Pregenerated sensors for ZFP503 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039081Ensembl transcript IDs: ENSMUST00000043409.9
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AATTCTGTAGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGACCTCGCTCGGGTCCTaGCCCTCCCTCGCTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: NSVAALFLFILYKGSEGLTSLGS*PSLAPP Trigger: GGGAGGAGCGAGGGAGGGGCAGGACCCGAGCGAGGT...CAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCTACAGAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| 3UTR-3UTR GCA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACCGGGTCTTCTGCCCCTaGGGGTGTCAGGAACCTCGC | + |
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Preference number: 2 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHRVFCP*GCQEPR Trigger: GCGAGGTTCCTGACACCCGCAGGGGCAGAAGACCCG...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCCCCTGGGCTGCCCGGTaGGCCCGACGTGGGGATGTG | + |
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Preference number: 4 (lower is better) Translates to: LIGGVGVEEKFRIQALSIPWAAR*ARRGDV Trigger: CACATCCCCACGTCGGGCGCACCGGGCAGCCCAGGG...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCGCCAAGAGAGCCGGCTaGGGCCGCTGCCAGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LIGGVGVEEKFRIQALSIAKRAG*GRCQLS Trigger: GCTCAGCTGGCAGCGGCCGCAGCCGGCTCTCTTGGC...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCGTGCGTGGTGGGGGCTaGGCAGCGCCAGAGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LIGGVGVEEKFRIQALSIVRGGG*AAPESL Trigger: CAGGGACTCTGGCGCTGCGCAGCCCCCACCACGCAC...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR TCA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCGGTGGTAGCGGCTGCTaGGTCCCAGTGCGTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LIGGVGVEEKFRIQALSIGGSGC*VPVRGG Trigger: CCCACCACGCACTGGGACTCAGCAGCCGCTACCACC...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR TCA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCGCCCGAACCCGAGCTTaGGCTGGAAGAGCCGCCACA | + |
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Preference number: 4 (lower is better) Translates to: LIGGVGVEEKFRIQALSIARTRA*AGRAAT Trigger: TGTGGCGGCTCTTCCAGCTCAAGCTCGGGTTCGGGC...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCTGGGGAGCGGGCTCTTaGAATACGGGTGGTAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIGGVGVEEKFRIQALSIWGAGS*NTGGSG Trigger: GCCGCTACCACCCGTATTCCAAGAGCCCGCTCCCCA...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR TCA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCGTGGGGATGTGCATGTaGCAAGCCATGGCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LIGGVGVEEKFRIQALSIVGMCM*QAMAAA Trigger: AGCAGCAGCCATGGCTTGTCACATGCACATCCCCAC...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCCCAGTGCGGAGGCAGTaGTCAGTCTCTGTCCGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LIGGVGVEEKFRIQALSIPVRRQ*SVSVRR Trigger: TCTACGGACAGAGACTGACCACTGCCTCCGCACTGG...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCCGCCGCTGTGCTTACTaGTTCTTAGGGCAGAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LIGGVGVEEKFRIQALSIRRCAY*FLGQKA Trigger: CGCTTTCTGCCCTAAGAAGCAGTAAGCACAGCGGCG...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCTCACTGATACCCCAGTaGGGAGGCAGTGGTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIGGVGVEEKFRIQALSISLIPQ*GGSGQS Trigger: AGACTGACCACTGCCTCCGCACTGGGGTATCAGTGA...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCGTAGCTGAGGCAGTATaGGTCCCGGCACAAACTAGC | + |
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Preference number: 4 (lower is better) Translates to: LIGGVGVEEKFRIQALSIVAEAV*VPAQTS Trigger: GCTAGTTTGTGCCGGGACCCATACTGCCTCAGCTAC...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCTTTAGTGGGGTCGAGTaGCACACCGTGTGGCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: LIGGVGVEEKFRIQALSIFSGVE*HTVWQE Trigger: TTCTTGCCACACGGTGTGGCACTCGACCCCACTAAA...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACCGAGGCGCTGGCGGCTaGAGCCCCGGCCAAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHRGAGG*SPGQVA Trigger: AGCCACTTGGCCGGGGCTGCAGCCGCCAGCGCCTCG...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACCCAGAGTCCCTGGGCTaGCCGGTGCGCCCGACGTGG | + |
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Preference number: 4 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHPESLG*PVRPTW Trigger: CCACGTCGGGCGCACCGGGCAGCCCAGGGACTCTGG...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACCTAGGGAGGGTGGTGTaGCGCCCGCAGCGGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHLGRVV*RPQRPQ Trigger: CTGCGGCCGCTGCGGGCGCCACACCACCCTCCCTAG...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACCAGCGCCAGAGTCCCTaGGCTGCCCGGTGCGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHQRQSP*AARCAR Trigger: TCGGGCGCACCGGGCAGCCCAGGGACTCTGGCGCTG...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACCAGCTAATCCGGCCGTaGCCCAGCCCGGCGGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHQLIRP*PSPAGT Trigger: GGTACCCGCCGGGCTGGGGCACGGCCGGATTAGCTG...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACCCGAGGCGCTGGAGCTaGGACTGCCTGTCCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHPRRWS*DCLSWA Trigger: CGCCCAGGACAGGCAGTCCCAGCTCCAGCGCCTCGG...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR TCA 90 bp | AATTCTGTAGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGCCAGCTCGATGGGGCTaGCGGGCGTGGAAGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSVAALFLFILYKGSEGLPARWG*RAWKAG Trigger: CCCTGCCTTCCACGCCCGTCAGCCCCATCGAGCTGG...CAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCTACAGAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCTGCAAATACTCTGGGTaGAAAATGTGGCCAGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LIGGVGVEEKFRIQALSICKYSG*KMWPVR Trigger: ACGGACTGGCCACATTTTGCACCCAGAGTATTTGCA...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR TCA 90 bp | ATAAATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATGCGGCCGCTGCCAGCTaGGCCCCTACCAGGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: INKYQCSPAKSSDEHFFNAAAAS*APTRLP Trigger: TGGCAGCCTGGTAGGGGCTCAGCTGGCAGCGGCCGC...ATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTATTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACAGCCATGGCTGCTGCTaGGGCGCTGGCGAGAGACGA | + |
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Preference number: 4 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHSHGCC*GAGERR Trigger: TCGTCTCTCGCCAGCGCCGCAGCAGCAGCCATGGCT...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACGTGACAAGCCATGGCTaGTGCTGCGGCGCTGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHVTSHG*CCGAGE Trigger: CTCGCCAGCGCCGCAGCAGCAGCCATGGCTTGTCAC...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | ATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATTAGTGGCCGGGGAGGAGCCTaGGCCGTGGCCGGAGCAATT | + |
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Preference number: 4 (lower is better) Translates to: INTNVHRRSPQMNTFSISGRGGA*AVAGAI Trigger: AATTGCTCCGGCCACGGCCCAGGCTCCTCCCCGGCC...ACTAATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | ATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATTAGTACGAGGTGGGCGCGCTaGGGCCCGAACCCGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: INTNVHRRSPQMNTFSISTRWAR*GPNPSL Trigger: CAAGCTCGGGTTCGGGCCCCAGCGCGCCCACCTCGT...ACTAATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | AATTCTGTAGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGAAACCGACGACGAGGTaGGCGCGCTGGGGCCCGAAC | + |
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Preference number: 4 (lower is better) Translates to: NSVAALFLFILYKGSEGLKPTTR*ARWGPN Trigger: GTTCGGGCCCCAGCGCGCCCACCTCGTCGTCGGTTT...CAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCTACAGAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACCCGCCGCCGCCGCTGTaGTTACTGCTTCTTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHPPPPL*LLLLRA Trigger: TGCCCTAAGAAGCAGTAAGCACAGCGGCGGCGGCGG...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACTGCCTGGGTAGGTCATaGCCGCAGGGGGTAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHCLGRS*PQGVEG Trigger: TCCCTCTACCCCCTGCGGGCATGACCTACCCAGGCA...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | AATTCTGTAGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTCCAGAAAGCGCGCTaGTCCAGGCAGGGTCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: NSVAALFLFILYKGSEGLFQKAR*SRQGPR Trigger: GCGCGGACCCTGCCTGGACCAGCGCGCTTTCTGGAA...CAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCTACAGAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | ATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATTAGTAGTCCCAGTGCGTGGTaGGGGCTGCGCAGCGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: INTNVHRRSPQMNTFSISSPSAW*GLRSAR Trigger: TCTGGCGCTGCGCAGCCCCCACCACGCACTGGGACT...ACTAATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | ATAAATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATCTGAGTCCCAGTGCGTaGTGGGGGCTGCGCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: INKYQCSPAKSSDEHFFNLSPSA*WGLRSA Trigger: GGCGCTGCGCAGCCCCCACCACGCACTGGGACTCAG...ATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTATTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | AATTCTGTAGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGACGCCGTGCAGTGGGTaGGTGGGGTATACTAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: NSVAALFLFILYKGSEGLTPCSG*VGYTSG Trigger: CCCGCTAGTATACCCCACGCACCCACTGCACGGCGT...CAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCTACAGAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | AATTCTGTAGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTGTCCTGGGCGTAAATaGCTGGCAGGTGGCGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: NSVAALFLFILYKGSEGLCPGRK*LAGGAR Trigger: CCGAGCGCCACCTGCCAGCCATTTACGCCCAGGACA...CAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCTACAGAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACGAGTGCCACACCGTGTaGCAAGAACTGGGGCGGGTA | + |
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Preference number: 4 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHECHTV*QELGRV Trigger: TACCCGCCCCAGTTCTTGCCACACGGTGTGGCACTC...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | AATTCTGTAGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGCCTGGGAAGGCCGTATaGGTCCGCAAGTGGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: NSVAALFLFILYKGSEGLPGKAV*VRKWLS Trigger: GCTGAGCCACTTGCGGACCCATACGGCCTTCCCAGG...CAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCTACAGAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | AATTCTGTAGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGGCATGTGACAAGCCATaGCTGCTGCTGCGGCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: NSVAALFLFILYKGSEGLACDKP*LLLRRW Trigger: CCAGCGCCGCAGCAGCAGCCATGGCTTGTCACATGC...CAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCTACAGAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | AATTCTGTAGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGCCGGTGCGCCCGACGTaGGGATGTGCATGTGACAAG | + |
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Preference number: 4 (lower is better) Translates to: NSVAALFLFILYKGSEGLPVRPT*GCACDK Trigger: CTTGTCACATGCACATCCCCACGTCGGGCGCACCGG...CAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCTACAGAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | ATAAATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATCTGGGGCACCGGGCGTaGGGAGCGGGCTCTTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: INKYQCSPAKSSDEHFFNLGHRA*GAGSWN Trigger: ATTCCAAGAGCCCGCTCCCCACGCCCGGTGCCCCAG...ATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTATTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | AATTCTGTAGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGAGTAGTATGGTCCGGTaGCGGCAGGCACCGGCACTG | + |
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Preference number: 4 (lower is better) Translates to: NSVAALFLFILYKGSEGLSSMVR*RQAPAL Trigger: CAGTGCCGGTGCCTGCCGCCACCGGACCATACTACT...CAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCTACAGAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR TCA 90 bp | ATAAATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATTGGCGCAGTGGTAGCTaGGGCAGTATGGGTCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: INKYQCSPAKSSDEHFFNWRSGS*GSMGPG Trigger: GCCGGGACCCATACTGCCTCAGCTACCACTGCGCCA...ATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | ATAAATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATCAAAAGGCTTGGTGCTaGCGGCCGGGGAGGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: INKYQCSPAKSSDEHFFNQKAWC*RPGRSL Trigger: CAGGCTCCTCCCCGGCCGGCAGCACCAAGCCTTTTG...ATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | ATAAATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATCTTTCTTGTCGTCCTTaGCCTCCGGGCCACCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: INKYQCSPAKSSDEHFFNLSCRP*PPGHPR Trigger: CCGGGGGTGGCCCGGAGGGCAAGGACGACAAGAAAG...ATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | ATAAATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATCGTGCACAAAAGGCTTaGTGCTGCCGGCCGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: INKYQCSPAKSSDEHFFNRAQKA*CCRPGR Trigger: CCTCCCCGGCCGGCAGCACCAAGCCTTTTGTGCACG...ATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | ATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATTAGTCCAGTGGGCTCTTCTTaGCGTCCAGCTCGATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: INTNVHRRSPQMNTFSISPVGSS*RPARWG Trigger: GCCCCATCGAGCTGGACGCCAAGAAGAGCCCACTGG...ACTAATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACCGACCGAGGAGAGTTTaGAAGAAGGCGAAGGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHRPRRV*KKAKGP Trigger: CGGACCCTTCGCCTTCTTCCAAACTCTCCTCGGTCG...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | ATAAATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATTCAAGGGGCCCGACTTaGCGTCCTTGTCGCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: INKYQCSPAKSSDEHFFNSRGPT*RPCRPQ Trigger: CTGGGGGCGACAAGGACGCCAAGTCGGGCCCCTTGA...ATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | ATAAATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATAACAGGCCGAGGCGCTaGAGCTGGGACTGCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: INKYQCSPAKSSDEHFFNNRPRR*SWDCLS Trigger: GGACAGGCAGTCCCAGCTCCAGCGCCTCGGCCTGTT...ATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR GCA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACAATGTGGCCAGTCCGTaGCGTCAGCATCTTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHNVASP*RQHLQH Trigger: GTGCTGAAGATGCTGACGGCACGGACTGGCCACATT...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | ATAAATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATCTGGGCGTAAATGGCTaGCAGGTGGCGCTCGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: INKYQCSPAKSSDEHFFNLGVNG*QVALGT Trigger: GGTACCGAGCGCCACCTGCCAGCCATTTACGCCCAG...ATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTATTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | AATTCTGTAGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGATAAGGGGAGTAGTATaGTCCGGTGGCGGCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSVAALFLFILYKGSEGLIRGVV*SGGGRH Trigger: GTGCCTGCCGCCACCGGACCATACTACTCCCCTTAT...CAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCTACAGAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR TCA 90 bp | ATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATTAGTATCTGCGAACATGTTTaGGCCAGCAGCGCCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: INTNVHRRSPQMNTFSISICEHV*ASSASG Trigger: CCCACTGGCGCTGCTGGCTCAAACATGTTCGCAGAT...ACTAATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | ATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATTAGTTCTGGGTGCAAAATGTaGCCAGTCCGTGCCGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: INTNVHRRSPQMNTFSISSGCKM*PVRAVS Trigger: GCTGACGGCACGGACTGGCCACATTTTGCACCCAGA...ACTAATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | ATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATTAGTCAGTTTGTCTGTCCCTaGGAAGGCCGTATGGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: INTNVHRRSPQMNTFSISQFVCP*EGRMGP Trigger: CGGACCCATACGGCCTTCCCAGGGACAGACAAACTG...ACTAATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | ATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATTAGTGTATGGGTCCGCAAGTaGCTCAGCAGCTCTTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: INTNVHRRSPQMNTFSISVWVRK*LSSSSE Trigger: TTCCGAAGAGCTGCTGAGCCACTTGCGGACCCATAC...ACTAATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACGGGTTGCAAATACTCTaGGTGCAAAATGTGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHGLQIL*VQNVAS Trigger: ACTGGCCACATTTTGCACCCAGAGTATTTGCAACCC...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CCA 90 bp | ATAAATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATCGAGAGACGAAGAACTaGGGTAGCCCGACAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: INKYQCSPAKSSDEHFFNRETKN*GSPTAV Trigger: AACTGCTGTCGGGCTACCCCAGTTCTTCGTCTCTCG...ATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTATTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| 3UTR CAA 72 bp | AACATTAAAGAGAAGACCCCTAATTCTGTAGCGGCTTaGTTTTTATTTATACTCTACAAGGGATCGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NIKEKTPNSVAA*FLFILYKGSEG Trigger: ACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCTACAGAATTAGGGGTCTTCTCTTTAATGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS CCA 90 bp | GGGAGGAGCCTGGGCCGTGGCCGGAGCAATTTCCAGAAAGCGCGCTaGTCCAGGCAGGGTCCGCGCTGCCGCCGCCGCTGCCGCCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: GRSLGRGRSNFQKAR*SRQGPRCRRRCRRR Trigger: GCGGCGGCGGCAGCGGCGGCGGCAGCGCGGACCCTGCCTGGACCAGCGCGCTTTCTGGAAATTGCTCCGGCCACGGCCCAGGCTCCTCCC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS GCA 90 bp | TCTTGTCGTCCTTGCCCTCCGGGCCACCCCCGGCGGAGGGCAGCATaGCTCCCGGCGAACAGGCCGAGGCGCTGGAGCTGGGACTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCRPCPPGHPRRRAA*LPANRPRRWSWDCL Trigger: CAGGCAGTCCCAGCTCCAGCGCCTCGGCCTGTTCGCCGGGAGGCATGCTGCCCTCCGCCGGGGGTGGCCCGGAGGGCAAGGACGACAAGA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS TCA 90 bp | CCTGGGCGTAAATGGCTGGCAGGTGGCGCTCGGTACCCGGAATCCTaGCTTCTCTGCAGCAACACCCCCGCCGCCGCCCCCGCCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGRKWLAGGARYPES*LLCSNTPAAAPAAA Trigger: GGCGGCGGCGGGGGCGGCGGCGGGGGTGTTGCTGCAGAGAAGTCAGGATTCCGGGTACCGAGCGCCACCTGCCAGCCATTTACGCCCAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS GCA 90 bp | GCTTCAAGGGGCCCGACTTGGCGTCCTTGTCGCCCCCAGCTCCGTTaGCTGCACCACCCGCGCCGCCGCCGTTGGAGGCGACCGAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASRGPTWRPCRPQLR*LHHPRRRRWRRPRR Trigger: TCTCCTCGGTCGCCTCCAACGGCGGCGGCGCGGGTGGTGCAGGCAACGGAGCTGGGGGCGACAAGGACGCCAAGTCGGGCCCCTTGAAGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS GCA 90 bp | TGCTGCTGCCACCGCCGCCAGCTTCCGGATCTTTCTTGTCGTCCTTaGCCTCCGGGCCACCCCCGGCGGAGGGCAGCATGCCTCCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CCCHRRQLPDLSCRP*PPGHPRRRAACLPA Trigger: CGCCGGGAGGCATGCTGCCCTCCGCCGGGGGTGGCCCGGAGGGCAAGGACGACAAGAAAGATCCGGAAGCTGGCGGCGGTGGCAGCAGCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS GCA 90 bp | TGGTTCACGTCCACGTTAATTCCGCCGCCGCAGCTAATCCGGCCGTaGCCCAGCCCGGCGGGTACCCCGTCTGCCGAGGCGCCCCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WFTSTLIPPPQLIRP*PSPAGTPSAEAPPE Trigger: CTCCGGGGGCGCCTCGGCAGACGGGGTACCCGCCGGGCTGGGGCACGGCCGGATTAGCTGCGGCGGCGGAATTAACGTGGACGTGAACCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS TCA 90 bp | CGGGCGTGGGGAGCGGGCTCTTGGAATACGGGTGGTAGCGGCTGCTaGGTCCCAGTGCGTGGTGGGGGCTGCGCAGCGCCAGAGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RAWGAGSWNTGGSGC*VPVRGGGCAAPESL Trigger: CAGGGACTCTGGCGCTGCGCAGCCCCCACCACGCACTGGGACTCAGCAGCCGCTACCACCCGTATTCCAAGAGCCCGCTCCCCACGCCCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS GCA 90 bp | CAAGGGGCCCGACTTGGCGTCCTTGTCGCCCCCAGCTCCGTTGCCTaGACCACCCGCGCCGCCGCCGTTGGAGGCGACCGAGGAGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QGARLGVLVAPSSVA*TTRAAAVGGDRGEF Trigger: AAACTCTCCTCGGTCGCCTCCAACGGCGGCGGCGCGGGTGGTGCAGGCAACGGAGCTGGGGGCGACAAGGACGCCAAGTCGGGCCCCTTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS GCA 90 bp | GCCCGGCGGGTACCCCGTCTGCCGAGGCGCCCCCGGAGCCTTTGCTaGTGCCACCGCCGCCAGCTTCCGGATCTTTCTTGTCGTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARRVPRLPRRPRSLC*CHRRQLPDLSCRPC Trigger: GCAAGGACGACAAGAAAGATCCGGAAGCTGGCGGCGGTGGCAGCAGCAAAGGCTCCGGGGGCGCCTCGGCAGACGGGGTACCCGCCGGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS GCA 90 bp | CCAGCCCGGCGGGTACCCCGTCTGCCGAGGCGCCCCCGGAGCCTTTaGTGCTGCCACCGCCGCCAGCTTCCGGATCTTTCTTGTCGTCCT | + |
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Preference number: 5 (lower is better) Translates to: PARRVPRLPRRPRSL*CCHRRQLPDLSCRP Trigger: AGGACGACAAGAAAGATCCGGAAGCTGGCGGCGGTGGCAGCAGCAAAGGCTCCGGGGGCGCCTCGGCAGACGGGGTACCCGCCGGGCTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS GCA 90 bp | TGCGTGGTGGGGGCTGCGCAGCGCCAGAGTCCCTGGGCTGCCCGGTaGGCCCGACGTGGGGATGTGCATGTGACAAGCCATGGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: CVVGAAQRQSPWAAR*ARRGDVHVTSHGCC Trigger: GCAGCAGCCATGGCTTGTCACATGCACATCCCCACGTCGGGCGCACCGGGCAGCCCAGGGACTCTGGCGCTGCGCAGCCCCCACCACGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS GCA 90 bp | GTCCCAGTGCGTGGTGGGGGCTGCGCAGCGCCAGAGTCCCTGGGCTaGCCGGTGCGCCCGACGTGGGGATGTGCATGTGACAAGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: VPVRGGGCAAPESLG*PVRPTWGCACDKPW Trigger: CCATGGCTTGTCACATGCACATCCCCACGTCGGGCGCACCGGGCAGCCCAGGGACTCTGGCGCTGCGCAGCCCCCACCACGCACTGGGAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS CCA 90 bp | GGGCCACCAGACCGGAGCCCAAAACCGACGACGAGGTGGGCGCGCTaGGGCCCGAACCCGAGCTTGAGCTGGAAGAGCCGCCACAGTCCG | + |
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Preference number: 5 (lower is better) Translates to: GPPDRSPKPTTRWAR*GPNPSLSWKSRHSP Trigger: CGGACTGTGGCGGCTCTTCCAGCTCAAGCTCGGGTTCGGGCCCCAGCGCGCCCACCTCGTCGTCGGTTTTGGGCTCCGGTCTGGTGGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS CCA 90 bp | GCTGAGTCCCAGTGCGTGGTGGGGGCTGCGCAGCGCCAGAGTCCCTaGGCTGCCCGGTGCGCCCGACGTGGGGATGTGCATGTGACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AESQCVVGAAQRQSP*AARCARRGDVHVTS Trigger: GCTTGTCACATGCACATCCCCACGTCGGGCGCACCGGGCAGCCCAGGGACTCTGGCGCTGCGCAGCCCCCACCACGCACTGGGACTCAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS TCA 90 bp | GAGGGTGGTGTGGCGCCCGCAGCGGCCGCAGCCGTCAGCGAGGAGTaGACGCCGTGCAGTGGGTGCGTGGGGTATACTAGCGGGTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: EGGVAPAAAAAVSEE*TPCSGCVGYTSGYP Trigger: GGGATACCCGCTAGTATACCCCACGCACCCACTGCACGGCGTTCACTCCTCGCTGACGGCTGCGGCCGCTGCGGGCGCCACACCACCCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS GCA 90 bp | CGGCGGGTACCCCGTCTGCCGAGGCGCCCCCGGAGCCTTTGCTGCTaGCACCGCCGCCAGCTTCCGGATCTTTCTTGTCGTCCTTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRVPRLPRRPRSLCC*HRRQLPDLSCRPCP Trigger: AGGGCAAGGACGACAAGAAAGATCCGGAAGCTGGCGGCGGTGGCAGCAGCAAAGGCTCCGGGGGCGCCTCGGCAGACGGGGTACCCGCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS CCA 90 bp | CCGACGACGAGGTGGGCGCGCTGGGGCCCGAACCCGAGCTTGAGCTaGAAGAGCCGCCACAGTCCGAGCCTAGAGCCTTGCCTCCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PTTRWARWGPNPSLS*KSRHSPSLEPCLLD Trigger: GTCCAGGAGGCAAGGCTCTAGGCTCGGACTGTGGCGGCTCTTCCAGCTCAAGCTCGGGTTCGGGCCCCAGCGCGCCCACCTCGTCGTCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS GCA 90 bp | CGAACCCGCTGGCTTACTGCAGCCAAGAGAGCCGGCTGCGGCCGCTaGCAGCTGAGCCCCTACCAGGCTGCCAGGTTTAGTGGGGTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: RTRWLTAAKRAGCGR*QLSPYQAARFSGVE Trigger: CTCGACCCCACTAAACCTGGCAGCCTGGTAGGGGCTCAGCTGGCAGCGGCCGCAGCCGGCTCTCTTGGCTGCAGTAAGCCAGCGGGTTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS GCA 90 bp | GCCCGGTGCGCCCGACGTGGGGATGTGCATGTGACAAGCCATGGCTaGTGCTGCGGCGCTGGCGAGAGACGAAGAACTGGGGTAGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: ARCARRGDVHVTSHG*CCGAGERRRTGVAR Trigger: TCGGGCTACCCCAGTTCTTCGTCTCTCGCCAGCGCCGCAGCAGCAGCCATGGCTTGTCACATGCACATCCCCACGTCGGGCGCACCGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS CCA 90 bp | CACAGCGTGCACAAAAGGCTTGGTGCTGCCGGCCGGGGAGGAGCCTaGGCCGTGGCCGGAGCAATTTCCAGAAAGCGCGCTGGTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HSVHKRLGAAGRGGA*AVAGAISRKRAGPG Trigger: GCCTGGACCAGCGCGCTTTCTGGAAATTGCTCCGGCCACGGCCCAGGCTCCTCCCCGGCCGGCAGCACCAAGCCTTTTGTGCACGCTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS CCA 90 bp | GGCTGCCCGGTGCGCCCGACGTGGGGATGTGCATGTGACAAGCCATaGCTGCTGCTGCGGCGCTGGCGAGAGACGAAGAACTGGGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GCPVRPTWGCACDKP*LLLRRWRETKNWGS Trigger: GCTACCCCAGTTCTTCGTCTCTCGCCAGCGCCGCAGCAGCAGCCATGGCTTGTCACATGCACATCCCCACGTCGGGCGCACCGGGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS CCA 90 bp | GGCATAAGGGGAGTAGTATGGTCCGGTGGCGGCAGGCACCGGCACTaGGGCACCGGGCGTGGGGAGCGGGCTCTTGGAATACGGGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GIRGVVWSGGGRHRH*GTGRGERALGIRVV Trigger: TACCACCCGTATTCCAAGAGCCCGCTCCCCACGCCCGGTGCCCCAGTGCCGGTGCCTGCCGCCACCGGACCATACTACTCCCCTTATGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS TCA 90 bp | CGCCGTGCAGTGGGTGCGTGGGGTATACTAGCGGGTATCCCGATTTaGGCGCTGCTGCTGCAGCGGCCGGATCATGAGCGCACGAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RRAVGAWGILAGIPI*ALLLQRPDHERTRR Trigger: GCGCCTCGTGCGCTCATGATCCGGCCGCTGCAGCAGCAGCGCTCAAATCGGGATACCCGCTAGTATACCCCACGCACCCACTGCACGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS TCA 90 bp | AGAGTCCCTGGGCTGCCCGGTGCGCCCGACGTGGGGATGTGCATGTaGCAAGCCATGGCTGCTGCTGCGGCGCTGGCGAGAGACGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RVPGLPGAPDVGMCM*QAMAAAAALARDEE Trigger: TTCTTCGTCTCTCGCCAGCGCCGCAGCAGCAGCCATGGCTTGTCACATGCACATCCCCACGTCGGGCGCACCGGGCAGCCCAGGGACTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS GCA 90 bp | CAGAGGACTCGAACCCGCTGGCTTACTGCAGCCAAGAGAGCCGGCTaGGGCCGCTGCCAGCTGAGCCCCTACCAGGCTGCCAGGTTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: QRTRTRWLTAAKRAG*GRCQLSPYQAARFS Trigger: ACTAAACCTGGCAGCCTGGTAGGGGCTCAGCTGGCAGCGGCCGCAGCCGGCTCTCTTGGCTGCAGTAAGCCAGCGGGTTCGAGTCCTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS GCA 90 bp | TGCGCCCGACGTGGGGATGTGCATGTGACAAGCCATGGCTGCTGCTaGGGCGCTGGCGAGAGACGAAGAACTGGGGTAGCCCGACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CARRGDVHVTSHGCC*GAGERRRTGVARQQ Trigger: CTGCTGTCGGGCTACCCCAGTTCTTCGTCTCTCGCCAGCGCCGCAGCAGCAGCCATGGCTTGTCACATGCACATCCCCACGTCGGGCGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS CCA 90 bp | CAGTCCGAGCCTAGAGCCTTGCCTCCTGGACCCCCTTCCGAGTGCTaGTTCACGTCCACGTTAATTCCGCCGCCGCAGCTAATCCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QSEPRALPPGPPSEC*FTSTLIPPPQLIRP Trigger: CGGCCGGATTAGCTGCGGCGGCGGAATTAACGTGGACGTGAACCAGCACTCGGAAGGGGGTCCAGGAGGCAAGGCTCTAGGCTCGGACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS GCA 90 bp | CCACAGTCCGAGCCTAGAGCCTTGCCTCCTGGACCCCCTTCCGAGTaGTGGTTCACGTCCACGTTAATTCCGCCGCCGCAGCTAATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PQSEPRALPPGPPSE*WFTSTLIPPPQLIR Trigger: CCGGATTAGCTGCGGCGGCGGAATTAACGTGGACGTGAACCAGCACTCGGAAGGGGGTCCAGGAGGCAAGGCTCTAGGCTCGGACTGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS TCA 90 bp | GTAGCTGAGGCAGTATGGGTCCCGGCACAAACTAGCTGTCATCACTaGTGGAGGCGACGCCCCGGCCAGAGGACTCGAACCCGCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VAEAVWVPAQTSCHH*WRRRPGQRTRTRWL Trigger: AAGCCAGCGGGTTCGAGTCCTCTGGCCGGGGCGTCGCCTCCATCAGTGATGACAGCTAGTTTGTGCCGGGACCCATACTGCCTCAGCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS CCA 90 bp | GACAAGCCATGGCTGCTGCTGCGGCGCTGGCGAGAGACGAAGAACTaGGGTAGCCCGACAGCAGTTTGTCTGTCCCTGGGAAGGCCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: DKPWLLLRRWRETKN*GSPTAVCLSLGRPY Trigger: ATACGGCCTTCCCAGGGACAGACAAACTGCTGTCGGGCTACCCCAGTTCTTCGTCTCTCGCCAGCGCCGCAGCAGCAGCCATGGCTTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS CCA 90 bp | ACGTGGGGATGTGCATGTGACAAGCCATGGCTGCTGCTGCGGCGCTaGCGAGAGACGAAGAACTGGGGTAGCCCGACAGCAGTTTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TWGCACDKPWLLLRR*RETKNWGSPTAVCL Trigger: CAGACAAACTGCTGTCGGGCTACCCCAGTTCTTCGTCTCTCGCCAGCGCCGCAGCAGCAGCCATGGCTTGTCACATGCACATCCCCACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS CCA 90 bp | GAGAGACGAAGAACTGGGGTAGCCCGACAGCAGTTTGTCTGTCCCTaGGAAGGCCGTATGGGTCCGCAAGTGGCTCAGCAGCTCTTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ERRRTGVARQQFVCP*EGRMGPQVAQQLFG Trigger: TCCGAAGAGCTGCTGAGCCACTTGCGGACCCATACGGCCTTCCCAGGGACAGACAAACTGCTGTCGGGCTACCCCAGTTCTTCGTCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS-3UTR CAA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCTCTTTCTTGTCGTCCTaGCCCTCCGGGCCACCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LIGGVGVEEKFRIQALSISFLSS*PSGPPP Trigger: CGGGGGTGGCCCGGAGGGCAAGGACGACAAGAAAGA...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS-3UTR CAA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCGCGACCGAGGAGAGTTaGGAAGAAGGCGAAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LIGGVGVEEKFRIQALSIATEES*EEGEGS Trigger: GGACCCTTCGCCTTCTTCCAAACTCTCCTCGGTCGC...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS-3UTR CAA 90 bp | TTGATTGGGGGAGTAGGGGTGGAGGAGAAGTTTCGCATCCAGGCTCTCTCGATCTTAGCAGACACCCAGTaGCAGATGTGGGGGAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LIGGVGVEEKFRIQALSILADTQ*QMWGSG Trigger: CCCGCTCCCCCACATCTGCAACTGGGTGTCTGCTAA...GATCGAGAGAGCCTGGATGCGAAACTTCTCCTCCACCCCTACTCCCCCAATCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS-3UTR CAA 90 bp | AATTCTGTAGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTCGCCCCCAGCTCCGTaGCCTGCACCACCCGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NSVAALFLFILYKGSEGLSPPAP*PAPPAP Trigger: CGGCGCGGGTGGTGCAGGCAACGGAGCTGGGGGCGA...CAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCTACAGAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS-3UTR CAA 90 bp | AATTCTGTAGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTCAAGGGGCCCGACTaGGCGTCCTTGTCGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NSVAALFLFILYKGSEGLFKGPD*ASLSPP Trigger: TGGGGGCGACAAGGACGCCAAGTCGGGCCCCTTGAA...CAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCTACAGAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS-3UTR CAA 90 bp | ATAAATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATGCGTGCACAAAAGGCTaGGTGCTGCCGGCCGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: INKYQCSPAKSSDEHFFNACTKG*VLPAGE Trigger: CTCCCCGGCCGGCAGCACCAAGCCTTTTGTGCACGC...ATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTATTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS-3UTR CAA 90 bp | AGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGTTTTCCACGCTTCCGGATCTTTCTaGTCGTCCTTGCCCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SGFVFIYTLQGIGGFVFHASGSF*SSLPSG Trigger: CCCGGAGGGCAAGGACGACAAGAAAGATCCGGAAGC...GTGGAAAACAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS-3UTR CAA 90 bp | ATAAATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATGCCAGTGGGCTCTTCTaGGCGTCCAGCTCGATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: INKYQCSPAKSSDEHFFNASGLF*ASSSMG Trigger: CCCCATCGAGCTGGACGCCAAGAAGAGCCCACTGGC...ATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS-3UTR CAA 90 bp | AATTCTGTAGCGGCTTTGTTTTTATTTATACTCTACAAGGGATCGGAGGGTTTGGGCTTGAAACTCGACTaGTCCTCCACGCCGATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: NSVAALFLFILYKGSEGLGLKLD*SSTPMS Trigger: CGACATCGGCGTGGAGGACAAGTCGAGTTTCAAGCC...CAAACCCTCCGATCCCTTGTAGAGTATAAATAAAAACAAAGCCGCTACAGAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS-3UTR CAA 90 bp | ATAAATAAATACCAATGTTCACCGGCGAAGTCCTCAGATGAACACTTTTTCAATAGCATCTTCAGCACCTaGATGGGCAGGCGGTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: INKYQCSPAKSSDEHFFNSIFST*MGRRLA Trigger: GGCTAACCGCCTGCCCATCAAGGTGCTGAAGATGCT...ATTGAAAAAGTGTTCATCTGAGGACTTCGCCGGTGAACATTGGTATTTATTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS GCA 72 bp | CCTTGCCCTCCGGGCCACCCCCGGCGGAGGGCAGCATaGCTCCCGGCGAACAGGCCGAGGCGCTGGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PCPPGHPRRRAA*LPANRPRRWSW Trigger: CCAGCTCCAGCGCCTCGGCCTGTTCGCCGGGAGGCATGCTGCCCTCCGCCGGGGGTGGCCCGGAGGGCAAGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS GCA 72 bp | CCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTGTaGTTACTGCTTCTTAGGGCAGAAAGCGAGGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PPPPPPPPPPPL*LLLLRAESEGA Trigger: AGCGCCCTCGCTTTCTGCCCTAAGAAGCAGTAAGCACAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS GCA 72 bp | GGCCCGACTTGGCGTCCTTGTCGCCCCCAGCTCCGTTaGCTGCACCACCCGCGCCGCCGCCGTTGGAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: GPTWRPCRPQLR*LHHPRRRRWRR Trigger: TCGCCTCCAACGGCGGCGGCGCGGGTGGTGCAGGCAACGGAGCTGGGGGCGACAAGGACGCCAAGTCGGGCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CCA 72 bp | CGGTGGCGGCAGGCACCGGCACTGGGGCACCGGGCGTaGGGAGCGGGCTCTTGGAATACGGGTGGTAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RWRQAPALGHRA*GAGSWNTGGSG Trigger: GCCGCTACCACCCGTATTCCAAGAGCCCGCTCCCCACGCCCGGTGCCCCAGTGCCGGTGCCTGCCGCCACCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CCA 72 bp | CAGTGCGTGGTGGGGGCTGCGCAGCGCCAGAGTCCCTaGGCTGCCCGGTGCGCCCGACGTGGGGATGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: QCVVGAAQRQSP*AARCARRGDVH Trigger: ATGCACATCCCCACGTCGGGCGCACCGGGCAGCCCAGGGACTCTGGCGCTGCGCAGCCCCCACCACGCACTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS GCA 72 bp | CGCCGCCGCCGCCGCCGCCGCCGCCGCTGTGCTTACTaGTTCTTAGGGCAGAAAGCGAGGGCGCTGTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRRRRRRRRCAY*FLGQKARALCS Trigger: TGAGCACAGCGCCCTCGCTTTCTGCCCTAAGAAGCAGTAAGCACAGCGGCGGCGGCGGCGGCGGCGGCGGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS GCA 72 bp | TCCACGTTAATTCCGCCGCCGCAGCTAATCCGGCCGTaGCCCAGCCCGGCGGGTACCCCGTCTGCCGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: STLIPPPQLIRP*PSPAGTPSAEA Trigger: CGCCTCGGCAGACGGGGTACCCGCCGGGCTGGGGCACGGCCGGATTAGCTGCGGCGGCGGAATTAACGTGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CCA 72 bp | GGGCCACCAGACCGGAGCCCAAAACCGACGACGAGGTaGGCGCGCTGGGGCCCGAACCCGAGCTTGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GPPDRSPKPTTR*ARWGPNPSLSW Trigger: CCAGCTCAAGCTCGGGTTCGGGCCCCAGCGCGCCCACCTCGTCGTCGGTTTTGGGCTCCGGTCTGGTGGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CCA 72 bp | TGGAGGCGACGCCCCGGCCAGAGGACTCGAACCCGCTaGCTTACTGCAGCCAAGAGAGCCGGCTGCGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: WRRRPGQRTRTR*LTAAKRAGCGR Trigger: GCGGCCGCAGCCGGCTCTCTTGGCTGCAGTAAGCCAGCGGGTTCGAGTCCTCTGGCCGGGGCGTCGCCTCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CAA 90 bp | TTGCTGCTGCCACCGCCGCCAGCTTCCGGATCTTTCTTGTCGTCCTaGCCCTCCGGGCCACCCCCGGCGGAGGGCAGCATGCCTCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLLPPPPASGSFLSS*PSGPPPAEGSMPPG Trigger: GCCGGGAGGCATGCTGCCCTCCGCCGGGGGTGGCCCGGAGGGCAAGGACGACAAGAAAGATCCGGAAGCTGGCGGCGGTGGCAGCAGCAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS TCA 72 bp | GGGCTGCCCGGTGCGCCCGACGTGGGGATGTGCATGTaGCAAGCCATGGCTGCTGCTGCGGCGCTGGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GLPGAPDVGMCM*QAMAAAAALAR Trigger: TCTCGCCAGCGCCGCAGCAGCAGCCATGGCTTGTCACATGCACATCCCCACGTCGGGCGCACCGGGCAGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS GCA 72 bp | CACCGCCGCCAGCTTCCGGATCTTTCTTGTCGTCCTTaGCCTCCGGGCCACCCCCGGCGGAGGGCAGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: HRRQLPDLSCRP*PPGHPRRRAAC Trigger: GCATGCTGCCCTCCGCCGGGGGTGGCCCGGAGGGCAAGGACGACAAGAAAGATCCGGAAGCTGGCGGCGGTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS GCA 72 bp | CGGGTACCCCGTCTGCCGAGGCGCCCCCGGAGCCTTTaGTGCTGCCACCGCCGCCAGCTTCCGGATCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RVPRLPRRPRSL*CCHRRQLPDLS Trigger: AGAAAGATCCGGAAGCTGGCGGCGGTGGCAGCAGCAAAGGCTCCGGGGGCGCCTCGGCAGACGGGGTACCCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CCA 72 bp | GACCGGAGCCCAAAACCGACGACGAGGTGGGCGCGCTaGGGCCCGAACCCGAGCTTGAGCTGGAAGAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: DRSPKPTTRWAR*GPNPSLSWKSR Trigger: GCGGCTCTTCCAGCTCAAGCTCGGGTTCGGGCCCCAGCGCGCCCACCTCGTCGTCGGTTTTGGGCTCCGGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CAA 72 bp | CCACCGCCGCCAGCTTCCGGATCTTTCTTGTCGTCCTaGCCCTCCGGGCCACCCCCGGCGGAGGGCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: PPPPASGSFLSS*PSGPPPAEGSM Trigger: CATGCTGCCCTCCGCCGGGGGTGGCCCGGAGGGCAAGGACGACAAGAAAGATCCGGAAGCTGGCGGCGGTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CAA 90 bp | CCGGAGCCTTTGCTGCTGCCACCGCCGCCAGCTTCCGGATCTTTCTaGTCGTCCTTGCCCTCCGGGCCACCCCCGGCGGAGGGCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: PEPLLLPPPPASGSF*SSLPSGPPPAEGSM Trigger: CATGCTGCCCTCCGCCGGGGGTGGCCCGGAGGGCAAGGACGACAAGAAAGATCCGGAAGCTGGCGGCGGTGGCAGCAGCAAAGGCTCCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS TCA 72 bp | GGAGCGGGCTCTTGGAATACGGGTGGTAGCGGCTGCTaGGTCCCAGTGCGTGGTGGGGGCTGCGCAGCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GAGSWNTGGSGC*VPVRGGGCAAP Trigger: TGGCGCTGCGCAGCCCCCACCACGCACTGGGACTCAGCAGCCGCTACCACCCGTATTCCAAGAGCCCGCTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS GCA 72 bp | CCCCGTCTGCCGAGGCGCCCCCGGAGCCTTTGCTGCTaGCACCGCCGCCAGCTTCCGGATCTTTCTTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: PRLPRRPRSLCC*HRRQLPDLSCR Trigger: ACGACAAGAAAGATCCGGAAGCTGGCGGCGGTGGCAGCAGCAAAGGCTCCGGGGGCGCCTCGGCAGACGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CCA 72 bp | AGGTGGGCGCGCTGGGGCCCGAACCCGAGCTTGAGCTaGAAGAGCCGCCACAGTCCGAGCCTAGAGCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RWARWGPNPSLS*KSRHSPSLEPC Trigger: GCAAGGCTCTAGGCTCGGACTGTGGCGGCTCTTCCAGCTCAAGCTCGGGTTCGGGCCCCAGCGCGCCCACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CCA 72 bp | GCGCCAGAGTCCCTGGGCTGCCCGGTGCGCCCGACGTaGGGATGTGCATGTGACAAGCCATGGCTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: APESLGCPVRPT*GCACDKPWLLL Trigger: CAGCAGCAGCCATGGCTTGTCACATGCACATCCCCACGTCGGGCGCACCGGGCAGCCCAGGGACTCTGGCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CAA 72 bp | TTGCTGCTGCCACCGCCGCCAGCTTCCGGATCTTTCTaGTCGTCCTTGCCCTCCGGGCCACCCCCGGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLLPPPPASGSF*SSLPSGPPPAE Trigger: CTCCGCCGGGGGTGGCCCGGAGGGCAAGGACGACAAGAAAGATCCGGAAGCTGGCGGCGGTGGCAGCAGCAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CAA 72 bp | ACGACGAGGTGGGCGCGCTGGGGCCCGAACCCGAGCTaGAGCTGGAAGAGCCGCCACAGTCCGAGCCTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TTRWARWGPNPS*SWKSRHSPSLE Trigger: CTCTAGGCTCGGACTGTGGCGGCTCTTCCAGCTCAAGCTCGGGTTCGGGCCCCAGCGCGCCCACCTCGTCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CAA 90 bp | CCAAAACCGACGACGAGGTGGGCGCGCTGGGGCCCGAACCCGAGCTaGAGCTGGAAGAGCCGCCACAGTCCGAGCCTAGAGCCTTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PKPTTRWARWGPNPS*SWKSRHSPSLEPCL Trigger: GAGGCAAGGCTCTAGGCTCGGACTGTGGCGGCTCTTCCAGCTCAAGCTCGGGTTCGGGCCCCAGCGCGCCCACCTCGTCGTCGGTTTTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS TCA 72 bp | AAATGGCTGGCAGGTGGCGCTCGGTACCCGGAATCCTaGCTTCTCTGCAGCAACACCCCCGCCGCCGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: KWLAGGARYPES*LLCSNTPAAAP Trigger: GGGGGCGGCGGCGGGGGTGTTGCTGCAGAGAAGTCAGGATTCCGGGTACCGAGCGCCACCTGCCAGCCATTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS GCA 72 bp | GTACCCCGTCTGCCGAGGCGCCCCCGGAGCCTTTGCTaGTGCCACCGCCGCCAGCTTCCGGATCTTTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: VPRLPRRPRSLC*CHRRQLPDLSC Trigger: ACAAGAAAGATCCGGAAGCTGGCGGCGGTGGCAGCAGCAAAGGCTCCGGGGGCGCCTCGGCAGACGGGGTAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CCA 72 bp | CCACGCCGATGTCGCTCAGCTTCAAGGGGCCCGACTTaGCGTCCTTGTCGCCCCCAGCTCCGTTGCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PRRCRSASRGPT*RPCRPQLRCLH Trigger: GTGCAGGCAACGGAGCTGGGGGCGACAAGGACGCCAAGTCGGGCCCCTTGAAGCTGAGCGACATCGGCGTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CCA 72 bp | GCTGCCAGGTTTAGTGGGGTCGAGTGCCACACCGTGTaGCAAGAACTGGGGCGGGTAGCCAGCGTAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: AARFSGVECHTV*QELGRVASVGP Trigger: GGGGCCTACGCTGGCTACCCGCCCCAGTTCTTGCCACACGGTGTGGCACTCGACCCCACTAAACCTGGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CAA 72 bp | TCCACGCCGATGTCGCTCAGCTTCAAGGGGCCCGACTaGGCGTCCTTGTCGCCCCCAGCTCCGTTGCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: STPMSLSFKGPD*ASLSPPAPLPA Trigger: TGCAGGCAACGGAGCTGGGGGCGACAAGGACGCCAAGTCGGGCCCCTTGAAGCTGAGCGACATCGGCGTGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS GCA 72 bp | TGGCTTACTGCAGCCAAGAGAGCCGGCTGCGGCCGCTaGCAGCTGAGCCCCTACCAGGCTGCCAGGTTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: WLTAAKRAGCGR*QLSPYQAARFS Trigger: ACTAAACCTGGCAGCCTGGTAGGGGCTCAGCTGGCAGCGGCCGCAGCCGGCTCTCTTGGCTGCAGTAAGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS GCA 72 bp | GCCCGACGTGGGGATGTGCATGTGACAAGCCATGGCTaGTGCTGCGGCGCTGGCGAGAGACGAAGAACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ARRGDVHVTSHG*CCGAGERRRTG Trigger: CCCAGTTCTTCGTCTCTCGCCAGCGCCGCAGCAGCAGCCATGGCTTGTCACATGCACATCCCCACGTCGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CCA 72 bp | GTGCGCCCGACGTGGGGATGTGCATGTGACAAGCCATaGCTGCTGCTGCGGCGCTGGCGAGAGACGAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VRPTWGCACDKP*LLLRRWRETKN Trigger: GTTCTTCGTCTCTCGCCAGCGCCGCAGCAGCAGCCATGGCTTGTCACATGCACATCCCCACGTCGGGCGCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CAA 72 bp | GAGCTGGAAGAGCCGCCACAGTCCGAGCCTAGAGCCTaGCCTCCTGGACCCCCTTCCGAGTGCTGGTTCACG | + |
|
Preference number: 6 (lower is better) Translates to: ELEEPPQSEPRA*PPGPPSECWFT Trigger: CGTGAACCAGCACTCGGAAGGGGGTCCAGGAGGCAAGGCTCTAGGCTCGGACTGTGGCGGCTCTTCCAGCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS TCA 72 bp | GTGGGTGCGTGGGGTATACTAGCGGGTATCCCGATTTaGGCGCTGCTGCTGCAGCGGCCGGATCATGAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: VGAWGILAGIPI*ALLLQRPDHER Trigger: GCGCTCATGATCCGGCCGCTGCAGCAGCAGCGCTCAAATCGGGATACCCGCTAGTATACCCCACGCACCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS GCA 72 bp | GAGCCTAGAGCCTTGCCTCCTGGACCCCCTTCCGAGTaGTGGTTCACGTCCACGTTAATTCCGCCGCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EPRALPPGPPSE*WFTSTLIPPPQ Trigger: CTGCGGCGGCGGAATTAACGTGGACGTGAACCAGCACTCGGAAGGGGGTCCAGGAGGCAAGGCTCTAGGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CCA 72 bp | CTGGAGCTGGGACTGCCTGTCCTGGGCGTAAATGGCTaGCAGGTGGCGCTCGGTACCCGGAATCCTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: LELGLPVLGVNG*QVALGTRNPDF Trigger: GAAGTCAGGATTCCGGGTACCGAGCGCCACCTGCCAGCCATTTACGCCCAGGACAGGCAGTCCCAGCTCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CAA 90 bp | CCCGAGCTTGAGCTGGAAGAGCCGCCACAGTCCGAGCCTAGAGCCTaGCCTCCTGGACCCCCTTCCGAGTGCTGGTTCACGTCCACGTTA | + |
|
Preference number: 6 (lower is better) Translates to: PELELEEPPQSEPRA*PPGPPSECWFTSTL Trigger: TAACGTGGACGTGAACCAGCACTCGGAAGGGGGTCCAGGAGGCAAGGCTCTAGGCTCGGACTGTGGCGGCTCTTCCAGCTCAAGCTCGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS TCA 72 bp | CCAGTGGGCTCTTCTTGGCGTCCAGCTCGATGGGGCTaGCGGGCGTGGAAGGCAGGGGTTGCAAATACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PVGSSWRPARWG*RAWKAGVANTL Trigger: CAGAGTATTTGCAACCCCTGCCTTCCACGCCCGTCAGCCCCATCGAGCTGGACGCCAAGAAGAGCCCACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS TCA 72 bp | GCAGTATGGGTCCCGGCACAAACTAGCTGTCATCACTaGTGGAGGCGACGCCCCGGCCAGAGGACTCGAACC | + |
|
Preference number: 6 (lower is better) Translates to: AVWVPAQTSCHH*WRRRPGQRTRT Trigger: GGTTCGAGTCCTCTGGCCGGGGCGTCGCCTCCATCAGTGATGACAGCTAGTTTGTGCCGGGACCCATACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CCA 72 bp | CCTAGAGCCTTGCCTCCTGGACCCCCTTCCGAGTGCTaGTTCACGTCCACGTTAATTCCGCCGCCGCAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PRALPPGPPSEC*FTSTLIPPPQL Trigger: TAGCTGCGGCGGCGGAATTAACGTGGACGTGAACCAGCACTCGGAAGGGGGTCCAGGAGGCAAGGCTCTAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CCA 72 bp | TGTGCATGTGACAAGCCATGGCTGCTGCTGCGGCGCTaGCGAGAGACGAAGAACTGGGGTAGCCCGACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CACDKPWLLLRR*RETKNWGSPTA Trigger: TGCTGTCGGGCTACCCCAGTTCTTCGTCTCTCGCCAGCGCCGCAGCAGCAGCCATGGCTTGTCACATGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CCA 72 bp | CCCGACAGCAGTTTGTCTGTCCCTGGGAAGGCCGTATaGGTCCGCAAGTGGCTCAGCAGCTCTTCGGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PDSSLSVPGKAV*VRKWLSSSSEV Trigger: CACTTCCGAAGAGCTGCTGAGCCACTTGCGGACCCATACGGCCTTCCCAGGGACAGACAAACTGCTGTCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
||
| CDS CCA 72 bp | AGAACTGGGGTAGCCCGACAGCAGTTTGTCTGTCCCTaGGAAGGCCGTATGGGTCCGCAAGTGGCTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RTGVARQQFVCP*EGRMGPQVAQQ Trigger: CTGCTGAGCCACTTGCGGACCCATACGGCCTTCCCAGGGACAGACAAACTGCTGTCGGGCTACCCCAGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS CCA 72 bp | GCTGACGGGCGTGGAAGGCAGGGGTTGCAAATACTCTaGGTGCAAAATGTGGCCAGTCCGTGCCGTCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: ADGRGRQGLQIL*VQNVASPCRQH Trigger: ATGCTGACGGCACGGACTGGCCACATTTTGCACCCAGAGTATTTGCAACCCCTGCCTTCCACGCCCGTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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| CDS TCA 72 bp | GCTCCTTCTTATCTGAACCGGGTTTGGAGTAAGGCTTaGAACTCGACTTGTCCTCCACGCCGATGTCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: APSYLNRVWSKA*NSTCPPRRCRS Trigger: TGAGCGACATCGGCGTGGAGGACAAGTCGAGTTTCAAGCCTTACTCCAAACCCGGTTCAGATAAGAAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043409.9 |
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