Pregenerated sensors for ZFP472 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053600Ensembl transcript IDs: ENSMUST00000039132.9, ENSMUST00000234770.2
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGTTGCCATCTTACAGAAAGCATGGAGACCCAAATTATCCTCCTaGACTTCTCATAATCTTACAGTGGCTCTCCATTTTCCTTCATAC | + |
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Preference number: 1 (lower is better) Translates to: QVAILQKAWRPKLSS*TSHNLTVALHFPSY Trigger: GTATGAAGGAAAATGGAGAGCCACTGTAAGATTATGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| 3UTR CCA 90 bp | ACAGCAGCAAAACCTGTTGTACAGGTTGCCATCTTACAGAAAGCATaGAGACCCAAATTATCCTCCTGCACTTCTCATAATCTTACAGTG | + |
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Preference number: 1 (lower is better) Translates to: TAAKPVVQVAILQKA*RPKLSSCTSHNLTV Trigger: CACTGTAAGATTATGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACAACAGGTTTTGCTGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCAAAACCTGTTGTACAGGTTGCCATCTTACAGAAAGCATGGAGACCCAAATCATCAGACATTCCCATaGTTTAGAGTGCGAGAAATA | + |
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Preference number: 2 (lower is better) Translates to: QQNLLYRLPSYRKHGDPNHQTFP*FRVREI Trigger: TATTTCTCGCACTCTAAATCATGGGAATGTCTGATG...ATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACAACAGGTTTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| 3UTR CCA 72 bp | AAACCTGTTGTACAGGTTGCCATCTTACAGAAAGCATaGAGACCCAAATTATCCTCCTGCACTTCTCATAAT | + |
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Preference number: 3 (lower is better) Translates to: KPVVQVAILQKA*RPKLSSCTSHN Trigger: ATTATGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACAACAGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| 3UTR GCA 72 bp | ATCTTACAGAAAGCATGGAGACCCAAATTATCCTCCTaGACTTCTCATAATCTTACAGTGGCTCTCCATTTT | + |
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Preference number: 3 (lower is better) Translates to: ILQKAWRPKLSS*TSHNLTVALHF Trigger: AAAATGGAGAGCCACTGTAAGATTATGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTTCTGTAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | GGTTGCCATCTTACAGAAAGCATGGAGACCCAAATTATCCTCCTGCACTTCTCAGATCGCTCGTGTATGTaGAGGGATCTGGGGAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: GCHLTESMETQIILLHFSDRSCM*RDLGKV Trigger: CACTTTCCCCAGATCCCTTCACATACACGAGCGATC...TGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR CCA 90 bp | CAGCAAAACCTGTTGTACAGGTTGCCATCTTACAGAAAGCATGGAGACCCAAATAGGGCTTCTGTCTCATaGGAGGGCTCTTATGCATCC | + |
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Preference number: 4 (lower is better) Translates to: QQNLLYRLPSYRKHGDPNRASVS*EGSYAS Trigger: GGATGCATAAGAGCCCTCCCATGAGACAGAAGCCCT...ATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACAACAGGTTTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | GGTTGCCATCTTACAGAAAGCATGGAGACCCAAATTATCCTCCTGCACTTCTCAAGGCACTGGAATAGGTaGAAGCTTTTCCGCAATGCT | + |
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Preference number: 4 (lower is better) Translates to: GCHLTESMETQIILLHFSRHWNR*KLFRNA Trigger: AGCATTGCGGAAAAGCTTTCACCTATTCCAGTGCCT...TGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | AGCAAAACCTGTTGTACAGGTTGCCATCTTACAGAAAGCATGGAGACCCAAATTGGTATGTGGAACAGGTaGACGCTTTCCCACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: SKTCCTGCHLTESMETQIGMWNR*TLSHTA Trigger: AGCAGTGTGGGAAAGCGTTCACCTGTTCCACATACC...AATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACAACAGGTTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | CAGCAAAACCTGTTGTACAGGTTGCCATCTTACAGAAAGCATGGAGACCCAAATAGGTTCTGCGATCAATaGAGGCTTTCCCACAATGTG | + |
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Preference number: 4 (lower is better) Translates to: QQNLLYRLPSYRKHGDPNRFCDQ*RLSHNV Trigger: CACATTGTGGGAAAGCCTTCATTGATCGCAGAACCT...ATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACAACAGGTTTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | AAAGCATGGAGACCCAAATTATCCTCCTGCACTTCTCATAATCTTACAGTGGCTCGCAAAGAAGTTCCCTaGGTGAAGGATTTCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: KAWRPKLSSCTSHNLTVARKEVP*VKDFPH Trigger: GTGTGGGAAATCCTTCACTCAGGGAACTTCTTTGCG...AGCCACTGTAAGATTATGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | CAGCAAAACCTGTTGTACAGGTTGCCATCTTACAGAAAGCATGGAGACCCAAATGAGTTCGTTCATGTCTaGGAAGGTATGTGGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: QQNLLYRLPSYRKHGDPNEFVHV*EGMWNR Trigger: CCTGTTCCACATACCTTCTCAGACATGAACGAACTC...ATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACAACAGGTTTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR CCA 90 bp | ACCTGTTGTACAGGTTGCCATCTTACAGAAAGCATGGAGACCCAAATTATCCTCATCCTCAAAGGTCACTaGCTCCATTTCCTGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TCCTGCHLTESMETQIILILKGH*LHFLLL Trigger: CAGAAGCAGGAAATGGAGCCAGTGACCTTTGAGGAT...GAGGATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACAACAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | GGTTGCCATCTTACAGAAAGCATGGAGACCCAAATTATCCTCCTGCACTTCTCAGCAACTCAGAATAAGTaGAGTCCTTCCAACAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: GCHLTESMETQIILLHFSATQNK*SPSNSS Trigger: AGAACTGTTGGAAGGACTTCACTTATTCTGAGTTGC...TGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | AAAGCATGGAGACCCAAATTATCCTCCTGCACTTCTCATAATCTTACAGTGGCTAATCATCACGTTGGATaGAGGCTTTCCCACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: KAWRPKLSSCTSHNLTVANHHVG*RLSHTA Trigger: AGCAGTGTGGGAAAGCCTTCATCCAACGTGATGATT...AGCCACTGTAAGATTATGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | GGTTGCCATCTTACAGAAAGCATGGAGACCCAAATTATCCTCCTGCACTTCTCATTCTTGATACTGGCATaGTTTCTTTCCAGTTTGACC | + |
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Preference number: 4 (lower is better) Translates to: GCHLTESMETQIILLHFSFLILA*FLSSLT Trigger: GGTCAAACTGGAAAGAAATCATGCCAGTATCAAGAA...TGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | AAAGCATGGAGACCCAAATTATCCTCCTGCACTTCTCATAATCTTACAGTGGCTGGATTCTTTCATGGATaGGAAGTTGGCAGGAACGAA | + |
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Preference number: 4 (lower is better) Translates to: KAWRPKLSSCTSHNLTVAGFFHG*EVGRNE Trigger: TTCGTTCCTGCCAACTTCTCATCCATGAAAGAATCC...AGCCACTGTAAGATTATGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | AAAGCATGGAGACCCAAATTATCCTCCTGCACTTCTCATAATCTTACAGTGGCTAGCTTCTTCTCACTGTaGGTTCGTTCATGTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: KAWRPKLSSCTSHNLTVASFFSL*VRSCLR Trigger: TCTCAGACATGAACGAACTCACAGTGAGAAGAAGCT...AGCCACTGTAAGATTATGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR GCA 90 bp | AGCAAAACCTGTTGTACAGGTTGCCATCTTACAGAAAGCATGGAGACCCAAATTATGGGAGGGCTCTTATaGATCCAAAGCAACTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SKTCCTGCHLTESMETQIMGGLL*IQSNSE Trigger: TTCTGAGTTGCTTTGGATGCATAAGAGCCCTCCCAT...AATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACAACAGGTTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | AAAACCTGTTGTACAGGTTGCCATCTTACAGAAAGCATGGAGACCCAAATTATCTTCCAGTTTGACCTTTaGAGTGCATGTCTGAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: KTCCTGCHLTESMETQIIFQFDL*SACLRV Trigger: TACCCTCAGACATGCACTTCAAAGGTCAAACTGGAA...GATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACAACAGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | AAAGCATGGAGACCCAAATTATCCTCCTGCACTTCTCATAATCTTACAGTGGCTGATCGTTCATGTATGTaGAGGTACGCAGAACATTTG | + |
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Preference number: 4 (lower is better) Translates to: KAWRPKLSSCTSHNLTVADRSCM*RYAEHL Trigger: CAAATGTTCTGCGTACCTTCACATACATGAACGATC...AGCCACTGTAAGATTATGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | AACCCAGTAAACAGCACAGGCTTCGTTGAATATTGTAATTGCATAACTTTTACTGGGATCTGGGGAAAGTaGATAGTTTCCCACACTGCA | + |
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Preference number: 4 (lower is better) Translates to: NPVNSTGFVEYCNCITFTGIWGK*IVSHTA Trigger: TGCAGTGTGGGAAACTATTCACTTTCCCCAGATCCC...AGTAAAAGTTATGCAATTACAATATTCAACGAAGCCTGTGCTGTTTACTGGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR CCA 90 bp | GGTTGCCATCTTACAGAAAGCATGGAGACCCAAATTATCCTCCTGCACTTCTCATTTCCCTTAGGATTTTaGTACTCTTCTTCAGTATCT | + |
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Preference number: 4 (lower is better) Translates to: GCHLTESMETQIILLHFSFPLGF*YSSSVS Trigger: AGATACTGAAGAAGAGTACCAAAATCCTAAGGGAAA...TGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR CCA 90 bp | AAAACCTGTTGTACAGGTTGCCATCTTACAGAAAGCATGGAGACCCAAATTATCTCATGGATGAGAAGTTaGCAGGAACGAAGAAATGCT | + |
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Preference number: 4 (lower is better) Translates to: KTCCTGCHLTESMETQIISWMRS*QERRNA Trigger: AGCATTTCTTCGTTCCTGCCAACTTCTCATCCATGA...GATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACAACAGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | AACCCAGTAAACAGCACAGGCTTCGTTGAATATTGTAATTGCATAACTTTTACTGTCCTTTCATGGTTGTaGCAGGTTCTGCGATCAATG | + |
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Preference number: 4 (lower is better) Translates to: NPVNSTGFVEYCNCITFTVLSWL*QVLRSM Trigger: CATTGATCGCAGAACCTGTCACAACCATGAAAGGAC...AGTAAAAGTTATGCAATTACAATATTCAACGAAGCCTGTGCTGTTTACTGGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | AACCCAGTAAACAGCACAGGCTTCGTTGAATATTGTAATTGCATAACTTTTACTGGTACGCAGAACATTTaGATGCTTTCCCACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: NPVNSTGFVEYCNCITFTGTQNI*MLSHTA Trigger: AGCAGTGTGGGAAAGCATTCAAATGTTCTGCGTACC...AGTAAAAGTTATGCAATTACAATATTCAACGAAGCCTGTGCTGTTTACTGGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR TCA 90 bp | AAAACCTGTTGTACAGGTTGCCATCTTACAGAAAGCATGGAGACCCAAATTATCGAGATTTGGAAAAGGTaGATGTTTTCCCACATTGAA | + |
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Preference number: 4 (lower is better) Translates to: KTCCTGCHLTESMETQIIEIWKR*MFSHIE Trigger: TTCAATGTGGGAAAACATTCACCTTTTCCAAATCTC...GATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACAACAGGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR GCA 90 bp | ATCTTACAGAAAGCATGGAGACCCAAATTATCCTCCTGCACTTCTCATAATCTTACAGGAATCACTCCATaGTTTCCCACATTGTTTACA | + |
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Preference number: 4 (lower is better) Translates to: ILQKAWRPKLSSCTSHNLTGITP*FPTLFT Trigger: TGTAAACAATGTGGGAAAGCATGGAGTGATTCCTGT...AAGATTATGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTTCTGTAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR CCA 90 bp | AACCCAGTAAACAGCACAGGCTTCGTTGAATATTGTAATTGCATAACTTTTACTGTATGGATTCTTTCATaGATGAGAAGTTGGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: NPVNSTGFVEYCNCITFTVWILS*MRSWQE Trigger: TTCCTGCCAACTTCTCATCCATGAAAGAATCCATAC...AGTAAAAGTTATGCAATTACAATATTCAACGAAGCCTGTGCTGTTTACTGGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR CAA 90 bp | ACCTGTTGTACAGGTTGCCATCTTACAGAAAGCATGGAGACCCAAATTATCCTCGTAGCAATCATCACGTaGGATGAAGGCTTTCCCACA | + |
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Preference number: 5 (lower is better) Translates to: TCCTGCHLTESMETQIILVAIIT*DEGFPT Trigger: TGTGGGAAAGCCTTCATCCAACGTGATGATTGCTAC...GAGGATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACAACAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR CAA 90 bp | CAGCAAAACCTGTTGTACAGGTTGCCATCTTACAGAAAGCATGGAGACCCAAATGTTTCCCTTAGGATTTaGGTACTCTTCTTCAGTATC | + |
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Preference number: 5 (lower is better) Translates to: QQNLLYRLPSYRKHGDPNVSLRI*VLFFSI Trigger: GATACTGAAGAAGAGTACCAAAATCCTAAGGGAAAC...ATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACAACAGGTTTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR CAA 90 bp | AAAACCTGTTGTACAGGTTGCCATCTTACAGAAAGCATGGAGACCCAAATTATCTTCATGGATGAGAAGTaGGCAGGAACGAAGAAATGC | + |
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Preference number: 5 (lower is better) Translates to: KTCCTGCHLTESMETQIIFMDEK*AGTKKC Trigger: GCATTTCTTCGTTCCTGCCAACTTCTCATCCATGAA...GATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACAACAGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR CAA 90 bp | ATCTTACAGAAAGCATGGAGACCCAAATTATCCTCCTGCACTTCTCATAATCTTAGGTACGCAGAACATTaGAATGCTTTCCCACACTGC | + |
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Preference number: 5 (lower is better) Translates to: ILQKAWRPKLSSCTSHNLRYAEH*NAFPHC Trigger: GCAGTGTGGGAAAGCATTCAAATGTTCTGCGTACCT...AAGATTATGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTTCTGTAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR CAA 90 bp | GGTTGCCATCTTACAGAAAGCATGGAGACCCAAATTATCCTCCTGCACTTCTCAGAATGTTTTCCCACATaGAACACACATGAATGGTTT | + |
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Preference number: 5 (lower is better) Translates to: GCHLTESMETQIILLHFSECFPT*NTHEWF Trigger: AAACCATTCATGTGTGTTCAATGTGGGAAAACATTC...TGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS TCA 90 bp | CTGTATGTTCTTGATACTGGCATGATTTCTTTCCAGTTTGACCTTTaGAGTGCATGTCTGAGGGTAAATGAGTACAGATGTCTCTTTCAC | + |
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Preference number: 5 (lower is better) Translates to: LYVLDTGMISFQFDL*SACLRVNEYRCLFH Trigger: GTGAAAGAGACATCTGTACTCATTTACCCTCAGACATGCACTTCAAAGGTCAAACTGGAAAGAAATCATGCCAGTATCAAGAACATACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR CAA 90 bp | AACCCAGTAAACAGCACAGGCTTCGTTGAATATTGTAATTGCATAACTTTTACTATGCTCTGGACTCTGTaGGTGAGTTTCTCCATACTG | + |
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Preference number: 5 (lower is better) Translates to: NPVNSTGFVEYCNCITFTMLWTL*VSFSIL Trigger: CAGTATGGAGAAACTCACCAACAGAGTCCAGAGCAT...AGTAAAAGTTATGCAATTACAATATTCAACGAAGCCTGTGCTGTTTACTGGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS-3UTR CAA 90 bp | ATCTTACAGAAAGCATGGAGACCCAAATTATCCTCCTGCACTTCTCATAATCTTTCTGTAGAGCTTCTTTaGACTGGAATCCAACATAGT | + |
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Preference number: 5 (lower is better) Translates to: ILQKAWRPKLSSCTSHNLSVELL*TGIQHS Trigger: ACTATGTTGGATTCCAGTCAAAAGAAGCTCTACAGA...AAGATTATGAGAAGTGCAGGAGGATAATTTGGGTCTCCATGCTTTCTGTAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS CCA 72 bp | GGAGGCAGAGGTCGCTCTGTATGTTCAAAGCCAGCCTaGTCTGCAGACCAAATTCTAGGACAAAGCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: GGRGRSVCSKPA*SADQILGQSCT Trigger: TGTGCAGCTTTGTCCTAGAATTTGGTCTGCAGACCAGGCTGGCTTTGAACATACAGAGCGACCTCTGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234770.2 |
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| CDS CCA 72 bp | CAGTCCCTTGTTTATCTTCATAGGGCTTCTGTCTCATaGGAGGGCTCTTATGCATCCAAAGCAACTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: QSLVYLHRASVS*EGSYASKATQN Trigger: ATTCTGAGTTGCTTTGGATGCATAAGAGCCCTCCCATGAGACAGAAGCCCTATGAAGATAAACAAGGGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS TCA 72 bp | GAGGGCTCTTATGCATCCAAAGCAACTCAGAATAAGTaGAGTCCTTCCAACAGTTCTTATGTTTCAAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: EGSYASKATQNK*SPSNSSYVSKP Trigger: AGGCTTTGAAACATAAGAACTGTTGGAAGGACTTCACTTATTCTGAGTTGCTTTGGATGCATAAGAGCCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS TCA 72 bp | CTTGATACTGGCATGATTTCTTTCCAGTTTGACCTTTaGAGTGCATGTCTGAGGGTAAATGAGTACAGATGT | + |
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Preference number: 6 (lower is better) Translates to: LDTGMISFQFDL*SACLRVNEYRC Trigger: ACATCTGTACTCATTTACCCTCAGACATGCACTTCAAAGGTCAAACTGGAAAGAAATCATGCCAGTATCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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| CDS TCA 72 bp | TTTCAAAGCCTTCTCTGTATGTTCTTGATACTGGCATaGTTTCTTTCCAGTTTGACCTTTGAAGTGCATGTC | + |
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Preference number: 6 (lower is better) Translates to: FQSLLCMFLILA*FLSSLTFEVHV Trigger: GACATGCACTTCAAAGGTCAAACTGGAAAGAAATCATGCCAGTATCAAGAACATACAGAGAAGGCTTTGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039132.9 |
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