Pregenerated sensors for ZFP493 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090659Ensembl transcript IDs: ENSMUST00000164936.10, ENSMUST00000181319.2
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGTGTCACGTGGTAGGCAGTGTCACGTGGTAGGCAGTGTCACATaGAAGGAAACCAACTTAGTCACAAGAGCTGCACCGCAGGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: AVSRGRQCHVVGSVT*KETNLVTRAAPQVA Trigger: GGCCACCTGCGGTGCAGCTCTTGTGACTAAGTTGGTTTCCTTTCATGTGACACTGCCTACCACGTGACACTGCCTACCACGTGACACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181319.2 |
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| 3UTR CCA 90 bp | CCTAGAAGTGGAGTTATGAATGGTTGGGTGCCACCATGGGGATGCTaGGAAAAGACCTTGGGTCCTCTGCAAGAGCAACCAGTGATGTTA | + |
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Preference number: 1 (lower is better) Translates to: PRSGVMNGWVPPWGC*EKTLGPLQEQPVML Trigger: TAACATCACTGGTTGCTCTTGCAGAGGACCCAAGGTCTTTTCCCAGCATCCCCATGGTGGCACCCAACCATTCATAACTCCACTTCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR CCA 90 bp | AGTAAGTCGCCAAATGCACAGGTTGCAGTTAACTCAGGAAAATTTTaGAGGACCTGTTCAGCCTCTCAGCAGGTGGTAGGCAGTGTCACG | + |
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Preference number: 1 (lower is better) Translates to: SKSPNAQVAVNSGKF*RTCSASQQVVGSVT Trigger: CGTGACACTGCCTACCACCTGCTGAGAGGCTGAACAGGTCCTCCAAAATTTTCCTGAGTTAACTGCAACCTGTGCATTTGGCGACTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181319.2 |
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| 3UTR GCA 90 bp | TTTATGTATATGAGTGTTTTGCCTGTATGTATTTTGTGTACCATGTaGACTCCTGGTGCCTGTAGTGCTCACAAGAGGATGTTGGATGCC | + |
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Preference number: 1 (lower is better) Translates to: FMYMSVLPVCILCTM*TPGACSAHKRMLDA Trigger: GGCATCCAACATCCTCTTGTGAGCACTACAGGCACCAGGAGTGCACATGGTACACAAAATACATACAGGCAAAACACTCATATACATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR TCA 90 bp | AATATCCCAAGGACATGTTCACAGACCAGTAGGCAATTCTTCAATTaGGGTTCTTTCTTCCTAGGTGTCTTTAGTTTGTTTCAAGTTAAC | + |
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Preference number: 1 (lower is better) Translates to: NIPRTCSQTSRQFFN*GSFFLGVFSLFQVN Trigger: GTTAACTTGAAACAAACTAAAGACACCTAGGAAGAAAGAACCTCAATTGAAGAATTGCCTACTGGTCTGTGAACATGTCCTTGGGATATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR TCA 90 bp | TTACAAGATCTCTCCAGTATGAAACTGGTAGTATTGAAGAAGTGTTaGACTGTTAGTAAATTCCTTGAGATTCTGAGGGTTCTCTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: LQDLSSMKLVVLKKC*TVSKFLEILRVLFL Trigger: AAGGAAGAGAACCCTCAGAATCTCAAGGAATTTACTAACAGTTCAACACTTCTTCAATACTACCAGTTTCATACTGGAGAGATCTTGTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR CCA 90 bp | CTGAGGGTTCTCTTCCTTATCGTATTGAATTATAGTACTGAATTATaGGATAACATTATGGAAGGATTTGCAACAGAGGCTGTACTAATC | + |
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Preference number: 1 (lower is better) Translates to: LRVLFLIVLNYSTEL*DNIMEGFATEAVLI Trigger: GATTAGTACAGCCTCTGTTGCAAATCCTTCCATAATGTTATCCCATAATTCAGTACTATAATTCAATACGATAAGGAAGAGAACCCTCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR-3UTR CCA 90 bp | TTACTATCAGCTCTCTCCCTCCCCACCAGTCTCTTACTTACTTCCTTTATCATTGGTTGGGTGCCACCATaGGGATGCTGGGAAAAGACC | + |
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Preference number: 2 (lower is better) Translates to: LLSALSLPTSLLLTSFIIGWVPP*GCWEKT Trigger: GGTCTTTTCCCAGCATCCCCATGGTGGCACCCAACC...AATGATAAAGGAAGTAAGTAAGAGACTGGTGGGGAGGGAGAGAGCTGATAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR-3UTR CCA 90 bp | TTACTATCAGCTCTCTCCCTCCCCACCAGTCTCTTACTTACTTCCTTTATCATTCCACCATGGGGATGCTaGGAAAAGACCTTGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LLSALSLPTSLLLTSFIIPPWGC*EKTLGP Trigger: AGGACCCAAGGTCTTTTCCCAGCATCCCCATGGTGG...AATGATAAAGGAAGTAAGTAAGAGACTGGTGGGGAGGGAGAGAGCTGATAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR-3UTR TCA 90 bp | GGACAGGCCTCCCCTCATCAATCATTAATCAAGAAAATATCCCAAGGACATGTTGGCCTGTGGTACAAGTaGAGGCTTTGCCACAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: GQASPHQSLIKKISQGHVGLWYK*RLCHSL Trigger: AAGACTGTGGCAAAGCCTTCACTTGTACCACAGGCC...AACATGTCCTTGGGATATTTTCTTGATTAATGATTGATGAGGGGAGGCCTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTAACTTGCTTTCTTATACAATCCAGGACCACCTTCTCAGGGGTAGCACGAGGCAATTCTTCAATTaGGGTTCTTTCTTCCTAGGT | + |
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Preference number: 2 (lower is better) Translates to: SLNLLSYTIQDHLLRGSTRQFFN*GSFFLG Trigger: ACCTAGGAAGAAAGAACCTCAATTGAAGAATTGCCT...CGTGCTACCCCTGAGAAGGTGGTCCTGGATTGTATAAGAAAGCAAGTTAAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTAACTTGCTTTCTTATACAATCCAGGACCACCTTCTCAGGGGTAGCACGGTGCTTCATAAAGGATaGATAAATGCTAAAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: SLNLLSYTIQDHLLRGSTVLHKG*INAKGL Trigger: AAGGCCTTTAGCATTTATTCATCCTTTATGAAGCAC...CGTGCTACCCCTGAGAAGGTGGTCCTGGATTGTATAAGAAAGCAAGTTAAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR-3UTR GCA 90 bp | TCCCTTAACTTGCTTTCTTATACAATCCAGGACCACCTTCTCAGGGGTAGCACGCATTATGGAAGGATTTaGAACAGAGGCTGTACTAAT | + |
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Preference number: 2 (lower is better) Translates to: SLNLLSYTIQDHLLRGSTHYGRI*NRGCTN Trigger: ATTAGTACAGCCTCTGTTGCAAATCCTTCCATAATG...CGTGCTACCCCTGAGAAGGTGGTCCTGGATTGTATAAGAAAGCAAGTTAAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR-3UTR GCA 90 bp | TCATCAATCATTAATCAAGAAAATATCCCAAGGACATGTTCACAGACCAGTAGGCCCTCTCACAGGGGTTaGCTAAGACCATCAGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: SSIINQENIPRTCSQTSRPSHRG*LRPSES Trigger: GCTTTCTGATGGTCTTAGGCAACCCCTGTGAGAGGG...CCTACTGGTCTGTGAACATGTCCTTGGGATATTTTCTTGATTAATGATTGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR-3UTR TCA 90 bp | TATGAGTGTTTTGCCTGTATGTATTTTGTGTACCATGTGCACTCCTGGTGCCTGTTTAACTTGTGGGTTTaGCTTGTTTGGGGGTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: YECFACMYFVYHVHSWCLFNLWV*LVWGSN Trigger: ATTTGACCCCCAAACAAGTCAAACCCACAAGTTAAA...CAGGCACCAGGAGTGCACATGGTACACAAAATACATACAGGCAAAACACTCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR-3UTR CCA 90 bp | TGTTGTGATGCCAAGTTGTCAACACAGCCTTTTAACAGTAAGTCGCCAAATGCAAACTCAGGAAAATTTTaGAGGACCTGTTCAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: CCDAKLSTQPFNSKSPNANSGKF*RTCSAS Trigger: AGAGGCTGAACAGGTCCTCCAAAATTTTCCTGAGTT...TGCATTTGGCGACTTACTGTTAAAAGGCTGTGTTGACAACTTGGCATCACAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000181319.2 |
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| 3UTR-3UTR GCA 90 bp | TTACTATCAGCTCTCTCCCTCCCCACCAGTCTCTTACTTACTTCCTTTATCATTATTCGCAGATGCTTATaGAGGTATGAAGCAAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LLSALSLPTSLLLTSFIIIRRCL*RYEAKV Trigger: TACTTTTGCTTCATACCTGCATAAGCATCTGCGAAT...AATGATAAAGGAAGTAAGTAAGAGACTGGTGGGGAGGGAGAGAGCTGATAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTTATGTATTTGAAAATGTTCTTCCTGAGTCATTCGTTACATATGTACAGGAGGCTGTACTAATCTaGATTTTCTCTACTATGGAT | + |
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Preference number: 2 (lower is better) Translates to: QAYVFENVLPESFVTYVQEAVLI*IFSTMD Trigger: ATCCATAGTAGAGAAAATCCAGATTAGTACAGCCTC...CTGTACATATGTAACGAATGACTCAGGAAGAACATTTTCAAATACATAAGCCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTTATGTATTTGAAAATGTTCTTCCTGAGTCATTCGTTACATATGTACAGTATGGGATAACATTATaGAAGGATTTGCAACAGAGG | + |
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Preference number: 2 (lower is better) Translates to: QAYVFENVLPESFVTYVQYGITL*KDLQQR Trigger: CCTCTGTTGCAAATCCTTCCATAATGTTATCCCATA...CTGTACATATGTAACGAATGACTCAGGAAGAACATTTTCAAATACATAAGCCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR CCA 72 bp | GGAGTTATGAATGGTTGGGTGCCACCATGGGGATGCTaGGAAAAGACCTTGGGTCCTCTGCAAGAGCAACCA | + |
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Preference number: 3 (lower is better) Translates to: GVMNGWVPPWGC*EKTLGPLQEQP Trigger: TGGTTGCTCTTGCAGAGGACCCAAGGTCTTTTCCCAGCATCCCCATGGTGGCACCCAACCATTCATAACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR TCA 72 bp | CGTGGTAGGCAGTGTCACGTGGTAGGCAGTGTCACATaGAAGGAAACCAACTTAGTCACAAGAGCTGCACCG | + |
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Preference number: 3 (lower is better) Translates to: RGRQCHVVGSVT*KETNLVTRAAP Trigger: CGGTGCAGCTCTTGTGACTAAGTTGGTTTCCTTTCATGTGACACTGCCTACCACGTGACACTGCCTACCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181319.2 |
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| 3UTR-3UTR CAA 90 bp | TATGAGTGTTTTGCCTGTATGTATTTTGTGTACCATGTGCACTCCTGGTGCCTGGCTCACAAGAGGATGTaGGATGCCCTAGAAGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: YECFACMYFVYHVHSWCLAHKRM*DALEVE Trigger: CTCCACTTCTAGGGCATCCAACATCCTCTTGTGAGC...CAGGCACCAGGAGTGCACATGGTACACAAAATACATACAGGCAAAACACTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR-3UTR CAA 90 bp | TATGAGTGTTTTGCCTGTATGTATTTTGTGTACCATGTGCACTCCTGGTGCCTGTCATCATTAGGAGGGTaGAGAACCACTACTTTAGAT | + |
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Preference number: 3 (lower is better) Translates to: YECFACMYFVYHVHSWCLSSLGG*RTTTLD Trigger: ATCTAAAGTAGTGGTTCTCAACCCTCCTAATGATGA...CAGGCACCAGGAGTGCACATGGTACACAAAATACATACAGGCAAAACACTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR TCA 72 bp | CTCTCCAGTATGAAACTGGTAGTATTGAAGAAGTGTTaGACTGTTAGTAAATTCCTTGAGATTCTGAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: LSSMKLVVLKKC*TVSKFLEILRV Trigger: AACCCTCAGAATCTCAAGGAATTTACTAACAGTTCAACACTTCTTCAATACTACCAGTTTCATACTGGAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| 3UTR CCA 72 bp | CTCTTCCTTATCGTATTGAATTATAGTACTGAATTATaGGATAACATTATGGAAGGATTTGCAACAGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: LFLIVLNYSTEL*DNIMEGFATEA Trigger: AGCCTCTGTTGCAAATCCTTCCATAATGTTATCCCATAATTCAGTACTATAATTCAATACGATAAGGAAGAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| CDS-3UTR GCA 90 bp | GACCTGTTCAGCCTCTCAGCAGGTGGTAGGCAGTGTCACGTGGTAGGCAGTGTCGTATGTGCCTACACTTaGCTGTGTCTTCACATTCCA | + |
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Preference number: 4 (lower is better) Translates to: DLFSLSAGGRQCHVVGSVVCAYT*LCLHIP Trigger: TGGAATGTGAAGACACAGGCAAGTGTAGGCACATAC...GACACTGCCTACCACGTGACACTGCCTACCACCTGCTGAGAGGCTGAACAGGTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181319.2 |
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| CDS-3UTR TCA 90 bp | CACAGGAGGAACTGTTTTAAGGGTTCATCATTAGGAGGGTTGAGAACCACTACTCAATGGCCACATCTCTaGATGACAGCAGTTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: HRRNCFKGSSLGGLRTTTQWPHL*MTAVSP Trigger: TGGAGAAACTGCTGTCATTCAGAGATGTGGCCATTG...AGTAGTGGTTCTCAACCCTCCTAATGATGAACCCTTAAAACAGTTCCTCCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| CDS-3UTR TCA 90 bp | GGACAGGCCTCCCCTCATCAATCATTAATCAAGAAAATATCCCAAGGACATGTTGTCGTTCCAGAAATGTaGTCAGGTGTGGCTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: GQASPHQSLIKKISQGHVVVPEM*SGVAWR Trigger: TCTCCAAGCCACACCTGATCACATTTCTGGAACGAC...AACATGTCCTTGGGATATTTTCTTGATTAATGATTGATGAGGGGAGGCCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| CDS-3UTR TCA 90 bp | AACAGTAAGTCGCCAAATGCACAGGTTGCAGTTAACTCAGGAAAATTTTGGAGGGTCGTTCCAGAAATGTaGTCAGGTGTGGCTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: NSKSPNAQVAVNSGKFWRVVPEM*SGVAWR Trigger: TCTCCAAGCCACACCTGATCACATTTCTGGAACGAC...CCTCCAAAATTTTCCTGAGTTAACTGCAACCTGTGCATTTGGCGACTTACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181319.2 |
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| 3UTR CAA 72 bp | GACTTGTTTGGGGGTCAAATAACCCTCTCACAGGGGTaGCCTAAGACCATCAGAAAGCACAGATATTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: DLFGGQITLSQG*PKTIRKHRYSD Trigger: ATCAGAATATCTGTGCTTTCTGATGGTCTTAGGCAACCCCTGTGAGAGGGTTATTTGACCCCCAAACAAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| CDS-3UTR TCA 90 bp | TCAACACAGCCTTTTAACAGTAAGTCGCCAAATGCACAGGTTGCAGTTAACTCACAATGGCCACATCTCTaGATGACAGCAGTTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: STQPFNSKSPNAQVAVNSQWPHL*MTAVSP Trigger: TGGAGAAACTGCTGTCATTCAGAGATGTGGCCATTG...TGAGTTAACTGCAACCTGTGCATTTGGCGACTTACTGTTAAAAGGCTGTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181319.2 |
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| CDS-3UTR GCA 90 bp | CACAGGAGGAACTGTTTTAAGGGTTCATCATTAGGAGGGTTGAGAACCACTACTGTATGTGCCTACACTTaGCTGTGTCTTCACATTCCA | + |
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Preference number: 4 (lower is better) Translates to: HRRNCFKGSSLGGLRTTTVCAYT*LCLHIP Trigger: TGGAATGTGAAGACACAGGCAAGTGTAGGCACATAC...AGTAGTGGTTCTCAACCCTCCTAATGATGAACCCTTAAAACAGTTCCTCCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| CDS-3UTR CCA 90 bp | CACAGGAGGAACTGTTTTAAGGGTTCATCATTAGGAGGGTTGAGAACCACTACTAAATGTGATCAGGTGTaGCTTGGAGAAAGCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: HRRNCFKGSSLGGLRTTTKCDQV*LGESKT Trigger: GGTCTTGCTTTCTCCAAGCCACACCTGATCACATTT...AGTAGTGGTTCTCAACCCTCCTAATGATGAACCCTTAAAACAGTTCCTCCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| CDS-3UTR CCA 90 bp | CAACACAGCCTTTTAACAGTAAGTCGCCAAATGCACAGGTTGCAGTTAACTCAGAAATGTGATCAGGTGTaGCTTGGAGAAAGCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: QHSLLTVSRQMHRLQLTQKCDQV*LGESKT Trigger: GGTCTTGCTTTCTCCAAGCCACACCTGATCACATTT...CTGAGTTAACTGCAACCTGTGCATTTGGCGACTTACTGTTAAAAGGCTGTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181319.2 |
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| CDS-3UTR TCA 90 bp | TTACTATCAGCTCTCTCCCTCCCCACCAGTCTCTTACTTACTTCCTTTATCATTGTGCTGAACAAGCAGTaGTTTCCAACCAAAAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LLSALSLPTSLLLTSFIIVLNKQ*FPTKSL Trigger: AAGGCTTTTGGTTGGAAATCACTGCTTGTTCAGCAC...AATGATAAAGGAAGTAAGTAAGAGACTGGTGGGGAGGGAGAGAGCTGATAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| CDS-3UTR TCA 90 bp | CACAGGAGGAACTGTTTTAAGGGTTCATCATTAGGAGGGTTGAGAACCACTACTATTTGTTGGTGTTGGTaGAGGCTAGAAGAACAGTTA | + |
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Preference number: 4 (lower is better) Translates to: HRRNCFKGSSLGGLRTTTICWCW*RLEEQL Trigger: TAACTGTTCTTCTAGCCTTCACCAACACCAACAAAT...AGTAGTGGTTCTCAACCCTCCTAATGATGAACCCTTAAAACAGTTCCTCCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| CDS-3UTR GCA 90 bp | CAGGCTTATGTATTTGAAAATGTTCTTCCTGAGTCATTCGTTACATATGTACAGGTATGGGTTCCCCGGTaGTTAGAAAGAATGCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: QAYVFENVLPESFVTYVQVWVPR*LERMQR Trigger: TCGCTGCATTCTTTCTAAGCACCGGGGAACCCATAC...CTGTACATATGTAACGAATGACTCAGGAAGAACATTTTCAAATACATAAGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| CDS-3UTR TCA 90 bp | CAGGCTTATGTATTTGAAAATGTTCTTCCTGAGTCATTCGTTACATATGTACAGGTGAACAGTAAGTCCTaGATAGTTAGTAAAAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: QAYVFENVLPESFVTYVQVNSKS*IVSKSS Trigger: AGAGCTTTTACTAACTATTCAGGACTTACTGTTCAC...CTGTACATATGTAACGAATGACTCAGGAAGAACATTTTCAAATACATAAGCCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| CDS-3UTR CAA 90 bp | GTGTCACGTGGTAGGCAGTGTCACATGAAAGGAAACCAACTTAGTCACAAGAGCGTGATCAGGTGTGGCTaGGAGAAAGCAAGACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: VSRGRQCHMKGNQLSHKSVIRCG*EKARPR Trigger: CCTGGGTCTTGCTTTCTCCAAGCCACACCTGATCAC...GCTCTTGTGACTAAGTTGGTTTCCTTTCATGTGACACTGCCTACCACGTGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181319.2 |
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| CDS-3UTR CAA 90 bp | TCATCAATCATTAATCAAGAAAATATCCCAAGGACATGTTCACAGACCAGTAGGGTGATCAGGTGTGGCTaGGAGAAAGCAAGACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SSIINQENIPRTCSQTSRVIRCG*EKARPR Trigger: CCTGGGTCTTGCTTTCTCCAAGCCACACCTGATCAC...CCTACTGGTCTGTGAACATGTCCTTGGGATATTTTCTTGATTAATGATTGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| CDS-3UTR CAA 90 bp | TTACTATCAGCTCTCTCCCTCCCCACCAGTCTCTTACTTACTTCCTTTATCATTTCCCCTATGAATTTGTaGGTGTTGGTGAAGGCTAGA | + |
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Preference number: 5 (lower is better) Translates to: LLSALSLPTSLLLTSFIISPMNL*VLVKAR Trigger: TCTAGCCTTCACCAACACCAACAAATTCATAGGGGA...AATGATAAAGGAAGTAAGTAAGAGACTGGTGGGGAGGGAGAGAGCTGATAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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| CDS-3UTR CAA 90 bp | ATTCGCAGATGCTTATGCAGGTATGAAGCAAAAGTAAAGGCCTGGCCACATTCAATGAATTTGTTGGTGTaGGTGAAGGCTAGAAGAACA | + |
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Preference number: 5 (lower is better) Translates to: IRRCLCRYEAKVKAWPHSMNLLV*VKARRT Trigger: TGTTCTTCTAGCCTTCACCAACACCAACAAATTCAT...TGAATGTGGCCAGGCCTTTACTTTTGCTTCATACCTGCATAAGCATCTGCGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164936.10 |
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