Pregenerated sensors for ZFP534 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000062518

Ensembl transcript IDs: ENSMUST00000117638.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR CCA 90 bp	TTAAGTTTCTACCCTGTAAGTATTCACTGTTACAGTCTAGGAACTAGGCCAAAACTAAGTTGGGATTTCTaGGTAAAGCATTTGTCACAT	+
Preference number: 4 (lower is better) Translates to: LSFYPVSIHCYSLGTRPKLSWDF*VKHLSH Trigger: ATGTGACAAATGCTTTACCCAGAAATCCCAACTTAG...TTTTGGCCTAGTTCCTAGACTGTAACAGTGAATACTTACAGGGTAGAAACTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117638.2
CDS-3UTR CAA 90 bp	TTAAGTTTCTACCCTGTAAGTATTCACTGTTACAGTCTAGGAACTAGGCCAAAAGGGCTTAAGTCTTTTTaGGGTCGAGAATTGAAGAGC	+
Preference number: 5 (lower is better) Translates to: LSFYPVSIHCYSLGTRPKGLKSF*GRELKS Trigger: GCTCTTCAATTCTCGACCCAAAAAAGACTTAAGCCC...TTTTGGCCTAGTTCCTAGACTGTAACAGTGAATACTTACAGGGTAGAAACTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117638.2
CDS-3UTR CAA 90 bp	TTAAGTTTCTACCCTGTAAGTATTCACTGTTACAGTCTAGGAACTAGGCCAAAACTGATGAATACTAAGTaGGGATTTCTGGGTAAAGCA	+
Preference number: 5 (lower is better) Translates to: LSFYPVSIHCYSLGTRPKLMNTK*GFLGKA Trigger: TGCTTTACCCAGAAATCCCAACTTAGTATTCATCAG...TTTTGGCCTAGTTCCTAGACTGTAACAGTGAATACTTACAGGGTAGAAACTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117638.2
CDS-3UTR CAA 90 bp	TTAAGTTTCTACCCTGTAAGTATTCACTGTTACAGTCTAGGAACTAGGCCAAAAACTAAGATAGGATTGTaGGGTAAAGCATTTGTCACA	+
Preference number: 5 (lower is better) Translates to: LSFYPVSIHCYSLGTRPKTKIGL*GKAFVT Trigger: TGTGACAAATGCTTTACCCAACAATCCTATCTTAGT...TTTTGGCCTAGTTCCTAGACTGTAACAGTGAATACTTACAGGGTAGAAACTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117638.2
CDS TCA 72 bp	ATATTCATGTGTTCATGGACAATGTACTGGCTGTCTTaGTCCAATACCTTCCCATTCTTTCCACGTATGCAA	+
Preference number: 6 (lower is better) Translates to: IFMCSWTMYWLS*SNTFPFFPRMQ Trigger: TTGCATACGTGGAAAGAATGGGAAGGTATTGGATCAAGACAGCCAGTACATTGTCCATGAACACATGAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117638.2

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