Pregenerated sensors for ZFP488 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044519Ensembl transcript IDs: ENSMUST00000166737.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCGCCTGGGGACCTCATTCCGAGGACCCTCCACTTGCTCTTTCCTaGCCTACTCAGAACCACAAGGATGAATGGCACCTGGATAAAATC | + |
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Preference number: 1 (lower is better) Translates to: AAWGPHSEDPPLALS*PTQNHKDEWHLDKI Trigger: GATTTTATCCAGGTGCCATTCATCCTTGTGGTTCTGAGTAGGGCAGGAAAGAGCAAGTGGAGGGTCCTCGGAATGAGGTCCCCAGGCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR GCA 90 bp | GCTTGCTCATCAGCAAAGCCACGATGTCATACTCATGTGCTTCCTTaGAGAGTACTGGGGACAGAGACAGGAGCAGCCCTGTTCCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: ACSSAKPRCHTHVLP*RVLGTETGAALFPE Trigger: CTCAGGGAACAGGGCTGCTCCTGTCTCTGTCCCCAGTACTCTGCAAGGAAGCACATGAGTATGACATCGTGGCTTTGCTGATGAGCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR GCA 90 bp | GAGTGCAGGCTTGCTCATCAGCAAAGCCACGATGTCATACTCATGTaGTTCCTTGCAGAGTACTGGGGACAGAGACAGGAGCAGCCCTGT | + |
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Preference number: 1 (lower is better) Translates to: ECRLAHQQSHDVILM*FLAEYWGQRQEQPC Trigger: ACAGGGCTGCTCCTGTCTCTGTCCCCAGTACTCTGCAAGGAAGCACATGAGTATGACATCGTGGCTTTGCTGATGAGCAAGCCTGCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR TCA 90 bp | AGCATAATGACCCAGCAGCAAAAGGGCCTAGACTTGAGTGCAGCTTaGGCTATGTCCACCAAGCCATCCCCAGCCTTGTGGCAGAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: SIMTQQQKGLDLSAA*AMSTKPSPALWQRN Trigger: GTTTCTCTGCCACAAGGCTGGGGATGGCTTGGTGGACATAGCTCAAGCTGCACTCAAGTCTAGGCCCTTTTGCTGCTGGGTCATTATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR TCA 90 bp | AGTAGGATGAGAATTCACTGTCTGTGTCCTACAGATGAGAGGATGTaGAGTGCCGCCTGGGGACCTCATTCCGAGGACCCTCCACTTGCT | + |
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Preference number: 1 (lower is better) Translates to: SRMRIHCLCPTDERM*SAAWGPHSEDPPLA Trigger: AGCAAGTGGAGGGTCCTCGGAATGAGGTCCCCAGGCGGCACTTCACATCCTCTCATCTGTAGGACACAGACAGTGAATTCTCATCCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR GCA 90 bp | TATATCCAGCATAATGACCCAGCAGCAAAAGGGCCTAGACTTGAGTaGAGCTTGAGCTATGTCCACCAAGCCATCCCCAGCCTTGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: YIQHNDPAAKGPRLE*SLSYVHQAIPSLVA Trigger: TGCCACAAGGCTGGGGATGGCTTGGTGGACATAGCTCAAGCTGCACTCAAGTCTAGGCCCTTTTGCTGCTGGGTCATTATGCTGGATATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR TCA 90 bp | GGGTGGGACTTCCAGAGGACACCTGGGAACCCAGCATGCTTATTCTaGGGGACTGTGTCACTAACAAGTCCTAAGTCACCGGCTTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: GWDFQRTPGNPACLF*GTVSLTSPKSPAFK Trigger: TTTAAAAGCCGGTGACTTAGGACTTGTTAGTGACACAGTCCCTCAGAATAAGCATGCTGGGTTCCCAGGTGTCCTCTGGAAGTCCCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR CCA 90 bp | GACATGAAGCGGCTGGAAAGACCTGAGCTCAGATCTGGGGCTTCATaGGATTTTGTTCTTCCACCAATGCTCCTGACAAAGTGGTGTTGG | + |
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Preference number: 1 (lower is better) Translates to: DMKRLERPELRSGAS*DFVLPPMLLTKWCW Trigger: CCAACACCACTTTGTCAGGAGCATTGGTGGAAGAACAAAATCCCATGAAGCCCCAGATCTGAGCTCAGGTCTTTCCAGCCGCTTCATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR GCA 90 bp | ATCAGTGCCAATGTGTGGGCTCAAGGTAAGTGTGCTTTTGACAGATaGCACCTCTTGTTCCTCAAAGCCAACTCAAGAGTTGGCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: ISANVWAQGKCAFDR*HLLFLKANSRVGRS Trigger: GCTCCTGCCAACTCTTGAGTTGGCTTTGAGGAACAAGAGGTGGCATCTGTCAAAAGCACACTTACCTTGAGCCCACACATTGGCACTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR CCA 90 bp | CATTCCCCTTTCCAAAGAGATGGCATAGAAATCAGTGCCAATGTGTaGGCTCAAGGTAAGTGTGCTTTTGACAGATGCCACCTCTTGTTC | + |
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Preference number: 1 (lower is better) Translates to: HSPFQRDGIEISANV*AQGKCAFDRCHLLF Trigger: GAACAAGAGGTGGCATCTGTCAAAAGCACACTTACCTTGAGCCCACACATTGGCACTGATTTCTATGCCATCTCTTTGGAAAGGGGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR TCA 90 bp | GAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTaGGATGAAAGGATGGACCATGTAGAGACTGCCATATCCAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: EQNTHGRSYRDKVWS*DERMDHVETAISRD Trigger: ATCCCTGGATATGGCAGTCTCTACATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR TCA 90 bp | GAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTaGGGTAACACAATCACAAAGGAACTCACACAATATGTACTCACT | + |
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Preference number: 1 (lower is better) Translates to: EIPSQMDGPGGHHPE*GNTITKELTQYVLT Trigger: AGTGAGTACATATTGTGTGAGTTCCTTTGTGATTGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR CCA 90 bp | TGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAA | + |
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Preference number: 1 (lower is better) Translates to: CSTMFIAALFIIARS*KEPRCPSTEEWIQK Trigger: TTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR GCA 90 bp | ATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATaGCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTAC | + |
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Preference number: 1 (lower is better) Translates to: IAALFIIARSWKEPR*PSTEEWIQKMWYIY Trigger: GTAGATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR CCA 90 bp | TTGCTCTTTCCTGCCCTACTCAGAACCACAAGGATGAATGGCACCTaGATAAAATCCAGAATAAATGATGTGTGTTCTGTTTCTCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: LLFPALLRTTRMNGT*IKSRINDVCSVSLF Trigger: GAAGAGAGAAACAGAACACACATCATTTATTCTGGATTTTATCCAGGTGCCATTCATCCTTGTGGTTCTGAGTAGGGCAGGAAAGAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR GCA 90 bp | AGTGGTGTTGGGAAAGTCAATAGCCTTTTTAAGTTGAAATTCATCTaGAGTAGGATGAGAATTCACTGTCTGTGTCCTACAGATGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: SGVGKVNSLFKLKFI*SRMRIHCLCPTDER Trigger: CCTCTCATCTGTAGGACACAGACAGTGAATTCTCATCCTACTGCAGATGAATTTCAACTTAAAAAGGCTATTGACTTTCCCAACACCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR TCA 90 bp | ACTGTGTCACTAACAAGTCCTAAGTCACCGGCTTTTAAACATCTTTaGACTTGTAAATCTGGCTGCAAAGCAACTTGTGTCAACATCAAT | + |
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Preference number: 1 (lower is better) Translates to: TVSLTSPKSPAFKHL*TCKSGCKATCVNIN Trigger: ATTGATGTTGACACAAGTTGCTTTGCAGCCAGATTTACAAGTTCAAAGATGTTTAAAAGCCGGTGACTTAGGACTTGTTAGTGACACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR GCA 90 bp | TTTTATTCTAGAGAGGAGAGCTACAGTGGACAGGATAAGTCGCTATaGTATTTAGTATACAAGATGGAGAAAAGTGCTCAAGAGAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: FYSREESYSGQDKSL*YLVYKMEKSAQEKS Trigger: ACTCTTCTCTTGAGCACTTTTCTCCATCTTGTATACTAAATAGCATAGCGACTTATCCTGTCCACTGTAGCTCTCCTCTCTAGAATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR CAA 90 bp | GGATGTGAAGTGCCGCCTGGGGACCTCATTCCGAGGACCCTCCACTaGCTCTTTCCTGCCCTACTCAGAACCACAAGGATGAATGGCACC | + |
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Preference number: 2 (lower is better) Translates to: GCEVPPGDLIPRTLH*LFPALLRTTRMNGT Trigger: GGTGCCATTCATCCTTGTGGTTCTGAGTAGGGCAGGAAAGAGCAAGTGGAGGGTCCTCGGAATGAGGTCCCCAGGCGGCACTTCACATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAAGCAGCCCTGTTCCCTaGGCCATGGGTCCCACTATC | + |
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Preference number: 2 (lower is better) Translates to: AKWMDLEGIILSEVTQSQSSPVP*AMGPTI Trigger: GATAGTGGGACCCATGGCTCAGGGAACAGGGCTGCT...TTGTGATTGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR CAA 90 bp | CAGCATAATGACCCAGCAGCAAAAGGGCCTAGACTTGAGTGCAGCTaGAGCTATGTCCACCAAGCCATCCCCAGCCTTGTGGCAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: QHNDPAAKGPRLECS*SYVHQAIPSLVAEK Trigger: TTTCTCTGCCACAAGGCTGGGGATGGCTTGGTGGACATAGCTCAAGCTGCACTCAAGTCTAGGCCCTTTTGCTGCTGGGTCATTATGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAAGACAGGAGAGGGGGTaGGACTTCCAGAGGACACCT | + |
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Preference number: 2 (lower is better) Translates to: AKWMDLEGIILSEVTQSQRQERG*DFQRTP Trigger: AGGTGTCCTCTGGAAGTCCCACCCCCTCTCCTGTCT...TTGTGATTGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR GCA 90 bp | GCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAGTGTGCACATGCGCGTaGATGAGCACGTGTACGTCT | + |
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Preference number: 2 (lower is better) Translates to: AKWMDLEGIILSEVTQSQVCTCA*MSTCTS Trigger: AGACGTACACGTGCTCATGCACGCGCATGTGCACAC...TTGTGATTGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTAGCCAACTCAAGAGTTaGCAGGAGCAAAGCCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: TGLPMEELEKVAKELKGSSQLKS*QEQSQS Trigger: ACTCTGGCTTTGCTCCTGCCAACTCTTGAGTTGGCT...AGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAAAAGTGCTCAAGAGAAGAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTCCTACAGATaGGAGGATGTGAAGTGCCGC | + |
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Preference number: 2 (lower is better) Translates to: EKSAQEKSGVCVCVCVCVSVSYR*EDVKCR Trigger: GCGGCACTTCACATCCTCTCATCTGTAGGACACAGA...CACACACACACACACACACACACACACACCACTCTTCTCTTGAGCACTTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTTGCTCAAGAGAAGAGTaGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: TGLPMEELEKVAKELKGSCSREE*CVCVCV Trigger: CACACACACACACACACACCACTCTTCTCTTGAGCA...AGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTCTCGTGAGGGCCATTTTCTAGTTCAGAGATTGCTCTTTTTAGCTGCGTCTCTAGCTAAGCAGACATaGAGCGGCTGGAAAGACCTG | + |
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Preference number: 2 (lower is better) Translates to: VSREGHFLVQRLLFLAASLAKQT*SGWKDL Trigger: CAGGTCTTTCCAGCCGCTTCATGTCTGCTTAGCTAG...AGACGCAGCTAAAAAGAGCAATCTCTGAACTAGAAAATGGCCCTCACGAGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTCGGTATTTTCCACTCTaGGCTTCACTATATCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: TGLPMEELEKVAKELKGSRYFPL*ASLYPA Trigger: TGCTGGATATAGTGAAGCCCAGAGTGGAAAATACCG...AGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTAGATCTGGGGCTTCATaGGATTTTGTTCTTCCACCA | + |
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Preference number: 2 (lower is better) Translates to: TGLPMEELEKVAKELKGSRSGAS*DFVLPP Trigger: TGGTGGAAGAACAAAATCCCATGAAGCCCCAGATCT...AGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR CAA 90 bp | AAGTTGGAATTGAACTTAAGGAGCCCAGCCTCAAAGTTCCAGACCTaGAGTCACTTAGTACGCTCCATGGCCATGCTAGCTAAGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: KLELNLRSPASKFQT*SHLVRSMAMLAKQT Trigger: TGTCTGCTTAGCTAGCATGGCCATGGAGCGTACTAAGTGACTCAAGGTCTGGAACTTTGAGGCTGGGCTCCTTAAGTTCAATTCCAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAAGTTTGGAGCTGAGATaGAAGGATGGACCATGTAGA | + |
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Preference number: 2 (lower is better) Translates to: AKWMDLEGIILSEVTQSQSLELR*KDGPCR Trigger: TCTACATGGTCCATCCTTTCATCTCAGCTCCAAACT...TTGTGATTGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAGCAAAGCCAGAGTCAGGCAGATCGTTCATTTGTTAACTTATGTGTTTATTGCCGGTAGTCACCTGTaGCTCACCACTGTGTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RSKARVRQIVHLLTYVFIAGSHL*LTTVSW Trigger: CCAGGACACAGTGGTGAGGCACAGGTGACTACCGGC...AATAAACACATAAGTTAACAAATGAACGATCTGCCTGACTCTGGCTTTGCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTTTATTCTAGAGAGGAGAGCTACAGTGGACAGGATAAGTCGCTATGCTATTTCCTTGCAGAGTACTaGGGACAGAGACAGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PFYSREESYSGQDKSLCYFLAEY*GQRQEQ Trigger: CTGCTCCTGTCTCTGTCCCCAGTACTCTGCAAGGAA...ATAGCATAGCGACTTATCCTGTCCACTGTAGCTCTCCTCTCTAGAATAAAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTCCCTTTCCAAAGAGATaGCATAGAAATCAGTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: TGLPMEELEKVAKELKGSPFPKR*HRNQCQ Trigger: TTGGCACTGATTTCTATGCCATCTCTTTGGAAAGGG...AGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTTTATTCTAGAGAGGAGAGCTACAGTGGACAGGATAAGTCGCTATGCTATCCACTTGCTCTTTCCTaGCCTACTCAGAACCACAAG | + |
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Preference number: 2 (lower is better) Translates to: PFYSREESYSGQDKSLCYPLALS*PTQNHK Trigger: CTTGTGGTTCTGAGTAGGGCAGGAAAGAGCAAGTGG...ATAGCATAGCGACTTATCCTGTCCACTGTAGCTCTCCTCTCTAGAATAAAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAGCTGTGGGGGACTTTTaGTATAACATTGGAAATGTA | + |
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Preference number: 2 (lower is better) Translates to: AKWMDLEGIILSEVTQSQAVGDF*YNIGNV Trigger: TACATTTCCAATGTTATACCAAAAGTCCCCCACAGC...TTGTGATTGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAACCACAAGGATGAATGGCACCTGGATAAAATCCAGAATAAATGATGTGACTCATGTGCTTCCTTaGAGAGTACTGGGGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: LRTTRMNGTWIKSRINDVTHVLP*RVLGTE Trigger: CTCTGTCCCCAGTACTCTGCAAGGAAGCACATGAGT...CACATCATTTATTCTGGATTTTATCCAGGTGCCATTCATCCTTGTGGTTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTCTCGTGAGGGCCATTTTCTAGTTCAGAGATTGCTCTTTTTAGCTGCGTCTAAACACAGAAGTGGATaGTCACAGTCAGCTAATGGA | + |
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Preference number: 2 (lower is better) Translates to: VSREGHFLVQRLLFLAASKHRSG*SQSANG Trigger: TCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTT...AGACGCAGCTAAAAAGAGCAATCTCTGAACTAGAAAATGGCCCTCACGAGAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR GCA 90 bp | CTCGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCGAAGTGTGGACACTATaGCCCTCCTTAGAATTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LDTCSTMFIAALFIIARSEVWTL*PSLELG Trigger: TCCCAATTCTAAGGAGGGGCATAGTGTCCACACTTC...GCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGCAAAGCCAGAGTCAGGCAGATCGTTCATTTGTTAACTTATGTGTTTATTGAGGCCTGGGACACCTaGCAAATTATAACTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RSKARVRQIVHLLTYVFIEAWDT*QIITEQ Trigger: CTGCTCAGTTATAATTTGTCAGGTGTCCCAGGCCTC...AATAAACACATAAGTTAACAAATGAACGATCTGCCTGACTCTGGCTTTGCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTCGTGAGGGCCATTTTCTAGTTCAGAGATTGCTCTTTTTAGCTGCGTCTGGTACATCTACACAATaGAGTACTACTCAGCTATTA | + |
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Preference number: 2 (lower is better) Translates to: VSREGHFLVQRLLFLAASGTSTQ*STTQLL Trigger: TAATAGCTGAGTAGTACTCCATTGTGTAGATGTACC...AGACGCAGCTAAAAAGAGCAATCTCTGAACTAGAAAATGGCCCTCACGAGAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR TCA 90 bp | CTCGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCGCTTTTAAACATCTTTaGACTTGTAAATCTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LDTCSTMFIAALFIIARSAFKHL*TCKSGC Trigger: GCAGCCAGATTTACAAGTTCAAAGATGTTTAAAAGC...GCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGCAAAGCCAGAGTCAGGCAGATCGTTCATTTGTTAACTTATGTGTTTATTCTGACAAATTATAACTaGGCAGTTCATGTCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: RSKARVRQIVHLLTYVFILTNYN*AVHVWE Trigger: TTCCCAGACATGAACTGCTCAGTTATAATTTGTCAG...AATAAACACATAAGTTAACAAATGAACGATCTGCCTGACTCTGGCTTTGCTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR CCA 72 bp | GAGACAGGAGAGGGGGTGGGACTTCCAGAGGACACCTaGGAACCCAGCATGCTTATTCTGAGGGACTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: ETGEGVGLPEDT*EPSMLILRDCV Trigger: GACACAGTCCCTCAGAATAAGCATGCTGGGTTCCCAGGTGTCCTCTGGAAGTCCCACCCCCTCTCCTGTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR TCA 72 bp | ACCCAGCAGCAAAAGGGCCTAGACTTGAGTGCAGCTTaGGCTATGTCCACCAAGCCATCCCCAGCCTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: TQQQKGLDLSAA*AMSTKPSPALW Trigger: CCACAAGGCTGGGGATGGCTTGGTGGACATAGCTCAAGCTGCACTCAAGTCTAGGCCCTTTTGCTGCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR CCA 72 bp | AAGGCCGGTAGTCACCTGTGCCTCACCACTGTGTCCTaGATACTATGGCCATCGGTTTCCTCTGTAGCCACC | + |
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Preference number: 3 (lower is better) Translates to: KAGSHLCLTTVS*ILWPSVSSVAT Trigger: GGTGGCTACAGAGGAAACCGATGGCCATAGTATCCAGGACACAGTGGTGAGGCACAGGTGACTACCGGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR GCA 72 bp | GGACCTCATTCCGAGGACCCTCCACTTGCTCTTTCCTaGCCTACTCAGAACCACAAGGATGAATGGCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: GPHSEDPPLALS*PTQNHKDEWHL Trigger: CAGGTGCCATTCATCCTTGTGGTTCTGAGTAGGGCAGGAAAGAGCAAGTGGAGGGTCCTCGGAATGAGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR TCA 72 bp | AGAATTCACTGTCTGTGTCCTACAGATGAGAGGATGTaGAGTGCCGCCTGGGGACCTCATTCCGAGGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: RIHCLCPTDERM*SAAWGPHSEDP Trigger: AGGGTCCTCGGAATGAGGTCCCCAGGCGGCACTTCACATCCTCTCATCTGTAGGACACAGACAGTGAATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR TCA 72 bp | TTAGTACGCTCCATGGCCATGCTAGCTAAGCAGACATaGAGCGGCTGGAAAGACCTGAGCTCAGATCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LVRSMAMLAKQT*SGWKDLSSDLG Trigger: CCCCAGATCTGAGCTCAGGTCTTTCCAGCCGCTTCATGTCTGCTTAGCTAGCATGGCCATGGAGCGTACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR GCA 72 bp | CATAATGACCCAGCAGCAAAAGGGCCTAGACTTGAGTaGAGCTTGAGCTATGTCCACCAAGCCATCCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: HNDPAAKGPRLE*SLSYVHQAIPS Trigger: GCTGGGGATGGCTTGGTGGACATAGCTCAAGCTGCACTCAAGTCTAGGCCCTTTTGCTGCTGGGTCATTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR GCA 72 bp | TGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATaGCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: WKERPIGLANFI*PSTGERQGQKG Trigger: CCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR TCA 72 bp | TTCCAGAGGACACCTGGGAACCCAGCATGCTTATTCTaGGGGACTGTGTCACTAACAAGTCCTAAGTCACCG | + |
|
Preference number: 3 (lower is better) Translates to: FQRTPGNPACLF*GTVSLTSPKSP Trigger: CGGTGACTTAGGACTTGTTAGTGACACAGTCCCTCAGAATAAGCATGCTGGGTTCCCAGGTGTCCTCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR GCA 72 bp | CTTGCTCATCAGCAAAGCCACGATGTCATACTCATGTaGTTCCTTGCAGAGTACTGGGGACAGAGACAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LAHQQSHDVILM*FLAEYWGQRQE Trigger: CTCCTGTCTCTGTCCCCAGTACTCTGCAAGGAAGCACATGAGTATGACATCGTGGCTTTGCTGATGAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR CCA 72 bp | ATGCCACCTCTTGTTCCTCAAAGCCAACTCAAGAGTTaGCAGGAGCAAAGCCAGAGTCAGGCAGATCGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: MPPLVPQSQLKS*QEQSQSQADRS Trigger: TGAACGATCTGCCTGACTCTGGCTTTGCTCCTGCCAACTCTTGAGTTGGCTTTGAGGAACAAGAGGTGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCCCGAGGACCCTCCACTaGCTCTTTCCTGCCCTACTC | + |
|
Preference number: 3 (lower is better) Translates to: LDTCSTMFIAALFIIARSPRTLH*LFPALL Trigger: GAGTAGGGCAGGAAAGAGCAAGTGGAGGGTCCTCGG...GCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAGGGCTTCATGGGATTTaGTTCTTCCACCAATGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: AKWMDLEGIILSEVTQSQGLHGI*FFHQCS Trigger: GGAGCATTGGTGGAAGAACAAAATCCCATGAAGCCC...TTGTGATTGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR GCA 72 bp | GGGCCATTTTCTAGTTCAGAGATTGCTCTTTTTAGCTaGGTCTTCAGAGAGACAGTGAGGAGCTTGCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GPFSSSEIALFS*VFRETVRSLPS Trigger: AGAGGGCAAGCTCCTCACTGTCTCTCTGAAGACGCAGCTAAAAAGAGCAATCTCTGAACTAGAAAATGGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCAAGCCATCCCCAGCCTaGTGGCAGAGAAACACAATG | + |
|
Preference number: 3 (lower is better) Translates to: LDTCSTMFIAALFIIARSKPSPA*WQRNTM Trigger: CATTGTGTTTCTCTGCCACAAGGCTGGGGATGGCTT...GCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCAAGCCAACTCAAGAGTaGGCAGGAGCAAAGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LDTCSTMFIAALFIIARSKPTQE*AGAKPE Trigger: CTCTGGCTTTGCTCCTGCCAACTCTTGAGTTGGCTT...GCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR CCA 72 bp | TATGCTATGACAGGACCATTCCCCTTTCCAAAGAGATaGCATAGAAATCAGTGCCAATGTGTGGGCTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: YAMTGPFPFPKR*HRNQCQCVGSR Trigger: CCTTGAGCCCACACATTGGCACTGATTTCTATGCCATCTCTTTGGAAAGGGGAATGGTCCTGTCATAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTGTTCCTCAAAGCCAACTCAAGAGTTGGCAGGAGCAAAGCCAGAGTCAGGAGAGAAACACAATGTTaGTTCATCCCTGAGATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LLFLKANSRVGRSKARVRRETQC*FIPEIS Trigger: TGAAATCTCAGGGATGAACAAACATTGTGTTTCTCT...CCTGACTCTGGCTTTGCTCCTGCCAACTCTTGAGTTGGCTTTGAGGAACAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR TCA 72 bp | TGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATaGAAGGATGGACCATGTAGAGACTGCCATATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: WKELQRQSLELR*KDGPCRDCHIQ Trigger: CTGGATATGGCAGTCTCTACATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR TCA 72 bp | ACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTaGGATGAAAGGATGGACCATGTAGAGACTGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: THGRSYRDKVWS*DERMDHVETAI Trigger: TATGGCAGTCTCTACATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR TCA 72 bp | AGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTaGGGTAACACAATCACAAAGGAACTCACACAATAT | + |
|
Preference number: 3 (lower is better) Translates to: SQMDGPGGHHPE*GNTITKELTQY Trigger: ATATTGTGTGAGTTCCTTTGTGATTGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR GCA 72 bp | AATGTGTGGGCTCAAGGTAAGTGTGCTTTTGACAGATaGCACCTCTTGTTCCTCAAAGCCAACTCAAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: NVWAQGKCAFDR*HLLFLKANSRV Trigger: AACTCTTGAGTTGGCTTTGAGGAACAAGAGGTGGCATCTGTCAAAAGCACACTTACCTTGAGCCCACACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR CCA 72 bp | TTCCAAAGAGATGGCATAGAAATCAGTGCCAATGTGTaGGCTCAAGGTAAGTGTGCTTTTGACAGATGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: FQRDGIEISANV*AQGKCAFDRCH Trigger: GTGGCATCTGTCAAAAGCACACTTACCTTGAGCCCACACATTGGCACTGATTTCTATGCCATCTCTTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR TCA 72 bp | ACGCTGAGACCATTGCATACACTAGCAAGATTTTATTaGAAGGACCCAGATGTAGCTGTCTCTTGTGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: TLRPLHTLARFY*KDPDVAVSCET Trigger: AGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCAATAAAATCTTGCTAGTGTATGCAATGGTCTCAGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR CCA 72 bp | CCTGCCCTACTCAGAACCACAAGGATGAATGGCACCTaGATAAAATCCAGAATAAATGATGTGTGTTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PALLRTTRMNGT*IKSRINDVCSV Trigger: AACAGAACACACATCATTTATTCTGGATTTTATCCAGGTGCCATTCATCCTTGTGGTTCTGAGTAGGGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR TCA 72 bp | GTGTCAACATCAATTCTAAGCATCTTCTGTATGCTATaGCAGGACCATTCCCCTTTCCAAAGAGATGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: VSTSILSIFCML*QDHSPFQRDGI Trigger: TATGCCATCTCTTTGGAAAGGGGAATGGTCCTGTCATAGCATACAGAAGATGCTTAGAATTGATGTTGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR TCA 72 bp | TTTGCTAAACACATGAAACTCAAGAAGAATGAAGACTaGAGTGTGGACACTATGCCCCTCCTTAGAATTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FAKHMKLKKNED*SVDTMPLLRIG Trigger: CCCAATTCTAAGGAGGGGCATAGTGTCCACACTTCAGTCTTCATTCTTCTTGAGTTTCATGTGTTTAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR GCA 72 bp | AATGAAAGACCTAAGTTGGGAAGTCATGGTTTAAAGTaGCTTCTCGACACATGCTCCACTATGTTCATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: NERPKLGSHGLK*LLDTCSTMFIA Trigger: TGCTATGAACATAGTGGAGCATGTGTCGAGAAGGCACTTTAAACCATGACTTCCCAACTTAGGTCTTTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGCAAAGCCAGAGTCAGGCAGATCGTTCATTTGTTAACTTATGTGTTTATTCCTGACAAAGTGGTGTaGGGAAAGTCAATAGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RSKARVRQIVHLLTYVFIPDKVV*GKSIAF Trigger: AAAGGCTATTGACTTTCCCAACACCACTTTGTCAGG...AATAAACACATAAGTTAACAAATGAACGATCTGCCTGACTCTGGCTTTGCTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAACACACCACTTTCAAAATAAAAGTGAGGTTCAGCAAGCTAAAGGAACAGGTGCAAAAGGAACAACCTaGAAGAAGTCTATGACAACC | + |
|
Preference number: 3 (lower is better) Translates to: LTHHFQNKSEVQQAKGTGAKGTT*KKSMTT Trigger: GGTTGTCATAGACTTCTTCAAGGTTGTTCCTTTTGC...ACCTGTTCCTTTAGCTTGCTGAACCTCACTTTTATTTTGAAAGTGGTGTGTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR TCA 72 bp | CTAACAAGTCCTAAGTCACCGGCTTTTAAACATCTTTaGACTTGTAAATCTGGCTGCAAAGCAACTTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LTSPKSPAFKHL*TCKSGCKATCV Trigger: GACACAAGTTGCTTTGCAGCCAGATTTACAAGTTCAAAGATGTTTAAAAGCCGGTGACTTAGGACTTGTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR TCA 72 bp | CACTATCCCATGAGTGAAGCTTATCACTTTAATGCATaGCTAAACATATTGTGCATTAAACACATCACGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HYPMSEAYHFNA*LNILCIKHITR Trigger: CCTCGTGATGTGTTTAATGCACAATATGTTTAGTCATGCATTAAAGTGATAAGCTTCACTCATGGGATAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR CAA 72 bp | GTGCCGCCTGGGGACCTCATTCCGAGGACCCTCCACTaGCTCTTTCCTGCCCTACTCAGAACCACAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VPPGDLIPRTLH*LFPALLRTTRM Trigger: CATCCTTGTGGTTCTGAGTAGGGCAGGAAAGAGCAAGTGGAGGGTCCTCGGAATGAGGTCCCCAGGCGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR TCA 90 bp | GCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAACTCGAGGGCAGCTGCTaGGGGCCGAGCTGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKWMDLEGIILSEVTQSQLEGSC*GPSWPS Trigger: AGAAGGCCAGCTCGGCCCTCAGCAGCTGCCCTCGAG...TTGTGATTGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTTTCCTCGTCTGGGCCTaGATGTCCCCTGGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGLPMEELEKVAKELKGSFLVWA*MSPGLS Trigger: GGAGAGGCCAGGGGACATCCAGGCCCAGACGAGGAA...AGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR CAA 72 bp | GACCCAGCAGCAAAAGGGCCTAGACTTGAGTGCAGCTaGAGCTATGTCCACCAAGCCATCCCCAGCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DPAAKGPRLECS*SYVHQAIPSLV Trigger: CACAAGGCTGGGGATGGCTTGGTGGACATAGCTCAAGCTGCACTCAAGTCTAGGCCCTTTTGCTGCTGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCTCTGTGTATGCCTTaGAGGCCCGAGGCCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGLPMEELEKVAKELKGSALCMP*RPEACP Trigger: TGGACAGGCCTCGGGCCTGCAAGGCATACACAGAGC...AGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCTCCAGCCATGGTGTaGGAGCCCCCTGGAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TGLPMEELEKVAKELKGSAPAMV*EPPGKH Trigger: ATGCTTTCCAGGGGGCTCCCACACCATGGCTGGAGC...AGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR TCA 90 bp | CTCTTGTTCCTCAAAGCCAACTCAAGAGTTGGCAGGAGCAAAGCCAGAGTCAGGGTGATCAGCAGGGCCTaGCAGGCTAAGCAAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLFLKANSRVGRSKARVRVISRA*QAKQGG Trigger: TCCACCTTGCTTAGCCTGTCAGGCCCTGCTGATCAC...CCTGACTCTGGCTTTGCTCCTGCCAACTCTTGAGTTGGCTTTGAGGAACAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR TCA 90 bp | GCCAACTCAAGAGTTGGCAGGAGCAAAGCCAGAGTCAGGCAGATCGTTCATTTGCATCACCTGAGGCTCTaGGGAAACTCGAGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ANSRVGRSKARVRQIVHLHHLRL*GNSRAA Trigger: AGCTGCCCTCGAGTTTCCTCAGAGCCTCAGGTGATG...CAAATGAACGATCTGCCTGACTCTGGCTTTGCTCCTGCCAACTCTTGAGTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCTCGTGAGGGCCATTTTCTAGTTCAGAGATTGCTCTTTTTAGCTGCGTCTTCCAGCTTCCTCGTCTaGGCCTGGATGTCCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSREGHFLVQRLLFLAASSSFLV*AWMSPG Trigger: GCCAGGGGACATCCAGGCCCAGACGAGGAAGCTGGA...AGACGCAGCTAAAAAGAGCAATCTCTGAACTAGAAAATGGCCCTCACGAGAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR CCA 90 bp | GCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAGGTGTGGGAGCCCCCTaGAAAGCATTGCAGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AKWMDLEGIILSEVTQSQGVGAP*KALQRR Trigger: TCTCCTCTGCAATGCTTTCCAGGGGGCTCCCACACC...TTGTGATTGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR CAA 72 bp | GATGCCACCTCTTGTTCCTCAAAGCCAACTCAAGAGTaGGCAGGAGCAAAGCCAGAGTCAGGCAGATCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DATSCSSKPTQE*AGAKPESGRSF Trigger: GAACGATCTGCCTGACTCTGGCTTTGCTCCTGCCAACTCTTGAGTTGGCTTTGAGGAACAAGAGGTGGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR TCA 90 bp | ATGGAGAAAAGTGCTCAAGAGAAGAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTCCATCTCTTCTCAACTaGAGGCCTCAGAGGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MEKSAQEKSGVCVCVCVCPSLLN*RPQRSP Trigger: GGGGCTCCTCTGAGGCCTTCAGTTGAGAAGAGATGG...ACACACACACACACACACACACACACCACTCTTCTCTTGAGCACTTTTCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAGTGCTCAAGAGAAGAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATCCCTGCCTGGGTCTaGTTGGGTTCCATGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EKSAQEKSGVCVCVCVCVIPAWV*LGSMSF Trigger: GAAGCTCATGGAACCCAAGCAGACCCAGGCAGGGAT...CACACACACACACACACACACACACACACCACTCTTCTCTTGAGCACTTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAGTGCTCAAGAGAAGAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGAGGCTTGTTCGGTaGTGTTGGCAGGCTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EKSAQEKSGVCVCVCVCVSRLVR*CWQAQF Trigger: GAACTGAGCCTGCCAACAGCACCGAACAAGCCTCGA...CACACACACACACACACACACACACACACCACTCTTCTCTTGAGCACTTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR TCA 90 bp | CCAGATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGACATGATAGCTCTGTaGAGGTATTGTGCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PDVAVSCETMPGPSKHRSDMIAL*RYCASA Trigger: AGCAGAGGCACAATACCTTCACAGAGCTATCATGTC...ACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTCTTTCCTGCCCTACTCAGAACCACAAGGATGAATGGCACCTGGATAAAACACTGTGCCATCACCTaGGGCTCTGAGGAAACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLFPALLRTTRMNGTWIKHCAIT*GSEETR Trigger: TCGAGTTTCCTCAGAGCCTCAGGTGATGGCACAGTG...TTTTATCCAGGTGCCATTCATCCTTGTGGTTCTGAGTAGGGCAGGAAAGAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR CCA 90 bp | CTCGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCGCCGAGCTGGCCTTCTaGGTTCTCCAGCTTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LDTCSTMFIAALFIIARSAELAF*VLQLPR Trigger: ACGAGGAAGCTGGAGAACCCAGAAGGCCAGCTCGGC...GCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| 3UTR CAA 72 bp | TTGAACTTAAGGAGCCCAGCCTCAAAGTTCCAGACCTaGAGTCACTTAGTACGCTCCATGGCCATGCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNLRSPASKFQT*SHLVRSMAMLA Trigger: AGCTAGCATGGCCATGGAGCGTACTAAGTGACTCAAGGTCTGGAACTTTGAGGCTGGGCTCCTTAAGTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR TCA 90 bp | GTCTCTCGTGAGGGCCATTTTCTAGTTCAGAGATTGCTCTTTTTAGCTGCGTCTGGCAAACGGGGCAAGTaGGAACTTCCTCTCTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSREGHFLVQRLLFLAASGKRGK*ELPLFV Trigger: AACGAAGAGAGGAAGTTCTCACTTGCCCCGTTTGCC...AGACGCAGCTAAAAAGAGCAATCTCTGAACTAGAAAATGGCCCTCACGAGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCTCGTGAGGGCCATTTTCTAGTTCAGAGATTGCTCTTTTTAGCTGCGTCTCTATGTGAAGCCATATaGCTGGACAGATGGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VSREGHFLVQRLLFLAASLCEAI*LDRWWR Trigger: GCGCCACCATCTGTCCAGGCATATGGCTTCACATAG...AGACGCAGCTAAAAAGAGCAATCTCTGAACTAGAAAATGGCCCTCACGAGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR CCA 90 bp | GTCTCTCGTGAGGGCCATTTTCTAGTTCAGAGATTGCTCTTTTTAGCTGCGTCTCTTAGGTTTCTCTGCTaGGCGTTTGGCTGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSREGHFLVQRLLFLAASLRFLC*AFGWLA Trigger: AGCAAGCCAGCCAAACGCCCAGCAGAGAAACCTAAG...AGACGCAGCTAAAAAGAGCAATCTCTGAACTAGAAAATGGCCCTCACGAGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR CCA 90 bp | CTCAGAACCACAAGGATGAATGGCACCTGGATAAAATCCAGAATAAATGATGTGTGCCTGGACAGATGGTaGCGCTCCCGGAAGTACTCG | + |
|
Preference number: 4 (lower is better) Translates to: LRTTRMNGTWIKSRINDVCLDRW*RSRKYS Trigger: CGAGTACTTCCGGGAGCGCCACCATCTGTCCAGGCA...CACATCATTTATTCTGGATTTTATCCAGGTGCCATTCATCCTTGTGGTTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR CCA 90 bp | CTCAGAACCACAAGGATGAATGGCACCTGGATAAAATCCAGAATAAATGATGTGTCCCCTGGCCTCTCCTaGAGACATGATAGCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRTTRMNGTWIKSRINDVSPGLS*RHDSSV Trigger: CACAGAGCTATCATGTCTCCAGGAGAGGCCAGGGGA...CACATCATTTATTCTGGATTTTATCCAGGTGCCATTCATCCTTGTGGTTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR TCA 90 bp | AAATTCATCTGCAGTAGGATGAGAATTCACTGTCTGTGTCCTACAGATGAGAGGTTCCCTTTTGTGATGTaGCCGCATGTGGAAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: KFICSRMRIHCLCPTDERFPFVM*PHVEDQ Trigger: CTGGTCTTCCACATGCGGTCACATCACAAAAGGGAA...CCTCTCATCTGTAGGACACAGACAGTGAATTCTCATCCTACTGCAGATGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR GCA 90 bp | AGGAGCAAAGCCAGAGTCAGGCAGATCGTTCATTTGTTAACTTATGTGTTTATTTCAGAGGAGCCCCTTTaGCCTCAGCCATGTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSKARVRQIVHLLTYVFISEEPL*PQPCDQ Trigger: CTGATCACATGGCTGAGGGCAAAGGGGCTCCTCTGA...AATAAACACATAAGTTAACAAATGAACGATCTGCCTGACTCTGGCTTTGCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR TCA 90 bp | AAATTCATCTGCAGTAGGATGAGAATTCACTGTCTGTGTCCTACAGATGAGAGGTCTGCTTGGGTTCCATaGGCTTCCATCTCTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KFICSRMRIHCLCPTDERSAWVP*ASISSQ Trigger: TTGAGAAGAGATGGAAGCTCATGGAACCCAAGCAGA...CCTCTCATCTGTAGGACACAGACAGTGAATTCTCATCCTACTGCAGATGAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR TCA 90 bp | AGGAGCAAAGCCAGAGTCAGGCAGATCGTTCATTTGTTAACTTATGTGTTTATTTTCGCACACCAGTTCTaGGTAGACAAGCCCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSKARVRQIVHLLTYVFIFAHQF*VDKPKE Trigger: CTCCTTGGGCTTGTCTACTCAGAACTGGTGTGCGAA...AATAAACACATAAGTTAACAAATGAACGATCTGCCTGACTCTGGCTTTGCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR GCA 90 bp | CTCAGAACCACAAGGATGAATGGCACCTGGATAAAATCCAGAATAAATGATGTGTTTCTTGAACATCCCTaGCTGGGTCTGCTTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRTTRMNGTWIKSRINDVFLEHP*LGLLGF Trigger: GAACCCAAGCAGACCCAGGCAGGGATGTTCAAGAAA...CACATCATTTATTCTGGATTTTATCCAGGTGCCATTCATCCTTGTGGTTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR GCA 90 bp | AGGAGCAAAGCCAGAGTCAGGCAGATCGTTCATTTGTTAACTTATGTGTTTATTTTGGCTACCCTTTCCTaGAGCAGTGTCAGAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSKARVRQIVHLLTYVFILATLS*SSVRVH Trigger: GTGGACTCTGACACTGCTGCAGGAAAGGGTAGCCAA...AATAAACACATAAGTTAACAAATGAACGATCTGCCTGACTCTGGCTTTGCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR GCA 90 bp | CTAACACACCACTTTCAAAATAAAAGTGAGGTTCAGCAAGCTAAAGGAACAGGTGGCGAAAGGCTAGGTTaGACTTCGCACACCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTHHFQNKSEVQQAKGTGGERLG*TSHTSS Trigger: AGAACTGGTGTGCGAAGTGCAACCTAGCCTTTCGCC...ACCTGTTCCTTTAGCTTGCTGAACCTCACTTTTATTTTGAAAGTGGTGTGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR CCA 90 bp | CTAACACACCACTTTCAAAATAAAAGTGAGGTTCAGCAAGCTAAAGGAACAGGTAAGGAGCTGAGGATGTaGGGGCTTGTACCTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LTHHFQNKSEVQQAKGTGKELRM*GLVPGY Trigger: ATACCCAGGTACAAGCCCCCACATCCTCAGCTCCTT...ACCTGTTCCTTTAGCTTGCTGAACCTCACTTTTATTTTGAAAGTGGTGTGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR TCA 90 bp | AGGAGCAAAGCCAGAGTCAGGCAGATCGTTCATTTGTTAACTTATGTGTTTATTGTTTGGCTGGCTTGCTaGAAGCACTTTTCTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSKARVRQIVHLLTYVFIVWLAC*KHFSAH Trigger: GTGAGCAGAAAAGTGCTTTCAGCAAGCCAGCCAAAC...AATAAACACATAAGTTAACAAATGAACGATCTGCCTGACTCTGGCTTTGCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR GCA 90 bp | AGGAGCAAAGCCAGAGTCAGGCAGATCGTTCATTTGTTAACTTATGTGTTTATTCCCCCTGGAAAGCATTaGAGAGGAGAATGTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSKARVRQIVHLLTYVFIPPGKH*RGECSV Trigger: CACAGAACATTCTCCTCTGCAATGCTTTCCAGGGGG...AATAAACACATAAGTTAACAAATGAACGATCTGCCTGACTCTGGCTTTGCTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR CCA 90 bp | AGGAGCAAAGCCAGAGTCAGGCAGATCGTTCATTTGTTAACTTATGTGTTTATTCAGATGAGCCCAATATaGGATGTCCACAGTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RSKARVRQIVHLLTYVFIQMSPI*DVHSGD Trigger: ATCACCACTGTGGACATCCCATATTGGGCTCATCTG...AATAAACACATAAGTTAACAAATGAACGATCTGCCTGACTCTGGCTTTGCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR TCA 90 bp | CTAACACACCACTTTCAAAATAAAAGTGAGGTTCAGCAAGCTAAAGGAACAGGTGAGGAGAATGTTCTGTaGCAATGTGTGCAATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTHHFQNKSEVQQAKGTGEENVL*QCVQFP Trigger: TGGAAATTGCACACATTGTCACAGAACATTCTCCTC...ACCTGTTCCTTTAGCTTGCTGAACCTCACTTTTATTTTGAAAGTGGTGTGTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR GCA 90 bp | AGGAGCAAAGCCAGAGTCAGGCAGATCGTTCATTTGTTAACTTATGTGTTTATTTTCTGTGACAATGTGTaGAATTTCCAGAAATCACCC | + |
|
Preference number: 4 (lower is better) Translates to: RSKARVRQIVHLLTYVFIFCDNV*NFQKSP Trigger: GGGTGATTTCTGGAAATTGCACACATTGTCACAGAA...AATAAACACATAAGTTAACAAATGAACGATCTGCCTGACTCTGGCTTTGCTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| 3UTR CAA 72 bp | CAAAGTGGTGTTGGGAAAGTCAATAGCCTTTTTAAGTaGAAATTCATCTGCAGTAGGATGAGAATTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSGVGKVNSLFK*KFICSRMRIHC Trigger: ACAGTGAATTCTCATCCTACTGCAGATGAATTTCAACTTAAAAAGGCTATTGACTTTCCCAACACCACTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS CCA 90 bp | TCTGAGGAAACTCGAGGGCAGCTGCTGAGGGCCGAGCTGGCCTTCTaGGTTCTCCAGCTTCCTCGTCTGGGCCTGGATGTCCCCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SEETRGQLLRAELAF*VLQLPRLGLDVPWP Trigger: AGGCCAGGGGACATCCAGGCCCAGACGAGGAAGCTGGAGAACCCAGAAGGCCAGCTCGGCCCTCAGCAGCTGCCCTCGAGTTTCCTCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS TCA 90 bp | ACTGTGCCATCACCTGAGGCTCTGAGGAAACTCGAGGGCAGCTGCTaGGGGCCGAGCTGGCCTTCTGGGTTCTCCAGCTTCCTCGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TVPSPEALRKLEGSC*GPSWPSGFSSFLVW Trigger: CCAGACGAGGAAGCTGGAGAACCCAGAAGGCCAGCTCGGCCCTCAGCAGCTGCCCTCGAGTTTCCTCAGAGCCTCAGGTGATGGCACAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS GCA 90 bp | GCTGTGGAGGAAGGAGCTGAGGATGTGGGGGCTTGTACCTGGGTATaGTCCAGCCATGGTGTGGGAGCCCCCTGGAAAGCATTGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AVEEGAEDVGACTWV*SSHGVGAPWKALQR Trigger: CCTCTGCAATGCTTTCCAGGGGGCTCCCACACCATGGCTGGAGCATACCCAGGTACAAGCCCCCACATCCTCAGCTCCTTCCTCCACAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS TCA 90 bp | GGGCCTGGATGTCCCCTGGCCTCTCCTGGAGACATGATAGCTCTGTaGAGGTATTGTGCCTCTGCTCTGTGTATGCCTTGCAGGCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPGCPLASPGDMIAL*RYCASALCMPCRPE Trigger: CTCGGGCCTGCAAGGCATACACAGAGCAGAGGCACAATACCTTCACAGAGCTATCATGTCTCCAGGAGAGGCCAGGGGACATCCAGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS GCA 90 bp | GTATGCCTTGCAGGCCCGAGGCCTGTCCAGTCGAGGCTTGTTCGGTaGTGTTGGCAGGCTCAGTTCAGTATAGGCCTCATCTTGGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: VCLAGPRPVQSRLVR*CWQAQFSIGLILAT Trigger: GGTAGCCAAGATGAGGCCTATACTGAACTGAGCCTGCCAACAGCACCGAACAAGCCTCGACTGGACAGGCCTCGGGCCTGCAAGGCATAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS TCA 90 bp | TCAGCTGTCAGGCGAAAGGCTAGGTTGCACTTCGCACACCAGTTCTaGGTAGACAAGCCCAAGGAGGAGAGTGTGGGCGGCAAGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SAVRRKARLHFAHQF*VDKPKEESVGGKRA Trigger: GGCTCTCTTGCCGCCCACACTCTCCTCCTTGGGCTTGTCTACTCAGAACTGGTGTGCGAAGTGCAACCTAGCCTTTCGCCTGACAGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS GCA 90 bp | TCCCCTGGCCTCTCCTGGAGACATGATAGCTCTGTGAAGGTATTGTaGCTCTGCTCTGTGTATGCCTTGCAGGCCCGAGGCCTGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPGLSWRHDSSVKVL*LCSVYALQARGLSS Trigger: ACTGGACAGGCCTCGGGCCTGCAAGGCATACACAGAGCAGAGGCACAATACCTTCACAGAGCTATCATGTCTCCAGGAGAGGCCAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS TCA 90 bp | TTCTCAACTGAAGGCCTCAGAGGAGCCCCTTTGCCCTCAGCCATGTaGTCAGCAGGGCCTGACAGGCTAAGCAAGGTGGATGTTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSTEGLRGAPLPSAM*SAGPDRLSKVDVPA Trigger: TGCTGGAACATCCACCTTGCTTAGCCTGTCAGGCCCTGCTGATCACATGGCTGAGGGCAAAGGGGCTCCTCTGAGGCCTTCAGTTGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS TCA 90 bp | TGCCTGGGTCTGCTTGGGTTCCATGAGCTTCCATCTCTTCTCAACTaGAGGCCTCAGAGGAGCCCCTTTGCCCTCAGCCATGTGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLGLLGFHELPSLLN*RPQRSPFALSHVIS Trigger: GCTGATCACATGGCTGAGGGCAAAGGGGCTCCTCTGAGGCCTTCAGTTGAGAAGAGATGGAAGCTCATGGAACCCAAGCAGACCCAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS CCA 90 bp | TTCTCCAGCTTCCTCGTCTGGGCCTGGATGTCCCCTGGCCTCTCCTaGAGACATGATAGCTCTGTGAAGGTATTGTGCCTCTGCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSSFLVWAWMSPGLS*RHDSSVKVLCLCSV Trigger: CACAGAGCAGAGGCACAATACCTTCACAGAGCTATCATGTCTCCAGGAGAGGCCAGGGGACATCCAGGCCCAGACGAGGAAGCTGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS TCA 90 bp | CTTCGTTTCTTAGAATGTGGGTCAGGGCCCACGTGTTCCCTTTTGTaGTGTGACCGCATGTGGAAGACCAGGTCAGCTGTCAGGCGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRFLECGSGPTCSLL*CDRMWKTRSAVRRK Trigger: CTTTCGCCTGACAGCTGACCTGGTCTTCCACATGCGGTCACATCACAAAAGGGAACACGTGGGCCCTGACCCACATTCTAAGAAACGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR CAA 90 bp | GCCAACTCAAGAGTTGGCAGGAGCAAAGCCAGAGTCAGGCAGATCGTTCATTTGAGGCGAAAGGCTAGGTaGCACTTCGCACACCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ANSRVGRSKARVRQIVHLRRKAR*HFAHQF Trigger: GAACTGGTGTGCGAAGTGCAACCTAGCCTTTCGCCT...CAAATGAACGATCTGCCTGACTCTGGCTTTGCTCCTGCCAACTCTTGAGTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS GCA 90 bp | TCAGAGTCCACAAGGCTCATTTTCTTGAACATCCCTGCCTGGGTCTaGTTGGGTTCCATGAGCTTCCATCTCTTCTCAACTGAAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SESTRLIFLNIPAWV*LGSMSFHLFSTEGL Trigger: GAGGCCTTCAGTTGAGAAGAGATGGAAGCTCATGGAACCCAAGCAGACCCAGGCAGGGATGTTCAAGAAAATGAGCCTTGTGGACTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS GCA 90 bp | CCTGGGTATGCTCCAGCCATGGTGTGGGAGCCCCCTGGAAAGCATTaGAGAGGAGAATGTTCTGTGACAATGTGTGCAATTTCCAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PGYAPAMVWEPPGKH*RGECSVTMCAISRN Trigger: ATTTCTGGAAATTGCACACATTGTCACAGAACATTCTCCTCTGCAATGCTTTCCAGGGGGCTCCCACACCATGGCTGGAGCATACCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR CAA 90 bp | CTCTTGTTCCTCAAAGCCAACTCAAGAGTTGGCAGGAGCAAAGCCAGAGTCAGGAGCTCTGTGAAGGTATaGTGCCTCTGCTCTGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LLFLKANSRVGRSKARVRSSVKV*CLCSVY Trigger: ATACACAGAGCAGAGGCACAATACCTTCACAGAGCT...CCTGACTCTGGCTTTGCTCCTGCCAACTCTTGAGTTGGCTTTGAGGAACAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR CAA 90 bp | GAGAAAAGTGCTCAAGAGAAGAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCCCCCTGGAAAGCATaGCAGAGGAGAATGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EKSAQEKSGVCVCVCVCVAPWKA*QRRMFC Trigger: ACAGAACATTCTCCTCTGCAATGCTTTCCAGGGGGC...CACACACACACACACACACACACACACACCACTCTTCTCTTGAGCACTTTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR CAA 90 bp | GTCTCTCGTGAGGGCCATTTTCTAGTTCAGAGATTGCTCTTTTTAGCTGCGTCTACAAGGCTCATTTTCTaGAACATCCCTGCCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSREGHFLVQRLLFLAASTRLIF*NIPAWV Trigger: GACCCAGGCAGGGATGTTCAAGAAAATGAGCCTTGT...AGACGCAGCTAAAAAGAGCAATCTCTGAACTAGAAAATGGCCCTCACGAGAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS TCA 90 bp | TGGTGTGGGAGCCCCCTGGAAAGCATTGCAGAGGAGAATGTTCTGTaGCAATGTGTGCAATTTCCAGAAATCACCCATGAACTTGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: WCGSPLESIAEENVL*QCVQFPEITHELES Trigger: ACTTTCAAGTTCATGGGTGATTTCTGGAAATTGCACACATTGTCACAGAACATTCTCCTCTGCAATGCTTTCCAGGGGGCTCCCACACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS-3UTR CAA 90 bp | CTAACACACCACTTTCAAAATAAAAGTGAGGTTCAGCAAGCTAAAGGAACAGGTAGTATAGGCCTCATCTaGGCTACCCTTTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LTHHFQNKSEVQQAKGTGSIGLI*ATLSCS Trigger: GCTGCAGGAAAGGGTAGCCAAGATGAGGCCTATACT...ACCTGTTCCTTTAGCTTGCTGAACCTCACTTTTATTTTGAAAGTGGTGTGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS CCA 72 bp | ACTCGAGGGCAGCTGCTGAGGGCCGAGCTGGCCTTCTaGGTTCTCCAGCTTCCTCGTCTGGGCCTGGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: TRGQLLRAELAF*VLQLPRLGLDV Trigger: GACATCCAGGCCCAGACGAGGAAGCTGGAGAACCCAGAAGGCCAGCTCGGCCCTCAGCAGCTGCCCTCGAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS CCA 72 bp | CCGAGCTGGCCTTCTGGGTTCTCCAGCTTCCTCGTCTaGGCCTGGATGTCCCCTGGCCTCTCCTGGAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: PSWPSGFSSFLV*AWMSPGLSWRH Trigger: ATGTCTCCAGGAGAGGCCAGGGGACATCCAGGCCCAGACGAGGAAGCTGGAGAACCCAGAAGGCCAGCTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS TCA 72 bp | TCACCTGAGGCTCTGAGGAAACTCGAGGGCAGCTGCTaGGGGCCGAGCTGGCCTTCTGGGTTCTCCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SPEALRKLEGSC*GPSWPSGFSSF Trigger: GAAGCTGGAGAACCCAGAAGGCCAGCTCGGCCCTCAGCAGCTGCCCTCGAGTTTCCTCAGAGCCTCAGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS GCA 72 bp | GCAGGCCCGAGGCCTGTCCAGTCGAGGCTTGTTCGGTaGTGTTGGCAGGCTCAGTTCAGTATAGGCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: AGPRPVQSRLVR*CWQAQFSIGLI Trigger: GATGAGGCCTATACTGAACTGAGCCTGCCAACAGCACCGAACAAGCCTCGACTGGACAGGCCTCGGGCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS CCA 72 bp | TGGCCTTCTGGGTTCTCCAGCTTCCTCGTCTGGGCCTaGATGTCCCCTGGCCTCTCCTGGAGACATGATAGC | + |
|
Preference number: 6 (lower is better) Translates to: WPSGFSSFLVWA*MSPGLSWRHDS Trigger: GCTATCATGTCTCCAGGAGAGGCCAGGGGACATCCAGGCCCAGACGAGGAAGCTGGAGAACCCAGAAGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS CCA 72 bp | GGATGTGGGGGCTTGTACCTGGGTATGCTCCAGCCATaGTGTGGGAGCCCCCTGGAAAGCATTGCAGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GCGGLYLGMLQP*CGSPLESIAEE Trigger: CTCCTCTGCAATGCTTTCCAGGGGGCTCCCACACCATGGCTGGAGCATACCCAGGTACAAGCCCCCACATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS TCA 72 bp | GAAGGCCTCAGAGGAGCCCCTTTGCCCTCAGCCATGTaGTCAGCAGGGCCTGACAGGCTAAGCAAGGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: EGLRGAPLPSAM*SAGPDRLSKVD Trigger: ATCCACCTTGCTTAGCCTGTCAGGCCCTGCTGATCACATGGCTGAGGGCAAAGGGGCTCCTCTGAGGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS TCA 72 bp | AGGCGAAAGGCTAGGTTGCACTTCGCACACCAGTTCTaGGTAGACAAGCCCAAGGAGGAGAGTGTGGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRKARLHFAHQF*VDKPKEESVGG Trigger: GCCGCCCACACTCTCCTCCTTGGGCTTGTCTACTCAGAACTGGTGTGCGAAGTGCAACCTAGCCTTTCGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS TCA 72 bp | ATGTGGGTCAGGGCCCACGTGTTCCCTTTTGTGATGTaGCCGCATGTGGAAGACCAGGTCAGCTGTCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: MWVRAHVFPFVM*PHVEDQVSCQA Trigger: CGCCTGACAGCTGACCTGGTCTTCCACATGCGGTCACATCACAAAAGGGAACACGTGGGCCCTGACCCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
||
| CDS CCA 72 bp | GGGAGAGCGCTTAGGTTTCTCTGCTGGGCGTTTGGCTaGCTTGCTGAAAGCACTTTTCTGCTCACTCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRALRFLCWAFG*LAESTFLLTPG Trigger: CCCCGGAGTGAGCAGAAAAGTGCTTTCAGCAAGCCAGCCAAACGCCCAGCAGAGAAACCTAAGCGCTCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS CCA 72 bp | TTCCTCGTCTGGGCCTGGATGTCCCCTGGCCTCTCCTaGAGACATGATAGCTCTGTGAAGGTATTGTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: FLVWAWMSPGLS*RHDSSVKVLCL Trigger: GAGGCACAATACCTTCACAGAGCTATCATGTCTCCAGGAGAGGCCAGGGGACATCCAGGCCCAGACGAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS TCA 72 bp | CTGCTTGGGTTCCATGAGCTTCCATCTCTTCTCAACTaGAGGCCTCAGAGGAGCCCCTTTGCCCTCAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LLGFHELPSLLN*RPQRSPFALSH Trigger: ATGGCTGAGGGCAAAGGGGCTCCTCTGAGGCCTTCAGTTGAGAAGAGATGGAAGCTCATGGAACCCAAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS TCA 72 bp | TGTCCCCTGGCCTCTCCTGGAGACATGATAGCTCTGTaGAGGTATTGTGCCTCTGCTCTGTGTATGCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: CPLASPGDMIAL*RYCASALCMPC Trigger: GCAAGGCATACACAGAGCAGAGGCACAATACCTTCACAGAGCTATCATGTCTCCAGGAGAGGCCAGGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS CCA 72 bp | AGCCAGAAGCATGGGAGAGCGCTTAGGTTTCTCTGCTaGGCGTTTGGCTGGCTTGCTGAAAGCACTTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SQKHGRALRFLC*AFGWLAESTFL Trigger: CAGAAAAGTGCTTTCAGCAAGCCAGCCAAACGCCCAGCAGAGAAACCTAAGCGCTCTCCCATGCTTCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS CAA 72 bp | CCTGCAGCAGTGTCAGAGTCCACAAGGCTCATTTTCTaGAACATCCCTGCCTGGGTCTGCTTGGGTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: PAAVSESTRLIF*NIPAWVCLGSM Trigger: CATGGAACCCAAGCAGACCCAGGCAGGGATGTTCAAGAAAATGAGCCTTGTGGACTCTGACACTGCTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS CAA 72 bp | AGCATGGGAGAGCGCTTAGGTTTCTCTGCTGGGCGTTaGGCTGGCTTGCTGAAAGCACTTTTCTGCTCACTC | + |
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Preference number: 6 (lower is better) Translates to: SMGERLGFSAGR*AGLLKALFCSL Trigger: GAGTGAGCAGAAAAGTGCTTTCAGCAAGCCAGCCAAACGCCCAGCAGAGAAACCTAAGCGCTCTCCCATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS GCA 72 bp | GCTCCAGCCATGGTGTGGGAGCCCCCTGGAAAGCATTaGAGAGGAGAATGTTCTGTGACAATGTGTGCAATT | + |
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Preference number: 6 (lower is better) Translates to: APAMVWEPPGKH*RGECSVTMCAI Trigger: AATTGCACACATTGTCACAGAACATTCTCCTCTGCAATGCTTTCCAGGGGGCTCCCACACCATGGCTGGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS CAA 90 bp | CTACCCTTTCCTGCAGCAGTGTCAGAGTCCACAAGGCTCATTTTCTaGAACATCCCTGCCTGGGTCTGCTTGGGTTCCATGAGCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LPFPAAVSESTRLIF*NIPAWVCLGSMSFH Trigger: ATGGAAGCTCATGGAACCCAAGCAGACCCAGGCAGGGATGTTCAAGAAAATGAGCCTTGTGGACTCTGACACTGCTGCAGGAAAGGGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS CAA 90 bp | GAGTCCACAAGGCTCATTTTCTTGAACATCCCTGCCTGGGTCTGCTaGGGTTCCATGAGCTTCCATCTCTTCTCAACTGAAGGCCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: ESTRLIFLNIPAWVC*GSMSFHLFSTEGLR Trigger: TCTGAGGCCTTCAGTTGAGAAGAGATGGAAGCTCATGGAACCCAAGCAGACCCAGGCAGGGATGTTCAAGAAAATGAGCCTTGTGGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS CAA 72 bp | AGGCTCATTTTCTTGAACATCCCTGCCTGGGTCTGCTaGGGTTCCATGAGCTTCCATCTCTTCTCAACTGAA | + |
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Preference number: 6 (lower is better) Translates to: RLIFLNIPAWVC*GSMSFHLFSTE Trigger: TTCAGTTGAGAAGAGATGGAAGCTCATGGAACCCAAGCAGACCCAGGCAGGGATGTTCAAGAAAATGAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS TCA 72 bp | AGCCCCCTGGAAAGCATTGCAGAGGAGAATGTTCTGTaGCAATGTGTGCAATTTCCAGAAATCACCCATGAA | + |
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Preference number: 6 (lower is better) Translates to: SPLESIAEENVL*QCVQFPEITHE Trigger: TTCATGGGTGATTTCTGGAAATTGCACACATTGTCACAGAACATTCTCCTCTGCAATGCTTTCCAGGGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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| CDS GCA 72 bp | AAAGCATTGCAGAGGAGAATGTTCTGTGACAATGTGTaGAATTTCCAGAAATCACCCATGAACTTGAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: KALQRRMFCDNV*NFQKSPMNLKV Trigger: AACTTTCAAGTTCATGGGTGATTTCTGGAAATTGCACACATTGTCACAGAACATTCTCCTCTGCAATGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166737.2 |
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