTATAAACCCAGTGAAGGCAGACAAT...AGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAACTCCCAACATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CAA 72 bp | ATCAACTGGTTCTTTACCCTGAGAAGCCATTCAAACTaGCATTCTGGAGTATCTGAGCCATTTATTACCCTG | + |
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Preference number: 4 (lower is better) Translates to: INWFFTLRSHSN*HSGVSEPFITL Trigger: CAGGGTAATAAATGGCTCAGATACTCCAGAATGCAAGTTTGAATGGCTTCTCAGGGTAAAGAACCAGTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| CDS-3UTR CCA 90 bp | TTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTGCCCTACATATCATATCGTTTATGTCCTaGTTGAAGAGGAATATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLPTLNLCFPLQVTALHIISFMS*LKRNMH Trigger: ATGCATATTCCTCTTCAACCAGGACATAAACGATAT...GATATGTAGGGCAGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| 3UTR CAA 72 bp | GGGGCCCATCTCACAGGTGATTCTAGATTTGTCACATaGGCAATCAACACTATCAAGTATAAAAATAAACAT | + |
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Preference number: 4 (lower is better) Translates to: GAHLTGDSRFVT*AINTIKYKNKH Trigger: ATGTTTATTTTTATACTTGATAGTGTTGATTGCCAATGTGACAAATCTAGAATCACCTGTGAGATGGGCCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| CDS-3UTR CAA 90 bp | CCATGTTGGGAGTTGCTACCCACATTGAATCTGTGTTTTCCCCTCCAAGTCACTCTCACCGGTGTGAATTaGCTCATGTCTCTGACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PCWELLPTLNLCFPLQVTLTGVN*LMSLTV Trigger: GACTGTCAGAGACATGAGCAAATTCACACCGGTGAG...AGTGACTTGGAGGGGAAAACACAGATTCAATGTGGGTAGCAACTCCCAACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| CDS-3UTR CAA 90 bp | CCATTGCTGAATGGCAGTCTCATTCCCCACTGGTCAAGTGGAACTGTCACTCCAGTCTTCGAACCTTACTaGAAGAAGAAAAGGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLLNGSLIPHWSSGTVTPVFEPY*KKKRLS Trigger: GGAAAGCCTTTTCTTCTTCAAGTAAGGTTCGAAGAC...TGGAGTGACAGTTCCACTTGACCAGTGGGGAATGAGACTGCCATTCAGCAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131722.9 |
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| CDS TCA 90 bp | AGACTGTCTTCATATACCTCATATTCATATCGTTTATGTCCTGGTTaGAGAGGAATATGCATATTTAGGGGTGGAAGACCAATAAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: RLSSYTSYSYRLCPG*RGICIFRGGRPISM Trigger: CATACTTATTGGTCTTCCACCCCTAAATATGCATATTCCTCTTCAACCAGGACATAAACGATATGAATATGAGGTATATGAAGACAGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131722.9 ENSMUST00000140829.2 |
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| CDS GCA 72 bp | AGTTCACAGCCACATCCTCGAAAGTTAGACAGTCATTaGCCCGACGTTCGCCTCGTCTGCTCCCGGGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSQPHPRKLDSH*PDVRLVCSRAL Trigger: GAGGGCCCGGGAGCAGACGAGGCGAACGTCGGGGCAATGACTGTCTAACTTTCGAGGATGTGGCTGTGAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153072.8 |
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| CDS CCA 72 bp | TACTCCATGAGAGGTTTTCTTGTTCATAACAGTATCTaGAAACTCACTGAAGATTCCGTCACATTGTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: YSMRGFLVHNSI*KLTEDSVTLSA Trigger: GGCAGACAATGTGACGGAATCTTCAGTGAGTTTCCAGATACTGTTATGAACAAGAAAACCTCTCATGGAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131722.9 ENSMUST00000140829.2 |
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| CDS TCA 72 bp | TCATATACCTCATATTCATATCGTTTATGTCCTGGTTaGAGAGGAATATGCATATTTAGGGGTGGAAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: SYTSYSYRLCPG*RGICIFRGGRP Trigger: TGGTCTTCCACCCCTAAATATGCATATTCCTCTTCAACCAGGACATAAACGATATGAATATGAGGTATATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131722.9 ENSMUST00000140829.2 |
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| CDS CCA 72 bp | TTTCTCCTAGAATCTTCATCAACATCTTTACTCCTCTaGACTTCCTCAATTTGTCCTATAGCAATTAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: FLLESSSTSLLL*TSSICPIAIRF Trigger: AAACCTAATTGCTATAGGACAAATTGAGGAAGTCCAGAGGAGTAAAGATGTTGATGAAGATTCTAGGAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131722.9 ENSMUST00000140829.2 ENSMUST00000153072.8 |
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