Pregenerated sensors for ZFP560 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045519Ensembl transcript IDs: ENSMUST00000068079.14, ENSMUST00000143992.3
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGACCAAGCAGCTCCTTTTATACTGGGCCAAGCCTACATGGTTGTTaGCAGGTAACTGTGGGGAGGAGCATACCTGGCTGCTGCCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: GPSSSFYTGPSLHGC*QVTVGRSIPGCCQE Trigger: TTCCTGGCAGCAGCCAGGTATGCTCCTCCCCACAGTTACCTGGCAACAACCATGTAGGCTTGGCCCAGTATAAAAGGAGCTGCTTGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR CCA 90 bp | AGAGGAGGGACCAAGCAGCTCCTTTTATACTGGGCCAAGCCTACATaGTTGTTGCCAGGTAACTGTGGGGAGGAGCATACCTGGCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: RGGTKQLLLYWAKPT*LLPGNCGEEHTWLL Trigger: CAGCAGCCAGGTATGCTCCTCCCCACAGTTACCTGGCAACAACCATGTAGGCTTGGCCCAGTATAAAAGGAGCTGCTTGGTCCCTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR CCA 90 bp | TGTTGTGATTATAAAAAGAGAAAGAGCTATAGGAGTATGTTCTGGTaGGGTGTGAGGGAAAGGGGTGACACAGGAGGACCATGCAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: CCDYKKRKSYRSMFW*GVRERGDTGGPCRS Trigger: ACTTCTGCATGGTCCTCCTGTGTCACCCCTTTCCCTCACACCCCACCAGAACATACTCCTATAGCTCTTTCTCTTTTTATAATCACAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR CCA 90 bp | GGTTTCCTTTCTTCCAGAAGCTCTAGAGAAGAAAGTCTGCCTACATaGAACCATGTCAGCCGAATGGATGTAACAACAGGATATACTTTA | + |
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Preference number: 1 (lower is better) Translates to: GFLSSRSSREESLPT*NHVSRMDVTTGYTL Trigger: TAAAGTATATCCTGTTGTTACATCCATTCGGCTGACATGGTTCCATGTAGGCAGACTTTCTTCTCTAGAGCTTCTGGAAGAAAGGAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143992.3 |
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| 3UTR GCA 90 bp | CATTCTGATCACTTCCTCCGTTCTTTAATCCTCATGAGGCAACTTTaGAACATGATTTCTTTTATGTCTTTGAAGTCAACTAGTGTTGTG | + |
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Preference number: 1 (lower is better) Translates to: HSDHFLRSLILMRQL*NMISFMSLKSTSVV Trigger: CACAACACTAGTTGACTTCAAAGACATAAAAGAAATCATGTTGCAAAGTTGCCTCATGAGGATTAAAGAACGGAGGAAGTGATCAGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR CAA 90 bp | GGGACCAAGCAGCTCCTTTTATACTGGGCCAAGCCTACATGGTTGTaGCCAGGTAACTGTGGGGAGGAGCATACCTGGCTGCTGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GTKQLLLYWAKPTWL*PGNCGEEHTWLLPG Trigger: TCCTGGCAGCAGCCAGGTATGCTCCTCCCCACAGTTACCTGGCAACAACCATGTAGGCTTGGCCCAGTATAAAAGGAGCTGCTTGGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR CAA 90 bp | GGAGGGACCAAGCAGCTCCTTTTATACTGGGCCAAGCCTACATGGTaGTTGCCAGGTAACTGTGGGGAGGAGCATACCTGGCTGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: GGTKQLLLYWAKPTW*LPGNCGEEHTWLLP Trigger: TGGCAGCAGCCAGGTATGCTCCTCCCCACAGTTACCTGGCAACAACCATGTAGGCTTGGCCCAGTATAAAAGGAGCTGCTTGGTCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR GCA 90 bp | AAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGCAGCATACCTGGCTGCTaGCAGGAACTGTGGGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: KPKSLSCRGHIHTHRDACSIPGC*QELWGC Trigger: ACACCCCCACAGTTCCTGGCAGCAGCCAGGTATGCT...GCATGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR GCA 90 bp | AAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGCGACACAGGAGGACCATaGAGAAGTATCCCTTCACCC | + |
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Preference number: 2 (lower is better) Translates to: KPKSLSCRGHIHTHRDACDTGGP*RSIPSP Trigger: GGGTGAAGGGATACTTCTGCATGGTCCTCCTGTGTC...GCATGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR TCA 90 bp | ATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCAGGCAGAGAGAAGGAGTaGGTAGAGATGTCGAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: IKPKSLSCRGHIHTHRDAGREKE*VEMSSP Trigger: TGGACTCGACATCTCTACTCACTCCTTCTCTCTGCC...TGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR CCA 90 bp | AAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGCTATAGGAGTATGTTCTaGTGGGGTGTGAGGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: KPKSLSCRGHIHTHRDACYRSMF*WGVRER Trigger: CCTTTCCCTCACACCCCACCAGAACATACTCCTATA...GCATGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR TCA 90 bp | AAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATGGCAGAGGACCTCTGTaGGTTCAAAGCCAAGCTAGT | + |
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Preference number: 2 (lower is better) Translates to: KWKARIKPKSLSCRGHIHGRGPL*VQSQAS Trigger: ACTAGCTTGGCTTTGAACTCACAGAGGTCCTCTGCC...ATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR CCA 90 bp | ATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGGGCCAAGCCTACATaGTTGTTGCCAGGTAACTGT | + |
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Preference number: 2 (lower is better) Translates to: IKPKSLSCRGHIHTHRDAWAKPT*LLPGNC Trigger: ACAGTTACCTGGCAACAACCATGTAGGCTTGGCCCA...TGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR GCA 90 bp | CCGTTCTTTAATCCTCATGAGGCAACTTTGCAACATGATTTCTTTTATGTCTTTAGGAGCATACCTGGCTaGTGCCAGGAACTGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: PFFNPHEATLQHDFFYVFRSIPG*CQELWG Trigger: CCCCCACAGTTCCTGGCAGCAGCCAGGTATGCTCCT...AAAGACATAAAAGAAATCATGTTGCAAAGTTGCCTCATGAGGATTAAAGAACGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR CCA 90 bp | AAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATTTTAATCCCAGCACTTaGGAGGCAGAGGACCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: KWKARIKPKSLSCRGHIHFNPST*EAEDLC Trigger: ACAGAGGTCCTCTGCCTCCCAAGTGCTGGGATTAAA...ATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR TCA 90 bp | ATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATCCAGAGCTAAACAGTaGGAGCCTGTCTTTAACAAG | + |
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Preference number: 2 (lower is better) Translates to: IKPKSLSCRGHIHTHRDASRAKQ*EPVFNK Trigger: CTTGTTAAAGACAGGCTCTCACTGTTTAGCTCTGGA...TGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR TCA 90 bp | ATTGACTCTGTCTACAAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTTGTGAAGCTTCAAAGTaGGTTTGTGTGAGCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: IDSVYKWKARIKPKSLSCCEASK*VCVSWV Trigger: AACCCAGCTCACACAAACTCACTTTGAAGCTTCACA...ACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTTGTAGACAGAGTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR CCA 90 bp | CCGTTCTTTAATCCTCATGAGGCAACTTTGCAACATGATTTCTTTTATGTCTTTTGCTGCCAGGAACTGTaGGGGTGTAGTTTAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: PFFNPHEATLQHDFFYVFCCQEL*GCSLDR Trigger: TCTGTCTAAACTACACCCCCACAGTTCCTGGCAGCA...AAAGACATAAAAGAAATCATGTTGCAAAGTTGCCTCATGAGGATTAAAGAACGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR CCA 90 bp | CCGTTCTTTAATCCTCATGAGGCAACTTTGCAACATGATTTCTTTTATGTCTTTCAGCTCCTTTTATACTaGGCCAAGCCTACATGGTTG | + |
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Preference number: 2 (lower is better) Translates to: PFFNPHEATLQHDFFYVFQLLLY*AKPTWL Trigger: CAACCATGTAGGCTTGGCCCAGTATAAAAGGAGCTG...AAAGACATAAAAGAAATCATGTTGCAAAGTTGCCTCATGAGGATTAAAGAACGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR GCA 90 bp | AAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATCTCATGAGGCAACTTTaGAACATGATTTCTTTTATG | + |
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Preference number: 2 (lower is better) Translates to: KWKARIKPKSLSCRGHIHLMRQL*NMISFM Trigger: CATAAAAGAAATCATGTTGCAAAGTTGCCTCATGAG...ATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR GCA 90 bp | CTTACAAATAGTCAGGAAGAAATACAACTAATCACTCAGTCCTTGAATGAGGTTCTAGAGAAGAAAGTCTaGCTACATGGAACCATGTCA | + |
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Preference number: 2 (lower is better) Translates to: LTNSQEEIQLITQSLNEVLEKKV*LHGTMS Trigger: TGACATGGTTCCATGTAGGCAGACTTTCTTCTCTAG...AACCTCATTCAAGGACTGAGTGATTAGTTGTATTTCTTCCTGACTATTTGTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143992.3 |
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| 3UTR GCA 72 bp | TGTTGCCAGGTAACTGTGGGGAGGAGCATACCTGGCTaGTGCCAGGAACTGTGGGGGTGTAGTTTAGACAGA | + |
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Preference number: 3 (lower is better) Translates to: CCQVTVGRSIPG*CQELWGCSLDR Trigger: TCTGTCTAAACTACACCCCCACAGTTCCTGGCAGCAGCCAGGTATGCTCCTCCCCACAGTTACCTGGCAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR GCA 72 bp | TGCCAGGTAACTGTGGGGAGGAGCATACCTGGCTGCTaGCAGGAACTGTGGGGGTGTAGTTTAGACAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: CQVTVGRSIPGC*QELWGCSLDRK Trigger: TTTTCTGTCTAAACTACACCCCCACAGTTCCTGGCAGCAGCCAGGTATGCTCCTCCCCACAGTTACCTGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR GCA 72 bp | AGCTCCTTTTATACTGGGCCAAGCCTACATGGTTGTTaGCAGGTAACTGTGGGGAGGAGCATACCTGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: SSFYTGPSLHGC*QVTVGRSIPGC Trigger: GCAGCCAGGTATGCTCCTCCCCACAGTTACCTGGCAACAACCATGTAGGCTTGGCCCAGTATAAAAGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR CCA 72 bp | ACCAAGCAGCTCCTTTTATACTGGGCCAAGCCTACATaGTTGTTGCCAGGTAACTGTGGGGAGGAGCATACC | + |
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Preference number: 3 (lower is better) Translates to: TKQLLLYWAKPT*LLPGNCGEEHT Trigger: GGTATGCTCCTCCCCACAGTTACCTGGCAACAACCATGTAGGCTTGGCCCAGTATAAAAGGAGCTGCTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR CCA 72 bp | AGAGAGAGAGGAGGGACCAAGCAGCTCCTTTTATACTaGGCCAAGCCTACATGGTTGTTGCCAGGTAACTGT | + |
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Preference number: 3 (lower is better) Translates to: RERGGTKQLLLY*AKPTWLLPGNC Trigger: ACAGTTACCTGGCAACAACCATGTAGGCTTGGCCCAGTATAAAAGGAGCTGCTTGGTCCCTCCTCTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR CCA 72 bp | TTGGGCATGGCAGTGTATGCATTTAATCCCAGCACTTaGGAGGCAGAGGACCTCTGTGAGTTCAAAGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: LGMAVYAFNPST*EAEDLCEFKAK Trigger: CTTGGCTTTGAACTCACAGAGGTCCTCTGCCTCCCAAGTGCTGGGATTAAATGCATACACTGCCATGCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR CAA 90 bp | ATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCAGCCAAGCCTACATGGTaGTTGCCAGGTAACTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: IKPKSLSCRGHIHTHRDAAKPTW*LPGNCG Trigger: CCCACAGTTACCTGGCAACAACCATGTAGGCTTGGC...TGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR CAA 90 bp | ATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGTGTGAGCTGGGTTTaGAGCATTCTGATCACTTCC | + |
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Preference number: 3 (lower is better) Translates to: IKPKSLSCRGHIHTHRDACVSWV*SILITS Trigger: GGAAGTGATCAGAATGCTCAAAACCCAGCTCACACA...TGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR CAA 90 bp | CCGTTCTTTAATCCTCATGAGGCAACTTTGCAACATGATTTCTTTTATGTCTTTAAGCCTACATGGTTGTaGCCAGGTAACTGTGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: PFFNPHEATLQHDFFYVFKPTWL*PGNCGE Trigger: CTCCCCACAGTTACCTGGCAACAACCATGTAGGCTT...AAAGACATAAAAGAAATCATGTTGCAAAGTTGCCTCATGAGGATTAAAGAACGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR-3UTR CAA 90 bp | ATTGACTCTGTCTACAAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTAGCTTCAAAGTGAGTTaGTGTGAGCTGGGTTTTGAG | + |
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Preference number: 3 (lower is better) Translates to: IDSVYKWKARIKPKSLSCSFKVS*CELGFE Trigger: CTCAAAACCCAGCTCACACAAACTCACTTTGAAGCT...ACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTTGTAGACAGAGTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR TCA 72 bp | AAGCTAGTTTACACAGTGAGTTCCAGAGCTAAACAGTaGGAGCCTGTCTTTAACAAGTTAATGTTTATGAGT | + |
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Preference number: 3 (lower is better) Translates to: KLVYTVSSRAKQ*EPVFNKLMFMS Trigger: ACTCATAAACATTAACTTGTTAAAGACAGGCTCTCACTGTTTAGCTCTGGAACTCACTGTGTAAACTAGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR GCA 72 bp | CACTTCCTCCGTTCTTTAATCCTCATGAGGCAACTTTaGAACATGATTTCTTTTATGTCTTTGAAGTCAACT | + |
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Preference number: 3 (lower is better) Translates to: HFLRSLILMRQL*NMISFMSLKST Trigger: AGTTGACTTCAAAGACATAAAAGAAATCATGTTGCAAAGTTGCCTCATGAGGATTAAAGAACGGAGGAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR CCA 72 bp | TTTCTTACGTTCACAAAGTCCTCCACTGTTGTACTGTaGGTAATCATCAAAGAACTGAGCAAAATACAATTT | + |
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Preference number: 3 (lower is better) Translates to: FLTFTKSSTVVL*VIIKELSKIQF Trigger: AAATTGTATTTTGCTCAGTTCTTTGATGATTACCCACAGTACAACAGTGGAGGACTTTGTGAACGTAAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR TCA 72 bp | CATCCTTTCATGATACTCTCAAGTTGGATACAGAAATaGTTGCACCTTAATTTGCTAGTGACTGTATACATA | + |
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Preference number: 3 (lower is better) Translates to: HPFMILSSWIQK*LHLNLLVTVYI Trigger: TATGTATACAGTCACTAGCAAATTAAGGTGCAATCATTTCTGTATCCAACTTGAGAGTATCATGAAAGGATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR CAA 72 bp | CAGCTCCTTTTATACTGGGCCAAGCCTACATGGTTGTaGCCAGGTAACTGTGGGGAGGAGCATACCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QLLLYWAKPTWL*PGNCGEEHTWL Trigger: CAGCCAGGTATGCTCCTCCCCACAGTTACCTGGCAACAACCATGTAGGCTTGGCCCAGTATAAAAGGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR TCA 90 bp | AAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGCGGCTTGTGCGCTCAGTaGAGGCTCTGCCACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: KPKSLSCRGHIHTHRDACGLCAQ*RLCHTP Trigger: AGGAGTGTGGCAGAGCCTTCACTGAGCGCACAAGCC...GCATGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| 3UTR CAA 72 bp | AAGCAGCTCCTTTTATACTGGGCCAAGCCTACATGGTaGTTGCCAGGTAACTGTGGGGAGGAGCATACCTGG | + |
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Preference number: 4 (lower is better) Translates to: KQLLLYWAKPTW*LPGNCGEEHTW Trigger: CCAGGTATGCTCCTCCCCACAGTTACCTGGCAACAACCATGTAGGCTTGGCCCAGTATAAAAGGAGCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR TCA 90 bp | AAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATGGCCAGAGCGCACAGTaGATGCTTTCCCACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: KWKARIKPKSLSCRGHIHGQSAQ*MLSHTP Trigger: AGGAGTGTGGGAAAGCATTCACTGTGCGCTCTGGCC...ATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR GCA 90 bp | AAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATTCCAGGACCAGTGTCTaGAGAGGAAGTCTCCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: KWKARIKPKSLSCRGHIHSRTSV*RGSLLR Trigger: CCTAAGGAGACTTCCTCTGCAGACACTGGTCCTGGA...ATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR GCA 90 bp | AAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGCAAAGTATCACCACACTaGACCGACTCAGAGAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: KPKSLSCRGHIHTHRDACKVSPH*TDSESL Trigger: CAAACTCTCTGAGTCGGTGCAGTGTGGTGATACTTT...GCATGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR CCA 90 bp | AAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGCGATGATTTCTCCAGGTaGCTTAATGTCACAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: KPKSLSCRGHIHTHRDACDDFSR*LNVTEL Trigger: GAGCTCTGTGACATTAAGCCACCTGGAGAAATCATC...GCATGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR TCA 90 bp | AAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGCGGTTTTATTCCAGTGTaGACCCGAAAGTGGTCATTA | + |
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Preference number: 4 (lower is better) Translates to: KPKSLSCRGHIHTHRDACGFIPV*TRKWSL Trigger: TAATGACCACTTTCGGGTTCACACTGGAATAAAACC...GCATGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR GCA 90 bp | AAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGCAGAAGAACATGTGAATaGCTTCCCACAGACTTGACA | + |
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Preference number: 4 (lower is better) Translates to: KPKSLSCRGHIHTHRDACRRTCE*LPTDLT Trigger: TGTCAAGTCTGTGGGAAGGCATTCACATGTTCTTCT...GCATGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR CCA 90 bp | AAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGCGTATGTCAGACTGCATaGAGGCTCTTTGATGATTTC | + |
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Preference number: 4 (lower is better) Translates to: KPKSLSCRGHIHTHRDACVCQTA*RLFDDF Trigger: GAAATCATCAAAGAGCCTCCATGCAGTCTGACATAC...GCATGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR TCA 90 bp | ATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCACTAGATTTGATGAGCTaGCATCCTAATGTAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: IKPKSLSCRGHIHTHRDALDLMS*HPNVAR Trigger: CCTGGCTACATTAGGATGTCAGCTCATCAAATCTAG...TGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR TCA 90 bp | ATTGACTCTGTCTACAAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTATGCTCAAGGAGGCCTaGGGATGTAGTGAACGCTTT | + |
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Preference number: 4 (lower is better) Translates to: IDSVYKWKARIKPKSLSCMLKEA*GCSERF Trigger: AAAGCGTTCACTACATCCTCAGGCCTCCTTGAGCAT...ACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTTGTAGACAGAGTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR TCA 90 bp | AAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATATCCTCAAAGGTCACTaGCTCCTGGTAACTACTTGT | + |
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Preference number: 4 (lower is better) Translates to: KWKARIKPKSLSCRGHIHILKGH*LLVTTC Trigger: ACAAGTAGTTACCAGGAGTCAGTGACCTTTGAGGAT...ATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR GCA 90 bp | AAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGCCTGGTAAGCTGTACTTaGAATCATACTGAAGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: KPKSLSCRGHIHTHRDACLVSCT*NHTEVF Trigger: AAAGACTTCAGTATGATTGCAAGTACAGCTTACCAG...GCATGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR TCA 90 bp | AAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATGGTGAACTCTTTTCTTaGCTACTCTCAACTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: KWKARIKPKSLSCRGHIHGELFS*LLSTLQ Trigger: CTGAAGAGTTGAGAGTAGTCAAGAAAAGAGTTCACC...ATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR TCA 90 bp | AAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATATGTGTAATAAGGGTTaGGGAAGAAGCAAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KWKARIKPKSLSCRGHIHMCNKG*GRSKGL Trigger: AAGGCCTTTGCTTCTTCCTCAACCCTTATTACACAT...ATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR CCA 90 bp | AAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATAGCTCCTTTCCATTGTaGCTATTTGGCAGTTGTATC | + |
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Preference number: 4 (lower is better) Translates to: KWKARIKPKSLSCRGHIHSSFPL*LFGSCI Trigger: GATACAACTGCCAAATAGCCACAATGGAAAGGAGCT...ATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR TCA 90 bp | ATTGACTCTGTCTACAAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTATAGCCCAGTCTTGGTaGACTCTTTTCTTGACTACT | + |
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Preference number: 4 (lower is better) Translates to: IDSVYKWKARIKPKSLSCIAQSW*TLFLTT Trigger: AGTAGTCAAGAAAAGAGTTCACCAAGACTGGGCTAT...ACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTTGTAGACAGAGTCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR TCA 90 bp | AAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATTACTTGCAATCATACTaGAGTCTTTTCCATACTGGC | + |
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Preference number: 4 (lower is better) Translates to: KWKARIKPKSLSCRGHIHYLQSY*SLFHTG Trigger: GCCAGTATGGAAAAGACTTCAGTATGATTGCAAGTA...ATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR TCA 90 bp | ATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCACTATCAAAGACTTGCTaGAATTCACTGGATTCAATG | + |
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Preference number: 4 (lower is better) Translates to: IKPKSLSCRGHIHTHRDALSKTC*NSLDSM Trigger: CATTGAATCCAGTGAATTTCAGCAAGTCTTTGATAG...TGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR GCA 90 bp | CCGTTCTTTAATCCTCATGAGGCAACTTTGCAACATGATTTCTTTTATGTCTTTAAGGTAGGAGGAACATaGAAACGCTTTTCCACACAT | + |
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Preference number: 4 (lower is better) Translates to: PFFNPHEATLQHDFFYVFKVGGT*KRFSTH Trigger: ATGTGTGGAAAAGCGTTTGCATGTTCCTCCTACCTT...AAAGACATAAAAGAAATCATGTTGCAAAGTTGCCTCATGAGGATTAAAGAACGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR TCA 90 bp | CCGTTCTTTAATCCTCATGAGGCAACTTTGCAACATGATTTCTTTTATGTCTTTGGTCTCTCTCCCATGTaGCTTTTCATATGTTTAATA | + |
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Preference number: 4 (lower is better) Translates to: PFFNPHEATLQHDFFYVFGLSPM*LFICLI Trigger: TATTAAACATATGAAAAGTCACATGGGAGAGAGACC...AAAGACATAAAAGAAATCATGTTGCAAAGTTGCCTCATGAGGATTAAAGAACGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR GCA 90 bp | CCGTTCTTTAATCCTCATGAGGCAACTTTGCAACATGATTTCTTTTATGTCTTTACTGATAAGCTTTCTTaGCATTGTGAATTTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: PFFNPHEATLQHDFFYVFTDKLS*HCEFGC Trigger: GCATCCAAATTCACAATGGCAAGAAAGCTTATCAGT...AAAGACATAAAAGAAATCATGTTGCAAAGTTGCCTCATGAGGATTAAAGAACGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR CAA 90 bp | AAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGCACTCCTGGTAACTACTaGTCCAGCAGTCAGACACCG | + |
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Preference number: 5 (lower is better) Translates to: KPKSLSCRGHIHTHRDACTPGNY*SSSQTP Trigger: CGGTGTCTGACTGCTGGACAAGTAGTTACCAGGAGT...GCATGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR CAA 90 bp | AAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGCCAGAGCTCCTTTCCATaGTGGCTATTTGGCAGTTGT | + |
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Preference number: 5 (lower is better) Translates to: KPKSLSCRGHIHTHRDACQSSFP*WLFGSC Trigger: ACAACTGCCAAATAGCCACAATGGAAAGGAGCTCTG...GCATGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS CCA 90 bp | TATGTATGTCAGACTGCATGGAGGCTCTTTGATGATTTCTCCAGGTaGCTTAATGTCACAGAGCTCCTTTCCATTGTGGCTATTTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: YVCQTAWRLFDDFSR*LNVTELLSIVAIWQ Trigger: CTGCCAAATAGCCACAATGGAAAGGAGCTCTGTGACATTAAGCCACCTGGAGAAATCATCAAAGAGCCTCCATGCAGTCTGACATACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR CAA 90 bp | ATTGACTCTGTCTACAAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTCCCTCTGGGGTTAAGTaGTATAGCCCAGTCTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: IDSVYKWKARIKPKSLSCPSGVK*YSPVLV Trigger: CACCAAGACTGGGCTATACAACTTAACCCCAGAGGG...ACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTTGTAGACAGAGTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS TCA 90 bp | TGCTTTGTACACATGTTGTCTGGTAAGCTGTACTTGCAATCATACTaGAGTCTTTTCCATACTGGCGTAATCCAGGACCAGTGTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: CFVHMLSGKLYLQSY*SLFHTGVIQDQCLQ Trigger: CTGCAGACACTGGTCCTGGATTACGCCAGTATGGAAAAGACTTCAGTATGATTGCAAGTACAGCTTACCAGACAACATGTGTACAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR CAA 90 bp | ATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATTGTATAGCCCAGTCTaGGTGAACTCTTTTCTTGAC | + |
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Preference number: 5 (lower is better) Translates to: IKPKSLSCRGHIHTHRDALYSPV*VNSFLD Trigger: GTCAAGAAAAGAGTTCACCAAGACTGGGCTATACAA...TGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR CAA 90 bp | ATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGCTTTGTACACATGTaGTCTGGTAAGCTGTACTTG | + |
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Preference number: 5 (lower is better) Translates to: IKPKSLSCRGHIHTHRDACFVHM*SGKLYL Trigger: CAAGTACAGCTTACCAGACAACATGTGTACAAAGCA...TGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR CAA 90 bp | AAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATGCCTGGATTCAATGAATTaGCTTTGTACACATGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: KPKSLSCRGHIHTHRDACLDSMN*LCTHVV Trigger: GACAACATGTGTACAAAGCAAATTCATTGAATCCAG...GCATGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR CAA 90 bp | GAAGAAATACAACTAATCACTCAGTCCTTGAATGAGGTTTCCTTTCTTCCAGAAACACCTGGTAACTACTaGTCCAGCAGTCAGACACCG | + |
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Preference number: 5 (lower is better) Translates to: EEIQLITQSLNEVSFLPETPGNY*SSSQTP Trigger: CGGTGTCTGACTGCTGGACAAGTAGTTACCAGGTGT...TTCTGGAAGAAAGGAAACCTCATTCAAGGACTGAGTGATTAGTTGTATTTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143992.3 |
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| CDS-3UTR CAA 90 bp | ATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATACACACAGAGACGCATTCCATTGTGGCTATTaGGCAGTTGTATCTCATTTG | + |
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Preference number: 5 (lower is better) Translates to: IKPKSLSCRGHIHTHRDAFHCGY*AVVSHL Trigger: CAAATGAGATACAACTGCCAAATAGCCACAATGGAA...TGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS CCA 90 bp | ATAAATGTTCCCTGTGTTTTCAATACCTATGTATGTCAGACTGCATaGAGGCTCTTTGATGATTTCTCCAGGTGGCTTAATGTCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: INVPCVFNTYVCQTA*RLFDDFSRWLNVTE Trigger: CTCTGTGACATTAAGCCACCTGGAGAAATCATCAAAGAGCCTCCATGCAGTCTGACATACATAGGTATTGAAAACACAGGGAACATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS-3UTR CAA 90 bp | AAGTGGAAAGCTAGGATAAAACCCAAGTCTCTTAGCTGTAGAGGCCACATTCATGCTTTTCCACACATATaGCACTCAAAGGGATTTTCT | + |
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Preference number: 5 (lower is better) Translates to: KWKARIKPKSLSCRGHIHAFPHI*HSKGFS Trigger: AGAAAATCCCTTTGAGTGCAATATGTGTGGAAAAGC...ATGAATGTGGCCTCTACAGCTAAGAGACTTGGGTTTTATCCTAGCTTTCCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS TCA 90 bp | GGGATGACTGACTATCAAAGACTTGCTGAAATTCACTGGATTCAATaGATTTGCTTTGTACACATGTTGTCTGGTAAGCTGTACTTGCAA | + |
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Preference number: 5 (lower is better) Translates to: GMTDYQRLAEIHWIQ*ICFVHMLSGKLYLQ Trigger: TTGCAAGTACAGCTTACCAGACAACATGTGTACAAAGCAAATTCATTGAATCCAGTGAATTTCAGCAAGTCTTTGATAGTCAGTCATCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS TCA 72 bp | GTCTTCACTGTGACTTCCCCCAGGCCTCTGAAGGGATaGCTGACTATCAAAGACTTGCTGAAATTCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: VFTVTSPRPLKG*LTIKDLLKFTG Trigger: TCCAGTGAATTTCAGCAAGTCTTTGATAGTCAGTCATCCCTTCAGAGGCCTGGGGGAAGTCACAGTGAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS CCA 72 bp | CAGACTGCATGGAGGCTCTTTGATGATTTCTCCAGGTaGCTTAATGTCACAGAGCTCCTTTCCATTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: QTAWRLFDDFSR*LNVTELLSIVA Trigger: AGCCACAATGGAAAGGAGCTCTGTGACATTAAGCCACCTGGAGAAATCATCAAAGAGCCTCCATGCAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS CAA 90 bp | CCGCTGAAACATTGTCCCTCTGGGGTTAAGTTGTATAGCCCAGTCTaGGTGAACTCTTTTCTTGACTACTCTCAACTCTTCAGCCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: PLKHCPSGVKLYSPV*VNSFLDYSQLFSLQ Trigger: TTGGAGGCTGAAGAGTTGAGAGTAGTCAAGAAAAGAGTTCACCAAGACTGGGCTATACAACTTAACCCCAGAGGGACAATGTTTCAGCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS CCA 72 bp | GCTGTACTTGCAATCATACTGAAGTCTTTTCCATACTaGCGTAATCCAGGACCAGTGTCTGCAGAGGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: AVLAIILKSFPY*RNPGPVSAEEV Trigger: GACTTCCTCTGCAGACACTGGTCCTGGATTACGCCAGTATGGAAAAGACTTCAGTATGATTGCAAGTACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS CAA 90 bp | CCTGTGTTTTCAATACCTATGTATGTCAGACTGCATGGAGGCTCTTaGATGATTTCTCCAGGTGGCTTAATGTCACAGAGCTCCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PVFSIPMYVRLHGGS*MISPGGLMSQSSFP Trigger: TGGAAAGGAGCTCTGTGACATTAAGCCACCTGGAGAAATCATCAAAGAGCCTCCATGCAGTCTGACATACATAGGTATTGAAAACACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS TCA 72 bp | CACATGTTGTCTGGTAAGCTGTACTTGCAATCATACTaGAGTCTTTTCCATACTGGCGTAATCCAGGACCAG | + |
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Preference number: 6 (lower is better) Translates to: HMLSGKLYLQSY*SLFHTGVIQDQ Trigger: CTGGTCCTGGATTACGCCAGTATGGAAAAGACTTCAGTATGATTGCAAGTACAGCTTACCAGACAACATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS CAA 72 bp | AATATCCCGCTGAAACATTGTCCCTCTGGGGTTAAGTaGTATAGCCCAGTCTTGGTGAACTCTTTTCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: NIPLKHCPSGVK*YSPVLVNSFLD Trigger: GTCAAGAAAAGAGTTCACCAAGACTGGGCTATACAACTTAACCCCAGAGGGACAATGTTTCAGCGGGATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS CAA 72 bp | TCAATACCTATGTATGTCAGACTGCATGGAGGCTCTTaGATGATTTCTCCAGGTGGCTTAATGTCACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: SIPMYVRLHGGS*MISPGGLMSQS Trigger: GCTCTGTGACATTAAGCCACCTGGAGAAATCATCAAAGAGCCTCCATGCAGTCTGACATACATAGGTATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS CCA 72 bp | CCCTGTGTTTTCAATACCTATGTATGTCAGACTGCATaGAGGCTCTTTGATGATTTCTCCAGGTGGCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: PCVFNTYVCQTA*RLFDDFSRWLN Trigger: ATTAAGCCACCTGGAGAAATCATCAAAGAGCCTCCATGCAGTCTGACATACATAGGTATTGAAAACACAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS CAA 90 bp | CACAGAGCTCCTTTCCATTGTGGCTATTTGGCAGTTGTATCTCATTaGACATTTTTAACTGAAAAATATCCCGCTGAAACATTGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: HRAPFHCGYLAVVSH*TFLTEKYPAETLSL Trigger: GAGGGACAATGTTTCAGCGGGATATTTTTCAGTTAAAAATGTCAAATGAGATACAACTGCCAAATAGCCACAATGGAAAGGAGCTCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS TCA 72 bp | CAAGACTTTTCAAGTGTTCTGTACGATGAGAACGACTaGAGGCTATTCCATCACTTTTACAAGTGTAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: QDFSSVLYDEND*RLFHHFYKCRL Trigger: AAGCCTACACTTGTAAAAGTGATGGAATAGCCTTCAGTCGTTCTCATCGTACAGAACACTTGAAAAGTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS TCA 72 bp | GACTATCAAAGACTTGCTGAAATTCACTGGATTCAATaGATTTGCTTTGTACACATGTTGTCTGGTAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: DYQRLAEIHWIQ*ICFVHMLSGKL Trigger: CAGCTTACCAGACAACATGTGTACAAAGCAAATTCATTGAATCCAGTGAATTTCAGCAAGTCTTTGATAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS CAA 90 bp | ACTATCAAAGACTTGCTGAAATTCACTGGATTCAATGAATTTGCTTaGTACACATGTTGTCTGGTAAGCTGTACTTGCAATCATACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TIKDLLKFTGFNEFA*YTCCLVSCTCNHTE Trigger: TTCAGTATGATTGCAAGTACAGCTTACCAGACAACATGTGTACAAAGCAAATTCATTGAATCCAGTGAATTTCAGCAAGTCTTTGATAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS TCA 72 bp | GAATTTATCTCAAGACTTTTCAAGTGTTCTGTACGATaGGAACGACTGAAGGCTATTCCATCACTTTTACAA | + |
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Preference number: 6 (lower is better) Translates to: EFISRLFKCSVR*ERLKAIPSLLQ Trigger: TTGTAAAAGTGATGGAATAGCCTTCAGTCGTTCTCATCGTACAGAACACTTGAAAAGTCTTGAGATAAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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| CDS GCA 72 bp | TACACTGATAAGCTTTCTTGCCATTGTGAATTTGGATaGACCGTTAAAGCAATAGAACTTTCTAAAGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: YTDKLSCHCEFG*TVKAIELSKAV Trigger: AACTGCTTTAGAAAGTTCTATTGCTTTAACGGTGCATCCAAATTCACAATGGCAAGAAAGCTTATCAGTGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068079.14 |
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