Pregenerated sensors for ZFP551 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034071Ensembl transcript IDs: ENSMUST00000080348.12, ENSMUST00000120220.3, ENSMUST00000123877.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGTGCCAAGCCTCTTCCAAAGCTGGGACAGGTATCTCAAGGAGATaGGTCTCCTGGGGAGATGGACTTGTGTTACACACCACCTCTTCT | + |
|
Preference number: 1 (lower is better) Translates to: WCQASSKAGTGISRR*VSWGDGLVLHTTSS Trigger: AGAAGAGGTGGTGTGTAACACAAGTCCATCTCCCCAGGAGACTCATCTCCTTGAGATACCTGTCCCAGCTTTGGAAGAGGCTTGGCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR GCA 90 bp | CTGTCTTCCTTCAAACCGGAACCTGTTCTGCTCAAATCTAATGTCTaGACAGGCTGTGTGCTCAAGAACTCATTCTGGTGCCAAGCCTCT | + |
|
Preference number: 1 (lower is better) Translates to: LSSFKPEPVLLKSNV*TGCVLKNSFWCQAS Trigger: AGAGGCTTGGCACCAGAATGAGTTCTTGAGCACACAGCCTGTGCAGACATTAGATTTGAGCAGAACAGGTTCCGGTTTGAAGGAAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR CCA 90 bp | CTCAAATCTAATGTCTGCACAGGCTGTGTGCTCAAGAACTCATTCTaGTGCCAAGCCTCTTCCAAAGCTGGGACAGGTATCTCAAGGAGA | + |
|
Preference number: 1 (lower is better) Translates to: LKSNVCTGCVLKNSF*CQASSKAGTGISRR Trigger: TCTCCTTGAGATACCTGTCCCAGCTTTGGAAGAGGCTTGGCACCAGAATGAGTTCTTGAGCACACAGCCTGTGCAGACATTAGATTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR GCA 90 bp | CACCTTCGTCCAATCAGGGGCAGGCATAAATCTTTATGCACTTTCTaGCTACGTCCTTCTCACCTAGATGTGATAAAGAACACGCTAGGC | + |
|
Preference number: 1 (lower is better) Translates to: HLRPIRGRHKSLCTF*LRPSHLDVIKNTLG Trigger: GCCTAGCGTGTTCTTTATCACATCTAGGTGAGAAGGACGTAGGCAGAAAGTGCATAAAGATTTATGCCTGCCCCTGATTGGACGAAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080348.12 ENSMUST00000120220.3 |
||
| 3UTR GCA 90 bp | TCTTCCAATGCCGGTTACTGTCTTCCTTCAAACCGGAACCTGTTCTaGTCAAATCTAATGTCTGCACAGGCTGTGTGCTCAAGAACTCAT | + |
|
Preference number: 1 (lower is better) Translates to: SSNAGYCLPSNRNLF*SNLMSAQAVCSRTH Trigger: ATGAGTTCTTGAGCACACAGCCTGTGCAGACATTAGATTTGAGCAGAACAGGTTCCGGTTTGAAGGAAGACAGTAACCGGCATTGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR GCA 90 bp | GCCTTTTCTCAGAGGAGGCACTTGGACACTGAACAAGTGTGTGTTTaGAGCTTGAACCTTTTTGGCATTCACCGTCCTTACAATGTTTCT | + |
|
Preference number: 1 (lower is better) Translates to: AFSQRRHLDTEQVCV*SLNLFGIHRPYNVS Trigger: AGAAACATTGTAAGGACGGTGAATGCCAAAAAGGTTCAAGCTGCAAACACACACTTGTTCAGTGTCCAAGTGCCTCCTCTGAGAAAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR-3UTR TCA 90 bp | GATGAGTCTCCTGGGGAGATGGACTTGTGTTACACACCACCTCTTCTGCAGGCTGGTATCTCAAGGAGATaGGTCTCCTGGGGAGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: DESPGEMDLCYTPPLLQAGISRR*VSWGDG Trigger: TCCATCTCCCCAGGAGACTCATCTCCTTGAGATACC...AGCCTGCAGAAGAGGTGGTGTGTAACACAAGTCCATCTCCCCAGGAGACTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120220.3 ENSMUST00000123877.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGTCTCCTGGGGAGATGGACTTGTGTTACACACCACCTCTTCTGCAGGCTCACAGTCTCCTGGGGAGATaGACTTGTGTTACACACCAC | + |
|
Preference number: 2 (lower is better) Translates to: ESPGEMDLCYTPPLLQAHSLLGR*TCVTHH Trigger: GTGGTGTGTAACACAAGTCCATCTCCCCAGGAGACT...GTGAGCCTGCAGAAGAGGTGGTGTGTAACACAAGTCCATCTCCCCAGGAGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120220.3 ENSMUST00000123877.2 |
||
| 3UTR CAA 90 bp | CTTGGCACTGCTATAAGGCTGTTCACGAATACAAGTGGCTTGCTGTaGAAGACAGCCTGTGGAGGGCTGTTCACTATGACACGCACCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LGTAIRLFTNTSGLL*KTACGGLFTMTRTL Trigger: CAGGGTGCGTGTCATAGTGAACAGCCCTCCACAGGCTGTCTTCAACAGCAAGCCACTTGTATTCGTGAACAGCCTTATAGCAGTGCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCAAGGAGATGAGTCTCCTGGGGAGATGGACTTGTGTTACACACCACCTCTTCGGTATCTCAAGGAGATaGGTCTCCTGGGGAGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: LKEMSLLGRWTCVTHHLFGISRR*VSWGDG Trigger: TCCATCTCCCCAGGAGACTCATCTCCTTGAGATACC...GAAGAGGTGGTGTGTAACACAAGTCCATCTCCCCAGGAGACTCATCTCCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120220.3 ENSMUST00000123877.2 |
||
| 3UTR-3UTR TCA 90 bp | CCGAGTGACTGTCCTGATGCTGAGCATGCTTGTAACTGCAGGAGAAGGCTTTCTATAGCTGTAGCCCTGTaGGAATCCCTTTCACAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: PSDCPDAEHACNCRRRLSIAVAL*ESLSQD Trigger: GTCCTGTGAAAGGGATTCTCACAGGGCTACAGCTAT...AGAAAGCCTTCTCCTGCAGTTACAAGCATGCTCAGCATCAGGACAGTCACTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR-3UTR GCA 90 bp | GTTGAAGACAGCCTGTGGAGGGCTGTTCACTATGACACGCACCCTGCTGCTGAAAACCGGAACCTGTTCTaGTCAAATCTAATGTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VEDSLWRAVHYDTHPAAENRNLF*SNLMSA Trigger: TGCAGACATTAGATTTGAGCAGAACAGGTTCCGGTT...TTCAGCAGCAGGGTGCGTGTCATAGTGAACAGCCCTCCACAGGCTGTCTTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTGGGACAGGTATCTCAAGGAGATGAGTCTCCTGGGGAGATGGACTTGTGTACAGGAACCCAGAGATaGCACAAGTGCCAAGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: KLGQVSQGDESPGEMDLCTGTQR*HKCQVF Trigger: GAAAACTTGGCACTTGTGGCATCTCTGGGTTCCTGT...ACACAAGTCCATCTCCCCAGGAGACTCATCTCCTTGAGATACCTGTCCCAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123877.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCCTTCAAACCGGAACCTGTTCTGCTCAAATCTAATGTCTGCACAGGCTGTAGTCTCCTGGGGAGATaGACTTGTGTTACACACCAC | + |
|
Preference number: 2 (lower is better) Translates to: SSFKPEPVLLKSNVCTGCSLLGR*TCVTHH Trigger: GTGGTGTGTAACACAAGTCCATCTCCCCAGGAGACT...ACAGCCTGTGCAGACATTAGATTTGAGCAGAACAGGTTCCGGTTTGAAGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR-3UTR CCA 90 bp | CCGAGTGACTGTCCTGATGCTGAGCATGCTTGTAACTGCAGGAGAAGGCTTTCTCAGCTTGAACCTTTTTaGCATTCACCGTCCTTACAA | + |
|
Preference number: 2 (lower is better) Translates to: PSDCPDAEHACNCRRRLSQLEPF*HSPSLQ Trigger: TTGTAAGGACGGTGAATGCCAAAAAGGTTCAAGCTG...AGAAAGCCTTCTCCTGCAGTTACAAGCATGCTCAGCATCAGGACAGTCACTCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR-3UTR GCA 90 bp | CCGAGTGACTGTCCTGATGCTGAGCATGCTTGTAACTGCAGGAGAAGGCTTTCTAGGCATAAATCTTTATaGACTTTCTGCCTACGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PSDCPDAEHACNCRRRLSRHKSL*TFCLRP Trigger: AGGACGTAGGCAGAAAGTGCATAAAGATTTATGCCT...AGAAAGCCTTCTCCTGCAGTTACAAGCATGCTCAGCATCAGGACAGTCACTCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGCACTTGGACACTGAACAAGTGTGTGTTTGCAGCTTGAACCTTTTTGGCATTGCCCACACTTGGCACTaGTATAAGGCTGTTCACGAA | + |
|
Preference number: 2 (lower is better) Translates to: RHLDTEQVCVCSLNLFGIAHTWH*YKAVHE Trigger: TTCGTGAACAGCCTTATAGCAGTGCCAAGTGTGGGC...AATGCCAAAAAGGTTCAAGCTGCAAACACACACTTGTTCAGTGTCCAAGTGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR CAA 90 bp | TCTCAGAGGAGGCACTTGGACACTGAACAAGTGTGTGTTTGCAGCTaGAACCTTTTTGGCATTCACCGTCCTTACAATGTTTCTCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: SQRRHLDTEQVCVCS*NLFGIHRPYNVSLH Trigger: ATGGAGAGAAACATTGTAAGGACGGTGAATGCCAAAAAGGTTCAAGCTGCAAACACACACTTGTTCAGTGTCCAAGTGCCTCCTCTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR-3UTR GCA 90 bp | GGTCAAACCTGGGATTCCCAGAGAATGGCCACAAATTATGTTAGCCAGCTGCTTTCTTTATGCACTTTCTaGCTACGTCCTTCTCACCTA | + |
|
Preference number: 2 (lower is better) Translates to: GQTWDSQRMATNYVSQLLSLCTF*LRPSHL Trigger: TAGGTGAGAAGGACGTAGGCAGAAAGTGCATAAAGA...AAGCAGCTGGCTAACATAATTTGTGGCCATTCTCTGGGAATCCCAGGTTTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| 3UTR CCA 72 bp | CACGAATACAAGTGGCTTGCTGTTGAAGACAGCCTGTaGAGGGCTGTTCACTATGACACGCACCCTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: HEYKWLAVEDSL*RAVHYDTHPAA Trigger: AGCAGCAGGGTGCGTGTCATAGTGAACAGCCCTCCACAGGCTGTCTTCAACAGCAAGCCACTTGTATTCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR TCA 72 bp | GCCTCTTCCAAAGCTGGGACAGGTATCTCAAGGAGATaGGTCTCCTGGGGAGATGGACTTGTGTTACACACC | + |
|
Preference number: 3 (lower is better) Translates to: ASSKAGTGISRR*VSWGDGLVLHT Trigger: GGTGTGTAACACAAGTCCATCTCCCCAGGAGACTCATCTCCTTGAGATACCTGTCCCAGCTTTGGAAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR GCA 72 bp | GTCTGCACAGGCTGTGTGCTCAAGAACTCATTCTGGTaGCAAGCCTCTTCCAAAGCTGGGACAGGTATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VCTGCVLKNSFW*QASSKAGTGIS Trigger: TGAGATACCTGTCCCAGCTTTGGAAGAGGCTTGGCACCAGAATGAGTTCTTGAGCACACAGCCTGTGCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR CCA 72 bp | GACAGGTATCTCAAGGAGATGAGTCTCCTGGGGAGATaGACTTGTGTTACACACCACCTCTTCTGCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: DRYLKEMSLLGR*TCVTHHLFCRL Trigger: GAGCCTGCAGAAGAGGTGGTGTGTAACACAAGTCCATCTCCCCAGGAGACTCATCTCCTTGAGATACCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120220.3 ENSMUST00000123877.2 |
||
| 3UTR CCA 72 bp | AATGTCTGCACAGGCTGTGTGCTCAAGAACTCATTCTaGTGCCAAGCCTCTTCCAAAGCTGGGACAGGTATC | + |
|
Preference number: 3 (lower is better) Translates to: NVCTGCVLKNSF*CQASSKAGTGI Trigger: GATACCTGTCCCAGCTTTGGAAGAGGCTTGGCACCAGAATGAGTTCTTGAGCACACAGCCTGTGCAGACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR GCA 72 bp | GCCGGTTACTGTCTTCCTTCAAACCGGAACCTGTTCTaGTCAAATCTAATGTCTGCACAGGCTGTGTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: AGYCLPSNRNLF*SNLMSAQAVCS Trigger: TGAGCACACAGCCTGTGCAGACATTAGATTTGAGCAGAACAGGTTCCGGTTTGAAGGAAGACAGTAACCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR CCA 72 bp | ACTTGGCACTGCTATAAGGCTGTTCACGAATACAAGTaGCTTGCTGTTGAAGACAGCCTGTGGAGGGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: TWHCYKAVHEYK*LAVEDSLWRAV Trigger: AACAGCCCTCCACAGGCTGTCTTCAACAGCAAGCCACTTGTATTCGTGAACAGCCTTATAGCAGTGCCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR GCA 72 bp | CACCTTCGTCCAATCAGGGGCAGGCATAAATCTTTATaGACTTTCTGCCTACGTCCTTCTCACCTAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: HLRPIRGRHKSL*TFCLRPSHLDV Trigger: CACATCTAGGTGAGAAGGACGTAGGCAGAAAGTGCATAAAGATTTATGCCTGCCCCTGATTGGACGAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080348.12 ENSMUST00000120220.3 |
||
| 3UTR GCA 72 bp | CTGTTCTGCTCAAATCTAATGTCTGCACAGGCTGTGTaGTCAAGAACTCATTCTGGTGCCAAGCCTCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LFCSNLMSAQAV*SRTHSGAKPLP Trigger: TGGAAGAGGCTTGGCACCAGAATGAGTTCTTGAGCACACAGCCTGTGCAGACATTAGATTTGAGCAGAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR GCA 72 bp | CAGAGGAGGCACTTGGACACTGAACAAGTGTGTGTTTaGAGCTTGAACCTTTTTGGCATTCACCGTCCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: QRRHLDTEQVCV*SLNLFGIHRPY Trigger: GTAAGGACGGTGAATGCCAAAAAGGTTCAAGCTGCAAACACACACTTGTTCAGTGTCCAAGTGCCTCCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR TCA 72 bp | TCAGATGGCCTTTTCTCAGAGGAGGCACTTGGACACTaGACAAGTGTGTGTTTGCAGCTTGAACCTTTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SDGLFSEEALGH*TSVCLQLEPFW Trigger: CCAAAAAGGTTCAAGCTGCAAACACACACTTGTTCAGTGTCCAAGTGCCTCCTCTGAGAAAAGGCCATCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR GCA 72 bp | TTCACCGTCCTTACAATGTTTCTCTCCATTCAAAAGTaGTTGCCCACACTTGGCACTGCTATAAGGCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FTVLTMFLSIQK*LPTLGTAIRLF Trigger: GAACAGCCTTATAGCAGTGCCAAGTGTGGGCAAGCACTTTTGAATGGAGAGAAACATTGTAAGGACGGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| 3UTR GCA 72 bp | CCAATCAGGGGCAGGCATAAATCTTTATGCACTTTCTaGCTACGTCCTTCTCACCTAGATGTGATAAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PIRGRHKSLCTF*LRPSHLDVIKN Trigger: GTTCTTTATCACATCTAGGTGAGAAGGACGTAGGCAGAAAGTGCATAAAGATTTATGCCTGCCCCTGATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080348.12 ENSMUST00000120220.3 |
||
| 3UTR CCA 72 bp | TTGAAAGTTTTATTAAATACTGGCCAGGGTCAAACCTaGGATTCCCAGAGAATGGCCACAAATTATGTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LKVLLNTGQGQT*DSQRMATNYVS Trigger: GCTAACATAATTTGTGGCCATTCTCTGGGAATCCCAGGTTTGACCCTGGCCAGTATTTAATAAAACTTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR TCA 90 bp | CTCAAGGAGATGAGTCTCCTGGGGAGATGGACTTGTGTTACACACCACCTCTTCCTCCATAACTGGTTCTaGAGTCAGGGGAACCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKEMSLLGRWTCVTHHLFLHNWF*SQGNLG Trigger: GCCCAGGTTCCCCTGACTTCAGAACCAGTTATGGAG...GAAGAGGTGGTGTGTAACACAAGTCCATCTCCCCAGGAGACTCATCTCCTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120220.3 ENSMUST00000123877.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGGGGAGATGGACTTGTGTTACACACCACCTCTTCTGCAGGCTCACAAGTGGGCTATGTTCCTGTaGATGGCCACAGCCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPGEMDLCYTPPLLQAHKWAMFL*MATAIG Trigger: TCCAATGGCTGTGGCCATGCACAGGAACATAGCCCA...CTTGTGAGCCTGCAGAAGAGGTGGTGTGTAACACAAGTCCATCTCCCCAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120220.3 ENSMUST00000123877.2 |
||
| CDS-3UTR GCA 90 bp | GATGAGTCTCCTGGGGAGATGGACTTGTGTTACACACCACCTCTTCTGCAGGCTTGGGCTATGTTCCTGTaGATGGCCACAGCCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DESPGEMDLCYTPPLLQAWAMFL*MATAIG Trigger: TCCAATGGCTGTGGCCATGCACAGGAACATAGCCCA...AGCCTGCAGAAGAGGTGGTGTGTAACACAAGTCCATCTCCCCAGGAGACTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120220.3 ENSMUST00000123877.2 |
||
| CDS-3UTR TCA 90 bp | AGCCAGCTGCTTATAAAGGCAAAACCCACAAAGCTGCACACTTCCCACCTTCGTCTCCATAACTGGTTCTaGAGTCAGGGGAACCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQLLIKAKPTKLHTSHLRLHNWF*SQGNLG Trigger: GCCCAGGTTCCCCTGACTTCAGAACCAGTTATGGAG...ACGAAGGTGGGAAGTGTGCAGCTTTGTGGGTTTTGCCTTTATAAGCAGCTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CCA 90 bp | CCAGCTGCTTATAAAGGCAAAACCCACAAAGCTGCACACTTCCCACCTTCGTCCGTTGAAGACAGCCTGTaGAGGGCTGTTCACTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PAAYKGKTHKAAHFPPSSVEDSL*RAVHYD Trigger: GTCATAGTGAACAGCCCTCCACAGGCTGTCTTCAAC...GGACGAAGGTGGGAAGTGTGCAGCTTTGTGGGTTTTGCCTTTATAAGCAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| 3UTR CAA 72 bp | GTATCTCAAGGAGATGAGTCTCCTGGGGAGATGGACTaGTGTTACACACCACCTCTTCTGCAGGCTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSQGDESPGEMD*CYTPPLLQAHK Trigger: CTTGTGAGCCTGCAGAAGAGGTGGTGTGTAACACAAGTCCATCTCCCCAGGAGACTCATCTCCTTGAGATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120220.3 ENSMUST00000123877.2 |
||
| 3UTR CAA 72 bp | GGCACTGCTATAAGGCTGTTCACGAATACAAGTGGCTaGCTGTTGAAGACAGCCTGTGGAGGGCTGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GTAIRLFTNTSG*LLKTACGGLFT Trigger: AGTGAACAGCCCTCCACAGGCTGTCTTCAACAGCAAGCCACTTGTATTCGTGAACAGCCTTATAGCAGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| CDS-3UTR TCA 90 bp | TTCTGCCTACGTCCTTCTCACCTAGATGTGATAAAGAACACGCTAGGCAGCATGGGTATCTCAAGGAGATaGGTCTCCTGGGGAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FCLRPSHLDVIKNTLGSMGISRR*VSWGDG Trigger: TCCATCTCCCCAGGAGACTCATCTCCTTGAGATACC...CATGCTGCCTAGCGTGTTCTTTATCACATCTAGGTGAGAAGGACGTAGGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR TCA 90 bp | CCAGCTGCTTATAAAGGCAAAACCCACAAAGCTGCACACTTCCCACCTTCGTCCAAGGGCTTCTCATGCTaGCTATGCTCATGTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PAAYKGKTHKAAHFPPSSKGFSC*LCSCVL Trigger: AAGGACACATGAGCATAGTCAGCATGAGAAGCCCTT...GGACGAAGGTGGGAAGTGTGCAGCTTTGTGGGTTTTGCCTTTATAAGCAGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CCA 90 bp | CCGAGTGACTGTCCTGATGCTGAGCATGCTTGTAACTGCAGGAGAAGGCTTTCTCTATGTTCCTGTGCATaGCCACAGCCATTGGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSDCPDAEHACNCRRRLSLCSCA*PQPLDS Trigger: AGAATCCAATGGCTGTGGCCATGCACAGGAACATAG...AGAAAGCCTTCTCCTGCAGTTACAAGCATGCTCAGCATCAGGACAGTCACTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| CDS-3UTR CCA 90 bp | TTCTGCCTACGTCCTTCTCACCTAGATGTGATAAAGAACACGCTAGGCAGCATGATCAGGCTAGCACTCTaGCTGAAGGACTTCCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FCLRPSHLDVIKNTLGSMIRLAL*LKDFPH Trigger: ATGCGGGAAGTCCTTCAGCCAGAGTGCTAGCCTGAT...CATGCTGCCTAGCGTGTTCTTTATCACATCTAGGTGAGAAGGACGTAGGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR TCA 90 bp | GCTTATAAAGGCAAAACCCACAAAGCTGCACACTTCCCACCTTCGTCCAATCAGATAGCTGTAGCCCTGTaGGAATCCCTTTCACAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AYKGKTHKAAHFPPSSNQIAVAL*ESLSQD Trigger: GTCCTGTGAAAGGGATTCTCACAGGGCTACAGCTAT...CTGATTGGACGAAGGTGGGAAGTGTGCAGCTTTGTGGGTTTTGCCTTTATAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR TCA 90 bp | TTCTGCCTACGTCCTTCTCACCTAGATGTGATAAAGAACACGCTAGGCAGCATGGGTTGGAGAACTGCCTaGAGTATTTTCCACACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FCLRPSHLDVIKNTLGSMGWRTA*SIFHTR Trigger: GCGAGTGTGGAAAATACTTCAGGCAGTTCTCCAACC...CATGCTGCCTAGCGTGTTCTTTATCACATCTAGGTGAGAAGGACGTAGGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR TCA 90 bp | ATACTGGCCAGGGTCAAACCTGGGATTCCCAGAGAATGGCCACAAATTATGTTATGGCTTCTCTGGTGTTaGATCAGGCTAGCACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILARVKPGIPREWPQIMLWLLWC*IRLALW Trigger: CCAGAGTGCTAGCCTGATTCAACACCAGAGAAGCCA...TAACATAATTTGTGGCCATTCTCTGGGAATCCCAGGTTTGACCCTGGCCAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR GCA 90 bp | AATACTGGCCAGGGTCAAACCTGGGATTCCCAGAGAATGGCCACAAATTATGTTTGGGCTATGTTCCTGTaGATGGCCACAGCCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NTGQGQTWDSQRMATNYVWAMFL*MATAIG Trigger: TCCAATGGCTGTGGCCATGCACAGGAACATAGCCCA...AACATAATTTGTGGCCATTCTCTGGGAATCCCAGGTTTGACCCTGGCCAGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CCA 90 bp | AAGTTACGTCTTCATCCCCCATTCCAGTACAGGAACCCAGAGATGCCACAAGTGCTATGTTCCTGTGCATaGCCACAGCCATTGGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLRLHPPFQYRNPEMPQVLCSCA*PQPLDS Trigger: AGAATCCAATGGCTGTGGCCATGCACAGGAACATAG...CACTTGTGGCATCTCTGGGTTCCTGTACTGGAATGGGGGATGAAGACGTAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123877.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAGCTGCACACTTCCCACCTTCGTCCAATCAGGGGCAGGCATAAATCTTTACTTGCTACACTCAGATaGCCTTTTCTCAGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TKLHTSHLRPIRGRHKSLLATLR*PFLRGG Trigger: GCCTCCTCTGAGAAAAGGCCATCTGAGTGTAGCAAG...TAAAGATTTATGCCTGCCCCTGATTGGACGAAGGTGGGAAGTGTGCAGCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| 3UTR CAA 72 bp | GCTATAAGGCTGTTCACGAATACAAGTGGCTTGCTGTaGAAGACAGCCTGTGGAGGGCTGTTCACTATGACA | + |
|
Preference number: 4 (lower is better) Translates to: AIRLFTNTSGLL*KTACGGLFTMT Trigger: TGTCATAGTGAACAGCCCTCCACAGGCTGTCTTCAACAGCAAGCCACTTGTATTCGTGAACAGCCTTATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| CDS-3UTR TCA 90 bp | TGCCTACGTCCTTCTCACCTAGATGTGATAAAGAACACGCTAGGCAGCATGTTAGAGGCACTTGGACACTaGACAAGTGTGTGTTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLRPSHLDVIKNTLGSMLEALGH*TSVCLQ Trigger: CTGCAAACACACACTTGTTCAGTGTCCAAGTGCCTC...TAACATGCTGCCTAGCGTGTTCTTTATCACATCTAGGTGAGAAGGACGTAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR GCA 90 bp | CTGGCCAGGGTCAAACCTGGGATTCCCAGAGAATGGCCACAAATTATGTTAGCCAACCGGAACCTGTTCTaGTCAAATCTAATGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LARVKPGIPREWPQIMLANRNLF*SNLMSA Trigger: TGCAGACATTAGATTTGAGCAGAACAGGTTCCGGTT...GGCTAACATAATTTGTGGCCATTCTCTGGGAATCCCAGGTTTGACCCTGGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR GCA 90 bp | TTTCTGCCTACGTCCTTCTCACCTAGATGTGATAAAGAACACGCTAGGCAGCATGCCCACACTTGGCACTaGTATAAGGCTGTTCACGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLPTSFSPRCDKEHARQHAHTWH*YKAVHE Trigger: TTCGTGAACAGCCTTATAGCAGTGCCAAGTGTGGGC...ATGCTGCCTAGCGTGTTCTTTATCACATCTAGGTGAGAAGGACGTAGGCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR GCA 90 bp | GGTCAAACCTGGGATTCCCAGAGAATGGCCACAAATTATGTTAGCCAGCTGCTTCCATTCAAAAGTGCTTaGCCACACTTGGCACTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GQTWDSQRMATNYVSQLLPFKSA*PHLALL Trigger: TAGCAGTGCCAAGTGTGGGCAAGCACTTTTGAATGG...AAGCAGCTGGCTAACATAATTTGTGGCCATTCTCTGGGAATCCCAGGTTTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR GCA 90 bp | CTGCACACTTCCCACCTTCGTCCAATCAGGGGCAGGCATAAATCTTTATGCACTGAGCATGCTTGTAACTaGAGGAGAAGGCTTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHTSHLRPIRGRHKSLCTEHACN*RRRLSH Trigger: ATGAGAAAGCCTTCTCCTGCAGTTACAAGCATGCTC...AGTGCATAAAGATTTATGCCTGCCCCTGATTGGACGAAGGTGGGAAGTGTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CCA 90 bp | ATACTGGCCAGGGTCAAACCTGGGATTCCCAGAGAATGGCCACAAATTATGTTAAGTCTCCTGGGGAGATaGACTTGTGTTACACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ILARVKPGIPREWPQIMLSLLGR*TCVTHH Trigger: GTGGTGTGTAACACAAGTCCATCTCCCCAGGAGACT...TAACATAATTTGTGGCCATTCTCTGGGAATCCCAGGTTTGACCCTGGCCAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CCA 90 bp | GCTTATAAAGGCAAAACCCACAAAGCTGCACACTTCCCACCTTCGTCCAATCAGGGCTCAGTCAACCCATaGGATCTGCAACTTGACATA | + |
|
Preference number: 4 (lower is better) Translates to: AYKGKTHKAAHFPPSSNQGSVNP*DLQLDI Trigger: TATGTCAAGTTGCAGATCCCATGGGTTGACTGAGCC...CTGATTGGACGAAGGTGGGAAGTGTGCAGCTTTGTGGGTTTTGCCTTTATAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR TCA 90 bp | GCTTATAAAGGCAAAACCCACAAAGCTGCACACTTCCCACCTTCGTCCAATCAGTGTGTGTTTGCAGCTTaGACCTTTTTGGCATTCACC | + |
|
Preference number: 4 (lower is better) Translates to: AYKGKTHKAAHFPPSSNQCVFAA*TFLAFT Trigger: GGTGAATGCCAAAAAGGTTCAAGCTGCAAACACACA...CTGATTGGACGAAGGTGGGAAGTGTGCAGCTTTGTGGGTTTTGCCTTTATAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CCA 90 bp | AATACTGGCCAGGGTCAAACCTGGGATTCCCAGAGAATGGCCACAAATTATGTTCTATGTTCCTGTGCATaGCCACAGCCATTGGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: NTGQGQTWDSQRMATNYVLCSCA*PQPLDS Trigger: AGAATCCAATGGCTGTGGCCATGCACAGGAACATAG...AACATAATTTGTGGCCATTCTCTGGGAATCCCAGGTTTGACCCTGGCCAGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CCA 90 bp | GAAAGTTTTATTAAATACTGGCCAGGGTCAAACCTGGGATTCCCAGAGAATGGCGTGCTTGCCCACACTTaGCACTGCTATAAGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESFIKYWPGSNLGFPENGVLAHT*HCYKAV Trigger: AACAGCCTTATAGCAGTGCCAAGTGTGGGCAAGCAC...GCCATTCTCTGGGAATCCCAGGTTTGACCCTGGCCAGTATTTAATAAAACTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| 3UTR CAA 72 bp | ACCGTCCTTACAATGTTTCTCTCCATTCAAAAGTGCTaGCCCACACTTGGCACTGCTATAAGGCTGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: TVLTMFLSIQKC*PTLGTAIRLFT Trigger: CGTGAACAGCCTTATAGCAGTGCCAAGTGTGGGCAAGCACTTTTGAATGGAGAGAAACATTGTAAGGACGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| CDS-3UTR CCA 90 bp | GTTAGCCAGCTGCTTATAAAGGCAAAACCCACAAAGCTGCACACTTCCCACCTTCAGCTTGAACCTTTTTaGCATTCACCGTCCTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: VSQLLIKAKPTKLHTSHLQLEPF*HSPSLQ Trigger: TTGTAAGGACGGTGAATGCCAAAAAGGTTCAAGCTG...AAGGTGGGAAGTGTGCAGCTTTGTGGGTTTTGCCTTTATAAGCAGCTGGCTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR TCA 90 bp | ACAAAGCTGCACACTTCCCACCTTCGTCCAATCAGGGGCAGGCATAAATCTTTAGGTTGGATTTGTACGTaGAGGATTTTCTACATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKLHTSHLRPIRGRHKSLGWICT*RIFYIP Trigger: TGGAATGTAGAAAATCCTTCACGTACAAATCCAACC...TAAAGATTTATGCCTGCCCCTGATTGGACGAAGGTGGGAAGTGTGCAGCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR GCA 90 bp | AATTATGTTAGCCAGCTGCTTATAAAGGCAAAACCCACAAAGCTGCACACTTCCACAGGAACCCAGAGATaGCACAAGTGCCAAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NYVSQLLIKAKPTKLHTSTGTQR*HKCQVF Trigger: GAAAACTTGGCACTTGTGGCATCTCTGGGTTCCTGT...GGAAGTGTGCAGCTTTGTGGGTTTTGCCTTTATAAGCAGCTGGCTAACATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR GCA 90 bp | ATACTGGCCAGGGTCAAACCTGGGATTCCCAGAGAATGGCCACAAATTATGTTAGAACAAGTGTGTGTTTaGAGCTTGAACCTTTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILARVKPGIPREWPQIMLEQVCV*SLNLFG Trigger: GCCAAAAAGGTTCAAGCTGCAAACACACACTTGTTC...TAACATAATTTGTGGCCATTCTCTGGGAATCCCAGGTTTGACCCTGGCCAGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| 3UTR CAA 72 bp | AGGCACTTGGACACTGAACAAGTGTGTGTTTGCAGCTaGAACCTTTTTGGCATTCACCGTCCTTACAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RHLDTEQVCVCS*NLFGIHRPYNV Trigger: AACATTGTAAGGACGGTGAATGCCAAAAAGGTTCAAGCTGCAAACACACACTTGTTCAGTGTCCAAGTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| CDS GCA 90 bp | TCCATAACTGGTTCTGAAGTCAGGGGAACCTGGGCTATGTTCCTGTaGATGGCCACAGCCATTGGATTCTGTAGAGGAAGCAAGGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SITGSEVRGTWAMFL*MATAIGFCRGSKDQ Trigger: CTGGTCCTTGCTTCCTCTACAGAATCCAATGGCTGTGGCCATGCACAGGAACATAGCCCAGGTTCCCCTGACTTCAGAACCAGTTATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080348.12 ENSMUST00000120220.3 |
||
| CDS CCA 90 bp | CAAAGCTGGGACAGGTATCTCAAGGAGATGAGTCTCCTGGGGAGATaGACTTGTGTTACACACCACCTCTTCTGCAGGCTCACAAGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: QSWDRYLKEMSLLGR*TCVTHHLFCRLTSY Trigger: GTAACTTGTGAGCCTGCAGAAGAGGTGGTGTGTAACACAAGTCCATCTCCCCAGGAGACTCATCTCCTTGAGATACCTGTCCCAGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CAA 90 bp | AGCCAGCTGCTTATAAAGGCAAAACCCACAAAGCTGCACACTTCCCACCTTCGTGCATGGCCACAGCCATaGGATTCTGTAGAGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SQLLIKAKPTKLHTSHLRAWPQP*DSVEEA Trigger: TGCTTCCTCTACAGAATCCAATGGCTGTGGCCATGC...ACGAAGGTGGGAAGTGTGCAGCTTTGTGGGTTTTGCCTTTATAAGCAGCTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CAA 90 bp | CTGCACACTTCCCACCTTCGTCCAATCAGGGGCAGGCATAAATCTTTATGCACTTTGAGGCGGCACTTTTaGCTGAAGGGCTTCTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: LHTSHLRPIRGRHKSLCTLRRHF*LKGFSC Trigger: GCATGAGAAGCCCTTCAGCAAAAAGTGCCGCCTCAA...AGTGCATAAAGATTTATGCCTGCCCCTGATTGGACGAAGGTGGGAAGTGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CAA 90 bp | AATACTGGCCAGGGTCAAACCTGGGATTCCCAGAGAATGGCCACAAATTATGTTACAAGTGGCTTGCTGTaGAAGACAGCCTGTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NTGQGQTWDSQRMATNYVTSGLL*KTACGG Trigger: CCCTCCACAGGCTGTCTTCAACAGCAAGCCACTTGT...AACATAATTTGTGGCCATTCTCTGGGAATCCCAGGTTTGACCCTGGCCAGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CAA 90 bp | GCTTATAAAGGCAAAACCCACAAAGCTGCACACTTCCCACCTTCGTCCAATCAGGTGGCTTCTCTGGTGTaGAATCAGGCTAGCACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AYKGKTHKAAHFPPSSNQVASLV*NQASTL Trigger: CAGAGTGCTAGCCTGATTCAACACCAGAGAAGCCAC...CTGATTGGACGAAGGTGGGAAGTGTGCAGCTTTGTGGGTTTTGCCTTTATAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CAA 90 bp | TCTTCCTTCAAACCGGAACCTGTTCTGCTCAAATCTAATGTCTGCACAGGCTGTGCATGGCCACAGCCATaGGATTCTGTAGAGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSFKPEPVLLKSNVCTGCAWPQP*DSVEEA Trigger: TGCTTCCTCTACAGAATCCAATGGCTGTGGCCATGC...ACAGCCTGTGCAGACATTAGATTTGAGCAGAACAGGTTCCGGTTTGAAGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120220.3 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCTACGTCCTTCTCACCTAGATGTGATAAAGAACACGCTAGGCAGCATGTCTCAGAGGAGGCACTaGGACACTGAACAAGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FCLRPSHLDVIKNTLGSMSQRRH*DTEQVC Trigger: ACACACTTGTTCAGTGTCCAAGTGCCTCCTCTGAGA...CATGCTGCCTAGCGTGTTCTTTATCACATCTAGGTGAGAAGGACGTAGGCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CAA 90 bp | TTTCTGCCTACGTCCTTCTCACCTAGATGTGATAAAGAACACGCTAGGCAGCATCGGTGTCGAATGAGGTaGGAGAACTGCCTGAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FLPTSFSPRCDKEHARQHRCRMR*ENCLKY Trigger: ATACTTCAGGCAGTTCTCCAACCTCATTCGACACCG...ATGCTGCCTAGCGTGTTCTTTATCACATCTAGGTGAGAAGGACGTAGGCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CAA 90 bp | CACACTTCCCACCTTCGTCCAATCAGGGGCAGGCATAAATCTTTATGCACTTTCAAGGCTTTCTCATACTaGCTACACTCAGATGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HTSHLRPIRGRHKSLCTFKAFSY*LHSDGL Trigger: AAGGCCATCTGAGTGTAGCAAGTATGAGAAAGCCTT...GAAAGTGCATAAAGATTTATGCCTGCCCCTGATTGGACGAAGGTGGGAAGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CAA 90 bp | GAAAGTTTTATTAAATACTGGCCAGGGTCAAACCTGGGATTCCCAGAGAATGGCACGAATACAAGTGGCTaGCTGTTGAAGACAGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ESFIKYWPGSNLGFPENGTNTSG*LLKTAC Trigger: ACAGGCTGTCTTCAACAGCAAGCCACTTGTATTCGT...GCCATTCTCTGGGAATCCCAGGTTTGACCCTGGCCAGTATTTAATAAAACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CAA 90 bp | CTGCACACTTCCCACCTTCGTCCAATCAGGGGCAGGCATAAATCTTTATGCACTTTTATAGGGCCTTTCTaGAGGACAAATTCTGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LHTSHLRPIRGRHKSLCTFIGPF*RTNSVL Trigger: CAAGACAGAATTTGTCCTCAAGAAAGGCCCTATAAA...AGTGCATAAAGATTTATGCCTGCCCCTGATTGGACGAAGGTGGGAAGTGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CAA 90 bp | AATTATGTTAGCCAGCTGCTTATAAAGGCAAAACCCACAAAGCTGCACACTTCCAGGACAAATTCTGTCTaGTGTGTTGAGGCGGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: NYVSQLLIKAKPTKLHTSRTNSV*CVEAAL Trigger: AAGTGCCGCCTCAACACACAAGACAGAATTTGTCCT...GGAAGTGTGCAGCTTTGTGGGTTTTGCCTTTATAAGCAGCTGGCTAACATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS-3UTR CAA 90 bp | AATTATGTTAGCCAGCTGCTTATAAAGGCAAAACCCACAAAGCTGCACACTTCCTGGACGAGGATGAATTaGCGACTGAAGGATTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NYVSQLLIKAKPTKLHTSWTRMN*RLKDFS Trigger: TGAGAAATCCTTCAGTCGCAAATTCATCCTCGTCCA...GGAAGTGTGCAGCTTTGTGGGTTTTGCCTTTATAAGCAGCTGGCTAACATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080348.12 |
||
| CDS CAA 72 bp | GAACCTGGGCTATGTTCCTGTGCATGGCCACAGCCATaGGATTCTGTAGAGGAAGCAAGGACCAGGTCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: EPGLCSCAWPQP*DSVEEARTRSP Trigger: CGGCGACCTGGTCCTTGCTTCCTCTACAGAATCCAATGGCTGTGGCCATGCACAGGAACATAGCCCAGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080348.12 ENSMUST00000120220.3 |
||
| CDS CAA 90 bp | AAGTCAGGGGAACCTGGGCTATGTTCCTGTGCATGGCCACAGCCATaGGATTCTGTAGAGGAAGCAAGGACCAGGTCGCCGAGGTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KSGEPGLCSCAWPQP*DSVEEARTRSPRSL Trigger: AAGAGACCTCGGCGACCTGGTCCTTGCTTCCTCTACAGAATCCAATGGCTGTGGCCATGCACAGGAACATAGCCCAGGTTCCCCTGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080348.12 ENSMUST00000120220.3 |
||
| CDS GCA 72 bp | GGTTCTGAAGTCAGGGGAACCTGGGCTATGTTCCTGTaGATGGCCACAGCCATTGGATTCTGTAGAGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSEVRGTWAMFL*MATAIGFCRGS Trigger: GCTTCCTCTACAGAATCCAATGGCTGTGGCCATGCACAGGAACATAGCCCAGGTTCCCCTGACTTCAGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080348.12 ENSMUST00000120220.3 |
||
| CDS CCA 72 bp | CTGAAGTCAGGGGAACCTGGGCTATGTTCCTGTGCATaGCCACAGCCATTGGATTCTGTAGAGGAAGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LKSGEPGLCSCA*PQPLDSVEEAR Trigger: CCTTGCTTCCTCTACAGAATCCAATGGCTGTGGCCATGCACAGGAACATAGCCCAGGTTCCCCTGACTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080348.12 ENSMUST00000120220.3 |
||
| CDS CCA 72 bp | CCAAGCTCCATAACTGGTTCTGAAGTCAGGGGAACCTaGGCTATGTTCCTGTGCATGGCCACAGCCATTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSSITGSEVRGT*AMFLCMATAIG Trigger: TCCAATGGCTGTGGCCATGCACAGGAACATAGCCCAGGTTCCCCTGACTTCAGAACCAGTTATGGAGCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080348.12 ENSMUST00000120220.3 ENSMUST00000123877.2 |
||