Pregenerated sensors for ZFP52 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051341Ensembl transcript IDs: ENSMUST00000079242.4, ENSMUST00000233281.2
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTCCTGGAACTGGATTCACAGTGATCTCTGTCTTCTGTGTGCTGTaGTTAAAGGCATGTACCATTTTACCTGTCATTATTATGAATGGT | + |
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Preference number: 1 (lower is better) Translates to: SPGTGFTVISVFCVL*LKACTILPVIIMNG Trigger: ACCATTCATAATAATGACAGGTAAAATGGTACATGCCTTTAATCACAGCACACAGAAGACAGAGATCACTGTGAATCCAGTTCCAGGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTCTGTGTGCTGTGATTAAAGGCATGTACCATTTTACCTGTCATTATTATTCTGATGCTCTCTTTTaGCTTATACGTGCGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: CLLCAVIKGMYHFTCHYYSDALF*LIRAPG Trigger: GCCTGGCGCACGTATAAGCCAAAAGAGAGCATCAGA...ATAATAATGACAGGTAAAATGGTACATGCCTTTAATCACAGCACACAGAAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| 3UTR CCA 72 bp | TATAATGCCAACTTCAGGGGATCTGATGCTCTCTTTTaGCTTATACGTGCGCCAGGCATACATGTAGTACAC | + |
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Preference number: 3 (lower is better) Translates to: YNANFRGSDALF*LIRAPGIHVVH Trigger: GTGTACTACATGTATGCCTGGCGCACGTATAAGCCAAAAGAGAGCATCAGATCCCCTGAAGTTGGCATTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGCTGTGATTAAAGGCATGTACCATTTTACCTGTCATTATTATGAATGGTTGCTTATCTCATTTGATTaGCAAGCAGAGAATACCAGA | + |
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Preference number: 3 (lower is better) Translates to: CAVIKGMYHFTCHYYEWLLISFD*QAENTR Trigger: TCTGGTATTCTCTGCTTGCAAATCAAATGAGATAAG...CAACCATTCATAATAATGACAGGTAAAATGGTACATGCCTTTAATCACAGCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR TCA 90 bp | TTTCTCAGGGATGGCAGAGAAGGCTCAGTAGTTAAGAGCACTGGCTGCAATTCCCTGCAGTGCCCACATTaGTATGGCTTTTCTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: FLRDGREGSVVKSTGCNSLQCPH*YGFSSM Trigger: CATGGAAGAAAAGCCATATCAATGTGGGCACTGCAG...GGAATTGCAGCCAGTGCTCTTAACTACTGAGCCTTCTCTGCCATCCCTGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR TCA 90 bp | GTTTTTGTTATAGCTTTTCTCAGGGATGGCAGAGAAGGCTCAGTAGTTAAGAGCGGCTTGAGGTGGTACTaGAGTATTTCCTGCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: VFVIAFLRDGREGSVVKSGLRWY*SISCSA Trigger: GGCACTGCAGGAAATACTTCAGTACCACCTCAAGCC...GCTCTTAACTACTGAGCCTTCTCTGCCATCCCTGAGAAAAGCTATAACAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCAGGGATGGCAGAGAAGGCTCAGTAGTTAAGAGCACTGGCTGCAATTCCGTGCCCACATTGATATaGCTTTTCTTCCATGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: FLRDGREGSVVKSTGCNSVPTLI*LFFHVN Trigger: GTTGACATGGAAGAAAAGCCATATCAATGTGGGCAC...GGAATTGCAGCCAGTGCTCTTAACTACTGAGCCTTCTCTGCCATCCCTGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR CCA 90 bp | GGTCTATGTAGTTCGGGAAGTCCTGGAACTGGATTCACAGTGATCTCTGTCTTCTCACAGTCTTTAGATTaGCAAGTGTCTTCTTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: GLCSSGSPGTGFTVISVFSQSLD*QVSSSP Trigger: CGGAGAAGAAGACACTTGCCAATCTAAAGACTGTGA...GAAGACAGAGATCACTGTGAATCCAGTTCCAGGACTTCCCGAACTACATAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR TCA 90 bp | GGTCTATGTAGTTCGGGAAGTCCTGGAACTGGATTCACAGTGATCTCTGTCTTCTCAGTGTTGAGTCTTTaGTATTGCCGAATGTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: GLCSSGSPGTGFTVISVFSVLSL*YCRMLE Trigger: TTCCAACATTCGGCAATATCAAAGACTCAACACTGA...GAAGACAGAGATCACTGTGAATCCAGTTCCAGGACTTCCCGAACTACATAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR GCA 90 bp | TTTCTCAGGGATGGCAGAGAAGGCTCAGTAGTTAAGAGCACTGGCTGCAATTCCTCATCATGTTCATCCTaGTTGTGCTCTTTCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: FLRDGREGSVVKSTGCNSSSCSS*LCSFFS Trigger: TGAAAAGAAAGAGCACAAGCAGGATGAACATGATGA...GGAATTGCAGCCAGTGCTCTTAACTACTGAGCCTTCTCTGCCATCCCTGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR TCA 90 bp | TGTCTTCTGTGTGCTGTGATTAAAGGCATGTACCATTTTACCTGTCATTATTATGCCGTATGCAGTGTTTaGTCTGTTTTAAGGCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: CLLCAVIKGMYHFTCHYYAVCSV*SVLRLD Trigger: GTCAAGCCTTAAAACAGATCAAACACTGCATACGGC...ATAATAATGACAGGTAAAATGGTACATGCCTTTAATCACAGCACACAGAAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR TCA 90 bp | TGTGCTGTGATTAAAGGCATGTACCATTTTACCTGTCATTATTATGAATGGTTGCCAGTATGCCTTCTCTaGTGGCTTTTAAGTGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: CAVIKGMYHFTCHYYEWLPVCLL*WLLSAD Trigger: ATCTGCACTTAAAAGCCATCAGAGAAGGCATACTGG...CAACCATTCATAATAATGACAGGTAAAATGGTACATGCCTTTAATCACAGCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR GCA 90 bp | GTTTTTGTTATAGCTTTTCTCAGGGATGGCAGAGAAGGCTCAGTAGTTAAGAGCATGTCAACTGTTTCTTaGATGAGACTATATAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: VFVIAFLRDGREGSVVKSMSTVS*MRLYRE Trigger: CTCTCTATATAGTCTCATGCAAGAAACAGTTGACAT...GCTCTTAACTACTGAGCCTTCTCTGCCATCCCTGAGAAAAGCTATAACAAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR CCA 90 bp | TGTCTTCTGTGTGCTGTGATTAAAGGCATGTACCATTTTACCTGTCATTATTATGGCTTTTCGGCAGTATaGATTCTGCAATGCCTTTTA | + |
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Preference number: 4 (lower is better) Translates to: CLLCAVIKGMYHFTCHYYGFSAV*ILQCLL Trigger: TAAAAGGCATTGCAGAATCCATACTGCCGAAAAGCC...ATAATAATGACAGGTAAAATGGTACATGCCTTTAATCACAGCACACAGAAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR CCA 90 bp | TGTCTTCTGTGTGCTGTGATTAAAGGCATGTACCATTTTACCTGTCATTATTATTATAGAGAGCTGAAATaGTCATCATGTTCATCCTGC | + |
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Preference number: 4 (lower is better) Translates to: CLLCAVIKGMYHFTCHYYYRELK*SSCSSC Trigger: GCAGGATGAACATGATGACCATTTCAGCTCTCTATA...ATAATAATGACAGGTAAAATGGTACATGCCTTTAATCACAGCACACAGAAGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR TCA 90 bp | TGTCTTCTGTGTGCTGTGATTAAAGGCATGTACCATTTTACCTGTCATTATTATGATATGAGCACCTTGTaGAAGATTTGTTACATTCCT | + |
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Preference number: 4 (lower is better) Translates to: CLLCAVIKGMYHFTCHYYDMSTL*KICYIP Trigger: AGGAATGTAACAAATCTTTCACAAGGTGCTCATATC...ATAATAATGACAGGTAAAATGGTACATGCCTTTAATCACAGCACACAGAAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR TCA 90 bp | TGTGCTGTGATTAAAGGCATGTACCATTTTACCTGTCATTATTATGAATGGTTGATGGTCTCTAAGATATaGGCACCTTGTGAAAGATTT | + |
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Preference number: 4 (lower is better) Translates to: CAVIKGMYHFTCHYYEWLMVSKI*APCERF Trigger: AAATCTTTCACAAGGTGCTCATATCTTAGAGACCAT...CAACCATTCATAATAATGACAGGTAAAATGGTACATGCCTTTAATCACAGCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR GCA 90 bp | TGTCTTCTGTGTGCTGTGATTAAAGGCATGTACCATTTTACCTGTCATTATTATACTTCTATTATAAAGTaGACAGTTGGAGGGTTCATG | + |
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Preference number: 4 (lower is better) Translates to: CLLCAVIKGMYHFTCHYYTSIIK*TVGGFM Trigger: CATGAACCCTCCAACTGTGCACTTTATAATAGAAGT...ATAATAATGACAGGTAAAATGGTACATGCCTTTAATCACAGCACACAGAAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR GCA 90 bp | TGTCTTCTGTGTGCTGTGATTAAAGGCATGTACCATTTTACCTGTCATTATTATTTTGTATGGTTTCTTTaGCGTATGCAGTGTTTGATC | + |
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Preference number: 4 (lower is better) Translates to: CLLCAVIKGMYHFTCHYYFVWFL*RMQCLI Trigger: GATCAAACACTGCATACGGCAAAGAAACCATACAAA...ATAATAATGACAGGTAAAATGGTACATGCCTTTAATCACAGCACACAGAAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR CCA 90 bp | TGTGCTGTGATTAAAGGCATGTACCATTTTACCTGTCATTATTATGAATGGTTGTATAAAGTGCACAGTTaGAGGGTTCATGAAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: CAVIKGMYHFTCHYYEWLYKVHS*RVHEAF Trigger: AAATGCTTCATGAACCCTCCAACTGTGCACTTTATA...CAACCATTCATAATAATGACAGGTAAAATGGTACATGCCTTTAATCACAGCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR CAA 90 bp | GTTATAGCTTTTCTCAGGGATGGCAGAGAAGGCTCAGTAGTTAAGAGCACTGGCTGTGTCTATCTGCGTTaGATGAGTCAACAGAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: VIAFLRDGREGSVVKSTGCVYLR*MSQQRH Trigger: ATGCCTCTGTTGACTCATCAAACGCAGATAGACACA...GCCAGTGCTCTTAACTACTGAGCCTTCTCTGCCATCCCTGAGAAAAGCTATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR CAA 90 bp | GGTCTATGTAGTTCGGGAAGTCCTGGAACTGGATTCACAGTGATCTCTGTCTTCCTCACAGTCTTTAGATaGGCAAGTGTCTTCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: GLCSSGSPGTGFTVISVFLTVFR*ASVFFS Trigger: GGAGAAGAAGACACTTGCCAATCTAAAGACTGTGAG...GAAGACAGAGATCACTGTGAATCCAGTTCCAGGACTTCCCGAACTACATAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR CAA 90 bp | GGTCTATGTAGTTCGGGAAGTCCTGGAACTGGATTCACAGTGATCTCTGTCTTCCCGATGTGCATACTTTaGTGTCTATCTGCGTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: GLCSSGSPGTGFTVISVFPMCIL*CLSAFD Trigger: ATCAAACGCAGATAGACACAAAAGTATGCACATCGG...GAAGACAGAGATCACTGTGAATCCAGTTCCAGGACTTCCCGAACTACATAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS TCA 90 bp | CTGAGGCTTGAGGTGGTACTGAAGTATTTCCTGCAGTGCCCACATTaGTATGGCTTTTCTTCCATGTCAACTGTTTCTTGCATGAGACTA | + |
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Preference number: 5 (lower is better) Translates to: LRLEVVLKYFLQCPH*YGFSSMSTVSCMRL Trigger: TAGTCTCATGCAAGAAACAGTTGACATGGAAGAAAAGCCATATCAATGTGGGCACTGCAGGAAATACTTCAGTACCACCTCAAGCCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079242.4 ENSMUST00000233281.2 |
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| CDS-3UTR CAA 90 bp | GTTTTTGTTATAGCTTTTCTCAGGGATGGCAGAGAAGGCTCAGTAGTTAAGAGCCCTGCAGTGCCCACATaGATATGGCTTTTCTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: VFVIAFLRDGREGSVVKSPAVPT*IWLFFH Trigger: ATGGAAGAAAAGCCATATCAATGTGGGCACTGCAGG...GCTCTTAACTACTGAGCCTTCTCTGCCATCCCTGAGAAAAGCTATAACAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS GCA 90 bp | AAGACTCCTTTTCAGTCCTCACAGGTTGATGGACAGTATCACATATaGAGTAGTTCTCCACAGAGACCAGGTTGCTATAATTCTCTACCA | + |
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Preference number: 5 (lower is better) Translates to: KTPFQSSQVDGQYHI*SSSPQRPGCYNSLP Trigger: TGGTAGAGAATTATAGCAACCTGGTCTCTGTGGAGAACTACTGCATATGTGATACTGTCCATCAACCTGTGAGGACTGAAAAGGAGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079242.4 ENSMUST00000233281.2 |
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| CDS-3UTR CAA 90 bp | GTTATAGCTTTTCTCAGGGATGGCAGAGAAGGCTCAGTAGTTAAGAGCACTGGCATTTGTATGGTTTCTTaGCCGTATGCAGTGTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: VIAFLRDGREGSVVKSTGICMVS*PYAVFD Trigger: ATCAAACACTGCATACGGCAAAGAAACCATACAAAT...GCCAGTGCTCTTAACTACTGAGCCTTCTCTGCCATCCCTGAGAAAAGCTATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR CAA 90 bp | GTTTTTGTTATAGCTTTTCTCAGGGATGGCAGAGAAGGCTCAGTAGTTAAGAGCTCATGTTCATCCTGCTaGTGCTCTTTCTTTTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: VFVIAFLRDGREGSVVKSSCSSC*CSFFSV Trigger: CACTGAAAAGAAAGAGCACAAGCAGGATGAACATGA...GCTCTTAACTACTGAGCCTTCTCTGCCATCCCTGAGAAAAGCTATAACAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS GCA 90 bp | TCTGTAGTTGTTAGAGGCTTCTGTAGTGTCACTTCTATTATAAAGTaGACAGTTGGAGGGTTCATGAAGCATTTCGTTGAGCTCATTACA | + |
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Preference number: 5 (lower is better) Translates to: SVVVRGFCSVTSIIK*TVGGFMKHFVELIT Trigger: TGTAATGAGCTCAACGAAATGCTTCATGAACCCTCCAACTGTGCACTTTATAATAGAAGTGACACTACAGAAGCCTCTAACAACTACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079242.4 ENSMUST00000233281.2 |
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| CDS-3UTR CAA 90 bp | TGTCTTCTGTGTGCTGTGATTAAAGGCATGTACCATTTTACCTGTCATTATTATCACCTTGTGAAAGATTaGTTACATTCCTGGCATTTG | + |
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Preference number: 5 (lower is better) Translates to: CLLCAVIKGMYHFTCHYYHLVKD*LHSWHL Trigger: CAAATGCCAGGAATGTAACAAATCTTTCACAAGGTG...ATAATAATGACAGGTAAAATGGTACATGCCTTTAATCACAGCACACAGAAGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS-3UTR CAA 90 bp | TGTCTTCTGTGTGCTGTGATTAAAGGCATGTACCATTTTACCTGTCATTATTATCACTTGGTAATAGATTaGTCACATTCCCTATATCTG | + |
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Preference number: 5 (lower is better) Translates to: CLLCAVIKGMYHFTCHYYHLVID*SHSLYL Trigger: CAGATATAGGGAATGTGACAAATCTATTACCAAGTG...ATAATAATGACAGGTAAAATGGTACATGCCTTTAATCACAGCACACAGAAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233281.2 |
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| CDS CAA 90 bp | GTTGAGCTCATTACATGGACAAGACTCCTTTTCAGTCCTCACAGGTaGATGGACAGTATCACATATGCAGTAGTTCTCCACAGAGACCAG | + |
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Preference number: 6 (lower is better) Translates to: VELITWTRLLFSPHR*MDSITYAVVLHRDQ Trigger: CTGGTCTCTGTGGAGAACTACTGCATATGTGATACTGTCCATCAACCTGTGAGGACTGAAAAGGAGTCTTGTCCATGTAATGAGCTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079242.4 ENSMUST00000233281.2 |
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| CDS CCA 72 bp | GGAGGGTTCATGAAGCATTTCGTTGAGCTCATTACATaGACAAGACTCCTTTTCAGTCCTCACAGGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: GGFMKHFVELIT*TRLLFSPHRLM Trigger: CATCAACCTGTGAGGACTGAAAAGGAGTCTTGTCCATGTAATGAGCTCAACGAAATGCTTCATGAACCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079242.4 ENSMUST00000233281.2 |
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| CDS CAA 72 bp | GATTGGCAAGTGTCTTCTTCTCCGATGTGCATACTTTaGTGTCTATCTGCGTTTGATGAGTCAACAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: DWQVSSSPMCIL*CLSAFDESTEA Trigger: TGCCTCTGTTGACTCATCAAACGCAGATAGACACAAAAGTATGCACATCGGAGAAGAAGACACTTGCCAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079242.4 ENSMUST00000233281.2 |
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| CDS CAA 90 bp | CAGTCTTTAGATTGGCAAGTGTCTTCTTCTCCGATGTGCATACTTTaGTGTCTATCTGCGTTTGATGAGTCAACAGAGGCATCCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: QSLDWQVSSSPMCIL*CLSAFDESTEASFS Trigger: TGAGAAGGATGCCTCTGTTGACTCATCAAACGCAGATAGACACAAAAGTATGCACATCGGAGAAGAAGACACTTGCCAATCTAAAGACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079242.4 ENSMUST00000233281.2 |
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| CDS CAA 72 bp | ATTACATGGACAAGACTCCTTTTCAGTCCTCACAGGTaGATGGACAGTATCACATATGCAGTAGTTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: ITWTRLLFSPHR*MDSITYAVVLH Trigger: GTGGAGAACTACTGCATATGTGATACTGTCCATCAACCTGTGAGGACTGAAAAGGAGTCTTGTCCATGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079242.4 ENSMUST00000233281.2 |
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| CDS GCA 72 bp | GTTAGAGGCTTCTGTAGTGTCACTTCTATTATAAAGTaGACAGTTGGAGGGTTCATGAAGCATTTCGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: VRGFCSVTSIIK*TVGGFMKHFVE Trigger: CTCAACGAAATGCTTCATGAACCCTCCAACTGTGCACTTTATAATAGAAGTGACACTACAGAAGCCTCTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079242.4 ENSMUST00000233281.2 |
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| CDS GCA 72 bp | CAGTCTTTAGATTGGCAAGTGTCTTCTTCTCCGATGTaGATACTTTTGTGTCTATCTGCGTTTGATGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: QSLDWQVSSSPM*ILLCLSAFDES Trigger: TGACTCATCAAACGCAGATAGACACAAAAGTATGCACATCGGAGAAGAAGACACTTGCCAATCTAAAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079242.4 ENSMUST00000233281.2 |
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| CDS TCA 72 bp | TCCTGCTTGTGCTCTTTCTTTTCAGTGTTGAGTCTTTaGTATTGCCGAATGTTGGAACACAAATTGAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SCLCSFFSVLSL*YCRMLEHKLKD Trigger: ATCTTTCAATTTGTGTTCCAACATTCGGCAATATCAAAGACTCAACACTGAAAAGAAAGAGCACAAGCAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079242.4 ENSMUST00000233281.2 |
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| CDS CAA 72 bp | ATCCTGCTTGTGCTCTTTCTTTTCAGTGTTGAGTCTTaGATATTGCCGAATGTTGGAACACAAATTGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: ILLVLFLFSVES*ILPNVGTQIER Trigger: TCTTTCAATTTGTGTTCCAACATTCGGCAATATCAAAGACTCAACACTGAAAAGAAAGAGCACAAGCAGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079242.4 ENSMUST00000233281.2 |
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| CDS CAA 90 bp | ATCATGTTCATCCTGCTTGTGCTCTTTCTTTTCAGTGTTGAGTCTTaGATATTGCCGAATGTTGGAACACAAATTGAAAGATTTCTCACA | + |
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Preference number: 6 (lower is better) Translates to: IMFILLVLFLFSVES*ILPNVGTQIERFLT Trigger: TGTGAGAAATCTTTCAATTTGTGTTCCAACATTCGGCAATATCAAAGACTCAACACTGAAAAGAAAGAGCACAAGCAGGATGAACATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079242.4 ENSMUST00000233281.2 |
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| CDS CAA 72 bp | CTTGTGCTCTTTCTTTTCAGTGTTGAGTCTTTGATATaGCCGAATGTTGGAACACAAATTGAAAGATTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LVLFLFSVESLI*PNVGTQIERFL Trigger: GAGAAATCTTTCAATTTGTGTTCCAACATTCGGCAATATCAAAGACTCAACACTGAAAAGAAAGAGCACAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079242.4 ENSMUST00000233281.2 |
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