RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP523 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024220

Ensembl transcript IDs: ENSMUST00000002318.8, ENSMUST00000073534.10, ENSMUST00000129522.4, ENSMUST00000133868.2, ENSMUST00000155030.2, ENSMUST00000161275.3, ENSMUST00000232845.2, ENSMUST00000233613.2, ENSMUST00000233841.2, ENSMUST00000233904.2

Found 496 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGGCCACCACTGTGTCCGTGCCGAAGCCTTCCTCGTCTTCCGCTaGCAGGTCCTCCAAGCCCGCCTCCGTCTGCACAGCCAGGATGGC +
Preference number: 1 (lower is better)
Translates to: QGHHCVRAEAFLVFR*QVLQARLRLHSQDG
Trigger: GCCATCCTGGCTGTGCAGACGGAGGCGGGCTTGGAGGACCTGGCAGCGGAAGACGAGGAAGGCTTCGGCACGGACACAGTGGTGGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR CCA 90 bp CCGCTGCCAGGTCCTCCAAGCCCGCCTCCGTCTGCACAGCCAGGATaGCGCTGTCCGACGGCACAGGCACAGGGTGATGGATGTAGGCAG +
Preference number: 1 (lower is better)
Translates to: PLPGPPSPPPSAQPG*RCPTAQAQGDGCRQ
Trigger: CTGCCTACATCCATCACCCTGTGCCTGTGCCGTCGGACAGCGCCATCCTGGCTGTGCAGACGGAGGCGGGCTTGGAGGACCTGGCAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR CCA 90 bp GCCCCGGAGGCAGGGCTGCCTGTGAGCATGGAGCCTTCTCCAGTGTaGTGTGGGAGCTGGTCCTCTTGGGCTCAGCAGCCGCTCTCTGTG +
Preference number: 1 (lower is better)
Translates to: APEAGLPVSMEPSPV*CGSWSSWAQQPLSV
Trigger: CACAGAGAGCGGCTGCTGAGCCCAAGAGGACCAGCTCCCACACCACACTGGAGAAGGCTCCATGCTCACAGGCAGCCCTGCCTCCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR CCA 90 bp TGGCGCTGTCCGACGGCACAGGCACAGGGTGATGGATGTAGGCAGTaGAACCGTCTTCCAGCTGGACAGCTTCCAGGGCGCTGGGGTCAC +
Preference number: 1 (lower is better)
Translates to: WRCPTAQAQGDGCRQ*NRLPAGQLPGRWGH
Trigger: GTGACCCCAGCGCCCTGGAAGCTGTCCAGCTGGAAGACGGTTCCACTGCCTACATCCATCACCCTGTGCCTGTGCCGTCGGACAGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR GCA 90 bp GGGACGCAGGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTaGCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTT +
Preference number: 1 (lower is better)
Translates to: GTQVSGSLVTKLSVD*LLPGPHLGCSPQTF
Trigger: AAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR GCA 90 bp GCTCAGCAGCCGCTCTCTGTGGTTTCCAGGGTCACAGCCCCTTGCTaGATAGCAGCAGTGGCTACGCTTATGGCCTCCTCCAGGGTCTGC +
Preference number: 1 (lower is better)
Translates to: AQQPLSVVSRVTAPC*IAAVATLMASSRVC
Trigger: GCAGACCCTGGAGGAGGCCATAAGCGTAGCCACTGCTGCTATGCAGCAAGGGGCTGTGACCCTGGAAACCACAGAGAGCGGCTGCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR CCA 90 bp GTGAGCATGGAGCCTTCTCCAGTGTGGTGTGGGAGCTGGTCCTCTTaGGCTCAGCAGCCGCTCTCTGTGGTTTCCAGGGTCACAGCCCCT +
Preference number: 1 (lower is better)
Translates to: VSMEPSPVWCGSWSS*AQQPLSVVSRVTAP
Trigger: AGGGGCTGTGACCCTGGAAACCACAGAGAGCGGCTGCTGAGCCCAAGAGGACCAGCTCCCACACCACACTGGAGAAGGCTCCATGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR GCA 90 bp GCTGCCCTTTGCCATTGTGGGAAGCAGGGCTATCGTGCAGAACCTTaGTGGCATACTGCTCCAGGGCCACCACTGTGTCCGTGCCGAAGC +
Preference number: 1 (lower is better)
Translates to: AALCHCGKQGYRAEP*WHTAPGPPLCPCRS
Trigger: GCTTCGGCACGGACACAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATAGCCCTGCTTCCCACAATGGCAAAGGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR GCA 90 bp GCCCCTGAGGAATTAATTCTGACTGTGGTGGTGGGAAGTCCCTGGTaGCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGG +
Preference number: 1 (lower is better)
Translates to: APEELILTVVVGSPW*QVARHLGHRSPRRR
Trigger: CCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCACCACAGTCAGAATTAATTCCTCAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR GCA 90 bp CCATTGTGGGAAGCAGGGCTATCGTGCAGAACCTTGCTGGCATACTaGTCCAGGGCCACCACTGTGTCCGTGCCGAAGCCTTCCTCGTCT +
Preference number: 1 (lower is better)
Translates to: PLWEAGLSCRTLLAY*SRATTVSVPKPSSS
Trigger: AGACGAGGAAGGCTTCGGCACGGACACAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATAGCCCTGCTTCCCACAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR CCA 90 bp GACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTaGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGG +
Preference number: 1 (lower is better)
Translates to: DRAGIISCQGRDAGV*QPGDQAQCRLPAAW
Trigger: CCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR CCA 90 bp TCTGCTGGTCCTCCAGCTGCACTGCGATGTGTGTTCCGTTGGCTGTaGCCAACAGCGCCACCTGTTGGTGATGAAGAGACGCCACGCTTG +
Preference number: 1 (lower is better)
Translates to: SAGPPAALRCVFRWL*PTAPPVGDEETPRL
Trigger: CAAGCGTGGCGTCTCTTCATCACCAACAGGTGGCGCTGTTGGCCACAGCCAACGGAACACACATCGCAGTGCAGCTGGAGGACCAGCAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR CCA 90 bp GCCCTTTGCCATTGTGGGAAGCAGGGCTATCGTGCAGAACCTTGCTaGCATACTGCTCCAGGGCCACCACTGTGTCCGTGCCGAAGCCTT +
Preference number: 1 (lower is better)
Translates to: ALCHCGKQGYRAEPC*HTAPGPPLCPCRSL
Trigger: AAGGCTTCGGCACGGACACAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATAGCCCTGCTTCCCACAATGGCAAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR GCA 90 bp ACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTaGCAAGGGAGGGACGCAGGTGTCTGGCAGCCTGGTGACCAAGCT +
Preference number: 1 (lower is better)
Translates to: TTSLRKGVDRAGIIS*QGRDAGVWQPGDQA
Trigger: AGCTTGGTCACCAGGCTGCCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR CCA 90 bp CAGGCCCCTGAGGAATTAATTCTGACTGTGGTGGTGGGAAGTCCCTaGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGA +
Preference number: 1 (lower is better)
Translates to: QAPEELILTVVVGSP*CQVARHLGHRSPRR
Trigger: TCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCACCACAGTCAGAATTAATTCCTCAGGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR TCA 90 bp GCCACAGACAAGCGAAGAGGCACCTTCACTCCAGCCACAGGCCCCTaGGGAATTAATTCTGACTGTGGTGGTGGGAAGTCCCTGGTGCCA +
Preference number: 1 (lower is better)
Translates to: ATDKRRGTFTPATGP*GINSDCGGGKSLVP
Trigger: TGGCACCAGGGACTTCCCACCACCACAGTCAGAATTAATTCCTCAGGGGCCTGTGGCTGGAGTGAAGGTGCCTCTTCGCTTGTCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR TCA 90 bp TGTGGCCAACAGCGCCACCTGTTGGTGATGAAGAGACGCCACGCTTaGGTCCTCAGTCACCAAGGCCCCAGAGGTAATGATTGTGACGGG +
Preference number: 1 (lower is better)
Translates to: CGQQRHLLVMKRRHA*VLSHQGPRGNDCDG
Trigger: CCCGTCACAATCATTACCTCTGGGGCCTTGGTGACTGAGGACTCAAGCGTGGCGTCTCTTCATCACCAACAGGTGGCGCTGTTGGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233841.2
3UTR CCA 90 bp GGTCCCCTGTGTGAGCTCGTTCGTGGACCTTTAAGTGATGGGCAGTaGTGTAGAGACGACCACAGCCCTTGTAGCCACAGCGGAAAGCTC +
Preference number: 1 (lower is better)
Translates to: GPLCELVRGPLSDGQ*CRDDHSPCSHSGKL
Trigger: GAGCTTTCCGCTGTGGCTACAAGGGCTGTGGTCGTCTCTACACCACTGCCCATCACTTAAAGGTCCACGAACGAGCTCACACAGGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR TCA 90 bp TGTGGCCAACAGCGCCACCTGTTGGTGATGAAGAGACGCCACGCTTaGGTCCTCAGTCACCAAGGCCCCAGAGGTAATGATTGTGACCTG +
Preference number: 1 (lower is better)
Translates to: CGQQRHLLVMKRRHA*VLSHQGPRGNDCDL
Trigger: CAGGTCACAATCATTACCTCTGGGGCCTTGGTGACTGAGGACTCAAGCGTGGCGTCTCTTCATCACCAACAGGTGGCGCTGTTGGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129522.4
3UTR TCA 90 bp CACCTGTGTGGGTCCGCACGTGTTTCTGCAGGTCCCCTGAGGTCTTaGAGGCTTTGCTGCACAGCTCCTCTGGGCACTTGTATGGTTTCT +
Preference number: 1 (lower is better)
Translates to: HLCGSARVSAGPLRS*RLCCTAPLGTCMVS
Trigger: AGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGCAAAGCCTTCAAGACCTCAGGGGACCTGCAGAAACACGTGCGGACCCACACAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR-3UTR TCA 90 bp GTGGTGGGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGCAGGGCTGCCTGTaGGCATGGAGCCTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: VVGSPWCQVARHLGHRSPRQGCL*AWSLLQ
Trigger: CTGGAGAAGGCTCCATGCTCACAGGCAGCCCTGCCT...GGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR GCA 90 bp GGTGGCGCTGGTGAAGCCACGACCACAGTGGGGCTCGGGGCAGGTGTAGGGCCGTATCGTGCAGAACCTTaGTGGCATACTGCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: GGAGEATTTVGLGAGVGPYRAEP*WHTAPG
Trigger: CCCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATA...CGGCCCTACACCTGCCCCGAGCCCCACTGTGGTCGTGGCTTCACCAGCGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR CAA 90 bp TGTGAGCATGGAGCCTTCTCCAGTGTGGTGTGGGAGCTGGTCCTCTaGGGCTCAGCAGCCGCTCTCTGTGGTTTCCAGGGTCACAGCCCC +
Preference number: 2 (lower is better)
Translates to: CEHGAFSSVVWELVL*GSAAALCGFQGHSP
Trigger: GGGGCTGTGACCCTGGAAACCACAGAGAGCGGCTGCTGAGCCCAAGAGGACCAGCTCCCACACCACACTGGAGAAGGCTCCATGCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR-3UTR TCA 90 bp GTGGTGGGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCTTGCCTCATCACCCCTaGGGCCTATGCGGCCATCTT +
Preference number: 2 (lower is better)
Translates to: VVGSPWCQVARHLGHRSPLPHHP*GLCGHL
Trigger: AAGATGGCCGCATAGGCCTCAGGGGTGATGAGGCAA...GGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR TCA 90 bp GGGACGCAGGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGTTGCCTCATCACCCCTaGGGCCTATGCGGCCATCTT +
Preference number: 2 (lower is better)
Translates to: GTQVSGSLVTKLSVDCLLLPHHP*GLCGHL
Trigger: AAGATGGCCGCATAGGCCTCAGGGGTGATGAGGCAA...CAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR TCA 90 bp CCTCGTCCACCTAGTCACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATTGGGAGGCGCTGGGCTaGAAGCTGTCGGCCTTTCCC +
Preference number: 2 (lower is better)
Translates to: PRPPSHHLPEEGSGQSRNWEALG*KLSAFP
Trigger: GGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCA...ATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGTGACTAGGTGGACGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR GCA 90 bp GTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTAAGCTCAGTGTCGACTaGCTGCTGCCTGGCCCTCAT +
Preference number: 2 (lower is better)
Translates to: VSGSLVTKLSVDCLLPGPKLSVD*LLPGPH
Trigger: ATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTT...AGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR GCA 90 bp GTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGGTAAGCTCAGTGTCGACTaGCTGCTGCCTGGCCCTCAT +
Preference number: 2 (lower is better)
Translates to: VPGAKWLGILATVAPGDGKLSVD*LLPGPH
Trigger: ATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTT...ACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp GGGACGCAGGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGGAGCCTTCTCCAGTGTaGTGTGGGAGCTGGTCCTCT +
Preference number: 2 (lower is better)
Translates to: GTQVSGSLVTKLSVDCLLEPSPV*CGSWSS
Trigger: AGAGGACCAGCTCCCACACCACACTGGAGAAGGCTC...CAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp ACGCAGGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTATGCGGCCATCTTCTTaGGGTCAGCTGTGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: TQVSGSLVTKLSVDCLLPMRPSS*GQLWLG
Trigger: CCCCAGCCACAGCTGACCCCAAGAAGATGGCCGCAT...AGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp ACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGATGCGGCCATCTTCTTaGGGTCAGCTGTGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: TVIAGRRWAESCRPFPWWMRPSS*GQLWLG
Trigger: CCCCAGCCACAGCTGACCCCAAGAAGATGGCCGCAT...CCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp CTGGTCCTCTTGGGCTCAGCAGCCGCTCTCTGTGGTTTCCAGGGTCACAGCCCCCGATGTGTGTTCCGTTaGCTGTGGCCAACAGCGCCA +
Preference number: 2 (lower is better)
Translates to: LVLLGSAAALCGFQGHSPRCVFR*LWPTAP
Trigger: TGGCGCTGTTGGCCACAGCCAACGGAACACACATCG...GGGGCTGTGACCCTGGAAACCACAGAGAGCGGCTGCTGAGCCCAAGAGGACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR-3UTR CCA 90 bp ACCACTGTGTCCGTGCCGAAGCCTTCCTCGTCTTCCGCTGCCAGGTCCTCCAAGGAACCGTCTTCCAGCTaGACAGCTTCCAGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: TTVSVPKPSSSSAARSSKEPSSS*TASRAL
Trigger: CAGCGCCCTGGAAGCTGTCCAGCTGGAAGACGGTTC...CTTGGAGGACCTGGCAGCGGAAGACGAGGAAGGCTTCGGCACGGACACAGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR-3UTR TCA 90 bp AGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCAAGGCAGGGCTGCCTGTaGGCATGGAGCCTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: SLGTGHSLASLPQTSEEARQGCL*AWSLLQ
Trigger: CTGGAGAAGGCTCCATGCTCACAGGCAGCCCTGCCT...TGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR TCA 90 bp TGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTAGGCAGGGCTGCCTGTaGGCATGGAGCCTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: WVQATRLPLCHRQAKRHLRQGCL*AWSLLQ
Trigger: CTGGAGAAGGCTCCATGCTCACAGGCAGCCCTGCCT...AAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR TCA 90 bp CAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGTGTCTGGCAGCCTGGTaGCCAAGCTCAGTGTCGACT +
Preference number: 2 (lower is better)
Translates to: QPGDQAQCRLPAAWPSSWCLAAW*PSSVST
Trigger: AGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACA...CCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR TCA 90 bp GACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTGGCAGCCTTGGGAGGCGCTGGGCTaGAAGCTGTCGGCCTTTCCC +
Preference number: 2 (lower is better)
Translates to: DRAGIISCQGRDAGVWQPWEALG*KLSAFP
Trigger: GGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCA...AGGCTGCCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR GCA 90 bp GGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCGCAGGAATAATATCCTaGCAAGGGAGGGACGCAGGT +
Preference number: 2 (lower is better)
Translates to: GVWQPGDQAQCRLPAAWPAGIIS*QGRDAG
Trigger: ACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGC...GGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp CGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTTTCTCCAGTGTGGTGTaGGAGCTGGTCCTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: RLLLGGAGLKAVGLSPGGFSSVV*ELVLLG
Trigger: GCCCAAGAGGACCAGCTCCCACACCACACTGGAGAA...ACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp CCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGGTTATTCTCCAGTGTGGTGTaGGAGCTGGTCCTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: PWCQVARHLGHRSPRRRLFSSVV*ELVLLG
Trigger: GCCCAAGAGGACCAGCTCCCACACCACACTGGAGAA...TAACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp CGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTGAGCCTTCTCCAGTGTaGTGTGGGAGCTGGTCCTCT +
Preference number: 2 (lower is better)
Translates to: RLLLGGAGLKAVGLSPGGEPSPV*CGSWSS
Trigger: AGAGGACCAGCTCCCACACCACACTGGAGAAGGCTC...ACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp TCCCCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGGAGCCTTCTCCAGTGTaGTGTGGGAGCTGGTCCTCT +
Preference number: 2 (lower is better)
Translates to: SPAVWVQATRLPLCHRQAEPSPV*CGSWSS
Trigger: AGAGGACCAGCTCCCACACCACACTGGAGAAGGCTC...CGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp CAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCGTGTTCCGTTGGCTGTaGCCAACAGCGCCACCTGTT +
Preference number: 2 (lower is better)
Translates to: QETVIAGRRWAESCRPFPVFRWL*PTAPPV
Trigger: AACAGGTGGCGCTGTTGGCCACAGCCAACGGAACAC...GGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR-3UTR CCA 90 bp GGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGATGTGTGTTCCGTTaGCTGTGGCCAACAGCGCCA +
Preference number: 2 (lower is better)
Translates to: GSPWCQVARHLGHRSPRRRCVFR*LWPTAP
Trigger: TGGCGCTGTTGGCCACAGCCAACGGAACACACATCG...TCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR-3UTR CCA 90 bp CGAAGCCTTCCTCGTCTTCCGCTGCCAGGTCCTCCAAGCCCGCCTCCGTCTGCAGATGGATGTAGGCAGTaGAACCGTCTTCCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: RSLPRLPLPGPPSPPPSADGCRQ*NRLPAG
Trigger: TCCAGCTGGAAGACGGTTCCACTGCCTACATCCATC...TGCAGACGGAGGCGGGCTTGGAGGACCTGGCAGCGGAAGACGAGGAAGGCTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR-3UTR CCA 90 bp GCTGACCTGCTGGGTACCGTCCTGAGTGATCAGAGCCACCTGAGGGGGCCCATCGTCACCATGGCTACTTaGGTTGGGATGGCACTGCTC +
Preference number: 2 (lower is better)
Translates to: ADLLGTVLSDQSHLRGPIVTMAT*VGMALL
Trigger: GAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGAC...GATGGGCCCCCTCAGGTGGCTCTGATCACTCAGGACGGTACCCAGCAGGTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
3UTR CAA 90 bp TGCTGCCCTTTGCCATTGTGGGAAGCAGGGCTATCGTGCAGAACCTaGCTGGCATACTGCTCCAGGGCCACCACTGTGTCCGTGCCGAAG +
Preference number: 2 (lower is better)
Translates to: CCPLPLWEAGLSCRT*LAYCSRATTVSVPK
Trigger: CTTCGGCACGGACACAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATAGCCCTGCTTCCCACAATGGCAAAGGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR-3UTR TCA 90 bp TCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTATGCGGCCAAGGCAGGGCTGCCTGTaGGCATGGAGCCTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: STRGHFPVASSPLRPMRPRQGCL*AWSLLQ
Trigger: CTGGAGAAGGCTCCATGCTCACAGGCAGCCCTGCCT...TGGCCGCATAGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR GCA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTAAGCTCAGTGTCGACTaGCTGCTGCCTGGCCCTCAT +
Preference number: 2 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPKLSVD*LLPGPH
Trigger: ATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTT...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR GCA 90 bp ACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTACAGGCCACTCGCTTaGCTCTCTGCCACAGACAAG +
Preference number: 2 (lower is better)
Translates to: TVIAGRRWAESCRPFPWWYRPLA*LSATDK
Trigger: CTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTA...CCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR GCA 90 bp CAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTACAGGCCACTCGCTTaGCTCTCTGCCACAGACAAG +
Preference number: 2 (lower is better)
Translates to: QETVIAGRRWAESCRPFPYRPLA*LSATDK
Trigger: CTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTA...GGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTTTCTCCAGTGTGGTGTaGGAGCTGGTCCTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPFSSVV*ELVLLG
Trigger: GCCCAAGAGGACCAGCTCCCACACCACACTGGAGAA...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp CCCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGCCTTCTCCAGTGTaGTGTGGGAGCTGGTCCTCT +
Preference number: 2 (lower is better)
Translates to: PSSLGTGHSLASLPQTSEEPSPV*CGSWSS
Trigger: AGAGGACCAGCTCCCACACCACACTGGAGAAGGCTC...TTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp GTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTCACATGCGGCCATCTTCTTaGGGTCAGCTGTGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: VQATRLPLCHRQAKRHLHMRPSS*GQLWLG
Trigger: CCCCAGCCACAGCTGACCCCAAGAAGATGGCCGCAT...GTGAAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp AGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCAGTCCCTGGTGCCAAGTaGCTAGGCATCTTGGCCACC +
Preference number: 2 (lower is better)
Translates to: SLGTGHSLASLPQTSEEAVPGAK*LGILAT
Trigger: GGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGAC...TGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp AGCCCCTTGCTGCATAGCAGCAGTGGCTACGCTTATGGCCTCCTCCAGGGTCTGGTGTTCCGTTGGCTGTaGCCAACAGCGCCACCTGTT +
Preference number: 2 (lower is better)
Translates to: SPLLHSSSGYAYGLLQGLVFRWL*PTAPPV
Trigger: AACAGGTGGCGCTGTTGGCCACAGCCAACGGAACAC...CAGACCCTGGAGGAGGCCATAAGCGTAGCCACTGCTGCTATGCAGCAAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR-3UTR CCA 90 bp AGCATGGAGCCTTCTCCAGTGTGGTGTGGGAGCTGGTCCTCTTGGGCTCAGCAGCAGTGGCTACGCTTATaGCCTCCTCCAGGGTCTGCT +
Preference number: 2 (lower is better)
Translates to: SMEPSPVWCGSWSSWAQQQWLRL*PPPGSA
Trigger: AGCAGACCCTGGAGGAGGCCATAAGCGTAGCCACTG...CTGCTGAGCCCAAGAGGACCAGCTCCCACACCACACTGGAGAAGGCTCCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR-3UTR TCA 90 bp AGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCATGTCTGGCAGCCTGGTaGCCAAGCTCAGTGTCGACT +
Preference number: 2 (lower is better)
Translates to: SLGTGHSLASLPQTSEEACLAAW*PSSVST
Trigger: AGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACA...TGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR GCA 90 bp AGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCAAAGCTCAGTGTCGACTaGCTGCTGCCTGGCCCTCAT +
Preference number: 2 (lower is better)
Translates to: SLGTGHSLASLPQTSEEAKLSVD*LLPGPH
Trigger: ATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTT...TGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp TTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTACTTTCTCCAGTGTGGTGTaGGAGCTGGTCCTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: LLLGGAGLKAVGLSPGGTFSSVV*ELVLLG
Trigger: GCCCAAGAGGACCAGCTCCCACACCACACTGGAGAA...AGTACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp AGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCATTCTCCAGTGTGGTGTaGGAGCTGGTCCTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: SLGTGHSLASLPQTSEEAFSSVV*ELVLLG
Trigger: GCCCAAGAGGACCAGCTCCCACACCACACTGGAGAA...TGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR TCA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTAGGCAGGGCTGCCTGTaGGCATGGAGCCTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPRQGCL*AWSLLQ
Trigger: CTGGAGAAGGCTCCATGCTCACAGGCAGCCCTGCCT...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR TCA 90 bp TCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTATGCGGCCATGTCTGGCAGCCTGGTaGCCAAGCTCAGTGTCGACT +
Preference number: 2 (lower is better)
Translates to: STRGHFPVASSPLRPMRPCLAAW*PSSVST
Trigger: AGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACA...TGGCCGCATAGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR GCA 90 bp GGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTCGCAGGAATAATATCCTaGCAAGGGAGGGACGCAGGT +
Preference number: 2 (lower is better)
Translates to: GYRPLACLSATDKRRGTFAGIIS*QGRDAG
Trigger: ACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGC...GAAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR GCA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGCAGGAATAATATCCTaGCAAGGGAGGGACGCAGGT +
Preference number: 2 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPAGIIS*QGRDAG
Trigger: ACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGC...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR GCA 90 bp AGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCATACAGGCCACTCGCTTaGCTCTCTGCCACAGACAAG +
Preference number: 2 (lower is better)
Translates to: SLGTGHSLASLPQTSEEAYRPLA*LSATDK
Trigger: CTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTA...TGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp CACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGATGCGGCCATCTTCTTaGGGTCAGCTGTGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: HHLPEEGSGQSRNNILPRMRPSS*GQLWLG
Trigger: CCCCAGCCACAGCTGACCCCAAGAAGATGGCCGCAT...CCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp AGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTATTGCTGGGAGGCGCTaGGCTGAAAGCTGTCGGCCT +
Preference number: 2 (lower is better)
Translates to: RKGVDRAGIISCQGRDAGIAGRR*AESCRP
Trigger: AGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAAT...ACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp GAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTGTCCCTGGTGCCAAGTaGCTAGGCATCTTGGCCACC +
Preference number: 2 (lower is better)
Translates to: EGSGQSRNNILPREGRRCVPGAK*LGILAT
Trigger: GGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGAC...ACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR TCA 90 bp ACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGTTGCCTCATCACCCCTaGGGCCTATGCGGCCATCTT +
Preference number: 2 (lower is better)
Translates to: TTSLRKGVDRAGIISCQGLPHHP*GLCGHL
Trigger: AAGATGGCCGCATAGGCCTCAGGGGTGATGAGGCAA...CCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR TCA 90 bp CCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCTTGCCTCATCACCCCTaGGGCCTATGCGGCCATCTT +
Preference number: 2 (lower is better)
Translates to: PGPHLGCSPQTFPLEAIFLPHHP*GLCGHL
Trigger: AAGATGGCCGCATAGGCCTCAGGGGTGATGAGGCAA...GAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR TCA 90 bp CTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGATGTCTGGCAGCCTGGTaGCCAAGCTCAGTGTCGACT +
Preference number: 2 (lower is better)
Translates to: LPEEGSGQSRNNILPREGCLAAW*PSSVST
Trigger: AGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACA...TCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR GCA 90 bp ACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAAGCTCAGTGTCGACTaGCTGCTGCCTGGCCCTCAT +
Preference number: 2 (lower is better)
Translates to: TTSLRKGVDRAGIISCQGKLSVD*LLPGPH
Trigger: ATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTT...CCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp CTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGAGAGCCTTCTCCAGTGTaGTGTGGGAGCTGGTCCTCT +
Preference number: 2 (lower is better)
Translates to: LPEEGSGQSRNNILPREGEPSPV*CGSWSS
Trigger: AGAGGACCAGCTCCCACACCACACTGGAGAAGGCTC...TCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp AGGGCTTGCAATGTGTGTGCACCACGTGGTGTTTGTACAGGCTCGAGTACTCCGCGTGCAGAACCTTGCTaGCATACTGCTCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: RACNVCAPRGVCTGSSTPRAEPC*HTAPGP
Trigger: TGGCCCTGGAGCAGTATGCCAGCAAGGTTCTGCACG...CGGAGTACTCGAGCCTGTACAAACACCACGTGGTGCACACACATTGCAAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR-3UTR TCA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTTTGCCTCATCACCCCTaGGGCCTATGCGGCCATCTT +
Preference number: 2 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPLPHHP*GLCGHL
Trigger: AAGATGGCCGCATAGGCCTCAGGGGTGATGAGGCAA...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR GCA 90 bp GACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTGGCAGCCTGCAGGAATAATATCCTaGCAAGGGAGGGACGCAGGT +
Preference number: 2 (lower is better)
Translates to: DRAGIISCQGRDAGVWQPAGIIS*QGRDAG
Trigger: ACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGC...AGGCTGCCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR GCA 90 bp AGCGAAGAGGCACCTTCACTCCAGCCACAGGCCCCTGAGGAATTAATTCTGACTGTCACAGCCCCTTGCTaGATAGCAGCAGTGGCTACG +
Preference number: 2 (lower is better)
Translates to: SEEAPSLQPQAPEELILTVTAPC*IAAVAT
Trigger: CGTAGCCACTGCTGCTATGCAGCAAGGGGCTGTGAC...AGTCAGAATTAATTCCTCAGGGGCCTGTGGCTGGAGTGAAGGTGCCTCTTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR-3UTR CCA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTGAGCCTTCTCCAGTGTaGTGTGGGAGCTGGTCCTCT +
Preference number: 2 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPEPSPV*CGSWSS
Trigger: AGAGGACCAGCTCCCACACCACACTGGAGAAGGCTC...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CCA 90 bp AGGCCTTTCCACAGCTGGGAAAGTCACACCTGTATGGGCGGTCCCCTGTGTGAGTTAAGTGATGGGCAGTaGTGTAGAGACGACCACAGC +
Preference number: 2 (lower is better)
Translates to: RPFHSWESHTCMGGPLCELSDGQ*CRDDHS
Trigger: GCTGTGGTCGTCTCTACACCACTGCCCATCACTTAA...CTCACACAGGGGACCGCCCATACAGGTGTGACTTTCCCAGCTGTGGAAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR-3UTR CCA 90 bp ACGTGGTGTTTGTACAGGCTCGAGTACTCCGTAAAGCGCTTTCCGCAGCCTGGCGCTGCACAGCTCCTCTaGGCACTTGTATGGTTTCTC +
Preference number: 2 (lower is better)
Translates to: TWCLYRLEYSVKRFPQPGAAQLL*ALVWFL
Trigger: GAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGC...GCCAGGCTGCGGAAAGCGCTTTACGGAGTACTCGAGCCTGTACAAACACCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR-3UTR GCA 90 bp CAGGCCCCTGAGGAATTAATTCTGACTGTGGTGGTGGGAAGTCCCTGGTGCCAAGCAGGAATAATATCCTaGCAAGGGAGGGACGCAGGT +
Preference number: 2 (lower is better)
Translates to: QAPEELILTVVVGSPWCQAGIIS*QGRDAG
Trigger: ACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGC...TTGGCACCAGGGACTTCCCACCACCACAGTCAGAATTAATTCCTCAGGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR GCA 90 bp ATGGTTTCTCACCCGTGTGAGTACGAACATGACTTTTTAGCCCATAGCCTGTTGACCTTGCTGGCATACTaGTCCAGGGCCACCACTGTG +
Preference number: 2 (lower is better)
Translates to: MVSHPCEYEHDFLAHSLLTLLAY*SRATTV
Trigger: CACAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGT...CAACAGGCTATGGGCTAAAAAGTCATGTTCGTACTCACACGGGTGAGAAACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR GCA 72 bp TCTTCCGCTGCCAGGTCCTCCAAGCCCGCCTCCGTCTaGACAGCCAGGATGGCGCTGTCCGACGGCACAGGC +
Preference number: 3 (lower is better)
Translates to: SSAARSSKPASV*TARMALSDGTG
Trigger: GCCTGTGCCGTCGGACAGCGCCATCCTGGCTGTGCAGACGGAGGCGGGCTTGGAGGACCTGGCAGCGGAAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR CCA 72 bp GGTCCTCCAAGCCCGCCTCCGTCTGCACAGCCAGGATaGCGCTGTCCGACGGCACAGGCACAGGGTGATGGA +
Preference number: 3 (lower is better)
Translates to: GPPSPPPSAQPG*RCPTAQAQGDG
Trigger: TCCATCACCCTGTGCCTGTGCCGTCGGACAGCGCCATCCTGGCTGTGCAGACGGAGGCGGGCTTGGAGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR GCA 72 bp CACTGTGTCCGTGCCGAAGCCTTCCTCGTCTTCCGCTaGCAGGTCCTCCAAGCCCGCCTCCGTCTGCACAGC +
Preference number: 3 (lower is better)
Translates to: HCVRAEAFLVFR*QVLQARLRLHS
Trigger: GCTGTGCAGACGGAGGCGGGCTTGGAGGACCTGGCAGCGGAAGACGAGGAAGGCTTCGGCACGGACACAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR GCA 72 bp TGCTGGCATACTGCTCCAGGGCCACCACTGTGTCCGTaGCGAAGCCTTCCTCGTCTTCCGCTGCCAGGTCCT +
Preference number: 3 (lower is better)
Translates to: CWHTAPGPPLCP*RSLPRLPLPGP
Trigger: AGGACCTGGCAGCGGAAGACGAGGAAGGCTTCGGCACGGACACAGTGGTGGCCCTGGAGCAGTATGCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR CCA 72 bp GCTGCCTGTGAGCATGGAGCCTTCTCCAGTGTGGTGTaGGAGCTGGTCCTCTTGGGCTCAGCAGCCGCTCTC +
Preference number: 3 (lower is better)
Translates to: AACEHGAFSSVV*ELVLLGSAAAL
Trigger: GAGAGCGGCTGCTGAGCCCAAGAGGACCAGCTCCCACACCACACTGGAGAAGGCTCCATGCTCACAGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR CCA 72 bp CCGACGGCACAGGCACAGGGTGATGGATGTAGGCAGTaGAACCGTCTTCCAGCTGGACAGCTTCCAGGGCGC +
Preference number: 3 (lower is better)
Translates to: PTAQAQGDGCRQ*NRLPAGQLPGR
Trigger: GCGCCCTGGAAGCTGTCCAGCTGGAAGACGGTTCCACTGCCTACATCCATCACCCTGTGCCTGTGCCGTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR-3UTR CAA 90 bp GGGACGCAGGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGTATGCGGCCATCTTCTaGGGGTCAGCTGTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: GTQVSGSLVTKLSVDCLLYAAIF*GSAVAG
Trigger: CCCAGCCACAGCTGACCCCAAGAAGATGGCCGCATA...CAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CAA 90 bp CAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGCGATGTGTGTTCCGTaGGCTGTGGCCAACAGCGCC +
Preference number: 3 (lower is better)
Translates to: QPGDQAQCRLPAAWPSSWAMCVP*AVANSA
Trigger: GGCGCTGTTGGCCACAGCCAACGGAACACACATCGC...CCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR-3UTR CAA 90 bp GGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTCAGGGTCACAGCCCCTaGCTGCATAGCAGCAGTGGC +
Preference number: 3 (lower is better)
Translates to: GSLVTKLSVDCLLPGPHLQGHSP*LHSSSG
Trigger: GCCACTGCTGCTATGCAGCAAGGGGCTGTGACCCTG...AAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR-3UTR CAA 90 bp GGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACAGGGTCACAGCCCCTaGCTGCATAGCAGCAGTGGC +
Preference number: 3 (lower is better)
Translates to: GSPWCQVARHLGHRSPRRQGHSP*LHSSSG
Trigger: GCCACTGCTGCTATGCAGCAAGGGGCTGTGACCCTG...TCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR-3UTR CAA 90 bp CCTTCTCCAGTGTGGTGTGGGAGCTGGTCCTCTTGGGCTCAGCAGCCGCTCTCTTATGCGGCCATCTTCTaGGGGTCAGCTGTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: PSPVWCGSWSSWAQQPLSYAAIF*GSAVAG
Trigger: CCCAGCCACAGCTGACCCCAAGAAGATGGCCGCATA...AGAGAGCGGCTGCTGAGCCCAAGAGGACCAGCTCCCACACCACACTGGAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR-3UTR CAA 90 bp TCCCCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGTATGCGGCCATCTTCTaGGGGTCAGCTGTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: SPAVWVQATRLPLCHRQAYAAIF*GSAVAG
Trigger: CCCAGCCACAGCTGACCCCAAGAAGATGGCCGCATA...CGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CAA 90 bp GTGAGCATGGAGCCTTCTCCAGTGTGGTGTGGGAGCTGGTCCTCTTGGGCTCAGGCGATGTGTGTTCCGTaGGCTGTGGCCAACAGCGCC +
Preference number: 3 (lower is better)
Translates to: VSMEPSPVWCGSWSSWAQAMCVP*AVANSA
Trigger: GGCGCTGTTGGCCACAGCCAACGGAACACACATCGC...CTGAGCCCAAGAGGACCAGCTCCCACACCACACTGGAGAAGGCTCCATGCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR TCA 72 bp GCCCCAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTaGAAGCTGTCGGCCTTTCCCCTGGTGGTACTAGCA +
Preference number: 3 (lower is better)
Translates to: APGDGYCWEALG*KLSAFPLVVLA
Trigger: TGCTAGTACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CAA 90 bp CAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGCAACAGCGCCACCTGTaGGTGATGAAGAGACGCCAC +
Preference number: 3 (lower is better)
Translates to: QPGDQAQCRLPAAWPSSWQQRHL*VMKRRH
Trigger: GTGGCGTCTCTTCATCACCAACAGGTGGCGCTGTTG...CCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR-3UTR CAA 90 bp AGGAGCGGCCACAGCCCTCAAAAGGGCACCGGAATGGGCGCTCACCTGTGTGGGTTAGCCCATAGCCTGTaGCAAAGGCCTTTCCACAGC +
Preference number: 3 (lower is better)
Translates to: RSGHSPQKGTGMGAHLCGLAHSL*QRPFHS
Trigger: GCTGTGGAAAGGCCTTTGCAACAGGCTATGGGCTAA...CCCACACAGGTGAGCGCCCATTCCGGTGCCCTTTTGAGGGCTGTGGCCGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR TCA 72 bp GGATGCGCACATGATTCTTGTAGTTGGTGGCGCTGGTaGAGCCACGACCACAGTGGGGCTCGGGGCAGGTGT +
Preference number: 3 (lower is better)
Translates to: GCAHDSCSWWRW*SHDHSGARGRC
Trigger: ACACCTGCCCCGAGCCCCACTGTGGTCGTGGCTTCACCAGCGCCACCAACTACAAGAATCATGTGCGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR GCA 72 bp CCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTaGCACAGACAAGCGAAGAGGCACCTTCACTCCAGC +
Preference number: 3 (lower is better)
Translates to: PAVWVQATRLPL*HRQAKRHLHSS
Trigger: GCTGGAGTGAAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR GCA 72 bp GAAGCAGGGCTATCGTGCAGAACCTTGCTGGCATACTaGTCCAGGGCCACCACTGTGTCCGTGCCGAAGCCT +
Preference number: 3 (lower is better)
Translates to: EAGLSCRTLLAY*SRATTVSVPKP
Trigger: AGGCTTCGGCACGGACACAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATAGCCCTGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR CCA 72 bp GTGAGCATGGAGCCTTCTCCAGTGTGGTGTGGGAGCTaGTCCTCTTGGGCTCAGCAGCCGCTCTCTGTGGTT +
Preference number: 3 (lower is better)
Translates to: VSMEPSPVWCGS*SSWAQQPLSVV
Trigger: AACCACAGAGAGCGGCTGCTGAGCCCAAGAGGACCAGCTCCCACACCACACTGGAGAAGGCTCCATGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR-3UTR CAA 90 bp GAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTTGGGAGCTGGTCCTCTaGGGCTCAGCAGCCGCTCTC +
Preference number: 3 (lower is better)
Translates to: EGSGQSRNNILPREGRRCWELVL*GSAAAL
Trigger: GAGAGCGGCTGCTGAGCCCAAGAGGACCAGCTCCCA...ACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR-3UTR CAA 90 bp TGGGAAAGTCACACCTGTATGGGCGGTCCCCTGTGTGAGCTCGTTCGTGGACCTCCAACCTGCTGCCCTTaGCCATTGTGGGAAGCAGGG +
Preference number: 3 (lower is better)
Translates to: WESHTCMGGPLCELVRGPPTCCP*PLWEAG
Trigger: CCCTGCTTCCCACAATGGCAAAGGGCAGCAGGTTGG...AGGTCCACGAACGAGCTCACACAGGGGACCGCCCATACAGGTGTGACTTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR TCA 72 bp GGGTCCGCACGTGTTTCTGCAGGTCCCCTGAGGTCTTaGAGGCTTTGCTGCACAGCTCCTCTGGGCACTTGT +
Preference number: 3 (lower is better)
Translates to: GSARVSAGPLRS*RLCCTAPLGTC
Trigger: ACAAGTGCCCAGAGGAGCTGTGCAGCAAAGCCTTCAAGACCTCAGGGGACCTGCAGAAACACGTGCGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR GCA 72 bp TGCCATTGTGGGAAGCAGGGCTATCGTGCAGAACCTTaGTGGCATACTGCTCCAGGGCCACCACTGTGTCCG +
Preference number: 3 (lower is better)
Translates to: CHCGKQGYRAEP*WHTAPGPPLCP
Trigger: CGGACACAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATAGCCCTGCTTCCCACAATGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR CCA 72 bp CCTCCAGCTGCACTGCGATGTGTGTTCCGTTGGCTGTaGCCAACAGCGCCACCTGTTGGTGATGAAGAGACG +
Preference number: 3 (lower is better)
Translates to: PPAALRCVFRWL*PTAPPVGDEET
Trigger: CGTCTCTTCATCACCAACAGGTGGCGCTGTTGGCCACAGCCAACGGAACACACATCGCAGTGCAGCTGGAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR CCA 72 bp CATTGTGGGAAGCAGGGCTATCGTGCAGAACCTTGCTaGCATACTGCTCCAGGGCCACCACTGTGTCCGTGC +
Preference number: 3 (lower is better)
Translates to: HCGKQGYRAEPC*HTAPGPPLCPC
Trigger: GCACGGACACAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATAGCCCTGCTTCCCACAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR-3UTR CAA 90 bp GACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTGGCAGCCTTATGCGGCCATCTTCTaGGGGTCAGCTGTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: DRAGIISCQGRDAGVWQPYAAIF*GSAVAG
Trigger: CCCAGCCACAGCTGACCCCAAGAAGATGGCCGCATA...AGGCTGCCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CAA 90 bp CCTGTGTGGGTCCGCACGTGTTTCTGCAGGTCCCCTGAGGTCTTGAAGGCTTTGTGCTGCCCTTTGCCATaGTGGGAAGCAGGGCTATCG +
Preference number: 3 (lower is better)
Translates to: PVWVRTCFCRSPEVLKALCCPLP*WEAGLS
Trigger: CGATAGCCCTGCTTCCCACAATGGCAAAGGGCAGCA...CAAAGCCTTCAAGACCTCAGGGGACCTGCAGAAACACGTGCGGACCCACACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR-3UTR CAA 90 bp GGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCCTGTATGCGGCCATCTTCTaGGGGTCAGCTGTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: GPHLGCSPQTFPLEAIFLYAAIF*GSAVAG
Trigger: CCCAGCCACAGCTGACCCCAAGAAGATGGCCGCATA...CAGGAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR-3UTR CAA 90 bp CCTGTGTGGGTCCGCACGTGTTTCTGCAGGTCCCCTGAGGTCTTGAAGGCTTTGAGCTCCTCTGGGCACTaGTATGGTTTCTCACCCGTG +
Preference number: 3 (lower is better)
Translates to: PVWVRTCFCRSPEVLKALSSSGH*YGFSPV
Trigger: CACGGGTGAGAAACCATACAAGTGCCCAGAGGAGCT...CAAAGCCTTCAAGACCTCAGGGGACCTGCAGAAACACGTGCGGACCCACACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR-3UTR CAA 90 bp GAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCAACAGCGCCACCTGTaGGTGATGAAGAGACGCCAC +
Preference number: 3 (lower is better)
Translates to: EGSGQSRNNILPREGRRCQQRHL*VMKRRH
Trigger: GTGGCGTCTCTTCATCACCAACAGGTGGCGCTGTTG...ACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR TCA 72 bp CAGCGCCACCTGTTGGTGATGAAGAGACGCCACGCTTaGGTCCTCAGTCACCAAGGCCCCAGAGGTAATGAT +
Preference number: 3 (lower is better)
Translates to: QRHLLVMKRRHA*VLSHQGPRGND
Trigger: ATCATTACCTCTGGGGCCTTGGTGACTGAGGACTCAAGCGTGGCGTCTCTTCATCACCAACAGGTGGCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
3UTR GCA 72 bp GAATTAATTCTGACTGTGGTGGTGGGAAGTCCCTGGTaGCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCC +
Preference number: 3 (lower is better)
Translates to: ELILTVVVGSPW*QVARHLGHRSP
Trigger: GGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCACCACAGTCAGAATTAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR CCA 72 bp AAAGGCCTTTCCACAGCTGGGAAAGTCACACCTGTATaGGCGGTCCCCTGTGTGAGCTCGTTCGTGGACCTT +
Preference number: 3 (lower is better)
Translates to: KGLSTAGKVTPV*AVPCVSSFVDL
Trigger: AAGGTCCACGAACGAGCTCACACAGGGGACCGCCCATACAGGTGTGACTTTCCCAGCTGTGGAAAGGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
3UTR TCA 72 bp AAGCGAAGAGGCACCTTCACTCCAGCCACAGGCCCCTaGGGAATTAATTCTGACTGTGGTGGTGGGAAGTCC +
Preference number: 3 (lower is better)
Translates to: KRRGTFTPATGP*GINSDCGGGKS
Trigger: GGACTTCCCACCACCACAGTCAGAATTAATTCCTCAGGGGCCTGTGGCTGGAGTGAAGGTGCCTCTTCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR CCA 72 bp GAGGAATTAATTCTGACTGTGGTGGTGGGAAGTCCCTaGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGC +
Preference number: 3 (lower is better)
Translates to: EELILTVVVGSP*CQVARHLGHRS
Trigger: GCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCACCACAGTCAGAATTAATTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
3UTR CCA 72 bp AACCACAAAACAAATGAAACCCAGTCCCCAGCAGTCTaGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGA +
Preference number: 3 (lower is better)
Translates to: NHKTNETQSPAV*VQATRLPLCHR
Trigger: TCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGGGACTGGGTTTCATTTGTTTTGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCGCTCCCCGTGTGCGCTaGGCTTGTGCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GVWQPGDQAQCRLPAAWPAPRVR*ACAWPG
Trigger: CCCTGGCCATGCACAAGCGCAGCGCACACGGGGAGC...GGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCGAGGCGGCCTCCAGCTaGTGCTGCTCATACAGGGCC +
Preference number: 4 (lower is better)
Translates to: GVWQPGDQAQCRLPAAWPEAASS*CCSYRA
Trigger: GGCCCTGTATGAGCAGCAGCAGCTGGAGGCCGCCTC...GGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CAGAGCCACCTGAGGGGGCCCATCCTCCTCCGTCACCATGGCTACTTGGGTTGGGCTCGCTCTCCTCCGTaGCCTCCAGCTCCCCGTGTG +
Preference number: 4 (lower is better)
Translates to: QSHLRGPILLRHHGYLGWARSPP*PPAPRV
Trigger: CACACGGGGAGCTGGAGGCCACGGAGGAGAGCGAGC...CCAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGCCCCCTCAGGTGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR GCA 90 bp GCTACGCTTATGGCCTCCTCCAGGGTCTGCTGGTCCTCCAGCTGCACTGCGATGGCTCCCCGTGTGCGCTaGGCTTGTGCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ATLMASSRVCWSSSCTAMAPRVR*ACAWPG
Trigger: CCCTGGCCATGCACAAGCGCAGCGCACACGGGGAGC...CATCGCAGTGCAGCTGGAGGACCAGCAGACCCTGGAGGAGGCCATAAGCGTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129522.4
CDS-3UTR GCA 90 bp CAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCGCTCCCCGTGTGCGCTaGGCTTGTGCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QETVIAGRRWAESCRPFPAPRVR*ACAWPG
Trigger: CCCTGGCCATGCACAAGCGCAGCGCACACGGGGAGC...GGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGGACGCAGGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCTCCAGCTCCCCGTGTaGGCTGCGCTTGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: GTQVSGSLVTKLSVDCLLLQLPV*AALVHG
Trigger: GCCATGCACAAGCGCAGCGCACACGGGGAGCTGGAG...CAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGGATGGTGAGGGTGGTGCTGCCGTGCTGTGTCACCACACTGATGGCACTCCCCCTCCAGCTCCCCGTGTaGGCTGCGCTTGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: GMVRVVLPCCVTTLMALPLQLPV*AALVHG
Trigger: GCCATGCACAAGCGCAGCGCACACGGGGAGCTGGAG...GGGGAGTGCCATCAGTGTGGTGACACAGCACGGCAGCACCACCCTCACCATCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR GCA 90 bp GTGGTGGGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCCTCCAGCTCCCCGTGTaGGCTGCGCTTGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: VVGSPWCQVARHLGHRSPLQLPV*AALVHG
Trigger: GCCATGCACAAGCGCAGCGCACACGGGGAGCTGGAG...GGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CTGGGTACCGTCCTGAGTGATCAGAGCCACCTGAGGGGGCCCATCCTCCTCCGTGCGGCCTCCAGCTGCTaGTGCTCATACAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LGTVLSDQSHLRGPILLRAASSC*CSYRAC
Trigger: GCAGGCCCTGTATGAGCAGCAGCAGCTGGAGGCCGC...ACGGAGGAGGATGGGCCCCCTCAGGTGGCTCTGATCACTCAGGACGGTACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR GCA 90 bp GGAGCCTTCTCCAGTGTGGTGTGGGAGCTGGTCCTCTTGGGCTCAGCAGCCGCTGAGGCGGCCTCCAGCTaGTGCTGCTCATACAGGGCC +
Preference number: 4 (lower is better)
Translates to: GAFSSVVWELVLLGSAAAEAASS*CCSYRA
Trigger: GGCCCTGTATGAGCAGCAGCAGCTGGAGGCCGCCTC...AGCGGCTGCTGAGCCCAAGAGGACCAGCTCCCACACCACACTGGAGAAGGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129522.4
CDS-3UTR GCA 90 bp GTGGTGGGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCGCACTCCCCAGGGCCTaGAGGTCTTCTGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: VVGSPWCQVARHLGHRSPALPRA*RSSGDR
Trigger: CCTGTCCCCAGAAGACCTGCAGGCCCTGGGGAGTGC...GGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR CCA 90 bp GGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCCGCTGCGCTTGTGCATaGCCAGGGTGGAGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: GVWQPGDQAQCRLPAAWPRCACA*PGWRFA
Trigger: GGCAAACCTCCACCCTGGCCATGCACAAGCGCAGCG...GGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp GCTGACCTGCTGGGTACCGTCCTGAGTGATCAGAGCCACCTGAGGGGGCCCATCAGTTGGTGGCGCTGGTaGAGCCACGACCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: ADLLGTVLSDQSHLRGPISWWRW*SHDHSG
Trigger: CCCACTGTGGTCGTGGCTTCACCAGCGCCACCAACT...GATGGGCCCCCTCAGGTGGCTCTGATCACTCAGGACGGTACCCAGCAGGTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR TCA 90 bp GGGACGCAGGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGGGGTACCGTCCTGAGTaGTCAGAGCCACCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GTQVSGSLVTKLSVDCLLGYRPE*SEPPEG
Trigger: CCCCTCAGGTGGCTCTGATCACTCAGGACGGTACCC...CAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp TGGTGTGGGAGCTGGTCCTCTTGGGCTCAGCAGCCGCTCTCTGTGGTTTCCAGGGATGACCGGGGATGGTaGGGGTGGTGCTGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: WCGSWSSWAQQPLSVVSRDDRGW*GWCCRA
Trigger: AGCACGGCAGCACCACCCTCACCATCCCCGGTCATC...CCTGGAAACCACAGAGAGCGGCTGCTGAGCCCAAGAGGACCAGCTCCCACACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
CDS-3UTR GCA 90 bp CAGGTCCTCCAAGCCCGCCTCCGTCTGCACAGCCAGGATGGCGCTGTCCGACGGGGTGTATGTAGGCCATaGTGCCGTCTTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QVLQARLRLHSQDGAVRRGVCRP*CRLPAA
Trigger: TGCAGCTGGAAGACGGCAGCATGGCCTACATACACC...CCGTCGGACAGCGCCATCCTGGCTGTGCAGACGGAGGCGGGCTTGGAGGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
CDS-3UTR GCA 90 bp GGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCGCTCGCCTGTGTGGGTaGGCACATGTACCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: GVWQPGDQAQCRLPAAWPARLCG*AHVPCG
Trigger: TCCGCAAGGTACATGTGCGCACCCACACAGGCGAGC...GGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp TTCTGGGGACAGGCTGACCTGCTGGGTACCGTCCTGAGTGATCAGAGCCACCTGGCTCCCCGTGTGCGCTaGGCTTGTGCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FWGQADLLGTVLSDQSHLAPRVR*ACAWPG
Trigger: CCCTGGCCATGCACAAGCGCAGCGCACACGGGGAGC...CAGGTGGCTCTGATCACTCAGGACGGTACCCAGCAGGTCAGCCTGTCCCCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR GCA 90 bp CGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTCTCCAGCTCCCCGTGTaGGCTGCGCTTGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: RLLLGGAGLKAVGLSPGGLQLPV*AALVHG
Trigger: GCCATGCACAAGCGCAGCGCACACGGGGAGCTGGAG...ACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp TCCCCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGCTCCAGCTCCCCGTGTaGGCTGCGCTTGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: SPAVWVQATRLPLCHRQALQLPV*AALVHG
Trigger: GCCATGCACAAGCGCAGCGCACACGGGGAGCTGGAG...CGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGAGCGGCCTCCAGCTGCTaGTGCTCATACAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GSPWCQVARHLGHRSPRRAASSC*CSYRAC
Trigger: GCAGGCCCTGTATGAGCAGCAGCAGCTGGAGGCCGC...TCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCGCGGCCTCCAGCTGCTaGTGCTCATACAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QETVIAGRRWAESCRPFPAASSC*CSYRAC
Trigger: GCAGGCCCTGTATGAGCAGCAGCAGCTGGAGGCCGC...GGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCGAGGCGGCCTCCAGCTaGTGCTGCTCATACAGGGCC +
Preference number: 4 (lower is better)
Translates to: QETVIAGRRWAESCRPFPEAASS*CCSYRA
Trigger: GGCCCTGTATGAGCAGCAGCAGCTGGAGGCCGCCTC...GGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGAGAGGCGGCCTCCAGCTaGTGCTGCTCATACAGGGCC +
Preference number: 4 (lower is better)
Translates to: GSPWCQVARHLGHRSPRREAASS*CCSYRA
Trigger: GGCCCTGTATGAGCAGCAGCAGCTGGAGGCCGCCTC...TCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CCCCAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCGCACTCCCCAGGGCCTaGAGGTCTTCTGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PQETVIAGRRWAESCRPFALPRA*RSSGDR
Trigger: CCTGTCCCCAGAAGACCTGCAGGCCCTGGGGAGTGC...GAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR CCA 90 bp GGGACGCAGGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCAGCTTCCAGGGCGCTaGGGTCACAGCCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GTQVSGSLVTKLSVDCLLQLPGR*GHSPLW
Trigger: CCAAAGAGGGCTGTGACCCCAGCGCCCTGGAAGCTG...CAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GGGACGCAGGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGGGCCGCTCGCCTGTGTaGGTGCGCACATGTACCTTG +
Preference number: 4 (lower is better)
Translates to: GTQVSGSLVTKLSVDCLLGRSPV*VRTCTL
Trigger: CAAGGTACATGTGCGCACCCACACAGGCGAGCGGCC...CAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CTGGGTACCGTCCTGAGTGATCAGAGCCACCTGAGGGGGCCCATCCTCCTCCGTGGCCGCTCGCCTGTGTaGGTGCGCACATGTACCTTG +
Preference number: 4 (lower is better)
Translates to: LGTVLSDQSHLRGPILLRGRSPV*VRTCTL
Trigger: CAAGGTACATGTGCGCACCCACACAGGCGAGCGGCC...ACGGAGGAGGATGGGCCCCCTCAGGTGGCTCTGATCACTCAGGACGGTACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR CCA 90 bp GTCCTGAGTGATCAGAGCCACCTGAGGGGGCCCATCCTCCTCCGTCACCATGGCCGCTGCGCTTGTGCATaGCCAGGGTGGAGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: VLSDQSHLRGPILLRHHGRCACA*PGWRFA
Trigger: GGCAAACCTCCACCCTGGCCATGCACAAGCGCAGCG...GCCATGGTGACGGAGGAGGATGGGCCCCCTCAGGTGGCTCTGATCACTCAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR CCA 90 bp AGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGAGCTCGCTCTCCTCCGTaGCCTCCAGCTCCCCGTGTG +
Preference number: 4 (lower is better)
Translates to: SSVSTACCLALILGVAHRARSPP*PPAPRV
Trigger: CACACGGGGAGCTGGAGGCCACGGAGGAGAGCGAGC...TCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp ACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCAGCTCGCTCTCCTCCGTaGCCTCCAGCTCCCCGTGTG +
Preference number: 4 (lower is better)
Translates to: TKLSVDCLLPGPHLGCSPARSPP*PPAPRV
Trigger: CACACGGGGAGCTGGAGGCCACGGAGGAGAGCGAGC...TGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGCTCGCTCTCCTCCGTaGCCTCCAGCTCCCCGTGTG +
Preference number: 4 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPARSPP*PPAPRV
Trigger: CACACGGGGAGCTGGAGGCCACGGAGGAGAGCGAGC...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp CTTCCTCGTCTTCCGCTGCCAGGTCCTCCAAGCCCGCCTCCGTCTGCACAGCCACTGTTGTCCCATCACTaGGCCTCACCGTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPRLPLPGPPSPPPSAQPLLSHH*ASPFAA
Trigger: GGCTGCAAACGGTGAGGCTCAGTGATGGGACAACAG...TGGCTGTGCAGACGGAGGCGGGCTTGGAGGACCTGGCAGCGGAAGACGAGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
CDS-3UTR TCA 90 bp ACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGGGGTACCGTCCTGAGTaGTCAGAGCCACCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: TVIAGRRWAESCRPFPWWGYRPE*SEPPEG
Trigger: CCCCTCAGGTGGCTCTGATCACTCAGGACGGTACCC...CCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp CCTCCAGCTGCACTGCGATGTGTGTTCCGTTGGCTGTGGCCAACAGCGCCACCTCTTCTGGGGACAGGCTaGCCTGCTGGGTACCGTCCT +
Preference number: 4 (lower is better)
Translates to: PPAALRCVFRWLWPTAPPLLGTG*PAGYRP
Trigger: AGGACGGTACCCAGCAGGTCAGCCTGTCCCCAGAAG...AGGTGGCGCTGTTGGCCACAGCCAACGGAACACACATCGCAGTGCAGCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129522.4
CDS-3UTR TCA 90 bp AGCTGGTCCTCTTGGGCTCAGCAGCCGCTCTCTGTGGTTTCCAGGGTCACAGCCGCTGTGTCACCACACTaGTGGCACTCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SWSSWAQQPLSVVSRVTAAVSPH*WHSPGP
Trigger: AGGCCCTGGGGAGTGCCATCAGTGTGGTGACACAGC...GGCTGTGACCCTGGAAACCACAGAGAGCGGCTGCTGAGCCCAAGAGGACCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
CDS-3UTR TCA 90 bp AGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGAGATGACCGGGGATGGTaGGGGTGGTGCTGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: SSVSTACCLALILGVAHRDDRGW*GWCCRA
Trigger: AGCACGGCAGCACCACCCTCACCATCCCCGGTCATC...TCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR TCA 90 bp GCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGGATGACCGGGGATGGTaGGGGTGGTGCTGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: AVWVQATRLPLCHRQAKRDDRGW*GWCCRA
Trigger: AGCACGGCAGCACCACCCTCACCATCCCCGGTCATC...CCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR TCA 90 bp ACGCTTATGGCCTCCTCCAGGGTCTGCTGGTCCTCCAGCTGCACTGCGATGTGTGATGACCGGGGATGGTaGGGGTGGTGCTGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: TLMASSRVCWSSSCTAMCDDRGW*GWCCRA
Trigger: AGCACGGCAGCACCACCCTCACCATCCCCGGTCATC...ACACATCGCAGTGCAGCTGGAGGACCAGCAGACCCTGGAGGAGGCCATAAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
CDS-3UTR GCA 90 bp CAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGTTCCTCGTCTTCCGCTaGCAGGTCCTCCAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: QPGDQAQCRLPAAWPSSWFLVFR*QVLQAR
Trigger: GCGGGCTTGGAGGACCTGGCAGCGGAAGACGAGGAA...CCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GACCTGCTGGGTACCGTCCTGAGTGATCAGAGCCACCTGAGGGGGCCCATCCTCGCTCGCCTGTGTGGGTaGGCACATGTACCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: DLLGTVLSDQSHLRGPILARLCG*AHVPCG
Trigger: TCCGCAAGGTACATGTGCGCACCCACACAGGCGAGC...GAGGATGGGCCCCCTCAGGTGGCTCTGATCACTCAGGACGGTACCCAGCAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR GCA 90 bp GACCTGCTGGGTACCGTCCTGAGTGATCAGAGCCACCTGAGGGGGCCCATCCTCCGCAGCCTGGCACCGTaGAAACGTATGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: DLLGTVLSDQSHLRGPILRSLAP*KRMASP
Trigger: GGGAGAAGCCATACGTTTGCACGGTGCCAGGCTGCG...GAGGATGGGCCCCCTCAGGTGGCTCTGATCACTCAGGACGGTACCCAGCAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR GCA 90 bp GGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGAGCCTCCAGCTGCTGCTaGTCATACAGGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GSPWCQVARHLGHRSPRRASSCC*SYRACS
Trigger: CGAGCAGGCCCTGTATGAGCAGCAGCAGCTGGAGGC...TCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp TCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACGAGGCGGCCTCCAGCTaGTGCTGCTCATACAGGGCC +
Preference number: 4 (lower is better)
Translates to: STACCLALILGVAHRPFHEAASS*CCSYRA
Trigger: GGCCCTGTATGAGCAGCAGCAGCTGGAGGCCGCCTC...GTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCAGGGTGGTGCTGCCGTaGTGTGTCACCACACTGATG +
Preference number: 4 (lower is better)
Translates to: GVWQPGDQAQCRLPAAWPRVVLP*CVTTLM
Trigger: CATCAGTGTGGTGACACAGCACGGCAGCACCACCCT...GGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR CCA 90 bp GGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACAGCTTCCAGGGCGCTaGGGTCACAGCCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GSPWCQVARHLGHRSPRRQLPGR*GHSPLW
Trigger: CCAAAGAGGGCTGTGACCCCAGCGCCCTGGAAGCTG...TCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTGAACCGTCTTCCAGCTaGACAGCTTCCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: VSGSLVTKLSVDCLLPGPEPSSS*TASRAL
Trigger: CAGCGCCCTGGAAGCTGTCCAGCTGGAAGACGGTTC...AGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTGGCCGCTCGCCTGTGTaGGTGCGCACATGTACCTTG +
Preference number: 4 (lower is better)
Translates to: RLLLGGAGLKAVGLSPGGGRSPV*VRTCTL
Trigger: CAAGGTACATGTGCGCACCCACACAGGCGAGCGGCC...ACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGGTGCGCTTTCCGCAGCCTaGCACCGTGCAAACGTATGG +
Preference number: 4 (lower is better)
Translates to: VPGAKWLGILATVAPGDGALSAA*HRANVW
Trigger: CCATACGTTTGCACGGTGCCAGGCTGCGGAAAGCGC...ACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTCGCTGCGCTTGTGCATaGCCAGGGTGGAGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: RLLLGGAGLKAVGLSPGGRCACA*PGWRFA
Trigger: GGCAAACCTCCACCCTGGCCATGCACAAGCGCAGCG...ACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GCTGACCTGCTGGGTACCGTCCTGAGTGATCAGAGCCACCTGAGGGGGCCCATCCTCCCCTGGGGACACTaGGCTGTATGGATGCGCACA +
Preference number: 4 (lower is better)
Translates to: ADLLGTVLSDQSHLRGPILPWGH*AVWMRT
Trigger: TGTGCGCATCCATACAGCCCAGTGTCCCCAGGGGAG...GATGGGCCCCCTCAGGTGGCTCTGATCACTCAGGACGGTACCCAGCAGGTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR CCA 90 bp AGGGTGGTGCTGCCGTGCTGTGTCACCACACTGATGGCACTCCCCAGGGCCTGCGTATGGCTTCTCCCCTaGGGACACTGGGCTGTATGG +
Preference number: 4 (lower is better)
Translates to: RVVLPCCVTTLMALPRACVWLLP*GHWAVW
Trigger: CCATACAGCCCAGTGTCCCCAGGGGAGAAGCCATAC...GCAGGCCCTGGGGAGTGCCATCAGTGTGGTGACACAGCACGGCAGCACCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR TCA 90 bp GGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTGTATCGTCACCTGGTaGATGTACGCAGTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: GVWQPGDQAQCRLPAAWPCIVTW*MYAVVP
Trigger: CGGGACCACTGCGTACATTCACCAGGTGACGATACA...GGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp TCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACAGTTGGTGGCGCTGGTaGAGCCACGACCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: STACCLALILGVAHRPFHSWWRW*SHDHSG
Trigger: CCCACTGTGGTCGTGGCTTCACCAGCGCCACCAACT...GTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp CTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGTTGGTGGCGCTGGTaGAGCCACGACCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: LVTKLSVDCLLPGPHLGCSWWRW*SHDHSG
Trigger: CCCACTGTGGTCGTGGCTTCACCAGCGCCACCAACT...ACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp GGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTCGCTGTGTCACCACACTaGTGGCACTCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GYRPLACLSATDKRRGTFAVSPH*WHSPGP
Trigger: AGGCCCTGGGGAGTGCCATCAGTGTGGTGACACAGC...GAAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR GCA 90 bp GCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGTTCCTCGTCTTCCGCTaGCAGGTCCTCCAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: AVWVQATRLPLCHRQAKRFLVFR*QVLQAR
Trigger: GCGGGCTTGGAGGACCTGGCAGCGGAAGACGAGGAA...CCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGGACGCAGGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCAACCTGCTGCCCTTTaGCATTGTGGGAAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GTQVSGSLVTKLSVDCLLQPAAL*HCGKQG
Trigger: GCCCTGCTTCCCACAATGGCAAAGGGCAGCAGGTTG...CAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp ACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGGCTCGCCTGTGTGGGTaGGCACATGTACCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: TVIAGRRWAESCRPFPWWARLCG*AHVPCG
Trigger: TCCGCAAGGTACATGTGCGCACCCACACAGGCGAGC...CCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGGTTACGCAGCCTGGCACCGTaGAAACGTATGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PWCQVARHLGHRSPRRRLRSLAP*KRMASP
Trigger: GGGAGAAGCCATACGTTTGCACGGTGCCAGGCTGCG...TAACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTTGTGCGCTGCGCTTGTaGATGGCCAGGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RLLLGGAGLKAVGLSPGGCALRL*MARVEV
Trigger: AACCTCCACCCTGGCCATGCACAAGCGCAGCGCACA...ACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp TCAGAGCCACCTGAGGGGGCCCATCCTCCTCCGTCACCATGGCTACTTGGGTTGTGTGCGCTGCGCTTGTaGATGGCCAGGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SEPPEGAHPPPSPWLLGLCALRL*MARVEV
Trigger: AACCTCCACCCTGGCCATGCACAAGCGCAGCGCACA...CAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGCCCCCTCAGGTGGCTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR GCA 90 bp CCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGGTTATGTGCGCTGCGCTTGTaGATGGCCAGGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PWCQVARHLGHRSPRRRLCALRL*MARVEV
Trigger: AACCTCCACCCTGGCCATGCACAAGCGCAGCGCACA...TAACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CCTCGTCCACCTAGTCACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATCTCCAGCTCCCCGTGTaGGCTGCGCTTGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: PRPPSHHLPEEGSGQSRNLQLPV*AALVHG
Trigger: GCCATGCACAAGCGCAGCGCACACGGGGAGCTGGAG...ATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGTGACTAGGTGGACGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp TCCAGGGTCTGCTGGTCCTCCAGCTGCACTGCGATGTGTGTTCCGTTGGCTGTGGCCTCCAGCTGCTGCTaGTCATACAGGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SRVCWSSSCTAMCVPLAVASSCC*SYRACS
Trigger: CGAGCAGGCCCTGTATGAGCAGCAGCAGCTGGAGGC...CACAGCCAACGGAACACACATCGCAGTGCAGCTGGAGGACCAGCAGACCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129522.4
CDS-3UTR GCA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGCCTCCAGCTGCTGCTaGTCATACAGGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPASSCC*SYRACS
Trigger: CGAGCAGGCCCTGTATGAGCAGCAGCAGCTGGAGGC...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CTTATGGCCTCCTCCAGGGTCTGCTGGTCCTCCAGCTGCACTGCGATGTGTGTTGCGGCCTCCAGCTGCTaGTGCTCATACAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LMASSRVCWSSSCTAMCVAASSC*CSYRAC
Trigger: GCAGGCCCTGTATGAGCAGCAGCAGCTGGAGGCCGC...AACACACATCGCAGTGCAGCTGGAGGACCAGCAGACCCTGGAGGAGGCCATAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129522.4
CDS-3UTR GCA 90 bp TGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTGCGGCCTCCAGCTGCTaGTGCTCATACAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: WVQATRLPLCHRQAKRHLAASSC*CSYRAC
Trigger: GCAGGCCCTGTATGAGCAGCAGCAGCTGGAGGCCGC...AAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CTGAGTCTGCGTGCCATCAGCGCTGACCATGGTGACCGTGTGTGTGCCAGATGTGAGGCGGCCTCCAGCTaGTGCTGCTCATACAGGGCC +
Preference number: 4 (lower is better)
Translates to: LSLRAISADHGDRVCARCEAASS*CCSYRA
Trigger: GGCCCTGTATGAGCAGCAGCAGCTGGAGGCCGCCTC...ACATCTGGCACACACACGGTCACCATGGTCAGCGCTGATGGCACGCAGACTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR GCA 90 bp CCTCGTCCACCTAGTCACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATGCACTCCCCAGGGCCTaGAGGTCTTCTGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PRPPSHHLPEEGSGQSRNALPRA*RSSGDR
Trigger: CCTGTCCCCAGAAGACCTGCAGGCCCTGGGGAGTGC...ATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGTGACTAGGTGGACGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR CCA 90 bp AGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACAGCTTCCAGGGCGCTaGGGTCACAGCCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SSVSTACCLALILGVAHRQLPGR*GHSPLW
Trigger: CCAAAGAGGGCTGTGACCCCAGCGCCCTGGAAGCTG...TCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTGAACCGTCTTCCAGCTaGACAGCTTCCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RLLLGGAGLKAVGLSPGGEPSSS*TASRAL
Trigger: CAGCGCCCTGGAAGCTGTCCAGCTGGAAGACGGTTC...ACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTGGCCGCTCGCCTGTGTaGGTGCGCACATGTACCTTG +
Preference number: 4 (lower is better)
Translates to: LVTKLSVDCLLPGPHLGCGRSPV*VRTCTL
Trigger: CAAGGTACATGTGCGCACCCACACAGGCGAGCGGCC...ACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp TCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACGGCCGCTCGCCTGTGTaGGTGCGCACATGTACCTTG +
Preference number: 4 (lower is better)
Translates to: STACCLALILGVAHRPFHGRSPV*VRTCTL
Trigger: CAAGGTACATGTGCGCACCCACACAGGCGAGCGGCC...GTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTGTGTTCCGTTGGCTGTaGCCAACAGCGCCACCTGTT +
Preference number: 4 (lower is better)
Translates to: VSGSLVTKLSVDCLLPGPVFRWL*PTAPPV
Trigger: AACAGGTGGCGCTGTTGGCCACAGCCAACGGAACAC...AGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GTGGTGGGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCCGATGTGTGTTCCGTTaGCTGTGGCCAACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: VVGSPWCQVARHLGHRSPRCVFR*LWPTAP
Trigger: TGGCGCTGTTGGCCACAGCCAACGGAACACACATCG...GGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GTGGTGGGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCCAGTGGCTACGCTTATaGCCTCCTCCAGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VVGSPWCQVARHLGHRSPQWLRL*PPPGSA
Trigger: AGCAGACCCTGGAGGAGGCCATAAGCGTAGCCACTG...GGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGGTCAGTGGCTACGCTTATaGCCTCCTCCAGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VPGAKWLGILATVAPGDGQWLRL*PPPGSA
Trigger: AGCAGACCCTGGAGGAGGCCATAAGCGTAGCCACTG...ACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
3UTR CAA 72 bp GGAGCCTTCTCCAGTGTGGTGTGGGAGCTGGTCCTCTaGGGCTCAGCAGCCGCTCTCTGTGGTTTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GAFSSVVWELVL*GSAAALCGFQG
Trigger: ACCCTGGAAACCACAGAGAGCGGCTGCTGAGCCCAAGAGGACCAGCTCCCACACCACACTGGAGAAGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129522.4
ENSMUST00000233841.2
CDS-3UTR TCA 90 bp CAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCCTGTTGTCCCATCACTaGGCCTCACCGTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: QETVIAGRRWAESCRPFPLLSHH*ASPFAA
Trigger: GGCTGCAAACGGTGAGGCTCAGTGATGGGACAACAG...GGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp CCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGGTTACTGTTGTCCCATCACTaGGCCTCACCGTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PWCQVARHLGHRSPRRRLLLSHH*ASPFAA
Trigger: GGCTGCAAACGGTGAGGCTCAGTGATGGGACAACAG...TAACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp GGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGTCCCCTGAGGTCTTaGAGGCTTTGCTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: GSLVTKLSVDCLLPGPHLGPLRS*RLCCTA
Trigger: AGCTGTGCAGCAAAGCCTTCAAGACCTCAGGGGACC...AAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp GATGGTGAGGGTGGTGCTGCCGTGCTGTGTCACCACACTGATGGCACTCCCCAGGGTCCCCTGAGGTCTTaGAGGCTTTGCTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: DGEGGAAVLCHHTDGTPQGPLRS*RLCCTA
Trigger: AGCTGTGCAGCAAAGCCTTCAAGACCTCAGGGGACC...CTGGGGAGTGCCATCAGTGTGGTGACACAGCACGGCAGCACCACCCTCACCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR TCA 90 bp ACGCAGGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGTCCCCTGAGGTCTTaGAGGCTTTGCTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: TQVSGSLVTKLSVDCLLPGPLRS*RLCCTA
Trigger: AGCTGTGCAGCAAAGCCTTCAAGACCTCAGGGGACC...AGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp GTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTCACAGTTGGTGGCGCTGGTaGAGCCACGACCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: VQATRLPLCHRQAKRHLHSWWRW*SHDHSG
Trigger: CCCACTGTGGTCGTGGCTTCACCAGCGCCACCAACT...GTGAAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp CCTCGTCCACCTAGTCACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAGTTGGTGGCGCTGGTaGAGCCACGACCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: PRPPSHHLPEEGSGQSRNSWWRW*SHDHSG
Trigger: CCCACTGTGGTCGTGGCTTCACCAGCGCCACCAACT...ATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGTGACTAGGTGGACGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp AGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCAGGGTACCGTCCTGAGTaGTCAGAGCCACCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLGTGHSLASLPQTSEEAGYRPE*SEPPEG
Trigger: CCCCTCAGGTGGCTCTGATCACTCAGGACGGTACCC...TGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp TGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTGCTGTGTCACCACACTaGTGGCACTCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: WVQATRLPLCHRQAKRHLAVSPH*WHSPGP
Trigger: AGGCCCTGGGGAGTGCCATCAGTGTGGTGACACAGC...AAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR GCA 90 bp GTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTGGTGTATGTAGGCCATaGTGCCGTCTTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VSGSLVTKLSVDCLLPGPGVCRP*CRLPAA
Trigger: TGCAGCTGGAAGACGGCAGCATGGCCTACATACACC...AGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CCCAGAGGTAATGATTGTGACGGGCTGAGTCTGCGTGCCATCAGCGCTGACCATAAGCCCGCCTCCGTCTaGACAGCCAGGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PRGNDCDGLSLRAISADHKPASV*TARMAL
Trigger: CAGCGCCATCCTGGCTGTGCAGACGGAGGCGGGCTT...ATGGTCAGCGCTGATGGCACGCAGACTCAGCCCGTCACAATCATTACCTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233841.2
CDS-3UTR GCA 90 bp AGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCATTCCTCGTCTTCCGCTaGCAGGTCCTCCAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: SLGTGHSLASLPQTSEEAFLVFR*QVLQAR
Trigger: GCGGGCTTGGAGGACCTGGCAGCGGAAGACGAGGAA...TGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTCAACCTGCTGCCCTTTaGCATTGTGGGAAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GSLVTKLSVDCLLPGPHLQPAAL*HCGKQG
Trigger: GCCCTGCTTCCCACAATGGCAAAGGGCAGCAGGTTG...AAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGAGTCCGCACGTGTTTCTaGAGGTCCCCTGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GSPWCQVARHLGHRSPRRVRTCF*RSPEVL
Trigger: CAAGACCTCAGGGGACCTGCAGAAACACGTGCGGAC...TCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTCCGCACGTGTTTCTaGAGGTCCCCTGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: QPGDQAQCRLPAAWPSSWVRTCF*RSPEVL
Trigger: CAAGACCTCAGGGGACCTGCAGAAACACGTGCGGAC...CCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGTCCGCACGTGTTTCTaGAGGTCCCCTGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GSLVTKLSVDCLLPGPHLVRTCF*RSPEVL
Trigger: CAAGACCTCAGGGGACCTGCAGAAACACGTGCGGAC...AAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGCTCGCCTGTGTGGGTaGGCACATGTACCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPARLCG*AHVPCG
Trigger: TCCGCAAGGTACATGTGCGCACCCACACAGGCGAGC...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTCGCAGCCTGGCACCGTaGAAACGTATGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LVTKLSVDCLLPGPHLGCRSLAP*KRMASP
Trigger: GGGAGAAGCCATACGTTTGCACGGTGCCAGGCTGCG...ACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACTGTGCGCTGCGCTTGTaGATGGCCAGGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VWVQATRLPLCHRQAKRHCALRL*MARVEV
Trigger: AACCTCCACCCTGGCCATGCACAAGCGCAGCGCACA...GTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp AGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGATGTGCGCTGCGCTTGTaGATGGCCAGGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SSVSTACCLALILGVAHRCALRL*MARVEV
Trigger: AACCTCCACCCTGGCCATGCACAAGCGCAGCGCACA...TCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp ACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGGCTCCCCGTGTGCGCTaGGCTTGTGCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TTSLRKGVDRAGIISCQGAPRVR*ACAWPG
Trigger: CCCTGGCCATGCACAAGCGCAGCGCACACGGGGAGC...CCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTGCTCCCCGTGTGCGCTaGGCTTGTGCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EGSGQSRNNILPREGRRCAPRVR*ACAWPG
Trigger: CCCTGGCCATGCACAAGCGCAGCGCACACGGGGAGC...ACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CCATCCTCCTCCGTCACCATGGCTACTTGGGTTGGGATGGCACTGCTCTCTTCCGCCTCCAGCTGCTGCTaGTCATACAGGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PSSSVTMATWVGMALLSSASSCC*SYRACS
Trigger: CGAGCAGGCCCTGTATGAGCAGCAGCAGCTGGAGGC...GGAAGAGAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR GCA 90 bp GACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTGGCAGCCTGCGGCCTCCAGCTGCTaGTGCTCATACAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: DRAGIISCQGRDAGVWQPAASSC*CSYRAC
Trigger: GCAGGCCCTGTATGAGCAGCAGCAGCTGGAGGCCGC...AGGCTGCCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGGTGGGTTGGGATGGCACTaGTCTCTTCCTTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: VPGAKWLGILATVAPGDGGLGWH*SLPSLP
Trigger: CGGAAGTGAAGGAAGAGAGCAGTGCCATCCCAACCC...ACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTGGCAGCCTGCACTCCCCAGGGCCTaGAGGTCTTCTGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: DRAGIISCQGRDAGVWQPALPRA*RSSGDR
Trigger: CCTGTCCCCAGAAGACCTGCAGGCCCTGGGGAGTGC...AGGCTGCCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR GCA 90 bp CGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTGTCACAGCCCCTTGCTaGATAGCAGCAGTGGCTACG +
Preference number: 4 (lower is better)
Translates to: RLLLGGAGLKAVGLSPGGVTAPC*IAAVAT
Trigger: CGTAGCCACTGCTGCTATGCAGCAAGGGGCTGTGAC...ACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp AGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGAGAACCGTCTTCCAGCTaGACAGCTTCCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SSVSTACCLALILGVAHREPSSS*TASRAL
Trigger: CAGCGCCCTGGAAGCTGTCCAGCTGGAAGACGGTTC...TCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp ACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCAGAACCGTCTTCCAGCTaGACAGCTTCCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: TKLSVDCLLPGPHLGCSPEPSSS*TASRAL
Trigger: CAGCGCCCTGGAAGCTGTCCAGCTGGAAGACGGTTC...TGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCCGTGCAGAACCTTGCTaGCATACTGCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QETVIAGRRWAESCRPFPRAEPC*HTAPGP
Trigger: TGGCCCTGGAGCAGTATGCCAGCAAGGTTCTGCACG...GGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp TGGTGTGGGAGCTGGTCCTCTTGGGCTCAGCAGCCGCTCTCTGTGGTTTCCAGGCGTGCAGAACCTTGCTaGCATACTGCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: WCGSWSSWAQQPLSVVSRRAEPC*HTAPGP
Trigger: TGGCCCTGGAGCAGTATGCCAGCAAGGTTCTGCACG...CCTGGAAACCACAGAGAGCGGCTGCTGAGCCCAAGAGGACCAGCTCCCACACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233841.2
CDS-3UTR CCA 90 bp GTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTCACGGCCGCTCGCCTGTGTaGGTGCGCACATGTACCTTG +
Preference number: 4 (lower is better)
Translates to: VQATRLPLCHRQAKRHLHGRSPV*VRTCTL
Trigger: CAAGGTACATGTGCGCACCCACACAGGCGAGCGGCC...GTGAAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp TCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACGCGCTTTCCGCAGCCTaGCACCGTGCAAACGTATGG +
Preference number: 4 (lower is better)
Translates to: STACCLALILGVAHRPFHALSAA*HRANVW
Trigger: CCATACGTTTGCACGGTGCCAGGCTGCGGAAAGCGC...GTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGCGCTTTCCGCAGCCTaGCACCGTGCAAACGTATGG +
Preference number: 4 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPALSAA*HRANVW
Trigger: CCATACGTTTGCACGGTGCCAGGCTGCGGAAAGCGC...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTGCGCTTTCCGCAGCCTaGCACCGTGCAAACGTATGG +
Preference number: 4 (lower is better)
Translates to: LVTKLSVDCLLPGPHLGCALSAA*HRANVW
Trigger: CCATACGTTTGCACGGTGCCAGGCTGCGGAAAGCGC...ACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGTGTGCATGGCCAGGGTaGAGGTTTGCCGGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: QPGDQAQCRLPAAWPSSWCAWPG*RFAGRS
Trigger: AGACCTACCGGCAAACCTCCACCCTGGCCATGCACA...CCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp TCCCCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGTGTGCATGGCCAGGGTaGAGGTTTGCCGGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: SPAVWVQATRLPLCHRQACAWPG*RFAGRS
Trigger: AGACCTACCGGCAAACCTCCACCCTGGCCATGCACA...CGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp TGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTCGCTGCGCTTGTGCATaGCCAGGGTGGAGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: WVQATRLPLCHRQAKRHLRCACA*PGWRFA
Trigger: GGCAAACCTCCACCCTGGCCATGCACAAGCGCAGCG...AAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CCTCGTCCACCTAGTCACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATCGCTGCGCTTGTGCATaGCCAGGGTGGAGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: PRPPSHHLPEEGSGQSRNRCACA*PGWRFA
Trigger: GGCAAACCTCCACCCTGGCCATGCACAAGCGCAGCG...ATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGTGACTAGGTGGACGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp ACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGGCTCGCTCTCCTCCGTaGCCTCCAGCTCCCCGTGTG +
Preference number: 4 (lower is better)
Translates to: TTSLRKGVDRAGIISCQGARSPP*PPAPRV
Trigger: CACACGGGGAGCTGGAGGCCACGGAGGAGAGCGAGC...CCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGAGCTCGCTCTCCTCCGTaGCCTCCAGCTCCCCGTGTG +
Preference number: 4 (lower is better)
Translates to: LPEEGSGQSRNNILPREGARSPP*PPAPRV
Trigger: CACACGGGGAGCTGGAGGCCACGGAGGAGAGCGAGC...TCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTGTGTTCCGTTGGCTGTaGCCAACAGCGCCACCTGTT +
Preference number: 4 (lower is better)
Translates to: RLLLGGAGLKAVGLSPGGVFRWL*PTAPPV
Trigger: AACAGGTGGCGCTGTTGGCCACAGCCAACGGAACAC...ACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGGTTACGATGTGTGTTCCGTTaGCTGTGGCCAACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: PWCQVARHLGHRSPRRRLRCVFR*LWPTAP
Trigger: TGGCGCTGTTGGCCACAGCCAACGGAACACACATCG...TAACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp ACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGCAGTGGCTACGCTTATaGCCTCCTCCAGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: TVIAGRRWAESCRPFPWWQWLRL*PPPGSA
Trigger: AGCAGACCCTGGAGGAGGCCATAAGCGTAGCCACTG...CCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
3UTR CAA 72 bp TGGTGGGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTaGGCCACCGTAGCCCCAGGAGACGGTTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: WWEVPGAKWLGI*ATVAPGDGYCW
Trigger: CCAGCAATAACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp GCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCTGTTGTCCCATCACTaGGCCTCACCGTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: AVWVQATRLPLCHRQAKRLLSHH*ASPFAA
Trigger: GGCTGCAAACGGTGAGGCTCAGTGATGGGACAACAG...CCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp GGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTTGTATCGTCACCTGGTaGATGTACGCAGTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: GSLVTKLSVDCLLPGPHLCIVTW*MYAVVP
Trigger: CGGGACCACTGCGTACATTCACCAGGTGACGATACA...AAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp CCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGGTTATGTATCGTCACCTGGTaGATGTACGCAGTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: PWCQVARHLGHRSPRRRLCIVTW*MYAVVP
Trigger: CGGGACCACTGCGTACATTCACCAGGTGACGATACA...TAACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp CCCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGGTCCCCTGAGGTCTTaGAGGCTTTGCTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: PSSLGTGHSLASLPQTSEGPLRS*RLCCTA
Trigger: AGCTGTGCAGCAAAGCCTTCAAGACCTCAGGGGACC...TTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp GCTGACCTGCTGGGTACCGTCCTGAGTGATCAGAGCCACCTGAGGGGGCCCATCTTTCTGCAGGTCCCCTaGGGTCTTGAAGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: ADLLGTVLSDQSHLRGPIFLQVP*GLEGFA
Trigger: AGCAAAGCCTTCAAGACCTCAGGGGACCTGCAGAAA...GATGGGCCCCCTCAGGTGGCTCTGATCACTCAGGACGGTACCCAGCAGGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR TCA 90 bp GTGGTGGGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCTTTCTGCAGGTCCCCTaGGGTCTTGAAGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VVGSPWCQVARHLGHRSPFLQVP*GLEGFA
Trigger: AGCAAAGCCTTCAAGACCTCAGGGGACCTGCAGAAA...GGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp GCTGACCTGCTGGGTACCGTCCTGAGTGATCAGAGCCACCTGAGGGGGCCCATCTACCTTGCGGATATTTaGTGTGGTGAAGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: ADLLGTVLSDQSHLRGPIYLADI*CGEGAA
Trigger: GGCCGCTCCTTCACCACATCAAATATCCGCAAGGTA...GATGGGCCCCCTCAGGTGGCTCTGATCACTCAGGACGGTACCCAGCAGGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR TCA 90 bp GGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTGGCTTCTGGGGACAGGCTaGCCTGCTGGGTACCGTCCT +
Preference number: 4 (lower is better)
Translates to: GVDRAGIISCQGRDAGVWLLGTG*PAGYRP
Trigger: AGGACGGTACCCAGCAGGTCAGCCTGTCCCCAGAAG...CCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
CDS-3UTR GCA 90 bp GCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGGTATGTAGGCCATGCTaGCGTCTTCCAGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: AVWVQATRLPLCHRQAKRVCRPC*RLPAAR
Trigger: CCGTGCAGCTGGAAGACGGCAGCATGGCCTACATAC...CCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp TCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACGTATGTAGGCCATGCTaGCGTCTTCCAGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: STACCLALILGVAHRPFHVCRPC*RLPAAR
Trigger: CCGTGCAGCTGGAAGACGGCAGCATGGCCTACATAC...GTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CCCCAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCGGTGTATGTAGGCCATaGTGCCGTCTTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PQETVIAGRRWAESCRPFGVCRP*CRLPAA
Trigger: TGCAGCTGGAAGACGGCAGCATGGCCTACATACACC...GAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCAAGCCCGCCTCCGTCTaGACAGCCAGGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PGPHLGCSPQTFPLEAIFKPASV*TARMAL
Trigger: CAGCGCCATCCTGGCTGTGCAGACGGAGGCGGGCTT...GAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGAAAGCCCGCCTCCGTCTaGACAGCCAGGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: LPEEGSGQSRNNILPREGKPASV*TARMAL
Trigger: CAGCGCCATCCTGGCTGTGCAGACGGAGGCGGGCTT...TCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGAAGCCCGCCTCCGTCTaGACAGCCAGGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: HHLPEEGSGQSRNNILPRKPASV*TARMAL
Trigger: CAGCGCCATCCTGGCTGTGCAGACGGAGGCGGGCTT...CCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CAGGCCCCTGAGGAATTAATTCTGACTGTGGTGGTGGGAAGTCCCTGGTGCCAAAAGCCCGCCTCCGTCTaGACAGCCAGGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: QAPEELILTVVVGSPWCQKPASV*TARMAL
Trigger: CAGCGCCATCCTGGCTGTGCAGACGGAGGCGGGCTT...TTGGCACCAGGGACTTCCCACCACCACAGTCAGAATTAATTCCTCAGGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp TCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTATGCGGCCATTCCTCGTCTTCCGCTaGCAGGTCCTCCAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: STRGHFPVASSPLRPMRPFLVFR*QVLQAR
Trigger: GCGGGCTTGGAGGACCTGGCAGCGGAAGACGAGGAA...TGGCCGCATAGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp AGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGAACCTTGCTGGCATACTaGTCCAGGGCCACCACTGTG +
Preference number: 4 (lower is better)
Translates to: SSVSTACCLALILGVAHRTLLAY*SRATTV
Trigger: CACAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGT...TCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTACCTTGCTGGCATACTaGTCCAGGGCCACCACTGTG +
Preference number: 4 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPTLLAY*SRATTV
Trigger: CACAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGT...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp ACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCAACCTTGCTGGCATACTaGTCCAGGGCCACCACTGTG +
Preference number: 4 (lower is better)
Translates to: TKLSVDCLLPGPHLGCSPTLLAY*SRATTV
Trigger: CACAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGT...TGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CCCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAACAACCTGCTGCCCTTTaGCATTGTGGGAAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PSSLGTGHSLASLPQTSEQPAAL*HCGKQG
Trigger: GCCCTGCTTCCCACAATGGCAAAGGGCAGCAGGTTG...TTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTCAACCTGCTGCCCTTTaGCATTGTGGGAAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPQPAAL*HCGKQG
Trigger: GCCCTGCTTCCCACAATGGCAAAGGGCAGCAGGTTG...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp ACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCAGTCCGCACGTGTTTCTaGAGGTCCCCTGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TKLSVDCLLPGPHLGCSPVRTCF*RSPEVL
Trigger: CAAGACCTCAGGGGACCTGCAGAAACACGTGCGGAC...TGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGCCCATCCTCCTCCGTCACCATGGCTACTTGGGTTGGGATGGCACTGCTCTCTGTCCGCACGTGTTTCTaGAGGTCCCCTGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GPSSSVTMATWVGMALLSVRTCF*RSPEVL
Trigger: CAAGACCTCAGGGGACCTGCAGAAACACGTGCGGAC...AGAGAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR GCA 90 bp AGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCAGCTCGCCTGTGTGGGTaGGCACATGTACCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: SLGTGHSLASLPQTSEEAARLCG*AHVPCG
Trigger: TCCGCAAGGTACATGTGCGCACCCACACAGGCGAGC...TGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTCACCGCAGCCTGGCACCGTaGAAACGTATGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VQATRLPLCHRQAKRHLHRSLAP*KRMASP
Trigger: GGGAGAAGCCATACGTTTGCACGGTGCCAGGCTGCG...GTGAAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGGACGCAGGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGTTTGCCGGTAGGTCTTaGCACAGCTACTGCACGTGT +
Preference number: 4 (lower is better)
Translates to: GTQVSGSLVTKLSVDCLLFAGRS*HSYCTC
Trigger: ACACGTGCAGTAGCTGTGGCAAGACCTACCGGCAAA...CAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GTGGTGGGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCTTTGCCGGTAGGTCTTaGCACAGCTACTGCACGTGT +
Preference number: 4 (lower is better)
Translates to: VVGSPWCQVARHLGHRSPFAGRS*HSYCTC
Trigger: ACACGTGCAGTAGCTGTGGCAAGACCTACCGGCAAA...GGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp TCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTATGCGGCCAGCCTCCAGCTGCTGCTaGTCATACAGGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: STRGHFPVASSPLRPMRPASSCC*SYRACS
Trigger: CGAGCAGGCCCTGTATGAGCAGCAGCAGCTGGAGGC...TGGCCGCATAGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CAGGCCCCTGAGGAATTAATTCTGACTGTGGTGGTGGGAAGTCCCTGGTGCCAAGCACTCCCCAGGGCCTaGAGGTCTTCTGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: QAPEELILTVVVGSPWCQALPRA*RSSGDR
Trigger: CCTGTCCCCAGAAGACCTGCAGGCCCTGGGGAGTGC...TTGGCACCAGGGACTTCCCACCACCACAGTCAGAATTAATTCCTCAGGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR GCA 90 bp CTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGGGTGGTGCTGCCGTaGTGTGTCACCACACTGATG +
Preference number: 4 (lower is better)
Translates to: LVTKLSVDCLLPGPHLGCRVVLP*CVTTLM
Trigger: CATCAGTGTGGTGACACAGCACGGCAGCACCACCCT...ACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR GCA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTAGGGTGGTGCTGCCGTaGTGTGTCACCACACTGATG +
Preference number: 4 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPRVVLP*CVTTLM
Trigger: CATCAGTGTGGTGACACAGCACGGCAGCACCACCCT...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR CCA 90 bp TGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTGAACCGTCTTCCAGCTaGACAGCTTCCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: WVQATRLPLCHRQAKRHLEPSSS*TASRAL
Trigger: CAGCGCCCTGGAAGCTGTCCAGCTGGAAGACGGTTC...AAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp TCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACCGTGCAGAACCTTGCTaGCATACTGCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: STACCLALILGVAHRPFHRAEPC*HTAPGP
Trigger: TGGCCCTGGAGCAGTATGCCAGCAAGGTTCTGCACG...GTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp AGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACGTGCAGAACCTTGCTaGCATACTGCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSVSTACCLALILGVAHRRAEPC*HTAPGP
Trigger: TGGCCCTGGAGCAGTATGCCAGCAAGGTTCTGCACG...TCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CCATCCTCCTCCGTCACCATGGCTACTTGGGTTGGGATGGCACTGCTCTCTTCCGCGCTTTCCGCAGCCTaGCACCGTGCAAACGTATGG +
Preference number: 4 (lower is better)
Translates to: PSSSVTMATWVGMALLSSALSAA*HRANVW
Trigger: CCATACGTTTGCACGGTGCCAGGCTGCGGAAAGCGC...GGAAGAGAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR CCA 90 bp CCCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAATGTGCATGGCCAGGGTaGAGGTTTGCCGGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: PSSLGTGHSLASLPQTSECAWPG*RFAGRS
Trigger: AGACCTACCGGCAAACCTCCACCCTGGCCATGCACA...TTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GGCCCATCCTCCTCCGTCACCATGGCTACTTGGGTTGGGATGGCACTGCTCTCTTGTGCATGGCCAGGGTaGAGGTTTGCCGGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: GPSSSVTMATWVGMALLSCAWPG*RFAGRS
Trigger: AGACCTACCGGCAAACCTCCACCCTGGCCATGCACA...AGAGAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR CCA 90 bp ACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCATGTGCATGGCCAGGGTaGAGGTTTGCCGGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: TKLSVDCLLPGPHLGCSPCAWPG*RFAGRS
Trigger: AGACCTACCGGCAAACCTCCACCCTGGCCATGCACA...TGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp ACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACGATGTGTGTTCCGTTaGCTGTGGCCAACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: TKLSVDCLLPGPHLGCSPRCVFR*LWPTAP
Trigger: TGGCGCTGTTGGCCACAGCCAACGGAACACACATCG...TGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp AGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACAGTGGCTACGCTTATaGCCTCCTCCAGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SSVSTACCLALILGVAHRQWLRL*PPPGSA
Trigger: AGCAGACCCTGGAGGAGGCCATAAGCGTAGCCACTG...TCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp GTTGGTGATGAAGAGACGCCACGCTTGAGTCCTCAGTCACCAAGGCCCCAGAGGCTGTTGTCCCATCACTaGGCCTCACCGTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VGDEETPRLSPQSPRPQRLLSHH*ASPFAA
Trigger: GGCTGCAAACGGTGAGGCTCAGTGATGGGACAACAG...CCTCTGGGGCCTTGGTGACTGAGGACTCAAGCGTGGCGTCTCTTCATCACCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233841.2
CDS-3UTR TCA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTTGTATCGTCACCTGGTaGATGTACGCAGTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPCIVTW*MYAVVP
Trigger: CGGGACCACTGCGTACATTCACCAGGTGACGATACA...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp CCCCAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCTCCAGCTGCACGGGCTaGCCATCTTCAAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PQETVIAGRRWAESCRPFSSCTG*PSSKEK
Trigger: TTTCTCCTTTGAAGATGGTCAGCCCGTGCAGCTGGA...GAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp CGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTTTTCTGCAGGTCCCCTaGGGTCTTGAAGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RLLLGGAGLKAVGLSPGGFLQVP*GLEGFA
Trigger: AGCAAAGCCTTCAAGACCTCAGGGGACCTGCAGAAA...ACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp GGGCTGAGTCTGCGTGCCATCAGCGCTGACCATGGTGACCGTGTGTGTGCCAGATTTCTGCAGGTCCCCTaGGGTCTTGAAGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: GLSLRAISADHGDRVCARFLQVP*GLEGFA
Trigger: AGCAAAGCCTTCAAGACCTCAGGGGACCTGCAGAAA...TCTGGCACACACACGGTCACCATGGTCAGCGCTGATGGCACGCAGACTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232845.2
ENSMUST00000233841.2
CDS-3UTR TCA 90 bp CAGGCCCCTGAGGAATTAATTCTGACTGTGGTGGTGGGAAGTCCCTGGTGCCAAAGTTGGTGGCGCTGGTaGAGCCACGACCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: QAPEELILTVVVGSPWCQSWWRW*SHDHSG
Trigger: CCCACTGTGGTCGTGGCTTCACCAGCGCCACCAACT...TTGGCACCAGGGACTTCCCACCACCACAGTCAGAATTAATTCCTCAGGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp CAGGCCCCTGAGGAATTAATTCTGACTGTGGTGGTGGGAAGTCCCTGGTGCCAACTTCTGGGGACAGGCTaGCCTGCTGGGTACCGTCCT +
Preference number: 4 (lower is better)
Translates to: QAPEELILTVVVGSPWCQLLGTG*PAGYRP
Trigger: AGGACGGTACCCAGCAGGTCAGCCTGTCCCCAGAAG...TTGGCACCAGGGACTTCCCACCACCACAGTCAGAATTAATTCCTCAGGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
CDS-3UTR TCA 90 bp GAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTTCTGGGGACAGGCTaGCCTGCTGGGTACCGTCCT +
Preference number: 4 (lower is better)
Translates to: EGSGQSRNNILPREGRRCLLGTG*PAGYRP
Trigger: AGGACGGTACCCAGCAGGTCAGCCTGTCCCCAGAAG...ACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
CDS-3UTR TCA 90 bp CCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCGCTGTGTCACCACACTaGTGGCACTCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PGPHLGCSPQTFPLEAIFAVSPH*WHSPGP
Trigger: AGGCCCTGGGGAGTGCCATCAGTGTGGTGACACAGC...GAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR TCA 90 bp CAGGCCCCTGAGGAATTAATTCTGACTGTGGTGGTGGGAAGTCCCTGGTGCCAAGCTGTGTCACCACACTaGTGGCACTCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QAPEELILTVVVGSPWCQAVSPH*WHSPGP
Trigger: AGGCCCTGGGGAGTGCCATCAGTGTGGTGACACAGC...TTGGCACCAGGGACTTCCCACCACCACAGTCAGAATTAATTCCTCAGGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR TCA 90 bp AGCGAAGAGGCACCTTCACTCCAGCCACAGGCCCCTGAGGAATTAATTCTGACTGATGACCGGGGATGGTaGGGGTGGTGCTGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: SEEAPSLQPQAPEELILTDDRGW*GWCCRA
Trigger: AGCACGGCAGCACCACCCTCACCATCCCCGGTCATC...AGTCAGAATTAATTCCTCAGGGGCCTGTGGCTGGAGTGAAGGTGCCTCTTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR TCA 90 bp CCTGTTGGTGATGAAGAGACGCCACGCTTGAGTCCTCAGTCACCAAGGCCCCAGCTTCTGGGGACAGGCTaGCCTGTATGGATGCGCACA +
Preference number: 4 (lower is better)
Translates to: PVGDEETPRLSPQSPRPQLLGTG*PVWMRT
Trigger: TGTGCGCATCCATACAGGTCAGCCTGTCCCCAGAAG...CTGGGGCCTTGGTGACTGAGGACTCAAGCGTGGCGTCTCTTCATCACCAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233841.2
CDS-3UTR GCA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGTATGTAGGCCATaGTGCCGTCTTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPGVCRP*CRLPAA
Trigger: TGCAGCTGGAAGACGGCAGCATGGCCTACATACACC...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GTCCTGAGTGATCAGAGCCACCTGAGGGGGCCCATCCTCCTCCGTCACCATGGCGGCTTGCAATGTGTGTaGACCACGTGGTGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: VLSDQSHLRGPILLRHHGGLQCV*TTWCLY
Trigger: GTACAAACACCACGTGGTGCACACACATTGCAAGCC...GCCATGGTGACGGAGGAGGATGGGCCCCCTCAGGTGGCTCTGATCACTCAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR GCA 90 bp GTGGTGGGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCGGCTTGCAATGTGTGTaGACCACGTGGTGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: VVGSPWCQVARHLGHRSPGLQCV*TTWCLY
Trigger: GTACAAACACCACGTGGTGCACACACATTGCAAGCC...GGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CCTCCAGCTGCACTGCGATGTGTGTTCCGTTGGCTGTGGCCAACAGCGCCACCTTGCACGTGTAGGGCTTaGAATGTGTGTGCACCACGT +
Preference number: 4 (lower is better)
Translates to: PPAALRCVFRWLWPTAPPCTCRA*NVCAPR
Trigger: ACGTGGTGCACACACATTGCAAGCCCTACACGTGCA...AGGTGGCGCTGTTGGCCACAGCCAACGGAACACACATCGCAGTGCAGCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129522.4
CDS-3UTR GCA 90 bp TCAGAGCCACCTGAGGGGGCCCATCCTCCTCCGTCACCATGGCTACTTGGGTTGTGCACGTGTAGGGCTTaGAATGTGTGTGCACCACGT +
Preference number: 4 (lower is better)
Translates to: SEPPEGAHPPPSPWLLGLCTCRA*NVCAPR
Trigger: ACGTGGTGCACACACATTGCAAGCCCTACACGTGCA...CAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGCCCCCTCAGGTGGCTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR GCA 90 bp CAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGCACGTGTAGGGCTTaGAATGTGTGTGCACCACGT +
Preference number: 4 (lower is better)
Translates to: QETVIAGRRWAESCRPFPCTCRA*NVCAPR
Trigger: ACGTGGTGCACACACATTGCAAGCCCTACACGTGCA...GGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGGATGGTGAGGGTGGTGCTGCCGTGCTGTGTCACCACACTGATGGCACTCCCCTCTTGCCACAGCTACTaGACGTGTAGGGCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: GMVRVVLPCCVTTLMALPSCHSY*TCRACN
Trigger: ATTGCAAGCCCTACACGTGCAGTAGCTGTGGCAAGA...GGGGAGTGCCATCAGTGTGGTGACACAGCACGGCAGCACCACCCTCACCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR GCA 90 bp CCCCAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCTTTGCCGGTAGGTCTTaGCACAGCTACTGCACGTGT +
Preference number: 4 (lower is better)
Translates to: PQETVIAGRRWAESCRPFFAGRS*HSYCTC
Trigger: ACACGTGCAGTAGCTGTGGCAAGACCTACCGGCAAA...GAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTTTGCCGGTAGGTCTTaGCACAGCTACTGCACGTGT +
Preference number: 4 (lower is better)
Translates to: QETVIAGRRWAESCRPFPFAGRS*HSYCTC
Trigger: ACACGTGCAGTAGCTGTGGCAAGACCTACCGGCAAA...GGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp AGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGCCTCCAGCTGCTGCTaGTCATACAGGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RKGVDRAGIISCQGRDAGASSCC*SYRACS
Trigger: CGAGCAGGCCCTGTATGAGCAGCAGCAGCTGGAGGC...ACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACGGGTTGGGATGGCACTaGTCTCTTCCTTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: VWVQATRLPLCHRQAKRHGLGWH*SLPSLP
Trigger: CGGAAGTGAAGGAAGAGAGCAGTGCCATCCCAACCC...GTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp TTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTACTAGGGTGGTGCTGCCGTaGTGTGTCACCACACTGATG +
Preference number: 4 (lower is better)
Translates to: LLLGGAGLKAVGLSPGGTRVVLP*CVTTLM
Trigger: CATCAGTGTGGTGACACAGCACGGCAGCACCACCCT...AGTACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR CCA 90 bp CCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCCAGCTTCCAGGGCGCTaGGGTCACAGCCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: PGPHLGCSPQTFPLEAIFQLPGR*GHSPLW
Trigger: CCAAAGAGGGCTGTGACCCCAGCGCCCTGGAAGCTG...GAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GCTGACCTGCTGGGTACCGTCCTGAGTGATCAGAGCCACCTGAGGGGGCCCATCTTAAGTGATGGGCAGTaGTGTAGAGACGACCACAGC +
Preference number: 4 (lower is better)
Translates to: ADLLGTVLSDQSHLRGPILSDGQ*CRDDHS
Trigger: GCTGTGGTCGTCTCTACACCACTGCCCATCACTTAA...GATGGGCCCCCTCAGGTGGCTCTGATCACTCAGGACGGTACCCAGCAGGTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR CCA 90 bp GTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTTTAAGTGATGGGCAGTaGTGTAGAGACGACCACAGC +
Preference number: 4 (lower is better)
Translates to: VSGSLVTKLSVDCLLPGPLSDGQ*CRDDHS
Trigger: GCTGTGGTCGTCTCTACACCACTGCCCATCACTTAA...AGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GTGGTGGGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGCCTTTCCACAGCTaGGAAAGTCACACCTGTATG +
Preference number: 4 (lower is better)
Translates to: VVGSPWCQVARHLGHRSPRPFHS*ESHTCM
Trigger: CATACAGGTGTGACTTTCCCAGCTGTGGAAAGGCCT...GGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp ACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGGCTGCACAGCTCCTCTaGGCACTTGTATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: TVIAGRRWAESCRPFPWWAAQLL*ALVWFL
Trigger: GAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGC...CCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGCTGCACAGCTCCTCTaGGCACTTGTATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: QPGDQAQCRLPAAWPSSWAAQLL*ALVWFL
Trigger: GAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGC...CCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GATGGTGAGGGTGGTGCTGCCGTGCTGTGTCACCACACTGATGGCACTCCCCAGGCTGCACAGCTCCTCTaGGCACTTGTATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: DGEGGAAVLCHHTDGTPQAAQLL*ALVWFL
Trigger: GAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGC...CTGGGGAGTGCCATCAGTGTGGTGACACAGCACGGCAGCACCACCCTCACCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR CCA 90 bp CCCCAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCGCTGCACAGCTCCTCTaGGCACTTGTATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: PQETVIAGRRWAESCRPFAAQLL*ALVWFL
Trigger: GAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGC...GAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CCCCAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCTGTGTGTGCACCACGTaGTGTTTGTACAGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: PQETVIAGRRWAESCRPFCVCTT*CLYRLE
Trigger: CTCGAGCCTGTACAAACACCACGTGGTGCACACACA...GAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GGGCTGAGTCTGCGTGCCATCAGCGCTGACCATGGTGACCGTGTGTGTGCCAGATGTGTGTGCACCACGTaGTGTTTGTACAGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: GLSLRAISADHGDRVCARCVCTT*CLYRLE
Trigger: CTCGAGCCTGTACAAACACCACGTGGTGCACACACA...TCTGGCACACACACGGTCACCATGGTCAGCGCTGATGGCACGCAGACTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR CCA 90 bp GGGACGCAGGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCTACTTGGGTTGGGATaGCACTGCTCTCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GTQVSGSLVTKLSVDCLLLLGLG*HCSLPS
Trigger: TGAAGGAAGAGAGCAGTGCCATCCCAACCCAAGTAG...CAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp ACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCAGTCACCATGGCTACTTaGGTTGGGATGGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: TKLSVDCLLPGPHLGCSPVTMAT*VGMALL
Trigger: GAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGAC...TGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGTCACCATGGCTACTTaGGTTGGGATGGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPVTMAT*VGMALL
Trigger: GAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGAC...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTTCCAGCTGCACGGGCTaGCCATCTTCAAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPSSCTG*PSSKEK
Trigger: TTTCTCCTTTGAAGATGGTCAGCCCGTGCAGCTGGA...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp TCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACTTTCTGCAGGTCCCCTaGGGTCTTGAAGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: STACCLALILGVAHRPFHFLQVP*GLEGFA
Trigger: AGCAAAGCCTTCAAGACCTCAGGGGACCTGCAGAAA...GTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp GGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTCTACCTTGCGGATATTTaGTGTGGTGAAGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: GYRPLACLSATDKRRGTFYLADI*CGEGAA
Trigger: GGCCGCTCCTTCACCACATCAAATATCCGCAAGGTA...GAAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp CCCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAATACCTTGCGGATATTTaGTGTGGTGAAGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: PSSLGTGHSLASLPQTSEYLADI*CGEGAA
Trigger: GGCCGCTCCTTCACCACATCAAATATCCGCAAGGTA...TTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTGGGTACCGTCCTGAGTaGTCAGAGCCACCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPGYRPE*SEPPEG
Trigger: CCCCTCAGGTGGCTCTGATCACTCAGGACGGTACCC...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp TGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTGGTGTATGTAGGCCATaGTGCCGTCTTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: WVQATRLPLCHRQAKRHLGVCRP*CRLPAA
Trigger: TGCAGCTGGAAGACGGCAGCATGGCCTACATACACC...AAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTTTCCTCGTCTTCCGCTaGCAGGTCCTCCAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPFLVFR*QVLQAR
Trigger: GCGGGCTTGGAGGACCTGGCAGCGGAAGACGAGGAA...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp TCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTATGCGGCCAACCTTGCTGGCATACTaGTCCAGGGCCACCACTGTG +
Preference number: 4 (lower is better)
Translates to: STRGHFPVASSPLRPMRPTLLAY*SRATTV
Trigger: CACAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGT...TGGCCGCATAGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp AGGGTCACAGCCCCTTGCTGCATAGCAGCAGTGGCTACGCTTATGGCCTCCTCCTATCGTGCAGAACCTTaGTGGCATACTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RVTAPCCIAAVATLMASSYRAEP*WHTAPG
Trigger: CCCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATA...GGAGGAGGCCATAAGCGTAGCCACTGCTGCTATGCAGCAAGGGGCTGTGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233841.2
CDS-3UTR GCA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTTATCGTGCAGAACCTTaGTGGCATACTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPYRAEP*WHTAPG
Trigger: CCCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATA...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGAGGCTTGCAATGTGTGTaGACCACGTGGTGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: GSPWCQVARHLGHRSPRRGLQCV*TTWCLY
Trigger: GTACAAACACCACGTGGTGCACACACATTGCAAGCC...TCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp TCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACTGCACGTGTAGGGCTTaGAATGTGTGTGCACCACGT +
Preference number: 4 (lower is better)
Translates to: STACCLALILGVAHRPFHCTCRA*NVCAPR
Trigger: ACGTGGTGCACACACATTGCAAGCCCTACACGTGCA...GTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTTCTTGCCACAGCTACTaGACGTGTAGGGCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: GSLVTKLSVDCLLPGPHLSCHSY*TCRACN
Trigger: ATTGCAAGCCCTACACGTGCAGTAGCTGTGGCAAGA...AAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGCCCATCCTCCTCCGTCACCATGGCTACTTGGGTTGGGATGGCACTGCTCTCTTTTGCCGGTAGGTCTTaGCACAGCTACTGCACGTGT +
Preference number: 4 (lower is better)
Translates to: GPSSSVTMATWVGMALLSFAGRS*HSYCTC
Trigger: ACACGTGCAGTAGCTGTGGCAAGACCTACCGGCAAA...AGAGAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR GCA 90 bp CACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGTGTGCGCTGCGCTTGTaGATGGCCAGGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: HHLPEEGSGQSRNNILPRCALRL*MARVEV
Trigger: AACCTCCACCCTGGCCATGCACAAGCGCAGCGCACA...CCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp AGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCAGGGTTGGGATGGCACTaGTCTCTTCCTTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: SLGTGHSLASLPQTSEEAGLGWH*SLPSLP
Trigger: CGGAAGTGAAGGAAGAGAGCAGTGCCATCCCAACCC...TGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTCGATGGATGTAGGCAGTaGAACCGTCTTCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GYRPLACLSATDKRRGTFDGCRQ*NRLPAG
Trigger: TCCAGCTGGAAGACGGTTCCACTGCCTACATCCATC...GAAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp ACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGAGGCCTTTCCACAGCTaGGAAAGTCACACCTGTATG +
Preference number: 4 (lower is better)
Translates to: TVIAGRRWAESCRPFPWWRPFHS*ESHTCM
Trigger: CATACAGGTGTGACTTTCCCAGCTGTGGAAAGGCCT...CCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GATGGTGAGGGTGGTGCTGCCGTGCTGTGTCACCACACTGATGGCACTCCCCAGAGGCCTTTCCACAGCTaGGAAAGTCACACCTGTATG +
Preference number: 4 (lower is better)
Translates to: DGEGGAAVLCHHTDGTPQRPFHS*ESHTCM
Trigger: CATACAGGTGTGACTTTCCCAGCTGTGGAAAGGCCT...CTGGGGAGTGCCATCAGTGTGGTGACACAGCACGGCAGCACCACCCTCACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR CCA 90 bp AGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGCGCTTTCCGCAGCCTaGCACCGTGCAAACGTATGG +
Preference number: 4 (lower is better)
Translates to: RKGVDRAGIISCQGRDAGALSAA*HRANVW
Trigger: CCATACGTTTGCACGGTGCCAGGCTGCGGAAAGCGC...ACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CCCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAATGTGTGTGCACCACGTaGTGTTTGTACAGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: PSSLGTGHSLASLPQTSECVCTT*CLYRLE
Trigger: CTCGAGCCTGTACAAACACCACGTGGTGCACACACA...TTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp ATGGAGCCTTCTCCAGTGTGGTGTGGGAGCTGGTCCTCTTGGGCTCAGCAGCCGCTACTTGGGTTGGGATaGCACTGCTCTCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: MEPSPVWCGSWSSWAQQPLLGLG*HCSLPS
Trigger: TGAAGGAAGAGAGCAGTGCCATCCCAACCCAAGTAG...CGGCTGCTGAGCCCAAGAGGACCAGCTCCCACACCACACTGGAGAAGGCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129522.4
CDS-3UTR CCA 90 bp ACGCAGGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTCTACTTGGGTTGGGATaGCACTGCTCTCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TQVSGSLVTKLSVDCLLPLLGLG*HCSLPS
Trigger: TGAAGGAAGAGAGCAGTGCCATCCCAACCCAAGTAG...AGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
3UTR CAA 72 bp TTGCCATTGTGGGAAGCAGGGCTATCGTGCAGAACCTaGCTGGCATACTGCTCCAGGGCCACCACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LPLWEAGLSCRT*LAYCSRATTVS
Trigger: GGACACAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATAGCCCTGCTTCCCACAATGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
CDS-3UTR TCA 90 bp GACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTGGCAGCCTTGTATCGTCACCTGGTaGATGTACGCAGTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: DRAGIISCQGRDAGVWQPCIVTW*MYAVVP
Trigger: CGGGACCACTGCGTACATTCACCAGGTGACGATACA...AGGCTGCCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp ACGTGGTGTTTGTACAGGCTCGAGTACTCCGTAAAGCGCTTTCCGCAGCCTGGCTGTATCGTCACCTGGTaGATGTACGCAGTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: TWCLYRLEYSVKRFPQPGCIVTW*MYAVVP
Trigger: CGGGACCACTGCGTACATTCACCAGGTGACGATACA...GCCAGGCTGCGGAAAGCGCTTTACGGAGTACTCGAGCCTGTACAAACACCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
CDS-3UTR TCA 90 bp CTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGAGGTCCCCTGAGGTCTTaGAGGCTTTGCTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: LPEEGSGQSRNNILPREGGPLRS*RLCCTA
Trigger: AGCTGTGCAGCAAAGCCTTCAAGACCTCAGGGGACC...TCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp CCTCGTCCACCTAGTCACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATTACCTTGCGGATATTTaGTGTGGTGAAGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: PRPPSHHLPEEGSGQSRNYLADI*CGEGAA
Trigger: GGCCGCTCCTTCACCACATCAAATATCCGCAAGGTA...ATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGTGACTAGGTGGACGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CAGGCCCCTGAGGAATTAATTCTGACTGTGGTGGTGGGAAGTCCCTGGTGCCAAGTATGTAGGCCATGCTaGCGTCTTCCAGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: QAPEELILTVVVGSPWCQVCRPC*RLPAAR
Trigger: CCGTGCAGCTGGAAGACGGCAGCATGGCCTACATAC...TTGGCACCAGGGACTTCCCACCACCACAGTCAGAATTAATTCCTCAGGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp TCTTGCCACAGCTACTGCACGTGTAGGGCTTGCAATGTGTGTGCACCACGTGGTGTATGTAGGCCATGCTaGCGTCTTCCAGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: SCHSYCTCRACNVCAPRGVCRPC*RLPAAR
Trigger: CCGTGCAGCTGGAAGACGGCAGCATGGCCTACATAC...ACCACGTGGTGCACACACATTGCAAGCCCTACACGTGCAGTAGCTGTGGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
CDS-3UTR GCA 90 bp CCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCGTATGTAGGCCATGCTaGCGTCTTCCAGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: PGPHLGCSPQTFPLEAIFVCRPC*RLPAAR
Trigger: CCGTGCAGCTGGAAGACGGCAGCATGGCCTACATAC...GAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCCTGCAACCTGCTGCCCTTTaGCATTGTGGGAAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GPHLGCSPQTFPLEAIFLQPAAL*HCGKQG
Trigger: GCCCTGCTTCCCACAATGGCAAAGGGCAGCAGGTTG...CAGGAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp AGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCCGCACGTGTTTCTaGAGGTCCCCTGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RKGVDRAGIISCQGRDAGVRTCF*RSPEVL
Trigger: CAAGACCTCAGGGGACCTGCAGAAACACGTGCGGAC...ACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTGCTCGCCTGTGTGGGTaGGCACATGTACCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPARLCG*AHVPCG
Trigger: TCCGCAAGGTACATGTGCGCACCCACACAGGCGAGC...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTCGCAGCCTGGCACCGTaGAAACGTATGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPRSLAP*KRMASP
Trigger: GGGAGAAGCCATACGTTTGCACGGTGCCAGGCTGCG...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACGGCTTGCAATGTGTGTaGACCACGTGGTGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: VWVQATRLPLCHRQAKRHGLQCV*TTWCLY
Trigger: GTACAAACACCACGTGGTGCACACACATTGCAAGCC...GTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CCCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGGCTTGCAATGTGTGTaGACCACGTGGTGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: PSSLGTGHSLASLPQTSEGLQCV*TTWCLY
Trigger: GTACAAACACCACGTGGTGCACACACATTGCAAGCC...TTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp TCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACGGCTTGCAATGTGTGTaGACCACGTGGTGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: STACCLALILGVAHRPFHGLQCV*TTWCLY
Trigger: GTACAAACACCACGTGGTGCACACACATTGCAAGCC...GTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp ACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCATCTTGCCACAGCTACTaGACGTGTAGGGCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: TKLSVDCLLPGPHLGCSPSCHSY*TCRACN
Trigger: ATTGCAAGCCCTACACGTGCAGTAGCTGTGGCAAGA...TGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTGGCAGCCTGGGTTGGGATGGCACTaGTCTCTTCCTTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: DRAGIISCQGRDAGVWQPGLGWH*SLPSLP
Trigger: CGGAAGTGAAGGAAGAGAGCAGTGCCATCCCAACCC...AGGCTGCCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTGGGGGTTGGGATGGCACTaGTCTCTTCCTTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: GVDRAGIISCQGRDAGVWGLGWH*SLPSLP
Trigger: CGGAAGTGAAGGAAGAGAGCAGTGCCATCCCAACCC...CCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCAGCTTCCAGGGCGCTaGGGTCACAGCCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LGCSPQTFPLEAIFLLPHQLPGR*GHSPLW
Trigger: CCAAAGAGGGCTGTGACCCCAGCGCCCTGGAAGCTG...ATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTCACGATGGATGTAGGCAGTaGAACCGTCTTCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VQATRLPLCHRQAKRHLHDGCRQ*NRLPAG
Trigger: TCCAGCTGGAAGACGGTTCCACTGCCTACATCCATC...GTGAAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp AGCATGGAGCCTTCTCCAGTGTGGTGTGGGAGCTGGTCCTCTTGGGCTCAGCAGTTAAGTGATGGGCAGTaGTGTAGAGACGACCACAGC +
Preference number: 4 (lower is better)
Translates to: SMEPSPVWCGSWSSWAQQLSDGQ*CRDDHS
Trigger: GCTGTGGTCGTCTCTACACCACTGCCCATCACTTAA...CTGCTGAGCCCAAGAGGACCAGCTCCCACACCACACTGGAGAAGGCTCCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233841.2
CDS-3UTR CCA 90 bp TGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTGCTGCACAGCTCCTCTaGGCACTTGTATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: WVQATRLPLCHRQAKRHLAAQLL*ALVWFL
Trigger: GAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGC...AAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp TTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTACTTGTGTGTGCACCACGTaGTGTTTGTACAGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: LLLGGAGLKAVGLSPGGTCVCTT*CLYRLE
Trigger: CTCGAGCCTGTACAAACACCACGTGGTGCACACACA...AGTACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCGCTGCGCTTGTGCATaGCCAGGGTGGAGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: LGCSPQTFPLEAIFLLPHRCACA*PGWRFA
Trigger: GGCAAACCTCCACCCTGGCCATGCACAAGCGCAGCG...ATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp ACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACTACTTGGGTTGGGATaGCACTGCTCTCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TKLSVDCLLPGPHLGCSPLLGLG*HCSLPS
Trigger: TGAAGGAAGAGAGCAGTGCCATCCCAACCCAAGTAG...TGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCGTGTTCCGTTGGCTGTaGCCAACAGCGCCACCTGTT +
Preference number: 4 (lower is better)
Translates to: PGPHLGCSPQTFPLEAIFVFRWL*PTAPPV
Trigger: AACAGGTGGCGCTGTTGGCCACAGCCAACGGAACAC...GAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGCGATGTGTGTTCCGTTaGCTGTGGCCAACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: HHLPEEGSGQSRNNILPRRCVFR*LWPTAP
Trigger: TGGCGCTGTTGGCCACAGCCAACGGAACACACATCG...CCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp GGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTGGTCCAGCTGCACGGGCTaGCCATCTTCAAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GVDRAGIISCQGRDAGVWSSCTG*PSSKEK
Trigger: TTTCTCCTTTGAAGATGGTCAGCCCGTGCAGCTGGA...CCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTGGTCCCCTGAGGTCTTaGAGGCTTTGCTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPGPLRS*RLCCTA
Trigger: AGCTGTGCAGCAAAGCCTTCAAGACCTCAGGGGACC...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp GGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTGGTTTCTGCAGGTCCCCTaGGGTCTTGAAGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: GVDRAGIISCQGRDAGVWFLQVP*GLEGFA
Trigger: AGCAAAGCCTTCAAGACCTCAGGGGACCTGCAGAAA...CCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCCTGGGTGTATGTAGGCCATaGTGCCGTCTTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GPHLGCSPQTFPLEAIFLGVCRP*CRLPAA
Trigger: TGCAGCTGGAAGACGGCAGCATGGCCTACATACACC...CAGGAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTACCTTGCTGGCATACTaGTCCAGGGCCACCACTGTG +
Preference number: 4 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPTLLAY*SRATTV
Trigger: CACAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGT...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp TCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTATGCGGCCATGCACGTGTAGGGCTTaGAATGTGTGTGCACCACGT +
Preference number: 4 (lower is better)
Translates to: STRGHFPVASSPLRPMRPCTCRA*NVCAPR
Trigger: ACGTGGTGCACACACATTGCAAGCCCTACACGTGCA...TGGCCGCATAGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp GACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTGGCAGCCTTTTGCCGGTAGGTCTTaGCACAGCTACTGCACGTGT +
Preference number: 4 (lower is better)
Translates to: DRAGIISCQGRDAGVWQPFAGRS*HSYCTC
Trigger: ACACGTGCAGTAGCTGTGGCAAGACCTACCGGCAAA...AGGCTGCCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTGTCACAGCCCCTTGCTaGATAGCAGCAGTGGCTACG +
Preference number: 4 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPVTAPC*IAAVAT
Trigger: CGTAGCCACTGCTGCTATGCAGCAAGGGGCTGTGAC...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp AGCGAAGAGGCACCTTCACTCCAGCCACAGGCCCCTGAGGAATTAATTCTGACTCGTGCAGAACCTTGCTaGCATACTGCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SEEAPSLQPQAPEELILTRAEPC*HTAPGP
Trigger: TGGCCCTGGAGCAGTATGCCAGCAAGGTTCTGCACG...AGTCAGAATTAATTCCTCAGGGGCCTGTGGCTGGAGTGAAGGTGCCTCTTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTCACAGGCCTTTCCACAGCTaGGAAAGTCACACCTGTATG +
Preference number: 4 (lower is better)
Translates to: VQATRLPLCHRQAKRHLHRPFHS*ESHTCM
Trigger: CATACAGGTGTGACTTTCCCAGCTGTGGAAAGGCCT...GTGAAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTGGGCTGCACAGCTCCTCTaGGCACTTGTATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GVDRAGIISCQGRDAGVWAAQLL*ALVWFL
Trigger: GAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGC...CCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp AGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACTACTTGGGTTGGGATaGCACTGCTCTCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SLGTGHSLASLPQTSEEALLGLG*HCSLPS
Trigger: TGAAGGAAGAGAGCAGTGCCATCCCAACCCAAGTAG...TGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp AGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCACCATGGCTACTTaGGTTGGGATGGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: RKGVDRAGIISCQGRDAGVTMAT*VGMALL
Trigger: GAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGAC...ACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CCCCAGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCTGTGTGTGCCAGATGTaGCTAGTTCTTCATGATGAC +
Preference number: 4 (lower is better)
Translates to: PQETVIAGRRWAESCRPFCVCQM*LVLHDD
Trigger: GTCATCATGAAGAACTAGCCACATCTGGCACACACA...GAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
CDS-3UTR CCA 90 bp CAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGTGTGTGTGCCAGATGTaGCTAGTTCTTCATGATGAC +
Preference number: 4 (lower is better)
Translates to: QPGDQAQCRLPAAWPSSWCVCQM*LVLHDD
Trigger: GTCATCATGAAGAACTAGCCACATCTGGCACACACA...CCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
CDS-3UTR TCA 90 bp ACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGTCCAGCTGCACGGGCTaGCCATCTTCAAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: TTSLRKGVDRAGIISCQGSSCTG*PSSKEK
Trigger: TTTCTCCTTTGAAGATGGTCAGCCCGTGCAGCTGGA...CCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp CACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGTCCAGCTGCACGGGCTaGCCATCTTCAAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: HHLPEEGSGQSRNNILPRSSCTG*PSSKEK
Trigger: TTTCTCCTTTGAAGATGGTCAGCCCGTGCAGCTGGA...CCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp ACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGTACCTTGCGGATATTTaGTGTGGTGAAGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: TTSLRKGVDRAGIISCQGYLADI*CGEGAA
Trigger: GGCCGCTCCTTCACCACATCAAATATCCGCAAGGTA...CCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGATATCGTGCAGAACCTTaGTGGCATACTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LPEEGSGQSRNNILPREGYRAEP*WHTAPG
Trigger: CCCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATA...TCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATAGGGTGGTGCTGCCGTaGTGTGTCACCACACTGATG +
Preference number: 4 (lower is better)
Translates to: LGCSPQTFPLEAIFLLPHRVVLP*CVTTLM
Trigger: CATCAGTGTGGTGACACAGCACGGCAGCACCACCCT...ATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233841.2
CDS-3UTR GCA 90 bp CTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATGTCACAGCCCCTTGCTaGATAGCAGCAGTGGCTACG +
Preference number: 4 (lower is better)
Translates to: LGCSPQTFPLEAIFLLPHVTAPC*IAAVAT
Trigger: CGTAGCCACTGCTGCTATGCAGCAAGGGGCTGTGAC...ATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp AGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGATGGATGTAGGCAGTaGAACCGTCTTCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RKGVDRAGIISCQGRDAGDGCRQ*NRLPAG
Trigger: TCCAGCTGGAAGACGGTTCCACTGCCTACATCCATC...ACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTGGCAGCCTTTAAGTGATGGGCAGTaGTGTAGAGACGACCACAGC +
Preference number: 4 (lower is better)
Translates to: DRAGIISCQGRDAGVWQPLSDGQ*CRDDHS
Trigger: GCTGTGGTCGTCTCTACACCACTGCCCATCACTTAA...AGGCTGCCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTGTCACCATGGCTACTTaGGTTGGGATGGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPVTMAT*VGMALL
Trigger: GAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGAC...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR TCA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTTACCTTGCGGATATTTaGTGTGGTGAAGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPYLADI*CGEGAA
Trigger: GGCCGCTCCTTCACCACATCAAATATCCGCAAGGTA...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp AGCGAAGAGGCACCTTCACTCCAGCCACAGGCCCCTGAGGAATTAATTCTGACTTATCGTGCAGAACCTTaGTGGCATACTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SEEAPSLQPQAPEELILTYRAEP*WHTAPG
Trigger: CCCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATA...AGTCAGAATTAATTCCTCAGGGGCCTGTGGCTGGAGTGAAGGTGCCTCTTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp AGCGAAGAGGCACCTTCACTCCAGCCACAGGCCCCTGAGGAATTAATTCTGACTTGCACGTGTAGGGCTTaGAATGTGTGTGCACCACGT +
Preference number: 4 (lower is better)
Translates to: SEEAPSLQPQAPEELILTCTCRA*NVCAPR
Trigger: ACGTGGTGCACACACATTGCAAGCCCTACACGTGCA...AGTCAGAATTAATTCCTCAGGGGCCTGTGGCTGGAGTGAAGGTGCCTCTTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp CCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCTCTTGCCACAGCTACTaGACGTGTAGGGCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: PGPHLGCSPQTFPLEAIFSCHSY*TCRACN
Trigger: ATTGCAAGCCCTACACGTGCAGTAGCTGTGGCAAGA...GAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTGATGGATGTAGGCAGTaGAACCGTCTTCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPDGCRQ*NRLPAG
Trigger: TCCAGCTGGAAGACGGTTCCACTGCCTACATCCATC...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGATTAAGTGATGGGCAGTaGTGTAGAGACGACCACAGC +
Preference number: 4 (lower is better)
Translates to: LPEEGSGQSRNNILPREGLSDGQ*CRDDHS
Trigger: GCTGTGGTCGTCTCTACACCACTGCCCATCACTTAA...TCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp AGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTTTAAGTGATGGGCAGTaGTGTAGAGACGACCACAGC +
Preference number: 4 (lower is better)
Translates to: RKGVDRAGIISCQGRDAGLSDGQ*CRDDHS
Trigger: GCTGTGGTCGTCTCTACACCACTGCCCATCACTTAA...ACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp GAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTAGGCCTTTCCACAGCTaGGAAAGTCACACCTGTATG +
Preference number: 4 (lower is better)
Translates to: EGSGQSRNNILPREGRRCRPFHS*ESHTCM
Trigger: CATACAGGTGTGACTTTCCCAGCTGTGGAAAGGCCT...ACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGAGGCCTTTCCACAGCTaGGAAAGTCACACCTGTATG +
Preference number: 4 (lower is better)
Translates to: HHLPEEGSGQSRNNILPRRPFHS*ESHTCM
Trigger: CATACAGGTGTGACTTTCCCAGCTGTGGAAAGGCCT...CCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp AGCGAAGAGGCACCTTCACTCCAGCCACAGGCCCCTGAGGAATTAATTCTGACTTGTGTGTGCACCACGTaGTGTTTGTACAGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: SEEAPSLQPQAPEELILTCVCTT*CLYRLE
Trigger: CTCGAGCCTGTACAAACACCACGTGGTGCACACACA...AGTCAGAATTAATTCCTCAGGGGCCTGTGGCTGGAGTGAAGGTGCCTCTTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR GCA 90 bp AGCGAAGAGGCACCTTCACTCCAGCCACAGGCCCCTGAGGAATTAATTCTGACTTCTTGCCACAGCTACTaGACGTGTAGGGCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: SEEAPSLQPQAPEELILTSCHSY*TCRACN
Trigger: ATTGCAAGCCCTACACGTGCAGTAGCTGTGGCAAGA...AGTCAGAATTAATTCCTCAGGGGCCTGTGGCTGGAGTGAAGGTGCCTCTTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATTGTGTGTGCACCACGTaGTGTTTGTACAGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: LGCSPQTFPLEAIFLLPHCVCTT*CLYRLE
Trigger: CTCGAGCCTGTACAAACACCACGTGGTGCACACACA...ATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CCA 90 bp CACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGTGTGTGTGCCAGATGTaGCTAGTTCTTCATGATGAC +
Preference number: 4 (lower is better)
Translates to: HHLPEEGSGQSRNNILPRCVCQM*LVLHDD
Trigger: GTCATCATGAAGAACTAGCCACATCTGGCACACACA...CCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
CDS-3UTR CCA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTTGTGTGTGCCAGATGTaGCTAGTTCTTCATGATGAC +
Preference number: 4 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPCVCQM*LVLHDD
Trigger: GTCATCATGAAGAACTAGCCACATCTGGCACACACA...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
CDS-3UTR TCA 90 bp TGTGAGTACGAACATGACTTTTTAGCCCATAGCCTGTTGCAAAGGCCTTTCCACTCCAGCTGCACGGGCTaGCCATCTTCAAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: CEYEHDFLAHSLLQRPFHSSCTG*PSSKEK
Trigger: TTTCTCCTTTGAAGATGGTCAGCCCGTGCAGCTGGA...GTGGAAAGGCCTTTGCAACAGGCTATGGGCTAAAAAGTCATGTTCGTACTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
CDS GCA 90 bp TCAGCAGCAGAGGCGGCCTCCAGCTGCTGCTGCTCATACAGGGCCTaGTCGCTCTCCTCCGTGGCCTCCAGCTCCCCGTGTGCGCTGCGC +
Preference number: 5 (lower is better)
Translates to: SAAEAASSCCCSYRA*SLSSVASSSPCALR
Trigger: GCGCAGCGCACACGGGGAGCTGGAGGCCACGGAGGAGAGCGAGCAGGCCCTGTATGAGCAGCAGCAGCTGGAGGCCGCCTCTGCTGCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000133868.2
ENSMUST00000232845.2
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS CCA 90 bp TCTCCTCCGTGGCCTCCAGCTCCCCGTGTGCGCTGCGCTTGTGCATaGCCAGGGTGGAGGTTTGCCGGTAGGTCTTGCCACAGCTACTGC +
Preference number: 5 (lower is better)
Translates to: SPPWPPAPRVRCACA*PGWRFAGRSCHSYC
Trigger: GCAGTAGCTGTGGCAAGACCTACCGGCAAACCTCCACCCTGGCCATGCACAAGCGCAGCGCACACGGGGAGCTGGAGGCCACGGAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000133868.2
ENSMUST00000232845.2
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTGCGATGTGTGTTCCGTaGGCTGTGGCCAACAGCGCC +
Preference number: 5 (lower is better)
Translates to: VSGSLVTKLSVDCLLPGPAMCVP*AVANSA
Trigger: GGCGCTGTTGGCCACAGCCAACGGAACACACATCGC...AGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp CCGAAGCCTTCCTCGTCTTCCGCTGCCAGGTCCTCCAAGCCCGCCTCCGTCTGCCTCCAGCTGGATCACTaGCCCTTCAAGCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: PKPSSSSAARSSKPASVCLQLDH*PFKQLL
Trigger: GAGAAGCTGCTTGAAGGGCAAGTGATCCAGCTGGAG...GCAGACGGAGGCGGGCTTGGAGGACCTGGCAGCGGAAGACGAGGAAGGCTTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161275.3
CDS-3UTR CAA 90 bp CCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGGTTAGGCCAGGGTGGAGGTTaGCCGGTAGGTCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: PWCQVARHLGHRSPRRRLGQGGG*PVGLAT
Trigger: TGTGGCAAGACCTACCGGCAAACCTCCACCCTGGCC...TAACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGAGGCCAGGGTGGAGGTTaGCCGGTAGGTCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: GSPWCQVARHLGHRSPRRGQGGG*PVGLAT
Trigger: TGTGGCAAGACCTACCGGCAAACCTCCACCCTGGCC...TCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp CAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGCAGGGTCACAGCCCCTaGCTGCATAGCAGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: QPGDQAQCRLPAAWPSSWQGHSP*LHSSSG
Trigger: GCCACTGCTGCTATGCAGCAAGGGGCTGTGACCCTG...CCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp CGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTCAGGGTCACAGCCCCTaGCTGCATAGCAGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: RLLLGGAGLKAVGLSPGGQGHSP*LHSSSG
Trigger: GCCACTGCTGCTATGCAGCAAGGGGCTGTGACCCTG...ACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS TCA 90 bp GGGCTGTATGGATGCGCACATGATTCTTGTAGTTGGTGGCGCTGGTaGAGCCACGACCACAGTGGGGCTCGGGGCAGGTGTAGGGCCGCT +
Preference number: 5 (lower is better)
Translates to: GLYGCAHDSCSWWRW*SHDHSGARGRCRAA
Trigger: AGCGGCCCTACACCTGCCCCGAGCCCCACTGTGGTCGTGGCTTCACCAGCGCCACCAACTACAAGAATCATGTGCGCATCCATACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS GCA 90 bp GTGCTGCCGTGCTGTGTCACCACACTGATGGCACTCCCCAGGGCCTaGAGGTCTTCTGGGGACAGGCTGACCTGTATGGATGCGCACATG +
Preference number: 5 (lower is better)
Translates to: VLPCCVTTLMALPRA*RSSGDRLTCMDAHM
Trigger: CATGTGCGCATCCATACAGGTCAGCCTGTCCCCAGAAGACCTGCAGGCCCTGGGGAGTGCCATCAGTGTGGTGACACAGCACGGCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233841.2
CDS-3UTR CAA 90 bp GGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCCTATCGTGCAGAACCTaGCTGGCATACTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GVWQPGDQAQCRLPAAWPLSCRT*LAYCSR
Trigger: CCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATAG...GGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp TCCCCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGCCAACCTGCTGCCCTTaGCCATTGTGGGAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SPAVWVQATRLPLCHRQAPTCCP*PLWEAG
Trigger: CCCTGCTTCCCACAATGGCAAAGGGCAGCAGGTTGG...CGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp CTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTGGCCAGGGTGGAGGTTaGCCGGTAGGTCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: LVTKLSVDCLLPGPHLGCGQGGG*PVGLAT
Trigger: TGTGGCAAGACCTACCGGCAAACCTCCACCCTGGCC...ACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp ACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCAGGCCAGGGTGGAGGTTaGCCGGTAGGTCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: TKLSVDCLLPGPHLGCSPGQGGG*PVGLAT
Trigger: TGTGGCAAGACCTACCGGCAAACCTCCACCCTGGCC...TGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp TTCTGGGGACAGGCTGACCTGCTGGGTACCGTCCTGAGTGATCAGAGCCACCTGGGCCAGGGTGGAGGTTaGCCGGTAGGTCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: FWGQADLLGTVLSDQSHLGQGGG*PVGLAT
Trigger: TGTGGCAAGACCTACCGGCAAACCTCCACCCTGGCC...CAGGTGGCTCTGATCACTCAGGACGGTACCCAGCAGGTCAGCCTGTCCCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR CAA 90 bp TCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACGGCCAGGGTGGAGGTTaGCCGGTAGGTCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: STACCLALILGVAHRPFHGQGGG*PVGLAT
Trigger: TGTGGCAAGACCTACCGGCAAACCTCCACCCTGGCC...GTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGGTCAACAGCGCCACCTGTaGGTGATGAAGAGACGCCAC +
Preference number: 5 (lower is better)
Translates to: VPGAKWLGILATVAPGDGQQRHL*VMKRRH
Trigger: GTGGCGTCTCTTCATCACCAACAGGTGGCGCTGTTG...ACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACGCGATGTGTGTTCCGTaGGCTGTGGCCAACAGCGCC +
Preference number: 5 (lower is better)
Translates to: VWVQATRLPLCHRQAKRHAMCVP*AVANSA
Trigger: GGCGCTGTTGGCCACAGCCAACGGAACACACATCGC...GTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS TCA 90 bp GACCTGTATGGATGCGCACATGATTCTTGTAGTTGGTGGCGCTGGTaGAGCCACGACCACAGTGGGGCTCGGGGCAGGTGTAGGGCCGCT +
Preference number: 5 (lower is better)
Translates to: DLYGCAHDSCSWWRW*SHDHSGARGRCRAA
Trigger: AGCGGCCCTACACCTGCCCCGAGCCCCACTGTGGTCGTGGCTTCACCAGCGCCACCAACTACAAGAATCATGTGCGCATCCATACAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233841.2
CDS CCA 90 bp CTTCCAGCTGGACAGCTTCCAGGGCGCTGGGGTCACAGCCCTCTTTaGGTGTGTGGTGTATGTAGGCCATGCTGCCGTCTTCCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: LPAGQLPGRWGHSPL*VCGVCRPCCRLPAA
Trigger: TGCAGCTGGAAGACGGCAGCATGGCCTACATACACCACACACCCAAAGAGGGCTGTGACCCCAGCGCCCTGGAAGCTGTCCAGCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGGTCTCCAGCTGGATCACTaGCCCTTCAAGCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: VPGAKWLGILATVAPGDGLQLDH*PFKQLL
Trigger: GAGAAGCTGCTTGAAGGGCAAGTGATCCAGCTGGAG...ACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp CCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGGTTATGCTGCCCTTTGCCATaGTGGGAAGCAGGGCTATCG +
Preference number: 5 (lower is better)
Translates to: PWCQVARHLGHRSPRRRLCCPLP*WEAGLS
Trigger: CGATAGCCCTGCTTCCCACAATGGCAAAGGGCAGCA...TAACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp CCCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAACCAACCTGCTGCCCTTaGCCATTGTGGGAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: PSSLGTGHSLASLPQTSEPTCCP*PLWEAG
Trigger: CCCTGCTTCCCACAATGGCAAAGGGCAGCAGGTTGG...TTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp ACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACCAACCTGCTGCCCTTaGCCATTGTGGGAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: TKLSVDCLLPGPHLGCSPPTCCP*PLWEAG
Trigger: CCCTGCTTCCCACAATGGCAAAGGGCAGCAGGTTGG...TGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGACGGTAGCTCCTCTGGGCACTaGTATGGTTTCTCACCCGTG +
Preference number: 5 (lower is better)
Translates to: VPGAKWLGILATVAPGDGSSSGH*YGFSPV
Trigger: CACGGGTGAGAAACCATACAAGTGCCCAGAGGAGCT...ACCGTCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GGGACGCAGGTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGTGCACCACGTGGTGTTaGTACAGGCTCGAGTACTCC +
Preference number: 5 (lower is better)
Translates to: GTQVSGSLVTKLSVDCLLCTTWC*YRLEYS
Trigger: GGAGTACTCGAGCCTGTACAAACACCACGTGGTGCA...CAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp CACCTGAGGGGGCCCATCCTCCTCCGTCACCATGGCTACTTGGGTTGGGATGGCTGCACCACGTGGTGTTaGTACAGGCTCGAGTACTCC +
Preference number: 5 (lower is better)
Translates to: HLRGPILLRHHGYLGWDGCTTWC*YRLEYS
Trigger: GGAGTACTCGAGCCTGTACAAACACCACGTGGTGCA...GCCATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGCCCCCTCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR CAA 90 bp GGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTCAACAGCGCCACCTGTaGGTGATGAAGAGACGCCAC +
Preference number: 5 (lower is better)
Translates to: GSLVTKLSVDCLLPGPHLQQRHL*VMKRRH
Trigger: GTGGCGTCTCTTCATCACCAACAGGTGGCGCTGTTG...AAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTCACGCGATGTGTGTTCCGTaGGCTGTGGCCAACAGCGCC +
Preference number: 5 (lower is better)
Translates to: VQATRLPLCHRQAKRHLHAMCVP*AVANSA
Trigger: GGCGCTGTTGGCCACAGCCAACGGAACACACATCGC...GTGAAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS CCA 90 bp TGTAGGCAGTGGAACCGTCTTCCAGCTGGACAGCTTCCAGGGCGCTaGGGTCACAGCCCTCTTTGGGTGTGTGGTGTATGTAGGCCATGC +
Preference number: 5 (lower is better)
Translates to: CRQWNRLPAGQLPGR*GHSPLWVCGVCRPC
Trigger: GCATGGCCTACATACACCACACACCCAAAGAGGGCTGTGACCCCAGCGCCCTGGAAGCTGTCCAGCTGGAAGACGGTTCCACTGCCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp CAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGCTATCGTGCAGAACCTaGCTGGCATACTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: QPGDQAQCRLPAAWPSSWLSCRT*LAYCSR
Trigger: CCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATAG...CCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTCTGCTGCCCTTTGCCATaGTGGGAAGCAGGGCTATCG +
Preference number: 5 (lower is better)
Translates to: GYRPLACLSATDKRRGTFCCPLP*WEAGLS
Trigger: CGATAGCCCTGCTTCCCACAATGGCAAAGGGCAGCA...GAAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp CTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTTGCTGCCCTTTGCCATaGTGGGAAGCAGGGCTATCG +
Preference number: 5 (lower is better)
Translates to: LVTKLSVDCLLPGPHLGCCCPLP*WEAGLS
Trigger: CGATAGCCCTGCTTCCCACAATGGCAAAGGGCAGCA...ACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GTGTCTGGCAGCCTGGTGACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTTTAGCCCATAGCCTGTaGCAAAGGCCTTTCCACAGC +
Preference number: 5 (lower is better)
Translates to: VSGSLVTKLSVDCLLPGPLAHSL*QRPFHS
Trigger: GCTGTGGAAAGGCCTTTGCAACAGGCTATGGGCTAA...AGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GCTGACCTGCTGGGTACCGTCCTGAGTGATCAGAGCCACCTGAGGGGGCCCATCTTAGCCCATAGCCTGTaGCAAAGGCCTTTCCACAGC +
Preference number: 5 (lower is better)
Translates to: ADLLGTVLSDQSHLRGPILAHSL*QRPFHS
Trigger: GCTGTGGAAAGGCCTTTGCAACAGGCTATGGGCTAA...GATGGGCCCCCTCAGGTGGCTCTGATCACTCAGGACGGTACCCAGCAGGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR CAA 90 bp CGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTAGCTCCTCTGGGCACTaGTATGGTTTCTCACCCGTG +
Preference number: 5 (lower is better)
Translates to: RLLLGGAGLKAVGLSPGGSSSGH*YGFSPV
Trigger: CACGGGTGAGAAACCATACAAGTGCCCAGAGGAGCT...ACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp ACCGGGGATGGTGAGGGTGGTGCTGCCGTGCTGTGTCACCACACTGATGGCACTAGCTCCTCTGGGCACTaGTATGGTTTCTCACCCGTG +
Preference number: 5 (lower is better)
Translates to: TGDGEGGAAVLCHHTDGTSSSGH*YGFSPV
Trigger: CACGGGTGAGAAACCATACAAGTGCCCAGAGGAGCT...AGTGCCATCAGTGTGGTGACACAGCACGGCAGCACCACCCTCACCATCCCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232845.2
CDS-3UTR CAA 90 bp GGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGAAGCTCCTCTGGGCACTaGTATGGTTTCTCACCCGTG +
Preference number: 5 (lower is better)
Translates to: GSPWCQVARHLGHRSPRRSSSGH*YGFSPV
Trigger: CACGGGTGAGAAACCATACAAGTGCCCAGAGGAGCT...TCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp TCCCCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAGCTCCTCTGGGCACTaGTATGGTTTCTCACCCGTG +
Preference number: 5 (lower is better)
Translates to: SPAVWVQATRLPLCHRQASSSGH*YGFSPV
Trigger: CACGGGTGAGAAACCATACAAGTGCCCAGAGGAGCT...CGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GGAAGTCCCTGGTGCCAAGTGGCTAGGCATCTTGGCCACCGTAGCCCCAGGAGATGCACCACGTGGTGTTaGTACAGGCTCGAGTACTCC +
Preference number: 5 (lower is better)
Translates to: GSPWCQVARHLGHRSPRRCTTWC*YRLEYS
Trigger: GGAGTACTCGAGCCTGTACAAACACCACGTGGTGCA...TCTCCTGGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp AGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACAACAGCGCCACCTGTaGGTGATGAAGAGACGCCAC +
Preference number: 5 (lower is better)
Translates to: SSVSTACCLALILGVAHRQQRHL*VMKRRH
Trigger: GTGGCGTCTCTTCATCACCAACAGGTGGCGCTGTTG...TCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACGCAGGTGTCTGGCAGGGTCACAGCCCCTaGCTGCATAGCAGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: GVDRAGIISCQGRDAGVWQGHSP*LHSSSG
Trigger: GCCACTGCTGCTATGCAGCAAGGGGCTGTGACCCTG...CCAGACACCTGCGTCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp ACCAAGCTCAGTGTCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACTCCAGCTGGATCACTaGCCCTTCAAGCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: TKLSVDCLLPGPHLGCSPLQLDH*PFKQLL
Trigger: GAGAAGCTGCTTGAAGGGCAAGTGATCCAGCTGGAG...TGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp AGGAGACGGTTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTCTATCGTGCAGAACCTaGCTGGCATACTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RRRLLLGGAGLKAVGLSPLSCRT*LAYCSR
Trigger: CCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATAG...AGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp TCGACTGCCTGCTGCCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACCTATCGTGCAGAACCTaGCTGGCATACTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: STACCLALILGVAHRPFHLSCRT*LAYCSR
Trigger: CCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATAG...GTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGGCAGCAGGCAGTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp TTATTGCTGGGAGGCGCTGGGCTGAAAGCTGTCGGCCTTTCCCCTGGTGGTACTTGCTGCCCTTTGCCATaGTGGGAAGCAGGGCTATCG +
Preference number: 5 (lower is better)
Translates to: LLLGGAGLKAVGLSPGGTCCPLP*WEAGLS
Trigger: CGATAGCCCTGCTTCCCACAATGGCAAAGGGCAGCA...AGTACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp TGGTGTGGGAGCTGGTCCTCTTGGGCTCAGCAGCCGCTCTCTGTGGTTTCCAGGTTAGCCCATAGCCTGTaGCAAAGGCCTTTCCACAGC +
Preference number: 5 (lower is better)
Translates to: WCGSWSSWAQQPLSVVSRLAHSL*QRPFHS
Trigger: GCTGTGGAAAGGCCTTTGCAACAGGCTATGGGCTAA...CCTGGAAACCACAGAGAGCGGCTGCTGAGCCCAAGAGGACCAGCTCCCACACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233841.2
CDS-3UTR CAA 90 bp CCCAGCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAATGCACCACGTGGTGTTaGTACAGGCTCGAGTACTCC +
Preference number: 5 (lower is better)
Translates to: PSSLGTGHSLASLPQTSECTTWC*YRLEYS
Trigger: GGAGTACTCGAGCCTGTACAAACACCACGTGGTGCA...TTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp CTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGACAGGGTCACAGCCCCTaGCTGCATAGCAGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: LPEEGSGQSRNNILPREGQGHSP*LHSSSG
Trigger: GCCACTGCTGCTATGCAGCAAGGGGCTGTGACCCTG...TCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS TCA 90 bp CGCCTGTGTGGGTCCGCACGTGTTTCTGCAGGTCCCCTGAGGTCTTaGAGGCTTTGCTGCACAGCTCCTCTGGGCACTTGTATGGTTTCT +
Preference number: 5 (lower is better)
Translates to: RLCGSARVSAGPLRS*RLCCTAPLGTCMVS
Trigger: AGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGCAAAGCCTTCAAGACCTCAGGGGACCTGCAGAAACACGTGCGGACCCACACAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133868.2
CDS GCA 90 bp GCATGGCCAGGGTGGAGGTTTGCCGGTAGGTCTTGCCACAGCTACTaGACGTGTAGGGCTTGCAATGTGTGTGCACCACGTGGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: AWPGWRFAGRSCHSY*TCRACNVCAPRGVC
Trigger: ACAAACACCACGTGGTGCACACACATTGCAAGCCCTACACGTGCAGTAGCTGTGGCAAGACCTACCGGCAAACCTCCACCCTGGCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000133868.2
ENSMUST00000232845.2
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS CCA 90 bp GAGGGGGCCCATCCTCCTCCGTCACCATGGCTACTTGGGTTGGGATaGCACTGCTCTCTTCCTTCACTTCCGAAAGGTAAGCAATGTGGG +
Preference number: 5 (lower is better)
Translates to: EGAHPPPSPWLLGLG*HCSLPSLPKGKQCG
Trigger: CCCACATTGCTTACCTTTCGGAAGTGAAGGAAGAGAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000155030.2
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp CTGAGTCTGCGTGCCATCAGCGCTGACCATGGTGACCGTGTGTGTGCCAGATGTCTCCAGCTGGATCACTaGCCCTTCAAGCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: LSLRAISADHGDRVCARCLQLDH*PFKQLL
Trigger: GAGAAGCTGCTTGAAGGGCAAGTGATCCAGCTGGAG...ACATCTGGCACACACACGGTCACCATGGTCAGCGCTGATGGCACGCAGACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233841.2
CDS-3UTR CAA 90 bp CCTGGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCCCAACCTGCTGCCCTTaGCCATTGTGGGAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: PGPHLGCSPQTFPLEAIFPTCCP*PLWEAG
Trigger: CCCTGCTTCCCACAATGGCAAAGGGCAGCAGGTTGG...GAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GCAGTCTGGGTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGTTAGCCCATAGCCTGTaGCAAAGGCCTTTCCACAGC +
Preference number: 5 (lower is better)
Translates to: AVWVQATRLPLCHRQAKRLAHSL*QRPFHS
Trigger: GCTGTGGAAAGGCCTTTGCAACAGGCTATGGGCTAA...CCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCCAGACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GTACAGGCCACTCGCTTGCCTCTCTGCCACAGACAAGCGAAGAGGCACCTTCACTGCACCACGTGGTGTTaGTACAGGCTCGAGTACTCC +
Preference number: 5 (lower is better)
Translates to: VQATRLPLCHRQAKRHLHCTTWC*YRLEYS
Trigger: GGAGTACTCGAGCCTGTACAAACACCACGTGGTGCA...GTGAAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp AGCGAAGAGGCACCTTCACTCCAGCCACAGGCCCCTGAGGAATTAATTCTGACTGCGATGTGTGTTCCGTaGGCTGTGGCCAACAGCGCC +
Preference number: 5 (lower is better)
Translates to: SEEAPSLQPQAPEELILTAMCVP*AVANSA
Trigger: GGCGCTGTTGGCCACAGCCAACGGAACACACATCGC...AGTCAGAATTAATTCCTCAGGGGCCTGTGGCTGGAGTGAAGGTGCCTCTTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS GCA 90 bp TGGGGTCACAGCCCTCTTTGGGTGTGTGGTGTATGTAGGCCATGCTaGCGTCTTCCAGCTGCACGGGCTGACCATCTTCAAAGGAGAAAG +
Preference number: 5 (lower is better)
Translates to: WGHSPLWVCGVCRPC*RLPAARADHLQRRK
Trigger: CTTTCTCCTTTGAAGATGGTCAGCCCGTGCAGCTGGAAGACGGCAGCATGGCCTACATACACCACACACCCAAAGAGGGCTGTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS CCA 90 bp CACCTGAGGGGGCCCATCCTCCTCCGTCACCATGGCTACTTGGGTTaGGATGGCACTGCTCTCTTCCTTCACTTCCGAAAGGTAAGCAAT +
Preference number: 5 (lower is better)
Translates to: HLRGPILLRHHGYLG*DGTALFLHFRKVSN
Trigger: ATTGCTTACCTTTCGGAAGTGAAGGAAGAGAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGCCCCCTCAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000155030.2
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp GGCCCTCATCTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCCTGTGCTGCCCTTTGCCATaGTGGGAAGCAGGGCTATCG +
Preference number: 5 (lower is better)
Translates to: GPHLGCSPQTFPLEAIFLCCPLP*WEAGLS
Trigger: CGATAGCCCTGCTTCCCACAATGGCAAAGGGCAGCA...CAGGAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAGATGAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp ACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGCTCCAGCTGGATCACTaGCCCTTCAAGCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: TTSLRKGVDRAGIISCQGLQLDH*PFKQLL
Trigger: GAGAAGCTGCTTGAAGGGCAAGTGATCCAGCTGGAG...CCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp ACCACCTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGCTATCGTGCAGAACCTaGCTGGCATACTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TTSLRKGVDRAGIISCQGLSCRT*LAYCSR
Trigger: CCTGGAGCAGTATGCCAGCAAGGTTCTGCACGATAG...CCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp CTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCCAACCTGCTGCCCTTaGCCATTGTGGGAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: LGCSPQTFPLEAIFLLPHPTCCP*PLWEAG
Trigger: CCCTGCTTCCCACAATGGCAAAGGGCAGCAGGTTGG...ATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTCAACAGCGCCACCTGTaGGTGATGAAGAGACGCCAC +
Preference number: 5 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPQQRHL*VMKRRH
Trigger: GTGGCGTCTCTTCATCACCAACAGGTGGCGCTGTTG...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS GCA 90 bp AGGTTTGCCGGTAGGTCTTGCCACAGCTACTGCACGTGTAGGGCTTaGAATGTGTGTGCACCACGTGGTGTTTGTACAGGCTCGAGTACT +
Preference number: 5 (lower is better)
Translates to: RFAGRSCHSYCTCRA*NVCAPRGVCTGSST
Trigger: AGTACTCGAGCCTGTACAAACACCACGTGGTGCACACACATTGCAAGCCCTACACGTGCAGTAGCTGTGGCAAGACCTACCGGCAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000133868.2
ENSMUST00000232845.2
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS GCA 90 bp GCCCATCCTCCTCCGTCACCATGGCTACTTGGGTTGGGATGGCACTaGTCTCTTCCTTCACTTCCGAAAGGTAAGCAATGTGGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: AHPPPSPWLLGLGWH*SLPSLPKGKQCGLV
Trigger: AACCAACCCACATTGCTTACCTTTCGGAAGTGAAGGAAGAGAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000155030.2
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp CTCCCTGAGGAAGGGAGTGGACAGAGCAGGAATAATATCCTGCCAAGGGAGGGATTAGCCCATAGCCTGTaGCAAAGGCCTTTCCACAGC +
Preference number: 5 (lower is better)
Translates to: LPEEGSGQSRNNILPREGLAHSL*QRPFHS
Trigger: GCTGTGGAAAGGCCTTTGCAACAGGCTATGGGCTAA...TCCCTCCCTTGGCAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTAGCTCCTCTGGGCACTaGTATGGTTTCTCACCCGTG +
Preference number: 5 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPSSSGH*YGFSPV
Trigger: CACGGGTGAGAAACCATACAAGTGCCCAGAGGAGCT...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp ACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATCACCCCTGAGGCCTTGCACCACGTGGTGTTaGTACAGGCTCGAGTACTCC +
Preference number: 5 (lower is better)
Translates to: TDLSTRGHFPVASSPLRPCTTWC*YRLEYS
Trigger: GGAGTACTCGAGCCTGTACAAACACCACGTGGTGCA...AGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS CCA 90 bp AGGAGAAAGACTCTTTCTGTATCGTCACCTGGTGAATGTACGCAGTaGTCCCGTCCTCCAGCTGGATCACTTGCCCTTCAAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: RRKTLSVSSPGECTQ*SRPPAGSLALQAAS
Trigger: AGAAGCTGCTTGAAGGGCAAGTGATCCAGCTGGAGGACGGGACCACTGCGTACATTCACCAGGTGACGATACAGAAAGAGTCTTTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000161275.3
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS-3UTR CAA 90 bp CTTGGGTGTAGCCCACAGACCTTTCCACTAGAGGCCATTTTCCTGTTGCCTCATTTAGCCCATAGCCTGTaGCAAAGGCCTTTCCACAGC +
Preference number: 5 (lower is better)
Translates to: LGCSPQTFPLEAIFLLPHLAHSL*QRPFHS
Trigger: GCTGTGGAAAGGCCTTTGCAACAGGCTATGGGCTAA...ATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS CCA 72 bp TGGCCTCCAGCTCCCCGTGTGCGCTGCGCTTGTGCATaGCCAGGGTGGAGGTTTGCCGGTAGGTCTTGCCAC +
Preference number: 6 (lower is better)
Translates to: WPPAPRVRCACA*PGWRFAGRSCH
Trigger: GTGGCAAGACCTACCGGCAAACCTCCACCCTGGCCATGCACAAGCGCAGCGCACACGGGGAGCTGGAGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000133868.2
ENSMUST00000232845.2
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS GCA 72 bp GAGGCGGCTAGGAAAAGAGAGCCCTCCAGCTGCTGCTaGTCATACAGGGCCTGCTCGCTCTCCTCCGTGGCC +
Preference number: 6 (lower is better)
Translates to: EAARKREPSSCC*SYRACSLSSVA
Trigger: GGCCACGGAGGAGAGCGAGCAGGCCCTGTATGAGCAGCAGCAGCTGGAGGGCTCTCTTTTCCTAGCCGCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155030.2
CDS CCA 72 bp TGGAACCGTCTTCCAGCTGGACAGCTTCCAGGGCGCTaGGGTCACAGCCCTCTTTGGGTGTGTGGTGTATGT +
Preference number: 6 (lower is better)
Translates to: WNRLPAGQLPGR*GHSPLWVCGVC
Trigger: ACATACACCACACACCCAAAGAGGGCTGTGACCCCAGCGCCCTGGAAGCTGTCCAGCTGGAAGACGGTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS CAA 72 bp CTGAGGGGGCCCATCCTCCTCCGTCACCATGGCTACTaGGGTTGGGATGGCACTGCTCTCTTCCTTCACTTC +
Preference number: 6 (lower is better)
Translates to: LRGPILLRHHGY*GWDGTALFLHF
Trigger: GAAGTGAAGGAAGAGAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGCCCCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000155030.2
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS CAA 90 bp CAGAGCCACCTGAGGGGGCCCATCCTCCTCCGTCACCATGGCTACTaGGGTTGGGATGGCACTGCTCTCTTCCTTCACTTCCGAAAGGTA +
Preference number: 6 (lower is better)
Translates to: QSHLRGPILLRHHGY*GWDGTALFLHFRKV
Trigger: TACCTTTCGGAAGTGAAGGAAGAGAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGCCCCCTCAGGTGGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000155030.2
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS CAA 90 bp CCACCTGAGGGGGCCCATCCTCCTCCGTCACCATGGCTACTTGGGTaGGGATGGCACTGCTCTCTTCCTTCACTTCCGAAAGGTAAGCAA +
Preference number: 6 (lower is better)
Translates to: PPEGAHPPPSPWLLG*GWHCSLPSLPKGKQ
Trigger: TTGCTTACCTTTCGGAAGTGAAGGAAGAGAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGCCCCCTCAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000155030.2
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS GCA 72 bp ATGTACGCAGTGGTCCCGTCCTCCAGCTGGATCACTTaGCCTTCAAGCAGCTTCTCCCCTTTGACAGCCTGC +
Preference number: 6 (lower is better)
Translates to: MYAVVPSSSWIT*PSSSFSPLTAC
Trigger: GCAGGCTGTCAAAGGGGAGAAGCTGCTTGAAGGGCAAGTGATCCAGCTGGAGGACGGGACCACTGCGTACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000161275.3
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS GCA 72 bp GGGTGGAGGTTTGCCGGTAGGTCTTGCCACAGCTACTaGACGTGTAGGGCTTGCAATGTGTGTGCACCACGT +
Preference number: 6 (lower is better)
Translates to: GWRFAGRSCHSY*TCRACNVCAPR
Trigger: ACGTGGTGCACACACATTGCAAGCCCTACACGTGCAGTAGCTGTGGCAAGACCTACCGGCAAACCTCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000133868.2
ENSMUST00000232845.2
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS CCA 72 bp GGGCCCATCCTCCTCCGTCACCATGGCTACTTGGGTTaGGATGGCACTGCTCTCTTCCTTCACTTCCGAAAG +
Preference number: 6 (lower is better)
Translates to: GPILLRHHGYLG*DGTALFLHFRK
Trigger: CTTTCGGAAGTGAAGGAAGAGAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000155030.2
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS GCA 72 bp AGCCCTCTTTGGGTGTGTGGTGTATGTAGGCCATGCTaGCGTCTTCCAGCTGCACGGGCTGACCATCTTCAA +
Preference number: 6 (lower is better)
Translates to: SPLWVCGVCRPC*RLPAARADHLQ
Trigger: TTGAAGATGGTCAGCCCGTGCAGCTGGAAGACGGCAGCATGGCCTACATACACCACACACCCAAAGAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS CAA 72 bp AATGTACGCAGTGGTCCCGTCCTCCAGCTGGATCACTaGCCCTTCAAGCAGCTTCTCCCCTTTGACAGCCTG +
Preference number: 6 (lower is better)
Translates to: NVRSGPVLQLDH*PFKQLLPFDSL
Trigger: CAGGCTGTCAAAGGGGAGAAGCTGCTTGAAGGGCAAGTGATCCAGCTGGAGGACGGGACCACTGCGTACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000161275.3
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS GCA 72 bp GGTAGGTCTTGCCACAGCTACTGCACGTGTAGGGCTTaGAATGTGTGTGCACCACGTGGTGTTTGTACAGGC +
Preference number: 6 (lower is better)
Translates to: GRSCHSYCTCRA*NVCAPRGVCTG
Trigger: GCCTGTACAAACACCACGTGGTGCACACACATTGCAAGCCCTACACGTGCAGTAGCTGTGGCAAGACCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000133868.2
ENSMUST00000232845.2
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS GCA 72 bp CCTCCGTCACCATGGCTACTTGGGTTGGGATGGCACTaGTCTCTTCCTTCACTTCCGAAAGGTAAGCAATGT +
Preference number: 6 (lower is better)
Translates to: PPSPWLLGLGWH*SLPSLPKGKQC
Trigger: ACATTGCTTACCTTTCGGAAGTGAAGGAAGAGAGCAGTGCCATCCCAACCCAAGTAGCCATGGTGACGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000129522.4
ENSMUST00000155030.2
ENSMUST00000233613.2
ENSMUST00000233904.2
CDS CCA 72 bp ACTCTTTCTGTATCGTCACCTGGTGAATGTACGCAGTaGTCCCGTCCTCCAGCTGGATCACTTGCCCTTCAA +
Preference number: 6 (lower is better)
Translates to: TLSVSSPGECTQ*SRPPAGSLALQ
Trigger: TTGAAGGGCAAGTGATCCAGCTGGAGGACGGGACCACTGCGTACATTCACCAGGTGACGATACAGAAAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000161275.3
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2
CDS TCA 72 bp TCAAAGGAGAAAGACTCTTTCTGTATCGTCACCTGGTaGATGTACGCAGTGGTCCCGTCCTCCAGCTGGATC +
Preference number: 6 (lower is better)
Translates to: SKEKDSFCIVTW*MYAVVPSSSWI
Trigger: GATCCAGCTGGAGGACGGGACCACTGCGTACATTCACCAGGTGACGATACAGAAAGAGTCTTTCTCCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000002318.8
ENSMUST00000073534.10
ENSMUST00000161275.3
ENSMUST00000233613.2
ENSMUST00000233841.2
ENSMUST00000233904.2