RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP462 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000060206

Ensembl transcript IDs: ENSMUST00000030131.12, ENSMUST00000079605.5, ENSMUST00000098070.10, ENSMUST00000133895.8

Found 865 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACAGAGCAGCTAGATGCGCAGACAAAGCACTTTTCCAGGCTCCCTaGAGGATGCGGCATCTCCTGTCCAAGCTCACGGAAGGGATGGCT +
Preference number: 1 (lower is better)
Translates to: NRAARCADKALFQAP*RMRHLLSKLTEGMA
Trigger: AGCCATCCCTTCCGTGAGCTTGGACAGGAGATGCCGCATCCTGCAGGGAGCCTGGAAAAGTGCTTTGTCTGCGCATCTAGCTGCTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
3UTR CCA 90 bp CTCCCTGCAGGATGCGGCATCTCCTGTCCAAGCTCACGGAAGGGATaGCTCCCCAAAGAAATGAGACAGCCTCACAATACACAAAGCAAA +
Preference number: 1 (lower is better)
Translates to: LPAGCGISCPSSRKG*LPKEMRQPHNTQSK
Trigger: TTTGCTTTGTGTATTGTGAGGCTGTCTCATTTCTTTGGGGAGCCATCCCTTCCGTGAGCTTGGACAGGAGATGCCGCATCCTGCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
3UTR CCA 90 bp CTTCACAAATGCGATATCTTTCCATGGATTTTCTCTGAAGCTGTGTaGGACACTGACACCTCAGTTTACCCTCTTTCCCTTCTGGCCCGC +
Preference number: 1 (lower is better)
Translates to: LHKCDIFPWIFSEAV*DTDTSVYPLSLLAR
Trigger: GCGGGCCAGAAGGGAAAGAGGGTAAACTGAGGTGTCAGTGTCCCACACAGCTTCAGAGAAAATCCATGGAAAGATATCGCATTTGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
3UTR-3UTR TCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCGAAGGAAGGATGTCGTaGCAGGAAAGGAGCCACATA +
Preference number: 2 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCEGRMS*QERSHI
Trigger: TATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTC...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
3UTR-3UTR TCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGAAGGAAGGATGTCGTaGCAGGAAAGGAGCCACATA +
Preference number: 2 (lower is better)
Translates to: LGEVFCVREPRFPHTVREEGRMS*QERSHI
Trigger: TATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
3UTR-3UTR CCA 90 bp TCACAGACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCACACTTCCCCCTGTTCTaGTTTCCACATGACGGCCCC +
Preference number: 2 (lower is better)
Translates to: SQTSSPGMKLFSTFEMRPHFPLF*FPHDGP
Trigger: GGGGCCGTCATGTGGAAACCAGAACAGGGGGAAGTG...TGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGTCTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
3UTR-3UTR GCA 90 bp AATACACAAAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATACGCACAGAAAGTTGTaGGCCCAAAAGTTGTTCCCC +
Preference number: 2 (lower is better)
Translates to: NTQSKQNRVHSTHEGQPNTHRKL*AQKLFP
Trigger: GGGGAACAACTTTTGGGCGCACAACTTTCTGTGCGT...ATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTTTGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
3UTR-3UTR GCA 90 bp TCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCGGCCACAAACAGAGCAGCTAGATaGGCAGACAAAGCACTTTTC +
Preference number: 2 (lower is better)
Translates to: SMSLQSTENRMRPKCAATNRAAR*ADKALF
Trigger: GAAAAGTGCTTTGTCTGCGCATCTAGCTGCTCTGTT...TGTGGCCGCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
3UTR-3UTR CCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAAAGCTCACGGAAGGGATaGCTCCCCAAAGAAATGAGA +
Preference number: 2 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKSSRKG*LPKEMR
Trigger: TCTCATTTCTTTGGGGAGCCATCCCTTCCGTGAGCT...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
3UTR-3UTR TCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAACCTCTAACTCTCCCTTaGCCTCAAATTAAACAAACA +
Preference number: 2 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKPLTLP*PQIKQT
Trigger: TGTTTGTTTAATTTGAGGTCAAGGGAGAGTTAGAGG...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
3UTR-3UTR TCA 90 bp TGTAAATTCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCACCTGGAATACAAGATaGCAATTCACACACAGTTAT +
Preference number: 2 (lower is better)
Translates to: CKFYVITVNRKQNASKMCTWNTR*QFTHSY
Trigger: ATAACTGTGTGTGAATTGTCATCTTGTATTCCAGGT...GCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGAATTTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
3UTR GCA 72 bp GCTAGATGCGCAGACAAAGCACTTTTCCAGGCTCCCTaGAGGATGCGGCATCTCCTGTCCAAGCTCACGGAA +
Preference number: 3 (lower is better)
Translates to: ARCADKALFQAP*RMRHLLSKLTE
Trigger: TTCCGTGAGCTTGGACAGGAGATGCCGCATCCTGCAGGGAGCCTGGAAAAGTGCTTTGTCTGCGCATCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
3UTR CCA 72 bp GGATGCGGCATCTCCTGTCCAAGCTCACGGAAGGGATaGCTCCCCAAAGAAATGAGACAGCCTCACAATACA +
Preference number: 3 (lower is better)
Translates to: GCGISCPSSRKG*LPKEMRQPHNT
Trigger: TGTATTGTGAGGCTGTCTCATTTCTTTGGGGAGCCATCCCTTCCGTGAGCTTGGACAGGAGATGCCGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
3UTR-3UTR CAA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCGTCCTAAAAGCAGCTTaGTTCTGTCTTCTTCTCTCC +
Preference number: 3 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVVLKAA*FCLLLS
Trigger: GGAGAGAAGAAGACAGAACAAAGCTGCTTTTAGGAC...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
3UTR-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGTCCTAAAAGCAGCTTaGTTCTGTCTTCTTCTCTCC +
Preference number: 3 (lower is better)
Translates to: LGEVFCVREPRFPHTVREVLKAA*FCLLLS
Trigger: GGAGAGAAGAAGACAGAACAAAGCTGCTTTTAGGAC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
3UTR-3UTR CAA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGTCCTAAAAGCAGCTTaGTTCTGTCTTCTTCTCTCC +
Preference number: 3 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSVLKAA*FCLLLS
Trigger: GGAGAGAAGAAGACAGAACAAAGCTGCTTTTAGGAC...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
3UTR TCA 72 bp AATCTCCGTGGTGAAGATCCGGAAGGAAGGATGTCGTaGCAGGAAAGGAGCCACATATTCCAACCATTTAAA +
Preference number: 3 (lower is better)
Translates to: NLRGEDPEGRMS*QERSHIFQPFK
Trigger: TTTAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTTCACCACGGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
3UTR CCA 72 bp TGCGATATCTTTCCATGGATTTTCTCTGAAGCTGTGTaGGACACTGACACCTCAGTTTACCCTCTTTCCCTT +
Preference number: 3 (lower is better)
Translates to: CDIFPWIFSEAV*DTDTSVYPLSL
Trigger: AAGGGAAAGAGGGTAAACTGAGGTGTCAGTGTCCCACACAGCTTCAGAGAAAATCCATGGAAAGATATCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCCCCGGCCCACCAGTGTaGCACTGGCGTCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCPGPPV*HWRLWL
Trigger: CAGCCAGAGACGCCAGTGGCACACTGGTGGGCCGGG...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR TCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCCTGCGGCAGTGGCTGTaGTGGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCLRQWL*WWWWWW
Trigger: CCACCACCACCACCACCATCACAGCCACTGCCGCAG...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCAAGAGTGGGAGAGGATaGGTCTGGCCCAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCKSGRG*VWPSPE
Trigger: CTCTGGGCTGGGCCAGACCCATCCTCTCCCACTCTT...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCCTCTGCAGACAGTCCTaGCGCCTGGTGATCCAGAAC +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCLCRQS*RLVIQN
Trigger: GTTCTGGATCACCAGGCGTCAGGACTGTCTGCAGAG...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTCCTTGCGGATGGGGTTaGTGTAGGCACACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGPCGWG*CRHTGH
Trigger: GTGCCCTGTGTGCCTACACCAACCCCATCCGCAAGG...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCTCTTCCCGTAATGGGTaGGGAGGCCGTGCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCSSRNG*GGRASC
Trigger: ACAACTTGCACGGCCTCCTCACCCATTACGGGAAGA...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTGTTGGGCTTGTCACTaGTGGTCCTGGAGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGCWACH*WSWRPQ
Trigger: TTGCGGCCTCCAGGACCATCAGTGACAAGCCCAACA...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTAGCCACTCGATGTCTTaGGCTTCGCCTTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGSHSMS*ASPSTS
Trigger: CGAGGTGGAAGGCGAAGCTCAAGACATCGAGTGGCT...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCGGTTTGTGGTGTCCGTaGTGGGTCTGCATATGGCGA +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCGLWCP*WVCIWR
Trigger: TCGCCATATGCAGACCCATCACGGACACCACAAACC...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTCCAGATCTGTTGGGCTaGAAAGGCAGTGGGCACCTC +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGPDLLG*KGSGHL
Trigger: GAGGTGCCCACTGCCTTTTCAGCCCAACAGATCTGG...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCAAGCACCCCCACAACTaGCCGATTGCTGTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCKHPHN*PIAVGA
Trigger: TGCTCCTACAGCAATCGGTCAGTTGTGGGGGTGCTT...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCCTCTGGGGAAAGTCTTaGATCCTCTGGGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCLWGKS*ILWALS
Trigger: GCTGAGTGCCCAGAGGATGCAAGACTTTCCCCAGAG...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCGTGAAGAACGGCTTCTaGCTTCTGTTCCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCVKNGF*LLFRAS
Trigger: GCTGGCACGGAACAGAAGGCAGAAGCCGTTCTTCAC...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGGGCCGAGGGGAATCTTaGAGCCCTTCAGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEGRGES*SPSAPL
Trigger: GAGAGGGGCTGAAGGGCTCCAAGATTCCCCTCGGCC...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCGCAGGAGCAAACCACTaGGCTCCATGTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCAGANH*APCGSR
Trigger: TCTACTCCCACATGGAGCCCAGTGGTTTGCTCCTGC...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCCACCGGAACACAGTGTaGGAGACCAGATGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCHRNTV*ETRCEV
Trigger: TACCTCGCATCTGGTCTCCCACACTGTGTTCCGGTG...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGGAGACTGACAATCCGTaGCCGGGGAAGGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEETDNP*PGKGQG
Trigger: GCCCTGACCCTTCCCCGGCCACGGATTGTCAGTCTC...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTGGTTTGTGGTGTCCGTaGTGGGTCTGCATATGGCGA +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGGLWCP*WVCIWR
Trigger: TCGCCATATGCAGACCCATCACGGACACCACAAACC...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCCACCAGCATGGGCTTTaGGGATGTGTGTCTTCAACC +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCHQHGL*GCVSST
Trigger: GGTTGAAGACACACATCCTCAAAGCCCATGCTGGTG...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCTTCATCTGTTCCAGCTaGTCCAAGTTCACCCGGCCA +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCFICSS*SKFTRP
Trigger: TGGCCGGGTGAACTTGGATCAGCTGGAACAGATGAA...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGCTGCCGGCAGTTCCTTaGAGGGGTCCTGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTELPAVP*RGPAVT
Trigger: TGTCACTGCAGGACCCCTGCAAGGAACTGCCGGCAG...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGGGCTGTGGTGGCTGCTaGTGCTGTAAGGGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEGCGGC*CCKGSN
Trigger: GTTGGACCCCTTACAGCAGCAGCAGCCACCACAGCC...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCGGCCGAGGGGAATCTTaGAGCCCTTCAGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVGRGES*SPSAPL
Trigger: GAGAGGGGCTGAAGGGCTCCAAGATTCCCCTCGGCC...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTGCAGGAGCAAACCACTaGGCTCCATGTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGAGANH*APCGSR
Trigger: TCTACTCCCACATGGAGCCCAGTGGTTTGCTCCTGC...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGAAGAGTGGGAGAGGATaGGTCTGGCCCAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEKSGRG*VWPSPE
Trigger: CTCTGGGCTGGGCCAGACCCATCCTCTCCCACTCTT...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGGCATGCTGCTTCTTTaGGAACACCCCCGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTGMLLL*EHPRVA
Trigger: CGCCACCCGGGGGTGTTCCCAAAGAAGCAGCATGCC...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTGATGGCCCGAAGCGTTaGATGCACTTCCACGCAGAA +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGDGPKR*MHFHAE
Trigger: TTCTGCGTGGAAGTGCATCCAACGCTTCGGGCCATC...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTTCCACTTCTTCGGCTaGAGTGGCCTTCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGFHFFG*SGLLGG
Trigger: TCCTCCCAGAAGGCCACTCCAGCCGAAGAAGTGGAA...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGTGGAGCAGGGGCAGGTaGTGGCGCTGTGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTWSRGR*WRCGLL
Trigger: AAGGAGTCCACAGCGCCACCACCTGCCCCTGCTCCA...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCTGGAACCAGAGGGTCTaGCAGTGGAGCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVWNQRV*QWSRGR
Trigger: CCTGCCCCTGCTCCACTGCCAGACCCTCTGGTTCCA...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGCGCGAGCCACAGGCGTaGACGTCGCCATGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREREPQA*TSPCSW
Trigger: CCAAGAGCATGGCGACGTCCACGCCTGTGGCTCGCG...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGAGGTGGCTCCTCTCATaGGAACGCAGCCCCTGCATG +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTRWLLS*ERSPCM
Trigger: CATGCAGGGGCTGCGTTCTCATGAGAGGAGCCACCT...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR TCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGGTGGCTCCTCTCATaGGAACGCAGCCCCTGCATG +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVRWLLS*ERSPCM
Trigger: CATGCAGGGGCTGCGTTCTCATGAGAGGAGCCACCT...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR TCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGTGAGGAGAGGAGACTaGCAATCCGTGGCCGGGGAA +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTVRRGD*QSVAGE
Trigger: TTCCCCGGCCACGGATTGTCAGTCTCCTCTCCTCAC...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTCGTCACTGGAGCAGGTaGAGGTACACTTATCACAGC +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGRHWSR*RYTYHS
Trigger: GCTGTGATAAGTGTACCTTCACCTGCTCCAGTGACG...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTGGACTCTCTTCAGCTTaGGCTCCATGGACCTTCCTA +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGGLSSA*APWTFL
Trigger: TAGGAAGGTCCATGGAGCTCAAGCTGAAGAGAGTCC...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCTTCTGGTAGTGGGCTaGCAGTCCCTTGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVLLVVG*QSLADG
Trigger: CCCATCCGCAAGGGACTGGCAGCCCACTACCAGAAG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTAACTTGCTGGCATGCTaGTTCTTTGGGAACACCCCC +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGNLLAC*FFGNTP
Trigger: GGGGGTGTTCCCAAAGAAGCAGCATGCCAGCAAGTT...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTCCCAACTTGCTGGCATaGTGCTTCTTTGGGAACACC +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGPNLLA*CFFGNT
Trigger: GGTGTTCCCAAAGAAGCAGCATGCCAGCAAGTTGGG...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTCGGCCCTCTCAAAGCTaGTTCTCTCCTCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGRPSQS*FSPLLP
Trigger: TGGAAGAAGAGGAGAGAAGCAGCTTTGAGAGGGCCG...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCGAAATGCTACGGCGGTaGATGGTGAGGAAAGGACAA +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCEMLRR*MVRKGQ
Trigger: TTGTCCTTTCCTCACCATGCACCGCCGTAGCATTTC...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGGCCGAGGGGAATCTTaGAGCCCTTCAGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSGRGES*SPSAPL
Trigger: GAGAGGGGCTGAAGGGCTCCAAGATTCCCCTCGGCC...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGCAGCTGGCAGGCTTCTaGTTCCGGTCACAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEQLAGF*FRSQRL
Trigger: AAGCCTCTGTGACCGGAACCAGAAGCCTGCCAGCTG...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGGGAGAGGATGGGTCTaGCCCAGCCCAGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTGRGWV*PSPEFG
Trigger: ACCAAACTCTGGGCTGGGCCAGACCCATCCTCTCCC...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTGGGTCAGGACGCCATaGATGCGAGTGTTGATGTAC +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGWVRTP*MRVLMY
Trigger: GTACATCAACACTCGCATCCATGGCGTCCTGACCCA...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTAAGTACTTGCAGAGCTaGCACCGGAACACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGKYLQS*HRNTVW
Trigger: CCACACTGTGTTCCGGTGCCAGCTCTGCAAGTACTT...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGCCTTGCGGATGGGGTTaGTGTAGGCACACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTPCGWG*CRHTGH
Trigger: GTGCCCTGTGTGCCTACACCAACCCCATCCGCAAGG...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGGCATGCTGCTTCTTTaGGAACACCCCCGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSGMLLL*EHPRVA
Trigger: CGCCACCCGGGGGTGTTCCCAAAGAAGCAGCATGCC...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCATGGAAGGTGGAGTTCTaGAAGCGGGGGCCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSWKVEF*KRGPLP
Trigger: AGGCAGCGGCCCCCGCTTCCAGAACTCCACCTTCCA...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGGCTTACACTGGAAGGTaGAGTTCTGGAAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEAYTGR*SSGSGG
Trigger: GCCCCCGCTTCCAGAACTCCACCTTCCAGTGTAAGC...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCGACAGCGGAGATCTTTaGGGCCTTCCTCCGGGACCG +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVDSGDL*GLPPGP
Trigger: CGGTCCCGGAGGAAGGCCCCAAAGATCTCCGCTGTC...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCCGGTGCAGCACTATGTaGTCGATCATGTTGCGTTTG +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCRCSTM*SIMLRL
Trigger: CAAACGCAACATGATCGACCACATAGTGCTGCACCG...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCGTAAGGGTGCAAAGGTaGGGCCTGTGTGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVVRVQR*GLCGWL
Trigger: CAGCCACCCACACAGGCCCCACCTTTGCACCCTTAC...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACTCAATACTGAGGTCTaGTGGCGGGGGCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSLNTEV*WRGLWG
Trigger: CCCCCACAGCCCCCGCCACCAGACCTCAGTATTGAG...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTCTTGGTAATGGTTTGTaGTGTCCCAGATGGAGACGG +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGLGNGL*CPRWRR
Trigger: CCGTCTCCATCTGGGACATCACAAACCATTACCAAG...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTCCTCAGCGGTCACCTTaGTGGCCGGGTGTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFPQRSP*WPGVAS
Trigger: AGAAGCGACACCCGGCCATCAAGGTGACCGCTGAGG...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGTGGGTGGGGATGGGATaGTCACCTTGTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEWVGMG*SPCWAC
Trigger: ACAAGCCCAACAAGGTGATCATCCCATCCCCACCCA...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGTGAGGAGAGGAGACTaGCAATCCGTGGCCGGGGAA +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSVRRGD*QSVAGE
Trigger: TTCCCCGGCCACGGATTGTCAGTCTCCTCTCCTCAC...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGTCTTGCCAGGGCGGCTaGCTGGTAGTGATTCAGCTG +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTSCQGG*LVVIQL
Trigger: CAGCTGAATCACTACCAGTCAGCCGCCCTGGCAAGA...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGCCCGGTAATGGCGCCTaGTGCTCTGGATGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREPGNGA*CSGCSQ
Trigger: CTGGCTACATCCAGAGCATCAGGCGCCATTACCGGG...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCTCCCTGCAAGTATTTTaGCAGTTTGGAACGGCACAC +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCSLQVF*QFGTAH
Trigger: GTGTGCCGTTCCAAACTGTCAAAATACTTGCAGGGA...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACCACTCAGAGCCCTGTaGGAACGCCCGTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSPLRAL*ERPSTE
Trigger: TTCTGTGGACGGGCGTTCTCACAGGGCTCTGAGTGG...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTGCCAGAATTATGAGGTaGCTTCGGCTTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGARIMR*LRLHLR
Trigger: CCTCAGATGAAGCCGAAGTCACCTCATAATTCTGGC...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCGTCCAGGTCAGCAGATaGATTCGTCATGTCAGACAT +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCVQVSR*IRHVRH
Trigger: ATGTCTGACATGACGAATTCATCTGCTGACCTGGAC...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGTGCCATCAGAGCCCATaGGCTGCTCTGCAGACAGTC +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTCHQSP*AALQTV
Trigger: GACTGTCTGCAGAGCAGCTCATGGGCTCTGATGGCA...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCGTCTTCAGAAAGCGTaGGCTCGATCTCCGCCCCAT +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVRLQKA*ARSPPH
Trigger: ATGGGGCGGAGATCGAGCTCACGCTTTCTGAAGACG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTGTACGGACAATGCCTaGATTTGTAGACGGCACCTG +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGCTDNA*ICRRHL
Trigger: CAGGTGCCGTCTACAAATGCAGGCATTGTCCGTACA...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCTTCTGGTAGTGGGCTaGCAGTCCCTTGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVLLVVG*QSLADG
Trigger: CCCATCCGCAAGGGACTGGCAGCCCACTACCAGAAG...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCTGCCTTCTGTTCCGTaGCAGCAGCAGTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVLPSVP*QQQSQK
Trigger: CTTCTGGGACTGCTGCTGGCACGGAACAGAAGGCAG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCGGTAGGCTCGAGGGCTaGCCCTCGAATTTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVGRLEG*PSNFGK
Trigger: CTTGCCAAAATTCGAGGGGCAGCCCTCGAGCCTACC...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCGGGTCTTCAGCCTCCTaGTTCACAGCAGCCGACACA +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVGSSAS*FTAADT
Trigger: TGTGTCGGCTGCTGTGAAGCAGGAGGCTGAAGACCC...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079605.5
CDS-3UTR CCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCAGCTGGCAGGCTTCTaGTTCCGGTCACAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVQLAGF*FRSQRL
Trigger: AAGCCTCTGTGACCGGAACCAGAAGCCTGCCAGCTG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGGGAGAGGATGGGTCTaGCCCAGCCCAGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSGRGWV*PSPEFG
Trigger: ACCAAACTCTGGGCTGGGCCAGACCCATCCTCTCCC...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCCACTGTACACTGGTATaGGGTGGAAGATATAGCAGG +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCHCTLV*GGRYSR
Trigger: CCTGCTATATCTTCCACCCCATACCAGTGTACAGTG...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCATCCGTCACGGAGACCTaGGAGGGGCTCACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSSVTET*EGLTSV
Trigger: CACTGAAGTGAGCCCCTCCCAGGTCTCCGTGACGGA...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGCACCGGAACACAGTGTaGGAGACCAGATGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEHRNTV*ETRCEV
Trigger: TACCTCGCATCTGGTCTCCCACACTGTGTTCCGGTG...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCCAGTCCCTTGCGGATaGGGTTGGTGTAGGCACACA +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVPVPCG*GWCRHT
Trigger: TGTGTGCCTACACCAACCCCATCCGCAAGGGACTGG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCCTCTTCTTCCATCAGTaGGGGTTTCTCGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCLFFHQ*GFLVFI
Trigger: GATGAACACGAGAAACCCCCACTGATGGAAGAAGAG...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTTGGAAGGTGGAGTTCTaGAAGCGGGGGCCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFWKVEF*KRGPLP
Trigger: AGGCAGCGGCCCCCGCTTCCAGAACTCCACCTTCCA...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCGCTTACACTGGAAGGTaGAGTTCTGGAAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVAYTGR*SSGSGG
Trigger: GCCCCCGCTTCCAGAACTCCACCTTCCAGTGTAAGC...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGCCATCCAGGAACAGGTaGGAAGGGTCTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTPSRNR*EGSSAS
Trigger: GGAGGCTGAAGACCCTTCCCACCTGTTCCTGGATGG...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR CCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCAACGCAGCCCCTGCATaGACATCAGGACCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVNAAPA*TSGPGH
Trigger: GTGACCGGGTCCTGATGTCCATGCAGGGGCTGCGTT...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR CCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAAACGCAGCCCCTGCATaGACATCAGGACCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSNAAPA*TSGPGH
Trigger: GTGACCGGGTCCTGATGTCCATGCAGGGGCTGCGTT...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR CCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGCTTCTTCGGCTGGAGTaGCCTTCTGGGAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVRELLRLE*PSGRRG
Trigger: ACCCCTCCTCCCAGAAGGCCACTCCAGCCGAAGAAG...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCTTCTTCGGCTGGAGTaGCCTTCTGGGAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVLLRLE*PSGRRG
Trigger: ACCCCTCCTCCCAGAAGGCCACTCCAGCCGAAGAAG...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACTTCTTCGGCTGGAGTaGCCTTCTGGGAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSLLRLE*PSGRRG
Trigger: ACCCCTCCTCCCAGAAGGCCACTCCAGCCGAAGAAG...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTGACAGCGGAGATCTTTaGGGCCTTCCTCCGGGACCG +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFDSGDL*GLPPGP
Trigger: CGGTCCCGGAGGAAGGCCCCAAAGATCTCCGCTGTC...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGATCTCCCGCAGGGTCTaGGACTCAGCATTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTISRRV*DSAFSP
Trigger: AGGGCTGAATGCTGAGTCCCAGACCCTGCGGGAGAT...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGCATCGGCATTGGCCTTaGAGTCCCGGTGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTHRHWP*SPGASS
Trigger: AGAAGAAGCACCGGGACTTCAAGGCCAATGCCGATG...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTCAGGGTGGTCTTTCTTaGTATGCTTCCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGQGGLS*YASSVH
Trigger: ATGCACTGAGGAAGCATATCAAGAAAGACCACCCTG...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGAGTTCCTCGCTCAGCTaGGGAGAGTCATCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTESSSLS*GESSLG
Trigger: ACCCAAAGATGACTCTCCTCAGCTGAGCGAGGAACT...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGAGCCACTCGATGTCTTaGGCTTCGCCTTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVRESHSMS*ASPSTS
Trigger: CGAGGTGGAAGGCGAAGCTCAAGACATCGAGTGGCT...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTGTTGTAGGAGGACTTaGAAGAGCAGAGTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGCCRRT*KSRVCS
Trigger: GCTGCAAACTCTGCTCTTTCAAGTCCTCCTACAACA...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTCCCGGTAATGGCGCCTaGTGCTCTGGATGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFPGNGA*CSGCSQ
Trigger: CTGGCTACATCCAGAGCATCAGGCGCCATTACCGGG...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCATGCTCATCCCGAAGGTaGGTGTCCAGTTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSCSSRR*VSSSSV
Trigger: CACGGAGGAACTGGACACTCACCTTCGGGATGAGCA...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGTCAGAACTGTTCAGCTaGAAGGGAGCAGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTSELFS*KGAGGR
Trigger: TCGGCCTCCTGCTCCCTTGCAGCTGAACAGTTCTGA...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGAACTTGCTGGCATGCTaGTTCTTTGGGAACACCCCC +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTENLLAC*FFGNTP
Trigger: GGGGGTGTTCCCAAAGAAGCAGCATGCCAGCAAGTT...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGTGGGTCAGGACGCCATaGATGCGAGTGTTGATGTAC +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEWVRTP*MRVLMY
Trigger: GTACATCAACACTCGCATCCATGGCGTCCTGACCCA...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCCAGTCCCTTGCGGATaGGGTTGGTGTAGGCACACA +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVPVPCG*GWCRHT
Trigger: TGTGTGCCTACACCAACCCCATCCGCAAGGGACTGG...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTAGAGTCATCTTTGGGTaGGGATGGGATGATCACCTT +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGRVIFG*GWDDHL
Trigger: AAGGTGATCATCCCATCCCCACCCAAAGATGACTCT...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCGCTTACACTGGAAGGTaGAGTTCTGGAAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVAYTGR*SSGSGG
Trigger: GCCCCCGCTTCCAGAACTCCACCTTCCAGTGTAAGC...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGATGGCCCGAAGCGTTaGATGCACTTCCACGCAGAA +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTDGPKR*MHFHAE
Trigger: TTCTGCGTGGAAGTGCATCCAACGCTTCGGGCCATC...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGGACAGGAGGTCCTGTaGGACTCTCTTCAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTGQEVL*DSLQLE
Trigger: CTCAAGCTGAAGAGAGTCCCACAGGACCTCCTGTCC...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCTCATGGACAGGTAGGTaGAGTTGGAGGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVSWTGR*SWRWGW
Trigger: CCAGCCCCACCTCCAACTCCACCTACCTGTCCATGA...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCGAAATGGAATCCCCTTaGTCTCTAACAGCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCEMESP*SLTACC
Trigger: GCAACAAGCTGTTAGAGACCAAGGGGATTCCATTTC...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTATGCGCATGGTTTTCTaGATCCTAAAGTACGAGGCC +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGMRMVF*ILKYEA
Trigger: GGCCTCGTACTTTAGGATCCAGAAAACCATGCGCAT...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTTAGCTGAAGCCAGATaGATGCTTTTCTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGLAEAR*MLFSGE
Trigger: TTCCCCAGAGAAAAGCATTCATCTGGCTTCAGCTAA...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGACGGCACCTGGGTTaGTGTCAATATCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVRRHLG*CQYPGQ
Trigger: TTGCCCAGGATATTGACATCAACCCAGGTGCCGTCT...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGTGGGTGGGGATGGGATaGTCACCTTGTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREWVGMG*SPCWAC
Trigger: ACAAGCCCAACAAGGTGATCATCCCATCCCCACCCA...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTCAATGCCTTTCTTGCTaGAGGACTGGAAGGAACATA +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGQCLSC*RTGRNI
Trigger: TATGTTCCTTCCAGTCCTTCAGCAAGAAAGGCATTG...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGCACCAGCATGGGCTTTaGGGATGTGTGTCTTCAACC +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTHQHGL*GCVSST
Trigger: GGTTGAAGACACACATCCTCAAAGCCCATGCTGGTG...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGAGGGGTGAGCATGTaGGGAGAGGAGACTGACAAT +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREGGVSM*GEETDN
Trigger: ATTGTCAGTCTCCTCTCCTCACATGCTCACCCCTCC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGCCGACTTTCTACCATTaGTGCTGGAGCTCTCGTAAG +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEPTFYH*CWSSRK
Trigger: CTTACGAGAGCTCCAGCATCAATGGTAGAAAGTCGG...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCTCTGGGGAAAGTCTTaGATCCTCTGGGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVLWGKS*ILWALS
Trigger: GCTGAGTGCCCAGAGGATGCAAGACTTTCCCCAGAG...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGCCCAACTTGCTGGCATaGTGCTTCTTTGGGAACACC +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTPNLLA*CFFGNT
Trigger: GGTGTTCCCAAAGAAGCAGCATGCCAGCAAGTTGGG...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTAGCTCGGCTATGCTTTaGAATTTGCTATCACAGTGC +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGSSAML*NLLSQC
Trigger: GCACTGTGATAGCAAATTGCAAAGCATAGCCGAGCT...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACTGGCGTCTCTGGCTaGTTCCAATCCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVTGVSG*FQSIQE
Trigger: TTCCTGGATGGATTGGAAGCAGCCAGAGACGCCAGT...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR GCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGTGAAGAACGGCTTCTaGCTTCTGTTCCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREVKNGF*LLFRAS
Trigger: GCTGGCACGGAACAGAAGGCAGAAGCCGTTCTTCAC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCTGCCCAGCTTCCACGTaGATAGTAAAAGCAGATTTA +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCCPAST*IVKADL
Trigger: TAAATCTGCTTTTACTATGCACGTGGAAGCTGGGCA...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTACTTGGTTGGTATCATaGAATGACATGCCGTGTCTC +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGTWLVS*NDMPCL
Trigger: GAGACACGGCATGTCATTGCATGATACCAACCAAGT...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGCAGGAGCAAACCACTaGGCTCCATGTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSAGANH*APCGSR
Trigger: TCTACTCCCACATGGAGCCCAGTGGTTTGCTCCTGC...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACTCATCACCATTCATaGCCCAGGGGTGGAACGCTT +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVTHHHS*PRGGTL
Trigger: AAGCGTTCCACCCCTGGGCCATGAATGGTGATGAGT...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCTTGATGTCAATATCCTaGGCAAAATCAGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCLMSIS*AKSAAF
Trigger: GAAGGCTGCTGATTTTGCCCAGGATATTGACATCAA...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGTTTTTGCCCTCGGGCTaGGCACGGACATTATTGTGC +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTFLPSG*ARTLLC
Trigger: GCACAATAATGTCCGTGCCCAGCCCGAGGGCAAAAA...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTCCAGTCCCTTGCGGATaGGGTTGGTGTAGGCACACA +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFPVPCG*GWCRHT
Trigger: TGTGTGCCTACACCAACCCCATCCGCAAGGGACTGG...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCATGTTTCCTCCTCTCCTaGCGTTTGGCACGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSCFLLS*RLARFW
Trigger: CCAGAAGCGTGCCAAACGCCAGGAGAGGAGGAAACA...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCGATGGCCCGAAGCGTTaGATGCACTTCCACGCAGAA +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVDGPKR*MHFHAE
Trigger: TTCTGCGTGGAAGTGCATCCAACGCTTCGGGCCATC...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGTGCCACTGGCGTCTCTaGCTGCTTCCAATCCATCCA +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVRECHWRL*LLPIHP
Trigger: TGGATGGATTGGAAGCAGCCAGAGACGCCAGTGGCA...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR CCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTACAAAGGAGCAATACTaGCAGCTGTACTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGTKEQY*QLYLSS
Trigger: AGAGGACAAGTACAGCTGCCAGTATTGCTCCTTTGT...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTAGTAAGAGGAGTCATTaGAGTCTTCCACTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGSKRSH*SLPLLR
Trigger: CCGAAGAAGTGGAAGACTCCAATGACTCCTCTTACT...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTACATTCATGGCCTCTaGGTGGTGTTCACCATAATG +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGYIHGL*VVFTIM
Trigger: CATTATGGTGAACACCACCCAGAGGCCATGAATGTA...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGAGACGGCACCTGGGTTaGTGTCAATATCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVRERRHLG*CQYPGQ
Trigger: TTGCCCAGGATATTGACATCAACCCAGGTGCCGTCT...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGTGGATGTTCAAGTGTaGGGTCAGCTCGGCTATGCT +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSVDVQV*GQLGYA
Trigger: AGCATAGCCGAGCTGACCTCACACTTGAACATCCAC...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGGCACCTCTTCTAAGTaGCCAAAAGGCCTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTGTSSK*PKGLSC
Trigger: ACAAGAGAGGCCTTTTGGTCACTTAGAAGAGGTGCC...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTGGAGGGGTGAGCATGTaGGGAGAGGAGACTGACAAT +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFGGVSM*GEETDN
Trigger: ATTGTCAGTCTCCTCTCCTCACATGCTCACCCCTCC...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGCGTCACTGGAGCAGGTaGAGGTACACTTATCACAGC +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVRERHWSR*RYTYHS
Trigger: GCTGTGATAAGTGTACCTTCACCTGCTCCAGTGACG...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTTACGGCGGTGCATGGTaGGGAAAGGACAAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFYGGAW*GKDKRD
Trigger: GTCCCTTTTGTCCTTTCCTCACCATGCACCGCCGTA...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCATGCTCTTGGGAGCTaGATTCAAAATCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVHALGS*IQNLPQ
Trigger: CTGCGGGAGATTTTGAATTCAGCTCCCAAGAGCATG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTTCAGAACTGTTCAGCTaGAAGGGAGCAGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFSELFS*KGAGGR
Trigger: TCGGCCTCCTGCTCCCTTGCAGCTGAACAGTTCTGA...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTCAAAAACGCAGTCCCTaGATCTGTATGTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGQKRSP*ICMFWL
Trigger: AAGCCAAAACATACAGATGCAGGGACTGCGTTTTTG...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGGCAGTGGGTGTAATATaGATCAATGTCGTGGCGCTT +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEAVGVI*INVVAL
Trigger: AAGCGCCACGACATTGATGCATATTACACCCACTGC...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGCCCTCTCAAAGCTaGTTCTCTCCTCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSRPSQS*FSPLLP
Trigger: TGGAAGAAGAGGAGAGAAGCAGCTTTGAGAGGGCCG...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGTGTCCTCAGCCTTGCTaGTCATTTCGTCGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTCPQPC*SFRRPC
Trigger: ACAAGGACGACGAAATGAGCAGCAAGGCTGAGGACA...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCTCTGTCCTCAGCCTTaGTGCTCATTTCGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVLCPQP*CSFRRP
Trigger: AGGACGACGAAATGAGCAGCAAGGCTGAGGACAGAG...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAACTCATCACCATTCATaGCCCAGGGGTGGAACGCTT +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSTHHHS*PRGGTL
Trigger: AAGCGTTCCACCCCTGGGCCATGAATGGTGATGAGT...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGCGTTTGGCACGCTTCTaGAATTCCTCATTGTGGATG +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTERLARF*NSSLWM
Trigger: CATCCACAATGAGGAATTCCAGAAGCGTGCCAAACG...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCATCCTCTCCTGGCGTTTaGCACGCTTCTGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSSSPGV*HASGIP
Trigger: AGGAATTCCAGAAGCGTGCCAAACGCCAGGAGAGGA...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGAACGGCACACTTCAATaGGGACAACTCGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTNGTLQ*GQLALL
Trigger: GAGAAGAGCGAGTTGTCCCCATTGAAGTGTGCCGTT...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCAGTATTTTGACAGTTTaGAACGGCACACTTCAATGG +
Preference number: 4 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCSILTV*NGTLQW
Trigger: CCATTGAAGTGTGCCGTTCCAAACTGTCAAAATACT...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTCAGCCACTACACAGATaGTTACTGTTTCGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGQPLHR*LLFRSL
Trigger: TAAAGAGCGAAACAGTAACCATCTGTGTAGTGGCTG...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTTGCGAGGTAGAGAAGTaGGCAGTGGACATAGGATCC +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFCEVEK*AVDIGS
Trigger: GGATCCTATGTCCACTGCTCACTTCTCTACCTCGCA...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGCACACAGGGCACACTTaGAGAGATTGTTTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTHTGHT*RDCFCP
Trigger: AGGGCAAAAACAATCTCTTCAAGTGTGCCCTGTGTG...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTGTGGATGTTCAAGTGTaGGGTCAGCTCGGCTATGCT +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFVDVQV*GQLGYA
Trigger: AGCATAGCCGAGCTGACCTCACACTTGAACATCCAC...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCTCACAGAATTCGCAGTaGAGAACGGCTTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVSQNSQ*RTASAF
Trigger: GAAGGCAGAAGCCGTTCTTCACTGCGAATTCTGTGA...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCATCACAGAATTCGCAGTaGAGAACGGCTTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSSQNSQ*RTASAF
Trigger: GAAGGCAGAAGCCGTTCTTCACTGCGAATTCTGTGA...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCTCCCTGCAAGTATTTTaGCAGTTTGGAACGGCACAC +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVSLQVF*QFGTAH
Trigger: GTGTGCCGTTCCAAACTGTCAAAATACTTGCAGGGA...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTCCTGGATGTGTGCCTTaGGATCTTCGTAAGATGGGG +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFPGCVP*DLRKMG
Trigger: CCCCATCTTACGAAGATCTCAAGGCACACATCCAGG...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGCCGCATTGGACACTTaGTCTTTCATGCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTAALDT*SFMLAE
Trigger: TTCAGCAAGCATGAAAGATCAAGTGTCCAATGCGGC...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGAGGTATACGAGCACTaGCTACATTTGAGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREEVYEH*LHLSAR
Trigger: TCGAGCGCTCAAATGTAGGCAGTGCTCGTATACCTC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGTGGAACAGAAGTACTTaGAGAGCTGGCACCGGAACA +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREWNRST*RAGTGT
Trigger: TGTTCCGGTGCCAGCTCTGCAAGTACTTCTGTTCCA...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCCCTCTTTAAGTCCCTaGTGTGGTGGTCTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVPSLSP*CGGLCN
Trigger: ATTACACAGACCACCACAGCAGGGACTTAAAGAGGG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGTTCATCCTCCAACATTaGATCAAGCAAGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEFILQH*IKQAVS
Trigger: GGACACTGCTTGCTTGATGCAATGTTGGAGGATGAA...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR GCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTCTCTGTCCTCAGCCTTaGTGCTCATTTCGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFLCPQP*CSFRRP
Trigger: AGGACGACGAAATGAGCAGCAAGGCTGAGGACAGAG...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATGGTGGCTGTGGTGGCTaGTGCTGCTGTAAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHGGCGG*CCCKGS
Trigger: GGACCCCTTACAGCAGCAGCAGCCACCACAGCCACC...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGTGGCACACTGTACACTaGTATGGGGTGGAAGATATA +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEWHTVH*YGVEDI
Trigger: TATATCTTCCACCCCATACCAGTGTACAGTGTGCCA...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGTTTGTAGACGGCACCTaGGTTGATGTCAATATCCTG +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEFVDGT*VDVNIL
Trigger: CAGGATATTGACATCAACCCAGGTGCCGTCTACAAA...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTGGAAGGTGGAGTTCTaGAAGCGGGGGCCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIWKVEF*KRGPLP
Trigger: AGGCAGCGGCCCCCGCTTCCAGAACTCCACCTTCCA...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGTCACAGTGCTTACACTaGAAGGTGGAGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTSQCLH*KVEFWK
Trigger: CTTCCAGAACTCCACCTTCCAGTGTAAGCACTGTGA...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCGCATGTTCACCAGCATaGGCTTTGAGGATGTGTGTC +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVACSPA*ALRMCV
Trigger: GACACACATCCTCAAAGCCCATGCTGGTGAACATGC...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTGAGACTGACAATCCGTaGCCGGGGAAGGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIETDNP*PGKGQG
Trigger: GCCCTGACCCTTCCCCGGCCACGGATTGTCAGTCTC...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCGTTCCTCCGTGTGCTTaGTCTCATAGTAGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVVPPCA*SHSSRA
Trigger: AGCTCTGCTACTATGAGACCAAGCACACGGAGGAAC...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGTGCTCTGCAAATTGCTaGCTATCTCGTCAATCCTTG +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTECSANC*LSRQSL
Trigger: CAAGGATTGACGAGATAGCCAGCAATTTGCAGAGCA...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACTGAAGGGTCCTTCTaGCTTTCACATTCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTETEGSF*LSHSGV
Trigger: TACTCCAGAATGTGAAAGCCAGAAGGACCCTTCAGT...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGTGGGGAACCCATGTTaGACATTTTGGGAGACATTG +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTVGNPC*TFWETL
Trigger: CAATGTCTCCCAAAATGTCCAACATGGGTTCCCCAC...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCAGCACTGCCTACATTTaGGCGCTCGAAGTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVSTAYI*ALEVSF
Trigger: AAACGAAACTTCGAGCGCTCAAATGTAGGCAGTGCT...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCAGGGTGGTCTTTCTTaGTATGCTTCCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVQGGLS*YASSVH
Trigger: ATGCACTGAGGAAGCATATCAAGAAAGACCACCCTG...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTCTTGGTAATGGTTTGTaGTGTCCCAGATGGAGACGG +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFLGNGL*CPRWRR
Trigger: CCGTCTCCATCTGGGACATCACAAACCATTACCAAG...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCTTAGCTGAAGCCAGATaGATGCTTTTCTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVLAEAR*MLFSGE
Trigger: TTCCCCAGAGAAAAGCATTCATCTGGCTTCAGCTAA...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGCAATGCCTTTCTTGCTaGAGGACTGGAAGGAACATA +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTQCLSC*RTGRNI
Trigger: TATGTTCCTTCCAGTCCTTCAGCAAGAAAGGCATTG...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGAAGGCCTCTCTTGTTTaGAATCTGCAAAAGCACCAT +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEKASLV*NLQKHH
Trigger: ATGGTGCTTTTGCAGATTTCAAACAAGAGAGGCCTT...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGCCACTTTCCTCTCCTTaGTCTTTGGCACCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREPLSSP*SLAPLL
Trigger: TAGAAGAGGTGCCAAAGATCAAGGAGAGGAAAGTGG...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACCACTTTCCTCTCCTTaGTCTTTGGCACCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSPLSSP*SLAPLL
Trigger: TAGAAGAGGTGCCAAAGATCAAGGAGAGGAAAGTGG...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCATGTTGTAGGAGGACTTaGAAGAGCAGAGTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSCCRRT*KSRVCS
Trigger: GCTGCAAACTCTGCTCTTTCAAGTCCTCCTACAACA...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCCACTCAGAGCCCTGTaGGAACGCCCGTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHPLRAL*ERPSTE
Trigger: TTCTGTGGACGGGCGTTCTCACAGGGCTCTGAGTGG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGAATGTTTGTGCTGCTaGTGGACTCTTAGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREECLCC*WTLSPF
Trigger: GAAAGGGCTAAGAGTCCATCAGCAGCACAAACATTC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTGAGGTATACGAGCACTaGCTACATTTGAGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFEVYEH*LHLSAR
Trigger: TCGAGCGCTCAAATGTAGGCAGTGCTCGTATACCTC...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGCTGAAGCCAGATGAATaGTTTTCTCTGGGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTLKPDE*FSLGKV
Trigger: GACTTTCCCCAGAGAAAAGCATTCATCTGGCTTCAG...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTTGTACGGACAATGCCTaGATTTGTAGACGGCACCTG +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFCTDNA*ICRRHL
Trigger: CAGGTGCCGTCTACAAATGCAGGCATTGTCCGTACA...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCGCAGTGGGTGTAATATaGATCAATGTCGTGGCGCTT +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVAVGVI*INVVAL
Trigger: AAGCGCCACGACATTGATGCATATTACACCCACTGC...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGCAGTGGGTGTAATATaGATCAATGTCGTGGCGCTT +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSAVGVI*INVVAL
Trigger: AAGCGCCACGACATTGATGCATATTACACCCACTGC...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGCCCTCTTTAAGTCCCTaGTGTGGTGGTCTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREPSLSP*CGGLCN
Trigger: ATTACACAGACCACCACAGCAGGGACTTAAAGAGGG...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACCCTCTTTAAGTCCCTaGTGTGGTGGTCTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSPSLSP*CGGLCN
Trigger: ATTACACAGACCACCACAGCAGGGACTTAAAGAGGG...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGAGCTCGGCTATGCTTTaGAATTTGCTATCACAGTGC +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTSSAML*NLLSQC
Trigger: GCACTGTGATAGCAAATTGCAAAGCATAGCCGAGCT...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGCTGCATATTTCTGCTTaGTCAAAAGCTGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTELHISA*SKAVSS
Trigger: GGAGGAAACAGCTTTTGAGCAAGCAGAAATATGCAG...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGTGCTTTTCTATGTGTTaGTGGAGACTCTCGTCACTG +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTCFSMC*WRLSSL
Trigger: CAGTGACGAGAGTCTCCAGCAACACATAGAAAAGCA...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTTGTCCTCAGCCTTGCTaGTCATTTCGTCGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFCPQPC*SFRRPC
Trigger: ACAAGGACGACGAAATGAGCAGCAAGGCTGAGGACA...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGACTTGGTTGGTATCATaGAATGACATGCCGTGTCTC +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTTWLVS*NDMPCL
Trigger: GAGACACGGCATGTCATTGCATGATACCAACCAAGT...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATGGGAGAGGATGGGTCTaGCCCAGCCCAGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHGRGWV*PSPEFG
Trigger: ACCAAACTCTGGGCTGGGCCAGACCCATCCTCTCCC...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGCACTGTACACTGGTATaGGGTGGAAGATATAGCAGG +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREHCTLV*GGRYSR
Trigger: CCTGCTATATCTTCCACCCCATACCAGTGTACAGTG...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTAGGGGCTCACTTCAGTaGTTATCTCAGGTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFRGSLQ*LSQVQG
Trigger: CCCTTGAACCTGAGATAACCACTGAAGTGAGCCCCT...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTCCGTCACGGAGACCTaGGAGGGGCTCACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTISVTET*EGLTSV
Trigger: CACTGAAGTGAGCCCCTCCCAGGTCTCCGTGACGGA...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCCTTGCGGATGGGGTTaGTGTAGGCACACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHPCGWG*CRHTGH
Trigger: GTGCCCTGTGTGCCTACACCAACCCCATCCGCAAGG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAGGCATGCTGCTTCTTTaGGAACACCCCCGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLGMLLL*EHPRVA
Trigger: CGCCACCCGGGGGTGTTCCCAAAGAAGCAGCATGCC...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCTCTTCTTCCATCAGTaGGGGTTTCTCGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVLFFHQ*GFLVFI
Trigger: GATGAACACGAGAAACCCCCACTGATGGAAGAAGAG...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACTCTTCTTCCATCAGTaGGGGTTTCTCGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSLFFHQ*GFLVFI
Trigger: GATGAACACGAGAAACCCCCACTGATGGAAGAAGAG...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTCCACCAGTGTGCCACTaGCGTCTCTGGCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIPPVCH*RLWLLP
Trigger: TGGAAGCAGCCAGAGACGCCAGTGGCACACTGGTGG...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR CCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCCACCAGTGTGCCACTaGCGTCTCTGGCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHPPVCH*RLWLLP
Trigger: TGGAAGCAGCCAGAGACGCCAGTGGCACACTGGTGG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR CCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGGAATGTTCCTTCAACTaGCTGATTGTCATGGTGGAA +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEECSFN*LIVMVE
Trigger: TTCCACCATGACAATCAGCCAGTTGAAGGAACATTC...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGTAAGAGGAGTCATTaGAGTCTTCCACTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVSKRSH*SLPLLR
Trigger: CCGAAGAAGTGGAAGACTCCAATGACTCCTCTTACT...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAGACAGCGGAGATCTTTaGGGCCTTCCTCCGGGACCG +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLDSGDL*GLPPGP
Trigger: CGGTCCCGGAGGAAGGCCCCAAAGATCTCCGCTGTC...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTAACGGCACACTTCAATaGGGACAACTCGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFNGTLQ*GQLALL
Trigger: GAGAAGAGCGAGTTGTCCCCATTGAAGTGTGCCGTT...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTGTTCCTCCGTGTGCTTaGTCTCATAGTAGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFVPPCA*SHSSRA
Trigger: AGCTCTGCTACTATGAGACCAAGCACACGGAGGAAC...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCGCCCTTTCAGAGTCATaGTGGAATAACTACACATGG +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVALSES*WNNYTW
Trigger: CCATGTGTAGTTATTCCACCATGACTCTGAAAGGGC...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGACCTCAAATGATAATTaGGAAAGGGCAGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTTSNDN*ERAEPL
Trigger: CAGAGGCTCTGCCCTTTCCCAATTATCATTTGAGGT...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCTTAGCTGAAGCCAGATaGATGCTTTTCTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVLAEAR*MLFSGE
Trigger: TTCCCCAGAGAAAAGCATTCATCTGGCTTCAGCTAA...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTCACACAGGGCACACTTaGAGAGATTGTTTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFHTGHT*RDCFCP
Trigger: AGGGCAAAAACAATCTCTTCAAGTGTGCCCTGTGTG...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTGTTGGGCTTGTCACTaGTGGTCCTGGAGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTICWACH*WSWRPQ
Trigger: TTGCGGCCTCCAGGACCATCAGTGACAAGCCCAACA...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTGTTGGGCTTGTCACTaGTGGTCCTGGAGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHCWACH*WSWRPQ
Trigger: TTGCGGCCTCCAGGACCATCAGTGACAAGCCCAACA...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGAAGGCCTCTCTTGTTTaGAATCTGCAAAAGCACCAT +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTKASLV*NLQKHH
Trigger: ATGGTGCTTTTGCAGATTTCAAACAAGAGAGGCCTT...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCGATCCAAGTTGTGTCTaGATGCAGAAACAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVDPSCV*MQKQRS
Trigger: GCTCCTTTGTTTCTGCATTCAGACACAACTTGGATC...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGTGTCATGGTGGAAAATaGGCACCAAGAACACTTGTA +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTCHGGK*APRTLV
Trigger: TACAAGTGTTCTTGGTGCTCATTTTCCACCATGACA...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAGTGAGGAGAGGAGACTaGCAATCCGTGGCCGGGGAA +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLVRRGD*QSVAGE
Trigger: TTCCCCGGCCACGGATTGTCAGTCTCCTCTCCTCAC...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGAGCAGTCTTTGCATTTaGAAAGCTTCTTCCCACCGT +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVRESSLCI*KASSHR
Trigger: ACGGTGGGAAGAAGCTTTTCAAATGCAAAGACTGCT...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAAGCAGTCTTTGCATTTaGAAAGCTTCTTCCCACCGT +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSSSLCI*KASSHR
Trigger: ACGGTGGGAAGAAGCTTTTCAAATGCAAAGACTGCT...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp TCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCGGCCACATGGCACCTGGTGTGGTaGCTGCAGCGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SMSLQSTENRMRPKCAATWHLVW*LQRWRW
Trigger: CCACCTCCACCGCTGCAGTCACCACACCAGGTGCCA...TGTGGCCGCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGCAGTTTGGTCTGGTTaGTTTTGCTCTGCAAATTGC +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREAVWSG*FCSANC
Trigger: GCAATTTGCAGAGCAAAATCAACCAGACCAAACTGC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCGATATGCTTCCTCAGTaGATAGAAATAGGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVDMLPQ*IEIGGG
Trigger: ACCTCCCCCTATTTCTATGCACTGAGGAAGCATATC...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAACTTCTGGTAGTGGGCTaGCAGTCCCTTGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKLLVVG*QSLADG
Trigger: CCCATCCGCAAGGGACTGGCAGCCCACTACCAGAAG...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAAGGTCAGCTCGGCTATaGTTTGCAATTTGCTATCAC +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSRSARL*FAICYH
Trigger: GTGATAGCAAATTGCAAAGCATAGCCGAGCTGACCT...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGAGGTCAGCTCGGCTATaGTTTGCAATTTGCTATCAC +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVRERSARL*FAICYH
Trigger: GTGATAGCAAATTGCAAAGCATAGCCGAGCTGACCT...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTCTGCCTTCTGTTCCGTaGCAGCAGCAGTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTILPSVP*QQQSQK
Trigger: CTTCTGGGACTGCTGCTGGCACGGAACAGAAGGCAG...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGACTTGGTTGGTATCATaGAATGACATGCCGTGTCTC +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVRETWLVS*NDMPCL
Trigger: GAGACACGGCATGTCATTGCATGATACCAACCAAGT...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCGACATCCTGGATGTGTaGCTTGAGATCTTCGTAAGA +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVDILDV*LEIFVR
Trigger: TCTTACGAAGATCTCAAGGCACACATCCAGGATGTC...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGTTTTGCTCTGCAAATTaGTGGCTATCTCGTCAATCC +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTFCSAN*WLSRQS
Trigger: GGATTGACGAGATAGCCAGCAATTTGCAGAGCAAAA...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAAAGAGTGGGAGAGGATaGGTCTGGCCCAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLKSGRG*VWPSPE
Trigger: CTCTGGGCTGGGCCAGACCCATCCTCTCCCACTCTT...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGTTTGTAGACGGCACCTaGGTTGATGTCAATATCCTG +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREFVDGT*VDVNIL
Trigger: CAGGATATTGACATCAACCCAGGTGCCGTCTACAAA...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATCCGTCACGGAGACCTaGGAGGGGCTCACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLSVTET*EGLTSV
Trigger: CACTGAAGTGAGCCCCTCCCAGGTCTCCGTGACGGA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTTCACAGTGCTTACACTaGAAGGTGGAGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFSQCLH*KVEFWK
Trigger: CTTCCAGAACTCCACCTTCCAGTGTAAGCACTGTGA...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCCATCCAGGAACAGGTaGGAAGGGTCTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHPSRNR*EGSSAS
Trigger: GGAGGCTGAAGACCCTTCCCACCTGTTCCTGGATGG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR CCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAAGTAAGAGGAGTCATTaGAGTCTTCCACTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSSKRSH*SLPLLR
Trigger: CCGAAGAAGTGGAAGACTCCAATGACTCCTCTTACT...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGAGTATTTTGACAGTTTaGAACGGCACACTTCAATGG +
Preference number: 4 (lower is better)
Translates to: SSVSGSLGFHTLSERVTESILTV*NGTLQW
Trigger: CCATTGAAGTGTGCCGTTCCAAACTGTCAAAATACT...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGAAAGTCTATCCCAATTaGCTCATCGTCTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREKVYPN*LIVFLG
Trigger: GCCAAGGAAGACGATGAGCCAATTGGGATAGACTTT...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTCATCGGCATTGGCCTTaGAGTCCCGGTGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIHRHWP*SPGASS
Trigger: AGAAGAAGCACCGGGACTTCAAGGCCAATGCCGATG...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTGGGTGGGGATGGGATaGTCACCTTGTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHWVGMG*SPCWAC
Trigger: ACAAGCCCAACAAGGTGATCATCCCATCCCCACCCA...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTCAATGCCTTTCTTGCTaGAGGACTGGAAGGAACATA +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFQCLSC*RTGRNI
Trigger: TATGTTCCTTCCAGTCCTTCAGCAAGAAAGGCATTG...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATCTTGCCAGGGCGGCTaGCTGGTAGTGATTCAGCTG +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLSCQGG*LVVIQL
Trigger: CAGCTGAATCACTACCAGTCAGCCGCCCTGGCAAGA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATGCTCATCCCGAAGGTaGGTGTCCAGTTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLCSSRR*VSSSSV
Trigger: CACGGAGGAACTGGACACTCACCTTCGGGATGAGCA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTCAGAACTGTTCAGCTaGAAGGGAGCAGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTISELFS*KGAGGR
Trigger: TCGGCCTCCTGCTCCCTTGCAGCTGAACAGTTCTGA...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTCTGAAGCCAGATGAATaGTTTTCTCTGGGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFLKPDE*FSLGKV
Trigger: GACTTTCCCCAGAGAAAAGCATTCATCTGGCTTCAG...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCAATTTGCTATCACAGTaGTTACACTGGAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVNLLSQ*LHWKVE
Trigger: CTCCACCTTCCAGTGTAAGCACTGTGATAGCAAATT...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTAGGTCAGCTCGGCTATaGTTTGCAATTTGCTATCAC +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFRSARL*FAICYH
Trigger: GTGATAGCAAATTGCAAAGCATAGCCGAGCTGACCT...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCTGCATATTTCTGCTTaGTCAAAAGCTGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVLHISA*SKAVSS
Trigger: GGAGGAAACAGCTTTTGAGCAAGCAGAAATATGCAG...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATGTGAAGAACGGCTTCTaGCTTCTGTTCCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHVKNGF*LLFRAS
Trigger: GCTGGCACGGAACAGAAGGCAGAAGCCGTTCTTCAC...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTTGCTTTTCTATGTGTTaGTGGAGACTCTCGTCACTG +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFCFSMC*WRLSSL
Trigger: CAGTGACGAGAGTCTCCAGCAACACATAGAAAAGCA...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGTAACAGATCCTTGCAGGGGTCCTaGAGTGACACAGGTGGAACC +
Preference number: 4 (lower is better)
Translates to: KQTKQSSQHTRRPAQCNRSLQGS*SDTGGT
Trigger: GGTTCCACCTGTGTCACTGCAGGACCCCTGCAAGGA...TCTGTTACATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCGGTTCATTATCATTCTaGGCTTCAGAGACATTAGGC +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVGSLSF*ASETLG
Trigger: GCCTAATGTCTCTGAAGCGCAGAATGATAATGAACC...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGATGAATGCTTTTCTCTaGGGAAAGTCTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREMNAFL*GKSCIL
Trigger: GAGGATGCAAGACTTTCCCCAGAGAAAAGCATTCAT...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGTTGATGTCAATATCCTaGGCAAAATCAGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVRELMSIS*AKSAAF
Trigger: GAAGGCTGCTGATTTTGCCCAGGATATTGACATCAA...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGAATGTTCCTTCAACTaGCTGATTGTCATGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVREECSFN*LIVMVE
Trigger: TTCCACCATGACAATCAGCCAGTTGAAGGAACATTC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTCCACTTCTTCGGCTaGAGTGGCCTTCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHFHFFG*SGLLGG
Trigger: TCCTCCCAGAAGGCCACTCCAGCCGAAGAAGTGGAA...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCTCCACAGAATTCACATaGAAATCGCTTCTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVSTEFT*KSLLCV
Trigger: AACACAGAGAAGCGATTTCCATGTGAATTCTGTGGA...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGTCCACAGAATTCACATaGAAATCGCTTCTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTSTEFT*KSLLCV
Trigger: AACACAGAGAAGCGATTTCCATGTGAATTCTGTGGA...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCAGCCACTACACAGATaGTTACTGTTTCGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVQPLHR*LLFRSL
Trigger: TAAAGAGCGAAACAGTAACCATCTGTGTAGTGGCTG...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGTCCTGCAGTTTGGTCTaGTTGATTTTGCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVRESCSLV*LILLCK
Trigger: TTTGCAGAGCAAAATCAACCAGACCAAACTGCAGGA...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGAGTGACCTTTATTTCTaGGTGTCTTTTCTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTSDLYF*VSFLVV
Trigger: CACTACCAGAAAAGACACCCAGAAATAAAGGTCACT...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTTATAGCAGGGTTAGCTaGAGCCAGATGAATGCTTTT +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFYSRVS*SQMNAF
Trigger: AAAAGCATTCATCTGGCTTCAGCTAACCCTGCTATA...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATCTTCCCGTAATGGGTaGGGAGGCCGTGCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLSSRNG*GGRASC
Trigger: ACAACTTGCACGGCCTCCTCACCCATTACGGGAAGA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGTAACAGATCTTCCCGTAATGGGTaGGGAGGCCGTGCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: KQTKQSSQHTRRPAQCNRSSRNG*GGRASC
Trigger: ACAACTTGCACGGCCTCCTCACCCATTACGGGAAGA...TCTGTTACATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTGCGAGGTAGAGAAGTaGGCAGTGGACATAGGATCC +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHCEVEK*AVDIGS
Trigger: GGATCCTATGTCCACTGCTCACTTCTCTACCTCGCA...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATGTGGATGTTCAAGTGTaGGGTCAGCTCGGCTATGCT +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHVDVQV*GQLGYA
Trigger: AGCATAGCCGAGCTGACCTCACACTTGAACATCCAC...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTAAGGCCTCTCTTGTTTaGAATCTGCAAAAGCACCAT +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFKASLV*NLQKHH
Trigger: ATGGTGCTTTTGCAGATTTCAAACAAGAGAGGCCTT...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTCACCAGCATGGGCTTTaGGGATGTGTGTCTTCAACC +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIHQHGL*GCVSST
Trigger: GGTTGAAGACACACATCCTCAAAGCCCATGCTGGTG...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAGGAGGGGTGAGCATGTaGGGAGAGGAGACTGACAAT +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLGGVSM*GEETDN
Trigger: ATTGTCAGTCTCCTCTCCTCACATGCTCACCCCTCC...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTGACAACGGTGTTCACTaGAGGGTCCTTCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIDNGVH*RVLLAF
Trigger: GAAAGCCAGAAGGACCCTTCAGTGAACACCGTTGTC...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAAAGTAAAGCTCAATACTaGGGTCTGGTGGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKSKAQY*GLVAGA
Trigger: AGCCCCCGCCACCAGACCTCAGTATTGAGCTTTACT...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTACTCTGGGGAAAGTCTTaGATCCTCTGGGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLLWGKS*ILWALS
Trigger: GCTGAGTGCCCAGAGGATGCAAGACTTTCCCCAGAG...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATAACTTGCTGGCATGCTaGTTCTTTGGGAACACCCCC +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHNLLAC*FFGNTP
Trigger: GGGGGTGTTCCCAAAGAAGCAGCATGCCAGCAAGTT...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTCCCAACTTGCTGGCATaGTGCTTCTTTGGGAACACC +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIPNLLA*CFFGNT
Trigger: GGTGTTCCCAAAGAAGCAGCATGCCAGCAAGTTGGG...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCTATGCTTTGCAATTTaGTATCACAGTGCTTACACT +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVLCFAI*YHSAYT
Trigger: AGTGTAAGCACTGTGATAGCAAATTGCAAAGCATAG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCTCTTGTTTGAAATCTaGAAAAGCACCATCTGCATA +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVLLFEI*KSTICI
Trigger: TATGCAGATGGTGCTTTTGCAGATTTCAAACAAGAG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCAAGTTGTGTCTGAATaGAGAAACAAAGGAGCAATA +
Preference number: 4 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVQVVSE*RNKGAI
Trigger: TATTGCTCCTTTGTTTCTGCATTCAGACACAACTTG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGCGGAAAACTACTCCCTaGAAGTATTTTGACAGTTTG +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVRERKTTP*KYFDSL
Trigger: CAAACTGTCAAAATACTTGCAGGGAGTAGTTTTCCG...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTCTATGGAGGGCAGCTaGATACTCTCCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHSMEGS*ILSSTI
Trigger: GATGGTGGAGGAGAGTATGCAGCTGCCCTCCATAGA...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAAATAACTACACATGGTaGACTTGTAAGGGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSNNYTW*TCKGAK
Trigger: CTTTGCACCCTTACAAGTGCACCATGTGTAGTTATT...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTACTCATCACCATTCATaGCCCAGGGGTGGAACGCTT +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTITHHHS*PRGGTL
Trigger: AAGCGTTCCACCCCTGGGCCATGAATGGTGATGAGT...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTATGAATGCTTTTCTCTaGGGAAAGTCTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFMNAFL*GKSCIL
Trigger: GAGGATGCAAGACTTTCCCCAGAGAAAAGCATTCAT...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGTAACAGACACCGGAACACAGTGTaGGAGACCAGATGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: KQTKQSSQHTRRPAQCNRHRNTV*ETRCEV
Trigger: TACCTCGCATCTGGTCTCCCACACTGTGTTCCGGTG...TCTGTTACATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATAAGTACTTGCAGAGCTaGCACCGGAACACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHKYLQS*HRNTVW
Trigger: CCACACTGTGTTCCGGTGCCAGCTCTGCAAGTACTT...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTCCTCTCCTGGCGTTTaGCACGCTTCTGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHSSPGV*HASGIP
Trigger: AGGAATTCCAGAAGCGTGCCAAACGCCAGGAGAGGA...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATGCCACTGGCGTCTCTaGCTGCTTCCAATCCATCCA +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLCHWRL*LLPIHP
Trigger: TGGATGGATTGGAAGCAGCCAGAGACGCCAGTGGCA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR CCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATTCCACTTCTTCGGCTaGAGTGGCCTTCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLFHFFG*SGLLGG
Trigger: TCCTCCCAGAAGGCCACTCCAGCCGAAGAAGTGGAA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCAGTATTTTGACAGTTTaGAACGGCACACTTCAATGG +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVSILTV*NGTLQW
Trigger: CCATTGAAGTGTGCCGTTCCAAACTGTCAAAATACT...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGTCCACAGAATTCACATaGAAATCGCTTCTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LGEVFCVREPRFPHTVRESTEFT*KSLLCV
Trigger: AACACAGAGAAGCGATTTCCATGTGAATTCTGTGGA...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTCTTCCTTGGCCTCTATaGAGGGCAGCTGCATACTCT +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTILPWPL*RAAAYS
Trigger: AGAGTATGCAGCTGCCCTCCATAGAGGCCAAGGAAG...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCTTCCTTGGCCTCTATaGAGGGCAGCTGCATACTCT +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHLPWPL*RAAAYS
Trigger: AGAGTATGCAGCTGCCCTCCATAGAGGCCAAGGAAG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGTAACAGAACAGGTAGGTGGAGTTaGAGGTGGGGCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: KQTKQSSQHTRRPAQCNRTGRWS*RWGWVH
Trigger: ATGAACCCAGCCCCACCTCCAACTCCACCTACCTGT...TCTGTTACATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAGGCTCGCAGCATTCATaGACAGGTAGGTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLGSQHS*TGRWSW
Trigger: CCAACTCCACCTACCTGTCCATGAATGCTGCGAGCC...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTCTTGGTAATGGTTTGTaGTGTCCCAGATGGAGACGG +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTILGNGL*CPRWRR
Trigger: CCGTCTCCATCTGGGACATCACAAACCATTACCAAG...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTGGACATTATTGTGCTTaGTCCGGTAGTGCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIGHYCA*SGSAWQ
Trigger: TTGCCAGGCACTACCGGATCAAGCACAATAATGTCC...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAAGTTCCTCGCTCAGCTaGGGAGAGTCATCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLSSSLS*GESSLG
Trigger: ACCCAAAGATGACTCTCCTCAGCTGAGCGAGGAACT...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp TCACAGACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCACCCGGTAATGGCGCCTaGTGCTCTGGATGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: SQTSSPGMKLFSTFEMRPPGNGA*CSGCSQ
Trigger: CTGGCTACATCCAGAGCATCAGGCGCCATTACCGGG...TGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGTCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATTCATCTGTTCCAGCTaGTCCAAGTTCACCCGGCCA +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLFICSS*SKFTRP
Trigger: TGGCCGGGTGAACTTGGATCAGCTGGAACAGATGAA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTGGAACAGAAGTACTTaGAGAGCTGGCACCGGAACA +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIWNRST*RAGTGT
Trigger: TGTTCCGGTGCCAGCTCTGCAAGTACTTCTGTTCCA...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCTATGCTTTGCAATTTaGTATCACAGTGCTTACACT +
Preference number: 4 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVLCFAI*YHSAYT
Trigger: AGTGTAAGCACTGTGATAGCAAATTGCAAAGCATAG...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAACTGGCGTCTCTGGCTaGTTCCAATCCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLTGVSG*FQSIQE
Trigger: TTCCTGGATGGATTGGAAGCAGCCAGAGACGCCAGT...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR GCA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAACTCTGTCCTCAGCCTTaGTGCTCATTTCGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKLCPQP*CSFRRP
Trigger: AGGACGACGAAATGAGCAGCAAGGCTGAGGACAGAG...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATCTATGGAGGGCAGCTaGATACTCTCCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLSMEGS*ILSSTI
Trigger: GATGGTGGAGGAGAGTATGCAGCTGCCCTCCATAGA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAATCTATGGAGGGCAGCTaGATACTCTCCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKSMEGS*ILSSTI
Trigger: GATGGTGGAGGAGAGTATGCAGCTGCCCTCCATAGA...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp TCACAGACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAGCGCTCAACAACCTCTaGCGGCAGTTCCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SQTSSPGMKLFSTFEMRPALNNL*RQFLAG
Trigger: CCCTGCAAGGAACTGCCGGCAGAGGTTGTTGAGCGC...TGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGTCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGTAACAGATGGGTCAGGACGCCATaGATGCGAGTGTTGATGTAC +
Preference number: 4 (lower is better)
Translates to: KQTKQSSQHTRRPAQCNRWVRTP*MRVLMY
Trigger: GTACATCAACACTCGCATCCATGGCGTCCTGACCCA...TCTGTTACATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATAGGGGCTCACTTCAGTaGTTATCTCAGGTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHRGSLQ*LSQVQG
Trigger: CCCTTGAACCTGAGATAACCACTGAAGTGAGCCCCT...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATTTTTGCCCTCGGGCTaGGCACGGACATTATTGTGC +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLFLPSG*ARTLLC
Trigger: GCACAATAATGTCCGTGCCCAGCCCGAGGGCAAAAA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGTAACAGATCCTCTCCTGGCGTTTaGCACGCTTCTGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: KQTKQSSQHTRRPAQCNRSSPGV*HASGIP
Trigger: AGGAATTCCAGAAGCGTGCCAAACGCCAGGAGAGGA...TCTGTTACATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATGCATGTTCACCAGCATaGGCTTTGAGGATGTGTGTC +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHACSPA*ALRMCV
Trigger: GACACACATCCTCAAAGCCCATGCTGGTGAACATGC...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCGGTGCAGCACTATGTaGTCGATCATGTTGCGTTTG +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHRCSTM*SIMLRL
Trigger: CAAACGCAACATGATCGACCACATAGTGCTGCACCG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTTGCTGGAAGAGGGGTaGCTATCCGTCTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTILLEEG*LSVSFS
Trigger: GGAAAATGAGACGGATAGCCACCCCTCTTCCAGCAA...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATCTTCACAGTGTTGCTaGAAGAGGGGTGGCTATCCG +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLSSQCC*KRGGYP
Trigger: CGGATAGCCACCCCTCTTCCAGCAACACTGTGAAGA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTAGCACTGCCTACATTTaGGCGCTCGAAGTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTISTAYI*ALEVSF
Trigger: AAACGAAACTTCGAGCGCTCAAATGTAGGCAGTGCT...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCAGGGTGGTCTTTCTTaGTATGCTTCCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHQGGLS*YASSVH
Trigger: ATGCACTGAGGAAGCATATCAAGAAAGACCACCCTG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAGGACATTATTGTGCTTaGTCCGGTAGTGCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLGHYCA*SGSAWQ
Trigger: TTGCCAGGCACTACCGGATCAAGCACAATAATGTCC...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCCACTTTCCTCTCCTTaGTCTTTGGCACCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHPLSSP*SLAPLL
Trigger: TAGAAGAGGTGCCAAAGATCAAGGAGAGGAAAGTGG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTCCCTGCAAGTATTTTaGCAGTTTGGAACGGCACAC +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTISLQVF*QFGTAH
Trigger: GTGTGCCGTTCCAAACTGTCAAAATACTTGCAGGGA...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATGTCCTCAGCCTTGCTaGTCATTTCGTCGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLCPQPC*SFRRPC
Trigger: ACAAGGACGACGAAATGAGCAGCAAGGCTGAGGACA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTAGAGTCATCTTTGGGTaGGGATGGGATGATCACCTT +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIRVIFG*GWDDHL
Trigger: AAGGTGATCATCCCATCCCCACCCAAAGATGACTCT...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATAGAGTCATCTTTGGGTaGGGATGGGATGATCACCTT +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHRVIFG*GWDDHL
Trigger: AAGGTGATCATCCCATCCCCACCCAAAGATGACTCT...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTCGTTTGGCACGCTTCTaGAATTCCTCATTGTGGATG +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIRLARF*NSSLWM
Trigger: CATCCACAATGAGGAATTCCAGAAGCGTGCCAAACG...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAGCATGTTCACCAGCATaGGCTTTGAGGATGTGTGTC +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLACSPA*ALRMCV
Trigger: GACACACATCCTCAAAGCCCATGCTGGTGAACATGC...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTACGGTGCAGCACTATGTaGTCGATCATGTTGCGTTTG +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLRCSTM*SIMLRL
Trigger: CAAACGCAACATGATCGACCACATAGTGCTGCACCG...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAAAGCAGGGGCAGGTGGTaGCGCTGTGGACTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKSRGRW*RCGLLQ
Trigger: CTGAAGGAGTCCACAGCGCCACCACCTGCCCCTGCT...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAACTGTGGCTGCTGGGTTaGTGGTGGCACCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKLWLLG*WWHLVW
Trigger: CCACACCAGGTGCCACCACCAACCCAGCAGCCACAG...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCCATGTTGGACATTTTaGGAGACATTGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHPCWTF*ETLEHP
Trigger: TGGGTGCTCCAATGTCTCCCAAAATGTCCAACATGG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp TGTAAATTCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCCCTCAGCGGTCACCTTaGTGGCCGGGTGTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: CKFYVITVNRKQNASKMCPQRSP*WPGVAS
Trigger: AGAAGCGACACCCGGCCATCAAGGTGACCGCTGAGG...GCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGAATTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTCTCATAGTGGATTTTaGGTTTCTCCAGAGTGCCGT +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHSHSGF*VSPECR
Trigger: ACGGCACTCTGGAGAAACTCAAAATCCACTATGAGA...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAACACACAGGGCACACTTaGAGAGATTGTTTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKHTGHT*RDCFCP
Trigger: AGGGCAAAAACAATCTCTTCAAGTGTGCCCTGTGTG...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTGATCCAAGTTGTGTCTaGATGCAGAAACAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIDPSCV*MQKQRS
Trigger: GCTCCTTTGTTTCTGCATTCAGACACAACTTGGATC...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAATGTTGTAGGAGGACTTaGAAGAGCAGAGTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKCCRRT*KSRVCS
Trigger: GCTGCAAACTCTGCTCTTTCAAGTCCTCCTACAACA...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AATACACAAAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATTCACAGAATTCGCAGTaGAGAACGGCTTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: NTQSKQNRVHSTHEGQPNSQNSQ*RTASAF
Trigger: GAAGGCAGAAGCCGTTCTTCACTGCGAATTCTGTGA...ATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTTTGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATAACTCCACCTCTGTCTaGTTACTAGCATTCATGGAC +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHNSTSV*LLAFMD
Trigger: GTCCATGAATGCTAGTAATCAGACAGAGGTGGAGTT...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATGTTTCTTCATCATGTaGTCGCACCAGCGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLCFFIM*SHQRSL
Trigger: CAGAGAACGCTGGTGCGATCACATGATGAAGAAACA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAACAAGGCCAGAATTATaGGGTGACTTCGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLTRPEL*GDFGFI
Trigger: GATGAAGCCGAAGTCACCTCATAATTCTGGCCTTGT...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATGACAGGCTTTCGCTTTaGGAATTCACAGTATCCCAA +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHDRLSL*EFTVSQ
Trigger: TTGGGATACTGTGAATTCTCAAAGCGAAAGCCTGTC...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGTAACAGACCGAATGGTCAAAGTTaGGTACATTCATGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KQTKQSSQHTRRPAQCNRPNGQS*VHSWPL
Trigger: CAGAGGCCATGAATGTACTCAACTTTGACCATTCGG...TCTGTTACATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCTGAAGCCAGATGAATaGTTTTCTCTGGGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHLKPDE*FSLGKV
Trigger: GACTTTCCCCAGAGAAAAGCATTCATCTGGCTTCAG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTTCATCCTCCAACATTaGATCAAGCAAGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIFILQH*IKQAVS
Trigger: GGACACTGCTTGCTTGATGCAATGTTGGAGGATGAA...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR GCA 90 bp TCACAGACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCATCAGAGCCCATGAGCTaGTCTGCAGACAGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SQTSSPGMKLFSTFEMRPSEPMS*SADSPD
Trigger: GTCAGGACTGTCTGCAGAGCAGCTCATGGGCTCTGA...TGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTTTCTTCACAGTGTTaGTGGAAGAGGGGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHFSSQC*WKRGGY
Trigger: ATAGCCACCCCTCTTCCAGCAACACTGTGAAGAAAA...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp TCACAGACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCACAGGCACCTGTACACTaGGCTGTGATCATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SQTSSPGMKLFSTFEMRPQAPVH*AVIIGV
Trigger: GACCCCAATGATCACAGCGCAGTGTACAGGTGCCTG...TGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGTCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AATACACAAAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATTGTCCACAGACACCATaGGCATGGTTTTCTGGATCC +
Preference number: 4 (lower is better)
Translates to: NTQSKQNRVHSTHEGQPNCPQTP*AWFSGS
Trigger: GGATCCAGAAAACCATGCGCATGGTGTCTGTGGACA...ATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTTTGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AATACACAAAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATCCACAACTGACCGATTaGTGTAGGAGCAGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: NTQSKQNRVHSTHEGQPNPQLTD*CRSSVC
Trigger: GCAAACACTGCTCCTACAGCAATCGGTCAGTTGTGG...ATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTTTGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCGGCCACAAAGTACTTGCAGAGCTaGCACCGGAACACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SMSLQSTENRMRPKCAATKYLQS*HRNTVW
Trigger: CCACACTGTGTTCCGGTGCCAGCTCTGCAAGTACTT...TGTGGCCGCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAATCACAGTGCTTACACTaGAAGGTGGAGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKSQCLH*KVEFWK
Trigger: CTTCCAGAACTCCACCTTCCAGTGTAAGCACTGTGA...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAACGTTTGGCACGCTTCTaGAATTCCTCATTGTGGATG +
Preference number: 4 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKRLARF*NSSLWM
Trigger: CATCCACAATGAGGAATTCCAGAAGCGTGCCAAACG...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTACAAAGGAGCAATACTaGCAGCTGTACTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTITKEQY*QLYLSS
Trigger: AGAGGACAAGTACAGCTGCCAGTATTGCTCCTTTGT...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTAAAGTCTATCCCAATTaGCTCATCGTCTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIKVYPN*LIVFLG
Trigger: GCCAAGGAAGACGATGAGCCAATTGGGATAGACTTT...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAACTGACCGTAATATCCTaGACTGTGGCCATAGTAACC +
Preference number: 4 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKLTVIS*TVAIVT
Trigger: GGTTACTATGGCCACAGTCCAGGATATTACGGTCAG...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTCTACAAAGTTATTCTTaGAGGACAATCCAAGAATTG +
Preference number: 4 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFLQSYS*RTIQEL
Trigger: CAATTCTTGGATTGTCCTCCAAGAATAACTTTGTAG...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATACGTCGCCATGCTCTTaGGAGCTGAATTCAAAATCT +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHTSPCS*ELNSKS
Trigger: AGATTTTGAATTCAGCTCCCAAGAGCATGGCGACGT...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATAGCAGGGTTAGCTaGAGCCAGATGAATGCTTTT +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIYSRVS*SQMNAF
Trigger: AAAAGCATTCATCTGGCTTCAGCTAACCCTGCTATA...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATCTCATAGTGGATTTTaGGTTTCTCCAGAGTGCCGT +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLSHSGF*VSPECR
Trigger: ACGGCACTCTGGAGAAACTCAAAATCCACTATGAGA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAAAGCCACTCGATGTCTTaGGCTTCGCCTTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKSHSMS*ASPSTS
Trigger: CGAGGTGGAAGGCGAAGCTCAAGACATCGAGTGGCT...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTGTCATGGTGGAAAATaGGCACCAAGAACACTTGTA +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHCHGGK*APRTLV
Trigger: TACAAGTGTTCTTGGTGCTCATTTTCCACCATGACA...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAGATATGCTTCCTCAGTaGATAGAAATAGGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLDMLPQ*IEIGGG
Trigger: ACCTCCCCCTATTTCTATGCACTGAGGAAGCATATC...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAAGATATGCTTCCTCAGTaGATAGAAATAGGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKDMLPQ*IEIGGG
Trigger: ACCTCCCCCTATTTCTATGCACTGAGGAAGCATATC...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCAAAAACGCAGTCCCTaGATCTGTATGTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHQKRSP*ICMFWL
Trigger: AAGCCAAAACATACAGATGCAGGGACTGCGTTTTTG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp TCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCGGCCACATGGAACAGAAGTACTTaGAGAGCTGGCACCGGAACA +
Preference number: 4 (lower is better)
Translates to: SMSLQSTENRMRPKCAATWNRST*RAGTGT
Trigger: TGTTCCGGTGCCAGCTCTGCAAGTACTTCTGTTCCA...TGTGGCCGCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTAATTTGCTATCACAGTaGTTACACTGGAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTINLLSQ*LHWKVE
Trigger: CTCCACCTTCCAGTGTAAGCACTGTGATAGCAAATT...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCTGCATATTTCTGCTTaGTCAAAAGCTGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHLHISA*SKAVSS
Trigger: GGAGGAAACAGCTTTTGAGCAAGCAGAAATATGCAG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTGCCCAGCTTCCACGTaGATAGTAAAAGCAGATTTA +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTICPAST*IVKADL
Trigger: TAAATCTGCTTTTACTATGCACGTGGAAGCTGGGCA...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATGCTTTTCTATGTGTTaGTGGAGACTCTCGTCACTG +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLCFSMC*WRLSSL
Trigger: CAGTGACGAGAGTCTCCAGCAACACATAGAAAAGCA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATGGCACACTGTACACTaGTATGGGGTGGAAGATATA +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLWHTVH*YGVEDI
Trigger: TATATCTTCCACCCCATACCAGTGTACAGTGTGCCA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp AAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGTAACAGATGGCACACTGTACACTaGTATGGGGTGGAAGATATA +
Preference number: 4 (lower is better)
Translates to: KQTKQSSQHTRRPAQCNRWHTVH*YGVEDI
Trigger: TATATCTTCCACCCCATACCAGTGTACAGTGTGCCA...TCTGTTACATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TGTAAATTCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCGTTGGTGGTGGCACCTaGTGTGGTGACTGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: CKFYVITVNRKQNASKMCVGGGT*CGDCSG
Trigger: ACCGCTGCAGTCACCACACCAGGTGCCACCACCAAC...GCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGAATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AATACACAAAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATAGCAGTCTTTGCATTTaGAAAGCTTCTTCCCACCGT +
Preference number: 4 (lower is better)
Translates to: NTQSKQNRVHSTHEGQPNSSLCI*KASSHR
Trigger: ACGGTGGGAAGAAGCTTTTCAAATGCAAAGACTGCT...ATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTTTGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp TCACAGACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCACTGTACACTGCGCTGTaGTCATTGGGGTCCAAGATA +
Preference number: 4 (lower is better)
Translates to: SQTSSPGMKLFSTFEMRPLYTAL*SLGSKI
Trigger: TATCTTGGACCCCAATGATCACAGCGCAGTGTACAG...TGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp TGTAAATTCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCAGGTGGCTCCTCTCATaGGAACGCAGCCCCTTCACA +
Preference number: 4 (lower is better)
Translates to: CKFYVITVNRKQNASKMCRWLLS*ERSPFT
Trigger: TGTGAAGGGGCTGCGTTCTCATGAGAGGAGCCACCT...GCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGAATTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAAATTTGCTATCACAGTaGTTACACTGGAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLNLLSQ*LHWKVE
Trigger: CTCCACCTTCCAGTGTAAGCACTGTGATAGCAAATT...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCGGAAAACTACTCCCTaGAAGTATTTTGACAGTTTG +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHRKTTP*KYFDSL
Trigger: CAAACTGTCAAAATACTTGCAGGGAGTAGTTTTCCG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTCGGAAAACTACTCCCTaGAAGTATTTTGACAGTTTG +
Preference number: 4 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIRKTTP*KYFDSL
Trigger: CAAACTGTCAAAATACTTGCAGGGAGTAGTTTTCCG...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAATGGTTGATTTTGCTCTaGAAATTGCTGGCTATCTCG +
Preference number: 4 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKWLILL*KLLAIS
Trigger: CGAGATAGCCAGCAATTTGCAGAGCAAAATCAACCA...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAATGAATGCTTTTCTCTaGGGAAAGTCTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLMNAFL*GKSCIL
Trigger: GAGGATGCAAGACTTTCCCCAGAGAAAAGCATTCAT...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATTGATGTCAATATCCTaGGCAAAATCAGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLLMSIS*AKSAAF
Trigger: GAAGGCTGCTGATTTTGCCCAGGATATTGACATCAA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCGGCCACACTGGCTTTCACATTCTaGAGTAAAGGTCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SMSLQSTENRMRPKCAATLAFTF*SKGLGR
Trigger: CCTCCCAAGACCTTTACTCCAGAATGTGAAAGCCAG...TGTGGCCGCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAATGCGAGGTAGAGAAGTaGGCAGTGGACATAGGATCC +
Preference number: 4 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKCEVEK*AVDIGS
Trigger: GGATCCTATGTCCACTGCTCACTTCTCTACCTCGCA...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp AATACACAAAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGGACAATCCAAGAATTaGGGTCTGACTTTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: NTQSKQNRVHSTHEGQPNGQSKN*GLTFLH
Trigger: GTGAAGAAAAGTCAGACCTCAATTCTTGGATTGTCC...ATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTTTGTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCTATGCTTTGCAATTTaGTATCACAGTGCTTACACT +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHLCFAI*YHSAYT
Trigger: AGTGTAAGCACTGTGATAGCAAATTGCAAAGCATAG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCTCTTGTTTGAAATCTaGAAAAGCACCATCTGCATA +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHLLFEI*KSTICI
Trigger: TATGCAGATGGTGCTTTTGCAGATTTCAAACAAGAG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCAAGTTGTGTCTGAATaGAGAAACAAAGGAGCAATA +
Preference number: 4 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHQVVSE*RNKGAI
Trigger: TATTGCTCCTTTGTTTCTGCATTCAGACACAACTTG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp AATACACAAAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATACACTTGATCTTTCATaGTTGCTGAAGAGCCGTAGT +
Preference number: 4 (lower is better)
Translates to: NTQSKQNRVHSTHEGQPNTLDLS*LLKSRS
Trigger: ACTACGGCTCTTCAGCAAGCATGAAAGATCAAGTGT...ATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTTTGTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAATGTAGGAGCAGTGTTTaGAGTAGTAAAGCTCAATAC +
Preference number: 4 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKCRSSV*SSKAQY
Trigger: GTATTGAGCTTTACTACTGCAAACACTGCTCCTACA...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAACGATCTCCGCCCCATTaGTGGCAGTGTAATCATGAG +
Preference number: 4 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKRSPPH*WQCNHE
Trigger: CTCATGATTACACTGCCACCAATGGGGCGGAGATCG...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAAGGACATTATTGTGCTTaGTCCGGTAGTGCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKGHYCA*SGSAWQ
Trigger: TTGCCAGGCACTACCGGATCAAGCACAATAATGTCC...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp TGTAAATTCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCAGTTCCTCGCTCAGCTaGGGAGAGTCATCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: CKFYVITVNRKQNASKMCSSSLS*GESSLG
Trigger: ACCCAAAGATGACTCTCCTCAGCTGAGCGAGGAACT...GCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGAATTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp TGTAAATTCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCCGTCACTGGAGCAGGTaGAGGTACACTTATCACAGC +
Preference number: 4 (lower is better)
Translates to: CKFYVITVNRKQNASKMCRHWSR*RYTYHS
Trigger: GCTGTGATAAGTGTACCTTCACCTGCTCCAGTGACG...GCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGAATTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAACCTTGCCCTCCGAGGTaGTTTGTATGTGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKPCPPR*FVCAKL
Trigger: CAGTTTTGCACATACAAATCACCTCGGAGGGCAAGG...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAAGTAAGGGGTCCAACATaGCTCCCGACTTTCTACCAT +
Preference number: 4 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKVRGPT*LPTFYH
Trigger: ATGGTAGAAAGTCGGGAGTCATGTTGGACCCCTTAC...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp TCACAGACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCACAAGTTGTCGCAGAATaGATGTTTGTGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SQTSSPGMKLFSTFEMRPQVVAE*MFVLLM
Trigger: CATCAGCAGCACAAACATTCATTCTGCGACAACTTG...TGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGTCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTACAAGTTGTGTCTGAATaGAGAAACAAAGGAGCAATA +
Preference number: 4 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLQVVSE*RNKGAI
Trigger: TATTGCTCCTTTGTTTCTGCATTCAGACACAACTTG...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAAGTTCCTCCGTGTGCTTaGTCTCATAGTAGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKVPPCA*SHSSRA
Trigger: AGCTCTGCTACTATGAGACCAAGCACACGGAGGAAC...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp TCACAGACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAAAAGTCTATCCCAATTaGCTCATCGTCTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SQTSSPGMKLFSTFEMRPKVYPN*LIVFLG
Trigger: GCCAAGGAAGACGATGAGCCAATTGGGATAGACTTT...TGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGTCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAAAGGTGGAGTTGGAGGTaGGGCTGGGTTCATTATCAT +
Preference number: 4 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKRWSWR*GWVHYH
Trigger: ATGATAATGAACCCAGCCCCACCTCCAACTCCACCT...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAAAGCACTGCCTACATTTaGGCGCTCGAAGTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKSTAYI*ALEVSF
Trigger: AAACGAAACTTCGAGCGCTCAAATGTAGGCAGTGCT...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp TGTAAATTCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCGGCACCTCTTCTAAGTaGCCAAAAGGCCTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: CKFYVITVNRKQNASKMCGTSSK*PKGLSC
Trigger: ACAAGAGAGGCCTTTTGGTCACTTAGAAGAGGTGCC...GCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGAATTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp TCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCGGCCACATTGTGGTACATCTTCTaGTGCTTAATTATCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SMSLQSTENRMRPKCAATLWYIF*CLIILA
Trigger: GGCAAGGATAATTAAGCATCAGAAGATGTACCACAA...TGTGGCCGCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR TCA 90 bp TCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCGGCCACAACTGGAATCTATTCATaGACCTTCGAAATGGAATCC +
Preference number: 4 (lower is better)
Translates to: SMSLQSTENRMRPKCAATTGIYS*TFEMES
Trigger: GGATTCCATTTCGAAGGTTCATGAATAGATTCCAGT...TGTGGCCGCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAACACTGTACACTGGTATaGGGTGGAAGATATAGCAGG +
Preference number: 4 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKHCTLV*GGRYSR
Trigger: CCTGCTATATCTTCCACCCCATACCAGTGTACAGTG...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAATTTGTAGACGGCACCTaGGTTGATGTCAATATCCTG +
Preference number: 4 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKFVDGT*VDVNIL
Trigger: CAGGATATTGACATCAACCCAGGTGCCGTCTACAAA...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp TCACAGACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCACTCTTGTTTGAAATCTaGAAAAGCACCATCTGCATA +
Preference number: 4 (lower is better)
Translates to: SQTSSPGMKLFSTFEMRPLLFEI*KSTICI
Trigger: TATGCAGATGGTGCTTTTGCAGATTTCAAACAAGAG...TGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGTCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR GCA 90 bp TGTAAATTCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCACTCACAACAAAAGTTaGCCCGAGACTTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: CKFYVITVNRKQNASKMCTHNKS*PETWSK
Trigger: CTTTGACCAAGTCTCGGGGCAACTTTTGTTGTGAGT...GCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGAATTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAAGAATGTTCCTTCAACTaGCTGATTGTCATGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKECSFN*LIVMVE
Trigger: TTCCACCATGACAATCAGCCAGTTGAAGGAACATTC...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CCA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAATTGTATGTGCAAAACTaGCAAGAAAAGACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKLYVQN*QEKTFP
Trigger: TGGAAAGGTCTTTTCTTGCCAGTTTTGCACATACAA...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp GGGGCCTGTGTGGGTGGCTGTGGCTGCTGGGTTGGTGGTGGCACCTaGTGTGGTGACTGCAGCGGTGGAGGTGGAGGCTGCGGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: GACVGGCGCWVGGGT*CGDCSGGGGGCGSG
Trigger: GCCACTGCCGCAGCCTCCACCTCCACCGCTGCAGTCACCACACCAGGTGCCACCACCAACCCAGCAGCCACAGCCACCCACACAGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 90 bp GGTGGTGGCACCTGGTGTGGTGACTGCAGCGGTGGAGGTGGAGGCTaGGGCAGTGGCTGTGATGGTGGTGGTGGTGGTGGTGGTAGTGGC +
Preference number: 5 (lower is better)
Translates to: GGGTWCGDCSGGGGG*GSGCDGGGGGGGSG
Trigger: GCCACTACCACCACCACCACCACCACCATCACAGCCACTGCCGCAGCCTCCACCTCCACCGCTGCAGTCACCACACCAGGTGCCACCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCTCTGCCGGCAGTTCCTaGCAGGGGTCCTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCSAGSS*QGSCSD
Trigger: GTCACTGCAGGACCCCTGCAAGGAACTGCCGGCAGA...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTGCTGTGGCTGCTGGGTaGGTGGTGGCACCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGAVAAG*VVAPGV
Trigger: CACACCAGGTGCCACCACCAACCCAGCAGCCACAGC...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTGGGCTAACGCGGCTCTaGTTTCTTGCCAGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGGLTRL*FLARAA
Trigger: AGCCGCCCTGGCAAGAAACAAGAGCCGCGTTAGCCC...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCGGCTCATCGTCTTCCTaGGCCTCTATGGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCGSSSS*ASMEGS
Trigger: GCTGCCCTCCATAGAGGCCAAGGAAGACGATGAGCC...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCCTCCTCTCCTGGCGTTaGGCACGCTTCTGGAATTCC +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCLLSWR*ARFWNS
Trigger: GGAATTCCAGAAGCGTGCCAAACGCCAGGAGAGGAG...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCCAGGACCCGGTCACATaGACTGCAATGGTATCCCCC +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCQDPVT*TAMVSP
Trigger: GGGGGATACCATTGCAGTCAATGTGACCGGGTCCTG...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCCTCATTTCGTCGTCCTaGTCCTCGTCCTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCLISSS*SSSSLL
Trigger: CAGCAGCGAGGACGAGGACAAGGACGACGAAATGAG...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 90 bp GAGTGGCCTTCTGGGAGGAGGGGTGAGCATGTGAGGAGAGGAGACTaGCAATCCGTGGCCGGGGAAGGGTCAGGGCTTTGCCATGGACCT +
Preference number: 5 (lower is better)
Translates to: EWPSGRRGEHVRRGD*QSVAGEGSGLCHGP
Trigger: AGGTCCATGGCAAAGCCCTGACCCTTCCCCGGCCACGGATTGTCAGTCTCCTCTCCTCACATGCTCACCCCTCCTCCCAGAAGGCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp ATGCTGCGCTCAACAACCTCTGCCGGCAGTTCCTTGCAGGGGTCCTaGAGTGACACAGGTGGAACCAGAGGGTCTGGCAGTGGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: MLRSTTSAGSSLQGS*SDTGGTRGSGSGAG
Trigger: CCCTGCTCCACTGCCAGACCCTCTGGTTCCACCTGTGTCACTGCAGGACCCCTGCAAGGAACTGCCGGCAGAGGTTGTTGAGCGCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp CGCTCCATACCGGAAGCAGGGAGAAGCACACAGCTGGCAGGCTTCTaGTTCCGGTCACAGAGGCTTCGGATGGTGGCTGTGTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: RSIPEAGRSTQLAGF*FRSQRLRMVAVCCL
Trigger: CAGGCAGCACACAGCCACCATCCGAAGCCTCTGTGACCGGAACCAGAAGCCTGCCAGCTGTGTGCTTCTCCCTGCTTCCGGTATGGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCACATCGGCATTGGCCTaGAAGTCCCGGTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCTSALA*KSRCFF
Trigger: GAAGAAGCACCGGGACTTCAAGGCCAATGCCGATGT...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCTCTCTGGGGAAAGTCTaGCATCCTCTGGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCSLGKV*HPLGTQ
Trigger: CTGAGTGCCCAGAGGATGCAAGACTTTCCCCAGAGA...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGTGGCATGCTGCTTCTTaGGGAACACCCCCGGGTGGC +
Preference number: 5 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEWHAAS*GTPPGG
Trigger: GCCACCCGGGGGTGTTCCCAAAGAAGCAGCATGCCA...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTGAGCCACTCGATGTCTaGAGCTTCGCCTTCCACCTC +
Preference number: 5 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGEPLDV*SFAFHL
Trigger: GAGGTGGAAGGCGAAGCTCAAGACATCGAGTGGCTC...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 90 bp GAGTCTTCCACTTCTTCGGCTGGAGTGGCCTTCTGGGAGGAGGGGTaGGCATGTGAGGAGAGGAGACTGACAATCCGTGGCCGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: ESSTSSAGVAFWEEG*ACEERRLTIRGRGR
Trigger: CCTTCCCCGGCCACGGATTGTCAGTCTCCTCTCCTCACATGCTCACCCCTCCTCCCAGAAGGCCACTCCAGCCGAAGAAGTGGAAGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 90 bp ACCACCGCGAGCCACAGGCGTGGACGTCGCCATGCTCTTGGGAGCTaGATTCAAAATCTCCCGCAGGGTCTGGGACTCAGCATTCAGCCC +
Preference number: 5 (lower is better)
Translates to: TTASHRRGRRHALGS*IQNLPQGLGLSIQP
Trigger: GGGCTGAATGCTGAGTCCCAGACCCTGCGGGAGATTTTGAATTCAGCTCCCAAGAGCATGGCGACGTCCACGCCTGTGGCTCGCGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 90 bp GGTGGTGGTGGTGGTGGTGGTAGTGGCGGAGGTGGCTGTGGTGGCTaGTGCTGCTGTAAGGGGTCCAACATGACTCCCGACTTTCTACCA +
Preference number: 5 (lower is better)
Translates to: GGGGGGGSGGGGCGG*CCCKGSNMTPDFLP
Trigger: TGGTAGAAAGTCGGGAGTCATGTTGGACCCCTTACAGCAGCAGCAGCCACCACAGCCACCTCCGCCACTACCACCACCACCACCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp TTGGGCTCCTTCTGGGCCTCACTAGCGTCTCTGGCCCAGATCTGTTaGGCTGAAAAGGCAGTGGGCACCTCCATGATGGGGTCCGTTGCC +
Preference number: 5 (lower is better)
Translates to: LGSFWASLASLAQIC*AEKAVGTSMMGSVA
Trigger: GGCAACGGACCCCATCATGGAGGTGCCCACTGCCTTTTCAGCCCAACAGATCTGGGCCAGAGACGCTAGTGAGGCCCAGAAGGAGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp GCAAGCCACCACCGCGAGCCACAGGCGTGGACGTCGCCATGCTCTTaGGAGCTGAATTCAAAATCTCCCGCAGGGTCTGGGACTCAGCAT +
Preference number: 5 (lower is better)
Translates to: ASHHREPQAWTSPCS*ELNSKSPAGSGTQH
Trigger: ATGCTGAGTCCCAGACCCTGCGGGAGATTTTGAATTCAGCTCCCAAGAGCATGGCGACGTCCACGCCTGTGGCTCGCGGTGGTGGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp CGCAGCCCCTTCACAGCAGCCGACACAGCCGGGACGCTACCATACTaGACATGTTTCCGGAGGTGGTTACAGATGGCCCGAAGCGTTGGA +
Preference number: 5 (lower is better)
Translates to: RSPFTAADTAGTLPY*TCFRRWLQMARSVG
Trigger: TCCAACGCTTCGGGCCATCTGTAACCACCTCCGGAAACATGTCCAGTATGGTAGCGTCCCGGCTGTGTCGGCTGCTGTGAAGGGGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTACATCGGCATTGGCCTaGAAGTCCCGGTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGTSALA*KSRCFF
Trigger: GAAGAAGCACCGGGACTTCAAGGCCAATGCCGATGT...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCGCTCGAAGTTTCGTTTaGTCCCGCTCCATACCGGAA +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCARSFV*SRSIPE
Trigger: TTCCGGTATGGAGCGGGACAAAACGAAACTTCGAGC...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTTGAAGAGATTGTTTTaGCCCTCGGGCTGGGCACGG +
Preference number: 5 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGLKRLF*PSGWAR
Trigger: CCGTGCCCAGCCCGAGGGCAAAAACAATCTCTTCAA...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCATCACCTTGTTGGGCTaGTCACTGATGGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCITLLG*SLMVLE
Trigger: CTCCAGGACCATCAGTGACAAGCCCAACAAGGTGAT...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCGGGATGATCACCTTGTaGGGCTTGTCACTGATGGTC +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCGMITL*GLSLMV
Trigger: GACCATCAGTGACAAGCCCAACAAGGTGATCATCCC...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCGCGGCTCTTGTTTCTaGCCAGGGCGGCTGACTGGT +
Preference number: 5 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVRGSCF*PGRLTG
Trigger: ACCAGTCAGCCGCCCTGGCAAGAAACAAGAGCCGCG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp GCAGGCTTCTGGTTCCGGTCACAGAGGCTTCGGATGGTGGCTGTGTaGTGCCTGATCACATCGGCATTGGCCTTGAAGTCCCGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: AGFWFRSQRLRMVAV*CLITSALALKSRCF
Trigger: GAAGCACCGGGACTTCAAGGCCAATGCCGATGTGATCAGGCAGCACACAGCCACCATCCGAAGCCTCTGTGACCGGAACCAGAAGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp TCGTTTTGTCCCGCTCCATACCGGAAGCAGGGAGAAGCACACAGCTaGCAGGCTTCTGGTTCCGGTCACAGAGGCTTCGGATGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SFCPAPYRKQGEAHS*QASGSGHRGFGWWL
Trigger: CAGCCACCATCCGAAGCCTCTGTGACCGGAACCAGAAGCCTGCCAGCTGTGTGCTTCTCCCTGCTTCCGGTATGGAGCGGGACAAAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp AACTACACATGGTGCACTTGTAAGGGTGCAAAGGTGGGGCCTGTGTaGGTGGCTGTGGCTGCTGGGTTGGTGGTGGCACCTGGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: NYTWCTCKGAKVGPV*VAVAAGLVVAPGVV
Trigger: CACCACACCAGGTGCCACCACCAACCCAGCAGCCACAGCCACCCACACAGGCCCCACCTTTGCACCCTTACAAGTGCACCATGTGTAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp TCAGAACTGTTCAGCTGCAAGGGAGCAGGAGGCCGAGGGGAATCTTaGAGCCCTTCAGCCCCTCTCATCATTGCAGCTGTGGGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: SELFSCKGAGGRGES*SPSAPLIIAAVGGA
Trigger: GGCTCCTCCCACAGCTGCAATGATGAGAGGGGCTGAAGGGCTCCAAGATTCCCCTCGGCCTCCTGCTCCCTTGCAGCTGAACAGTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAAGGCCGAGGGGAATCTaGGAGCCCTTCAGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSRPRGI*EPFSPS
Trigger: AGAGGGGCTGAAGGGCTCCAAGATTCCCCTCGGCCT...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCGCAGGGTGGTCTTTCTaGATATGCTTCCTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCAGWSF*ICFLSA
Trigger: TGCACTGAGGAAGCATATCAAGAAAGACCACCCTGC...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTCCAGGGGTGGAACGCTaGGTAATGGTTTGTGATGTC +
Preference number: 5 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGPGVER*VMVCDV
Trigger: GACATCACAAACCATTACCAAGCGTTCCACCCCTGG...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGTCCTCAGCGGTCACCTaGATGGCCGGGTGTCGCTTC +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVRESSAVT*MAGCRF
Trigger: GAAGCGACACCCGGCCATCAAGGTGACCGCTGAGGA...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCGCACACAGGGCACACTaGAAGAGATTGTTTTTGCCC +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCAHRAH*KRLFLP
Trigger: GGGCAAAAACAATCTCTTCAAGTGTGCCCTGTGTGC...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCGCTTTGCCATGGACCTaGAGGGAATGTTCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCALPWT*RECSFN
Trigger: GTTGAAGGAACATTCCCTCAAGGTCCATGGCAAAGC...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGGCTAACGCGGCTCTaGTTTCTTGCCAGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVREGLTRL*FLARAA
Trigger: AGCCGCCCTGGCAAGAAACAAGAGCCGCGTTAGCCC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp GGCTTCTGGTTCCGGTCACAGAGGCTTCGGATGGTGGCTGTGTGCTaGCTGATCACATCGGCATTGGCCTTGAAGTCCCGGTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GFWFRSQRLRMVAVC*LITSALALKSRCFF
Trigger: GAAGAAGCACCGGGACTTCAAGGCCAATGCCGATGTGATCAGGCAGCACACAGCCACCATCCGAAGCCTCTGTGACCGGAACCAGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp TTGCATCAAGCAAGCAGTGTCCACCATCCACCCGGCCCACCAGTGTaGCACTGGCGTCTCTGGCTGCTTCCAATCCATCCAGGAACAGGT +
Preference number: 5 (lower is better)
Translates to: LHQASSVHHPPGPPV*HWRLWLLPIHPGTG
Trigger: ACCTGTTCCTGGATGGATTGGAAGCAGCCAGAGACGCCAGTGGCACACTGGTGGGCCGGGTGGATGGTGGACACTGCTTGCTTGATGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS GCA 90 bp CAGGCCCCCGGTCTGCAAATCTCATCAGCTCTCTGTCCTCAGCCTTaGTGCTCATTTCGTCGTCCTTGTCCTCGTCCTCGCTGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: QAPGLQISSALCPQP*CSFRRPCPRPRCWN
Trigger: GTTCCAGCAGCGAGGACGAGGACAAGGACGACGAAATGAGCAGCAAGGCTGAGGACAGAGAGCTGATGAGATTTGCAGACCGGGGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCTGATCACATCGGCATaGGCCTTGAAGTCCCGGTGC +
Preference number: 5 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVLITSA*ALKSRC
Trigger: GCACCGGGACTTCAAGGCCAATGCCGATGTGATCAG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGTCTCTGGGGAAAGTCTaGCATCCTCTGGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: SSVSGSLGFHTLSERVTESLGKV*HPLGTQ
Trigger: CTGAGTGCCCAGAGGATGCAAGACTTTCCCCAGAGA...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGAGGAGGCCGTGCAAGTaGTTGTACTCGGACTGGCAC +
Preference number: 5 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTRRPCK*LYSDWH
Trigger: GTGCCAGTCCGAGTACAACAACTTGCACGGCCTCCT...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCGACACAATGCCTTTCTaGCTGAAGGACTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCDTMPF*LKDWKE
Trigger: TTCCTTCCAGTCCTTCAGCAAGAAAGGCATTGTGTC...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGGACAGCTTGAAGCATTaGATGCAGCGGAACGGGAGC +
Preference number: 5 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEDSLKH*MQRNGS
Trigger: GCTCCCGTTCCGCTGCATCAAATGCTTCAAGCTGTC...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGCTCCTCTCCTGGCGTTaGGCACGCTTCTGGAATTCC +
Preference number: 5 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTLLSWR*ARFWNS
Trigger: GGAATTCCAGAAGCGTGCCAAACGCCAGGAGAGGAG...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCTACTGGCAGCTGTACTaGTCCTCTCTGGTAAACATG +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCYWQLY*SSLVNM
Trigger: CATGTTTACCAGAGAGGACAAGTACAGCTGCCAGTA...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTGCTTTGCCATGGACCTaGAGGGAATGTTCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGALPWT*RECSFN
Trigger: GTTGAAGGAACATTCCCTCAAGGTCCATGGCAAAGC...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCGGAAGGGTCAGGGCTTaGCCATGGACCTTGAGGGAA +
Preference number: 5 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVGRVRA*PWTLRE
Trigger: TTCCCTCAAGGTCCATGGCAAAGCCCTGACCCTTCC...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCTCATTTCGTCGTCCTaGTCCTCGTCCTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVLISSS*SSSSLL
Trigger: CAGCAGCGAGGACGAGGACAAGGACGACGAAATGAG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp ATCTCAGTCTCCACAGGAGGGCAATCTCTCTCAGAACTGTTCAGCTaGAAGGGAGCAGGAGGCCGAGGGGAATCTTGGAGCCCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: ISVSTGGQSLSELFS*KGAGGRGESWSPSA
Trigger: GGCTGAAGGGCTCCAAGATTCCCCTCGGCCTCCTGCTCCCTTGCAGCTGAACAGTTCTGAGAGAGATTGCCCTCCTGTGGAGACTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp CCGGAGTTCCTCGCTCAGCTGAGGAGAGTCATCTTTGGGTGGGGATaGGATGATCACCTTGTTGGGCTTGTCACTGATGGTCCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: PEFLAQLRRVIFGWG*DDHLVGLVTDGPGG
Trigger: GCCTCCAGGACCATCAGTGACAAGCCCAACAAGGTGATCATCCCATCCCCACCCAAAGATGACTCTCCTCAGCTGAGCGAGGAACTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp AGCCCGCCGGAGTTCCTCGCTCAGCTGAGGAGAGTCATCTTTGGGTaGGGATGGGATGATCACCTTGTTGGGCTTGTCACTGATGGTCCT +
Preference number: 5 (lower is better)
Translates to: SPPEFLAQLRRVIFG*GWDDHLVGLVTDGP
Trigger: AGGACCATCAGTGACAAGCCCAACAAGGTGATCATCCCATCCCCACCCAAAGATGACTCTCCTCAGCTGAGCGAGGAACTCCGGCGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp GCCGACACAGCCGGGACGCTACCATACTGGACATGTTTCCGGAGGTaGTTACAGATGGCCCGAAGCGTTGGATGCACTTCCACGCAGAAT +
Preference number: 5 (lower is better)
Translates to: ADTAGTLPYWTCFRR*LQMARSVGCTSTQN
Trigger: ATTCTGCGTGGAAGTGCATCCAACGCTTCGGGCCATCTGTAACCACCTCCGGAAACATGTCCAGTATGGTAGCGTCCCGGCTGTGTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp GTTTGTATTTGGTGTGATAGAGGCAGAGAGGACAGCGGAGATCTTTaGGGCCTTCCTCCGGGACCGCCGAATGCCCAGCTTCCACGTGCA +
Preference number: 5 (lower is better)
Translates to: VCIWCDRGREDSGDL*GLPPGPPNAQLPRA
Trigger: TGCACGTGGAAGCTGGGCATTCGGCGGTCCCGGAGGAAGGCCCCAAAGATCTCCGCTGTCCTCTCTGCCTCTATCACACCAAATACAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCTGATCACATCGGCATaGGCCTTGAAGTCCCGGTGC +
Preference number: 5 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVLITSA*ALKSRC
Trigger: GCACCGGGACTTCAAGGCCAATGCCGATGTGATCAG...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGGCACACTTGAAGAGATaGTTTTTGCCCTCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEAHLKR*FLPSGW
Trigger: CCAGCCCGAGGGCAAAAACAATCTCTTCAAGTGTGC...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGAGCCACTCGATGTCTaGAGCTTCGCCTTCCACCTC +
Preference number: 5 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSEPLDV*SFAFHL
Trigger: GAGGTGGAAGGCGAAGCTCAAGACATCGAGTGGCTC...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAAGATGGCCCGAAGCGTaGGATGCACTTCCACGCAGA +
Preference number: 5 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSRWPEA*DALPRR
Trigger: TCTGCGTGGAAGTGCATCCAACGCTTCGGGCCATCT...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCAGATGGCCCGAAGCGTaGGATGCACTTCCACGCAGA +
Preference number: 5 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVRWPEA*DALPRR
Trigger: TCTGCGTGGAAGTGCATCCAACGCTTCGGGCCATCT...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGAAGGGTCAGGGCTTaGCCATGGACCTTGAGGGAA +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVREGRVRA*PWTLRE
Trigger: TTCCCTCAAGGTCCATGGCAAAGCCCTGACCCTTCC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTCTCCCTGCAAGTATTTaGACAGTTTGGAACGGCACA +
Preference number: 5 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGLPASI*TVWNGT
Trigger: TGTGCCGTTCCAAACTGTCAAAATACTTGCAGGGAG...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGCTCATTTCGTCGTCCTaGTCCTCGTCCTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVRELISSS*SSSSLL
Trigger: CAGCAGCGAGGACGAGGACAAGGACGACGAAATGAG...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTACATTTTGGGAGACATaGGAGCACCCACCTCAAATG +
Preference number: 5 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGTFWET*EHPPQM
Trigger: CATTTGAGGTGGGTGCTCCAATGTCTCCCAAAATGT...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 90 bp AGCTTGAAGCATTTGATGCAGCGGAACGGGAGCCACTCGATGTCTTaGGCTTCGCCTTCCACCTCGGCCCTCTCAAAGCTGCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: SLKHLMQRNGSHSMS*ASPSTSALSKLLLS
Trigger: GGAGAGAAGCAGCTTTGAGAGGGCCGAGGTGGAAGGCGAAGCTCAAGACATCGAGTGGCTCCCGTTCCGCTGCATCAAATGCTTCAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp CTTGTCACTGATGGTCCTGGAGGCCGCAAGGCAGTGGGTGTAATATaGATCAATGTCGTGGCGCTTCTGGTAGTGGGCTGCCAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: LVTDGPGGRKAVGVI*INVVALLVVGCQSL
Trigger: AAGGGACTGGCAGCCCACTACCAGAAGCGCCACGACATTGATGCATATTACACCCACTGCCTTGCGGCCTCCAGGACCATCAGTGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp AGAGGACAGCGGAGATCTTTGGGGCCTTCCTCCGGGACCGCCGAATaGCCAGCTTCCACGTGCATAGTAAAAGCAGATTTAAAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: RGQRRSLGPSSGTAE*PASTCIVKADLKPV
Trigger: CACCGGCTTTAAATCTGCTTTTACTATGCACGTGGAAGCTGGGCATTCGGCGGTCCCGGAGGAAGGCCCCAAAGATCTCCGCTGTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTCTGATCACATCGGCATaGGCCTTGAAGTCCCGGTGC +
Preference number: 5 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFLITSA*ALKSRC
Trigger: GCACCGGGACTTCAAGGCCAATGCCGATGTGATCAG...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCCAGGGGTGGAACGCTaGGTAATGGTTTGTGATGTC +
Preference number: 5 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVPGVER*VMVCDV
Trigger: GACATCACAAACCATTACCAAGCGTTCCACCCCTGG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCAGGCCGTGCAAGTTGTaGTACTCGGACTGGCACACT +
Preference number: 5 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVRPCKL*YSDWHT
Trigger: AGTGTGCCAGTCCGAGTACAACAACTTGCACGGCCT...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGTGGAACAGAAGTACTaGCAGAGCTGGCACCGGAAC +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVREVEQKY*QSWHRN
Trigger: GTTCCGGTGCCAGCTCTGCAAGTACTTCTGTTCCAC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCGACAGCTTGAAGCATTaGATGCAGCGGAACGGGAGC +
Preference number: 5 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVDSLKH*MQRNGS
Trigger: GCTCCCGTTCCGCTGCATCAAATGCTTCAAGCTGTC...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCTCTGCATATTTCTGCTaGCTCAAAAGCTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCSAYFC*LKSCFL
Trigger: GAGGAAACAGCTTTTGAGCAAGCAGAAATATGCAGA...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGACCACCGTGCATATGGCGATCCAAGTaGTGTCTGAATGCAGAAACA +
Preference number: 5 (lower is better)
Translates to: PGASVSTHCPRGSRRPPCIWRSK*CLNAET
Trigger: TGTTTCTGCATTCAGACACAACTTGGATCGCCATAT...GCACGGTGGTCTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGCCTCCACCATCTCCTTaGTATGGATTTCGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEPPPSP*YGFRSC
Trigger: GCAGGAACGAAATCCATACAAAGGAGATGGTGGAGG...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGTCCTCCAGGAGAGATTaGTCGGCAGCCACTACACAG +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVRESSRRD*SAATTQ
Trigger: CTGTGTAGTGGCTGCCGACAAATCTCTCCTGGAGGA...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCATCCTCCAGGAGAGATTaGTCGGCAGCCACTACACAG +
Preference number: 5 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSSSRRD*SAATTQ
Trigger: CTGTGTAGTGGCTGCCGACAAATCTCTCCTGGAGGA...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCGGGACTCTCTTCAGCTaGAGCTCCATGGACCTTCCT +
Preference number: 5 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVGTLFS*SSMDLP
Trigger: AGGAAGGTCCATGGAGCTCAAGCTGAAGAGAGTCCC...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGTTGGTCTCTAACAGCTaGTTGCCATCAGAGCCCATG +
Preference number: 5 (lower is better)
Translates to: SSVSGSLGFHTLSERVTELVSNS*LPSEPM
Trigger: CATGGGCTCTGATGGCAACAAGCTGTTAGAGACCAA...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCGTGGGATGCATTCTTaGGTAATGCGGCATCAGGCT +
Preference number: 5 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVRGMHS*VMRHQA
Trigger: AGCCTGATGCCGCATTACCAAAGAATGCATCCCACG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCCCATGTTGGACATTTaGGGAGACATTGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVPMLDI*GDIGAP
Trigger: GGGTGCTCCAATGTCTCCCAAAATGTCCAACATGGG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 90 bp GAGCACTTTTTCTTCTCCACAGCCCGCCGGAGTTCCTCGCTCAGCTaGGGAGAGTCATCTTTGGGTGGGGATGGGATGATCACCTTGTTG +
Preference number: 5 (lower is better)
Translates to: EHFFFSTARRSSSLS*GESSLGGDGMITLL
Trigger: CAACAAGGTGATCATCCCATCCCCACCCAAAGATGACTCTCCTCAGCTGAGCGAGGAACTCCGGCGGGCTGTGGAGAAGAAAAAGTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 90 bp TACACTGGAAGGTGGAGTTCTGGAAGCGGGGGCCGCTGCCTAGGATaGCGAAGTCCCTCTTTAAGTCCCTGCTGTGGTGGTCTGTGTAAT +
Preference number: 5 (lower is better)
Translates to: YTGRWSSGSGGRCLG*RSPSLSPCCGGLCN
Trigger: ATTACACAGACCACCACAGCAGGGACTTAAAGAGGGACTTCGTCATCCTAGGCAGCGGCCCCCGCTTCCAGAACTCCACCTTCCAGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp TCCTCCACGTCATTCTGGGATATGTCAGCAGACTGCTCCACATCATaGACAAAGTCCTCAGCGGTCACCTTGATGGCCGGGTGTCGCTTC +
Preference number: 5 (lower is better)
Translates to: SSTSFWDMSADCSTS*TKSSAVTLMAGCRF
Trigger: GAAGCGACACCCGGCCATCAAGGTGACCGCTGAGGACTTTGTGCATGATGTGGAGCAGTCTGCTGACATATCCCAGAATGACGTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp GTAGCCAGAGGAGAATTCACAGAATTCGCAGTGAAGAACGGCTTCTaGCTTCTGTTCCGTGCCAGCAGCAGTCCCAGAAGGAGGCACAGG +
Preference number: 5 (lower is better)
Translates to: VARGEFTEFAVKNGF*LLFRASSSPRRRHR
Trigger: CCTGTGCCTCCTTCTGGGACTGCTGCTGGCACGGAACAGAAGGCAGAAGCCGTTCTTCACTGCGAATTCTGTGAATTCTCCTCTGGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp AGGAGGCCGAGGGGAATCTTGGAGCCCTTCAGCCCCTCTCATCATTaGAGCTGTGGGAGGAGCCTGTCTGATATATTTGGCAGTGACCTT +
Preference number: 5 (lower is better)
Translates to: RRPRGILEPFSPSHH*SCGRSLSDIFGSDL
Trigger: AAGGTCACTGCCAAATATATCAGACAGGCTCCTCCCACAGCTGCAATGATGAGAGGGGCTGAAGGGCTCCAAGATTCCCCTCGGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp AGGAGACTGACAATCCGTGGCCGGGGAAGGGTCAGGGCTTTGCCATaGACCTTGAGGGAATGTTCCTTCAACTGGCTGATTGTCATGGTG +
Preference number: 5 (lower is better)
Translates to: RRLTIRGRGRVRALP*TLRECSFNWLIVMV
Trigger: CACCATGACAATCAGCCAGTTGAAGGAACATTCCCTCAAGGTCCATGGCAAAGCCCTGACCCTTCCCCGGCCACGGATTGTCAGTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp TGGGCATCTCCCGGCTCGCAGCATTCATGGACAGGTAGGTGGAGTTaGAGGTGGGGCTGGGTTCATTATCATTCTGCGCTTCAGAGACAT +
Preference number: 5 (lower is better)
Translates to: WASPGSQHSWTGRWS*RWGWVHYHSALQRH
Trigger: ATGTCTCTGAAGCGCAGAATGATAATGAACCCAGCCCCACCTCCAACTCCACCTACCTGTCCATGAATGCTGCGAGCCGGGAGATGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp TTCTGGAGTAAAGGTCTTGGGAGGAGTGTTTTTGTTAAACGTAGCTaGCAAGCCACCACCGCGAGCCACAGGCGTGGACGTCGCCATGCT +
Preference number: 5 (lower is better)
Translates to: FWSKGLGRSVFVKRS*QATTASHRRGRRHA
Trigger: AGCATGGCGACGTCCACGCCTGTGGCTCGCGGTGGTGGCTTGCCAGCTACGTTTAACAAAAACACTCCTCCCAAGACCTTTACTCCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGCACTGCCTACATTaGAGCGCTCGAAGTTTCGTT +
Preference number: 5 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTEHCLH*SARSFV
Trigger: AACGAAACTTCGAGCGCTCAAATGTAGGCAGTGCTC...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCGAGCACTGCCTACATTaGAGCGCTCGAAGTTTCGTT +
Preference number: 5 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVEHCLH*SARSFV
Trigger: AACGAAACTTCGAGCGCTCAAATGTAGGCAGTGCTC...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCGCAGGGTGGTCTTTCTaGATATGCTTCCTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVAGWSF*ICFLSA
Trigger: TGCACTGAGGAAGCATATCAAGAAAGACCACCCTGC...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGATCACCTTGTTGGGCTaGTCACTGATGGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVREITLLG*SLMVLE
Trigger: CTCCAGGACCATCAGTGACAAGCCCAACAAGGTGAT...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGGATGATCACCTTGTaGGGCTTGTCACTGATGGTC +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVREGMITL*GLSLMV
Trigger: GACCATCAGTGACAAGCCCAACAAGGTGATCATCCC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGGGATGATCACCTTGTaGGGCTTGTCACTGATGGTC +
Preference number: 5 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSGMITL*GLSLMV
Trigger: GACCATCAGTGACAAGCCCAACAAGGTGATCATCCC...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGATGGGATGATCACCTaGTTGGGCTTGTCACTGATG +
Preference number: 5 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTDGMIT*LGLSLM
Trigger: CATCAGTGACAAGCCCAACAAGGTGATCATCCCATC...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTGACAGCTTGAAGCATTaGATGCAGCGGAACGGGAGC +
Preference number: 5 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFDSLKH*MQRNGS
Trigger: GCTCCCGTTCCGCTGCATCAAATGCTTCAAGCTGTC...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGTGCTGAAGGACAGCTaGAAGCATTTGATGCAGCGG +
Preference number: 5 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSVLKDS*KHLMQR
Trigger: CCGCTGCATCAAATGCTTCAAGCTGTCCTTCAGCAC...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCTCACCAGCATGGGCTTaGAGGATGTGTGTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVSPAWA*RMCVFN
Trigger: GTTGAAGACACACATCCTCAAAGCCCATGCTGGTGA...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGCCTCCACCATCTCCTTaGTATGGATTTCGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTPPPSP*YGFRSC
Trigger: GCAGGAACGAAATCCATACAAAGGAGATGGTGGAGG...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAAGTTGCCCCGAGACTaGGTCAAAGGCTTGACCATA +
Preference number: 5 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVKLPRD*VKGLTI
Trigger: TATGGTCAAGCCTTTGACCAAGTCTCGGGGCAACTT...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 90 bp ATGGAATCCCCTTGGTCTCTAACAGCTTGTTGCCATCAGAGCCCATaGGCTGCTCTGCAGACAGTCCTGACGCCTGGTGATCCAGAACAC +
Preference number: 5 (lower is better)
Translates to: MESPWSLTACCHQSP*AALQTVLTPGDPEH
Trigger: GTGTTCTGGATCACCAGGCGTCAGGACTGTCTGCAGAGCAGCTCATGGGCTCTGATGGCAACAAGCTGTTAGAGACCAAGGGGATTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 90 bp AAGTGTGAGGTCAGCTCGGCTATGCTTTGCAATTTGCTATCACAGTaGTTACACTGGAAGGTGGAGTTCTGGAAGCGGGGGCCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: KCEVSSAMLCNLLSQ*LHWKVEFWKRGPLP
Trigger: AGGCAGCGGCCCCCGCTTCCAGAACTCCACCTTCCAGTGTAAGCACTGTGATAGCAAATTGCAAAGCATAGCCGAGCTGACCTCACACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTAGGCCGAGGGGAATCTaGGAGCCCTTCAGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIRPRGI*EPFSPS
Trigger: AGAGGGGCTGAAGGGCTCCAAGATTCCCCTCGGCCT...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATAGGCCGAGGGGAATCTaGGAGCCCTTCAGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHRPRGI*EPFSPS
Trigger: AGAGGGGCTGAAGGGCTCCAAGATTCCCCTCGGCCT...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTGCTCGAAGTTTCGTTTaGTCCCGCTCCATACCGGAA +
Preference number: 5 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFARSFV*SRSIPE
Trigger: TTCCGGTATGGAGCGGGACAAAACGAAACTTCGAGC...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGCAGGGTGGTCTTTCTaGATATGCTTCCTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVREAGWSF*ICFLSA
Trigger: TGCACTGAGGAAGCATATCAAGAAAGACCACCCTGC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTGTAGGCACCATACCCTaGTTTAAAAATCCTACTTGT +
Preference number: 5 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGVGTIP*FKNPTC
Trigger: ACAAGTAGGATTTTTAAACAAGGGTATGGTGCCTAC...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGCACACAGGGCACACTaGAAGAGATTGTTTTTGCCC +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVREAHRAH*KRLFLP
Trigger: GGGCAAAAACAATCTCTTCAAGTGTGCCCTGTGTGC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGATGGGATGATCACCTaGTTGGGCTTGTCACTGATG +
Preference number: 5 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSDGMIT*LGLSLM
Trigger: CATCAGTGACAAGCCCAACAAGGTGATCATCCCATC...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCGACACAATGCCTTTCTaGCTGAAGGACTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVDTMPF*LKDWKE
Trigger: TTCCTTCCAGTCCTTCAGCAAGAAAGGCATTGTGTC...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTGGCATGCTGCTTCTTaGGGAACACCCCCGGGTGGC +
Preference number: 5 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHWHAAS*GTPPGG
Trigger: GCCACCCGGGGGTGTTCCCAAAGAAGCAGCATGCCA...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCGCGGCTCTTGTTTCTaGCCAGGGCGGCTGACTGGT +
Preference number: 5 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHRGSCF*PGRLTG
Trigger: ACCAGTCAGCCGCCCTGGCAAGAAACAAGAGCCGCG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTGGGCTAACGCGGCTCTaGTTTCTTGCCAGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIGLTRL*FLARAA
Trigger: AGCCGCCCTGGCAAGAAACAAGAGCCGCGTTAGCCC...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCTGTCCCCTCCCTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTAAGTATTTTGACAGTTaGGAACGGCACACTTCAATG +
Preference number: 5 (lower is better)
Translates to: VCPLPSQPTPARPHFHHGKYFDS*ERHTSM
Trigger: CATTGAAGTGTGCCGTTCCAAACTGTCAAAATACTT...ACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAGGGAGGGGACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACCTCCACCATCTCCTTaGTATGGATTTCGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSPPPSP*YGFRSC
Trigger: GCAGGAACGAAATCCATACAAAGGAGATGGTGGAGG...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCTTTTCTTCACAGTGTaGCTGGAAGAGGGGTGGCTA +
Preference number: 5 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVLFFTV*LEEGWL
Trigger: TAGCCACCCCTCTTCCAGCAACACTGTGAAGAAAAG...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 90 bp CATCACCATTCATGGCCCAGGGGTGGAACGCTTGGTAATGGTTTGTaGTGTCCCAGATGGAGACGGCTTCAAAAACGCAGTCCCTGCATC +
Preference number: 5 (lower is better)
Translates to: HHHSWPRGGTLGNGL*CPRWRRLQKRSPCI
Trigger: GATGCAGGGACTGCGTTTTTGAAGCCGTCTCCATCTGGGACATCACAAACCATTACCAAGCGTTCCACCCCTGGGCCATGAATGGTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 90 bp CAGCAGCCTTCACTTTCATACCAGGATGCTTCTTCCCGTAATGGGTaGGGAGGCCGTGCAAGTTGTTGTACTCGGACTGGCACACTGTAC +
Preference number: 5 (lower is better)
Translates to: QQPSLSYQDASSRNG*GGRASCCTRTGTLY
Trigger: GTACAGTGTGCCAGTCCGAGTACAACAACTTGCACGGCCTCCTCACCCATTACGGGAAGAAGCATCCTGGTATGAAAGTGAAGGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp ACTCGATGTCTTGAGCTTCGCCTTCCACCTCGGCCCTCTCAAAGCTaGTTCTCTCCTCTTCTTCCATCAGTGGGGGTTTCTCGTGTTCAT +
Preference number: 5 (lower is better)
Translates to: TRCLELRLPPRPSQS*FSPLLPSVGVSRVH
Trigger: ATGAACACGAGAAACCCCCACTGATGGAAGAAGAGGAGAGAAGCAGCTTTGAGAGGGCCGAGGTGGAAGGCGAAGCTCAAGACATCGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp CATAATGCTCAGGGTGTCTCCTCTGATAATGCAGGAGCAAACCACTaGGCTCCATGTGGGAGTAGATACACCACTCGCAGTGGTAGCCAG +
Preference number: 5 (lower is better)
Translates to: HNAQGVSSDNAGANH*APCGSRYTTRSGSQ
Trigger: CTGGCTACCACTGCGAGTGGTGTATCTACTCCCACATGGAGCCCAGTGGTTTGCTCCTGCATTATCAGAGGAGACACCCTGAGCATTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp CCGGGACGCTACCATACTGGACATGTTTCCGGAGGTGGTTACAGATaGCCCGAAGCGTTGGATGCACTTCCACGCAGAATTTACACTTGT +
Preference number: 5 (lower is better)
Translates to: PGRYHTGHVSGGGYR*PEALDALPRRIYTC
Trigger: ACAAGTGTAAATTCTGCGTGGAAGTGCATCCAACGCTTCGGGCCATCTGTAACCACCTCCGGAAACATGTCCAGTATGGTAGCGTCCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGCTGCATCTGTATGTTTaGGCTTCAGCTGACATGGTA +
Preference number: 5 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTLHLYV*ASADMV
Trigger: TACCATGTCAGCTGAAGCCAAAACATACAGATGCAG...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATCCTCAGCGGTCACCTaGATGGCCGGGTGTCGCTTC +
Preference number: 5 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLSSAVT*MAGCRF
Trigger: GAAGCGACACCCGGCCATCAAGGTGACCGCTGAGGA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGTAACAGATCCTCAGCGGTCACCTaGATGGCCGGGTGTCGCTTC +
Preference number: 5 (lower is better)
Translates to: KQTKQSSQHTRRPAQCNRSSAVT*MAGCRF
Trigger: GAAGCGACACCCGGCCATCAAGGTGACCGCTGAGGA...TCTGTTACATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGTAACAGATGGCATGCTGCTTCTTaGGGAACACCCCCGGGTGGC +
Preference number: 5 (lower is better)
Translates to: KQTKQSSQHTRRPAQCNRWHAAS*GTPPGG
Trigger: GCCACCCGGGGGTGTTCCCAAAGAAGCAGCATGCCA...TCTGTTACATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGCAGCTCGGCTATGCTTaGCAATTTGCTATCACAGTG +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVREQLGYA*QFAITV
Trigger: CACTGTGATAGCAAATTGCAAAGCATAGCCGAGCTG...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGTTCTGGAATTCCTCATaGTGGATGTTCAAGTGTGAG +
Preference number: 5 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEFWNSS*WMFKCE
Trigger: CTCACACTTGAACATCCACAATGAGGAATTCCAGAA...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGTCTGCATATTTCTGCTaGCTCAAAAGCTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: SSVSGSLGFHTLSERVTESAYFC*LKSCFL
Trigger: GAGGAAACAGCTTTTGAGCAAGCAGAAATATGCAGA...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTTCACCAGCATGGGCTTaGAGGATGTGTGTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFSPAWA*RMCVFN
Trigger: GTTGAAGACACACATCCTCAAAGCCCATGCTGGTGA...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTACGCGGCTCTTGTTTCTaGCCAGGGCGGCTGACTGGT +
Preference number: 5 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLRGSCF*PGRLTG
Trigger: ACCAGTCAGCCGCCCTGGCAAGAAACAAGAGCCGCG...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATGGCTCATCGTCTTCCTaGGCCTCTATGGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHGSSSS*ASMEGS
Trigger: GCTGCCCTCCATAGAGGCCAAGGAAGACGATGAGCC...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGAAAGTCTATCCCAATaGGCTCATCGTCTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVREESLSQ*AHRLPW
Trigger: CCAAGGAAGACGATGAGCCAATTGGGATAGACTTTC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGTGCAGTTTGGTCTGGTaGATTTTGCTCTGCAAATTG +
Preference number: 5 (lower is better)
Translates to: SSVSGSLGFHTLSERVTECSLVW*ILLCKL
Trigger: CAATTTGCAGAGCAAAATCAACCAGACCAAACTGCA...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 90 bp ATCCTACTTGTCTCCTCCACGTCATTCTGGGATATGTCAGCAGACTaGTCCACATCATGCACAAAGTCCTCAGCGGTCACCTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: ILLVSSTSFWDMSAD*STSCTKSSAVTLMA
Trigger: GGCCATCAAGGTGACCGCTGAGGACTTTGTGCATGATGTGGAGCAGTCTGCTGACATATCCCAGAATGACGTGGAGGAGACAAGTAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp CGGGCTGGGTGTTCAGCAGAGCCGCATTGGACACTTGATCTTTCATaGTTGCTGAAGAGCCGTAGTAATCCTCTTCGTCTTCAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: RAGCSAEPHWTLDLS*LLKSRSNPLRLQKA
Trigger: CGCTTTCTGAAGACGAAGAGGATTACTACGGCTCTTCAGCAAGCATGAAAGATCAAGTGTCCAATGCGGCTCTGCTGAACACCCAGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp CGCTCTTTAAGGGAAAGTCTATCCCAATTGGCTCATCGTCTTCCTTaGCCTCTATGGAGGGCAGCTGCATACTCTCCTCCACCATCTCCT +
Preference number: 5 (lower is better)
Translates to: RSLRESLSQLAHRLP*PLWRAAAYSPPPSP
Trigger: AGGAGATGGTGGAGGAGAGTATGCAGCTGCCCTCCATAGAGGCCAAGGAAGACGATGAGCCAATTGGGATAGACTTTCCCTTAAAGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp GATGGACTCTTAGCCCTTTCAGAGTCATGGTGGAATAACTACACATaGTGCACTTGTAAGGGTGCAAAGGTGGGGCCTGTGTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: DGLLALSESWWNNYT*CTCKGAKVGPVWVA
Trigger: AGCCACCCACACAGGCCCCACCTTTGCACCCTTACAAGTGCACCATGTGTAGTTATTCCACCATGACTCTGAAAGGGCTAAGAGTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTGACACAATGCCTTTCTaGCTGAAGGACTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFDTMPF*LKDWKE
Trigger: TTCCTTCCAGTCCTTCAGCAAGAAAGGCATTGTGTC...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTGAGCCACTCGATGTCTaGAGCTTCGCCTTCCACCTC +
Preference number: 5 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIEPLDV*SFAFHL
Trigger: GAGGTGGAAGGCGAAGCTCAAGACATCGAGTGGCTC...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAAAGGCCTCTCTTGTTaGAAATCTGCAAAAGCACCA +
Preference number: 5 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVKGLSC*KSAKAP
Trigger: TGGTGCTTTTGCAGATTTCAAACAAGAGAGGCCTTT...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCAGGACCCGGTCACATaGACTGCAATGGTATCCCCC +
Preference number: 5 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHQDPVT*TAMVSP
Trigger: GGGGGATACCATTGCAGTCAATGTGACCGGGTCCTG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR CAA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGAAGTATTTTGACAGTTaGGAACGGCACACTTCAATG +
Preference number: 5 (lower is better)
Translates to: SSVSGSLGFHTLSERVTEKYFDS*ERHTSM
Trigger: CATTGAAGTGTGCCGTTCCAAACTGTCAAAATACTT...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATTGGAGACGTTAGCGTaGGGCATCTCCCGGCTCGCA +
Preference number: 5 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLLETLA*GISRLA
Trigger: TGCGAGCCGGGAGATGCCCAACGCTAACGTCTCCAA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp TCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGGAGTCGAATTTTGGCAAGTaGTCGCAGAATGAATGTTTG +
Preference number: 5 (lower is better)
Translates to: SSVSGSLGFHTLSERVTESNFGK*SQNECL
Trigger: CAAACATTCATTCTGCGACAACTTGCCAAAATTCGA...CTCCGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCCTAGCAAGCTTCCTATaGGCCTTAGCTACAAAGTTA +
Preference number: 5 (lower is better)
Translates to: EKSSVSGSLGFHTLSERVLASFL*ALATKL
Trigger: TAACTTTGTAGCTAAGGCCAATAGGAAGCTTGCTAG...GACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGTTGGTCTGGTTGATTTaGCTCTGCAAATTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVRELVWLI*LCKLLA
Trigger: AGCCAGCAATTTGCAGAGCAAAATCAACCAGACCAA...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCTCCGAATGGTCAAAGTaGAGTACATTCATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVSEWSK*STFMAS
Trigger: AGAGGCCATGAATGTACTCAACTTTGACCATTCGGA...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 90 bp TCAGTGCATAGAAATAGGGGGAGGTATACGAGCACTGCCTACATTTaGGCGCTCGAAGTTTCGTTTTGTCCCGCTCCATACCGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SVHRNRGRYTSTAYI*ALEVSFCPAPYRKQ
Trigger: CTGCTTCCGGTATGGAGCGGGACAAAACGAAACTTCGAGCGCTCAAATGTAGGCAGTGCTCGTATACCTCCCCCTATTTCTATGCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp GGACAACTCGCTCTTCTCGGTGCAGCACTATGTGGTCGATCATGTTaGGTTTGTATTTGGTGTGATAGAGGCAGAGAGGACAGCGGAGAT +
Preference number: 5 (lower is better)
Translates to: GQLALLGAALCGRSC*VCIWCDRGREDSGD
Trigger: ATCTCCGCTGTCCTCTCTGCCTCTATCACACCAAATACAAACGCAACATGATCGACCACATAGTGCTGCACCGAGAAGAGCGAGTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp ATCCCAATTGGCTCATCGTCTTCCTTGGCCTCTATGGAGGGCAGCTaGATACTCTCCTCCACCATCTCCTTTGTATGGATTTCGTTCCTG +
Preference number: 5 (lower is better)
Translates to: IPIGSSSSLASMEGS*ILSSTISFVWISFL
Trigger: CAGGAACGAAATCCATACAAAGGAGATGGTGGAGGAGAGTATGCAGCTGCCCTCCATAGAGGCCAAGGAAGACGATGAGCCAATTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp TTGCTCAAAAGCTGTTTCCTCCTCTCCTGGCGTTTGGCACGCTTCTaGAATTCCTCATTGTGGATGTTCAAGTGTGAGGTCAGCTCGGCT +
Preference number: 5 (lower is better)
Translates to: LLKSCFLLSWRLARF*NSSLWMFKCEVSSA
Trigger: AGCCGAGCTGACCTCACACTTGAACATCCACAATGAGGAATTCCAGAAGCGTGCCAAACGCCAGGAGAGGAGGAAACAGCTTTTGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp CTTCTCGGTGCAGCACTATGTGGTCGATCATGTTGCGTTTGTATTTaGTGTGATAGAGGCAGAGAGGACAGCGGAGATCTTTGGGGCCTT +
Preference number: 5 (lower is better)
Translates to: LLGAALCGRSCCVCI*CDRGREDSGDLWGL
Trigger: AAGGCCCCAAAGATCTCCGCTGTCCTCTCTGCCTCTATCACACCAAATACAAACGCAACATGATCGACCACATAGTGCTGCACCGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp AGGGAAAGTCTATCCCAATTGGCTCATCGTCTTCCTTGGCCTCTATaGAGGGCAGCTGCATACTCTCCTCCACCATCTCCTTTGTATGGA +
Preference number: 5 (lower is better)
Translates to: RESLSQLAHRLPWPL*RAAAYSPPPSPLYG
Trigger: TCCATACAAAGGAGATGGTGGAGGAGAGTATGCAGCTGCCCTCCATAGAGGCCAAGGAAGACGATGAGCCAATTGGGATAGACTTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp GTTGGTTGGTTTGGGATTAGGGGTAATATGCTGACCGTAATATCCTaGACTGTGGCCATAGTAACCTCCGCTCCCCAACGCAGTTGCACT +
Preference number: 5 (lower is better)
Translates to: VGWFGIRGNMLTVIS*TVAIVTSAPQRSCT
Trigger: AGTGCAACTGCGTTGGGGAGCGGAGGTTACTATGGCCACAGTCCAGGATATTACGGTCAGCATATTACCCCTAATCCCAAACCAACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTCTGCATCTGTATGTTTaGGCTTCAGCTGACATGGTA +
Preference number: 5 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFLHLYV*ASADMV
Trigger: TACCATGTCAGCTGAAGCCAAAACATACAGATGCAG...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTAGGCCGTGCAAGTTGTaGTACTCGGACTGGCACACT +
Preference number: 5 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIRPCKL*YSDWHT
Trigger: AGTGTGCCAGTCCGAGTACAACAACTTGCACGGCCT...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAAGGAGGCCGTGCAAGTaGTTGTACTCGGACTGGCAC +
Preference number: 5 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLRRPCK*LYSDWH
Trigger: GTGCCAGTCCGAGTACAACAACTTGCACGGCCTCCT...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTGAAGAGATTGTTTTaGCCCTCGGGCTGGGCACGG +
Preference number: 5 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHLKRLF*PSGWAR
Trigger: CCGTGCCCAGCCCGAGGGCAAAAACAATCTCTTCAA...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTTGAAGAGATTGTTTTaGCCCTCGGGCTGGGCACGG +
Preference number: 5 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTILKRLF*PSGWAR
Trigger: CCGTGCCCAGCCCGAGGGCAAAAACAATCTCTTCAA...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTTCCCCTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCGCTATGCTTTGCAATTaGCTATCACAGTGCTTACAC +
Preference number: 5 (lower is better)
Translates to: VPLGEVFCVREPRFPHTVAMLCN*LSQCLH
Trigger: GTGTAAGCACTGTGATAGCAAATTGCAAAGCATAGC...GACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAGGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGCTATGCTTTGCAATTaGCTATCACAGTGCTTACAC +
Preference number: 5 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSAMLCN*LSQCLH
Trigger: GTGTAAGCACTGTGATAGCAAATTGCAAAGCATAGC...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCATTCTGGAATTCCTCATaGTGGATGTTCAAGTGTGAG +
Preference number: 5 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSFWNSS*WMFKCE
Trigger: CTCACACTTGAACATCCACAATGAGGAATTCCAGAA...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAACTCCTCTCCTGGCGTTaGGCACGCTTCTGGAATTCC +
Preference number: 5 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKLLSWR*ARFWNS
Trigger: GGAATTCCAGAAGCGTGCCAAACGCCAGGAGAGGAG...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTTTTCATCCTCCAACATaGCATCAAGCAAGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFFHPPT*HQASSV
Trigger: GACACTGCTTGCTTGATGCAATGTTGGAGGATGAAA...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGATATGGCGATCCAAGTaGTGTCTGAATGCAGAAACA +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVREIWRSK*CLNAET
Trigger: TGTTTCTGCATTCAGACACAACTTGGATCGCCATAT...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAAGGAAGGGTCAGGGCTTaGCCATGGACCTTGAGGGAA +
Preference number: 5 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKGRVRA*PWTLRE
Trigger: TTCCCTCAAGGTCCATGGCAAAGCCCTGACCCTTCC...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCACGAAGTATTTTGACAGTTaGGAACGGCACACTTCAATG +
Preference number: 5 (lower is better)
Translates to: KSSVSGSLGFHTLSERVTKYFDS*ERHTSM
Trigger: CATTGAAGTGTGCCGTTCCAAACTGTCAAAATACTT...CGTGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTATGCTAGAAAGGATCTaGACCATACTGCGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFMLERI*TILRCF
Trigger: GAAACACCGCAGTATGGTCAAGATCCTTTCTAGCAT...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATATGGAGCCCCTGAAATaGGAGACGTTAGCGTTGGGC +
Preference number: 5 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHMEPLK*ETLALG
Trigger: GCCCAACGCTAACGTCTCCAATTTCAGGGGCTCCAT...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTCTATCTCGTCAATCCTaGTTCTCTTCTTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFLSRQS*FSSSQV
Trigger: CACCTGTGAAGAAGAGAACAAGGATTGACGAGATAG...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGTCTGGAGTAAAGGTCTaGGGAGGAGTGTTTTTGTTA +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVRESGVKV*GGVFLL
Trigger: TAACAAAAACACTCCTCCCAAGACCTTTACTCCAGA...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 90 bp GACTTGAAAGAGCAGAGTTTGCAGCGGAACGGTTTGTGGTGTCCGTaGTGGGTCTGCATATGGCGATCCAAGTTGTGTCTGAATGCAGAA +
Preference number: 5 (lower is better)
Translates to: DLKEQSLQRNGLWCP*WVCIWRSKLCLNAE
Trigger: TTCTGCATTCAGACACAACTTGGATCGCCATATGCAGACCCATCACGGACACCACAAACCGTTCCGCTGCAAACTCTGCTCTTTCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 90 bp CCATCAGAGCCCATGAGCTGCTCTGCAGACAGTCCTGACGCCTGGTaGTCCAGAACACTTAAACCATTCTCACTGTCTACCTCATTTAAG +
Preference number: 5 (lower is better)
Translates to: PSEPMSCSADSPDAW*SRTLKPFSLSTSFK
Trigger: CTTAAATGAGGTAGACAGTGAGAATGGTTTAAGTGTTCTGGATCACCAGGCGTCAGGACTGTCTGCAGAGCAGCTCATGGGCTCTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 90 bp GGTGTTCAGCAGAGCCGCATTGGACACTTGATCTTTCATGCTTGCTaGAGAGCCGTAGTAATCCTCTTCGTCTTCAGAAAGCGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: GVQQSRIGHLIFHAC*RAVVILFVFRKREL
Trigger: GAGCTCACGCTTTCTGAAGACGAAGAGGATTACTACGGCTCTTCAGCAAGCATGAAAGATCAAGTGTCCAATGCGGCTCTGCTGAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 90 bp TGTGGCCTTCAGGGCAGGGTGGTCTTTCTTGATATGCTTCCTCAGTaGATAGAAATAGGGGGAGGTATACGAGCACTGCCTACATTTGAG +
Preference number: 5 (lower is better)
Translates to: CGLQGRVVFLDMLPQ*IEIGGGIRALPTFE
Trigger: CTCAAATGTAGGCAGTGCTCGTATACCTCCCCCTATTTCTATGCACTGAGGAAGCATATCAAGAAAGACCACCCTGCCCTGAAGGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp TCCTCTTCCTCCTCATCGTCCTCGACGTTGATGATCGCGTCTTCCTaGAGTTTGGTCTGGTTGATTTTGCTCTGCAAATTGCTGGCTATC +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSTLMIASS*SLVWLILLCKLLAI
Trigger: GATAGCCAGCAATTTGCAGAGCAAAATCAACCAGACCAAACTGCAGGAAGACGCGATCATCAACGTCGAGGACGATGAGGAGGAAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp TTCCTCCTCTCCTGGCGTTTGGCACGCTTCTGGAATTCCTCATTGTaGATGTTCAAGTGTGAGGTCAGCTCGGCTATGCTTTGCAATTTG +
Preference number: 5 (lower is better)
Translates to: FLLSWRLARFWNSSL*MFKCEVSSAMLCNL
Trigger: CAAATTGCAAAGCATAGCCGAGCTGACCTCACACTTGAACATCCACAATGAGGAATTCCAGAAGCGTGCCAAACGCCAGGAGAGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp ATACTGGACATGTTTCCGGAGGTGGTTACAGATGGCCCGAAGCGTTaGATGCACTTCCACGCAGAATTTACACTTGTAGCCCACCACTTT +
Preference number: 5 (lower is better)
Translates to: ILDMFPEVVTDGPKR*MHFHAEFTLVAHHF
Trigger: AAAGTGGTGGGCTACAAGTGTAAATTCTGCGTGGAAGTGCATCCAACGCTTCGGGCCATCTGTAACCACCTCCGGAAACATGTCCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp TGGCGATCCAAGTTGTGTCTGAATGCAGAAACAAAGGAGCAATACTaGCAGCTGTACTTGTCCTCTCTGGTAAACATGGCCAAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: WRSKLCLNAETKEQY*QLYLSSLVNMAKAR
Trigger: CCTGGCCTTGGCCATGTTTACCAGAGAGGACAAGTACAGCTGCCAGTATTGCTCCTTTGTTTCTGCATTCAGACACAACTTGGATCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp TTGGACATTTTGGGAGACATTGGAGCACCCACCTCAAATGATAATTaGGAAAGGGCAGAGCCTCTGTCCACAGACACCATGCGCATGGTT +
Preference number: 5 (lower is better)
Translates to: LDILGDIGAPTSNDN*ERAEPLSTDTMRMV
Trigger: AACCATGCGCATGGTGTCTGTGGACAGAGGCTCTGCCCTTTCCCAATTATCATTTGAGGTGGGTGCTCCAATGTCTCCCAAAATGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGGTCAGTAGGCACCATACCCTaGTTTAAAAATCCTACTTGT +
Preference number: 5 (lower is better)
Translates to: RSLLCPGASVSTHCPRGSVGTIP*FKNPTC
Trigger: ACAAGTAGGATTTTTAAACAAGGGTATGGTGCCTAC...TGACCCTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAGTGGAACAGAAGTACTaGCAGAGCTGGCACCGGAAC +
Preference number: 5 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLVEQKY*QSWHRN
Trigger: GTTCCGGTGCCAGCTCTGCAAGTACTTCTGTTCCAC...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAAGTGGAACAGAAGTACTaGCAGAGCTGGCACCGGAAC +
Preference number: 5 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKVEQKY*QSWHRN
Trigger: GTTCCGGTGCCAGCTCTGCAAGTACTTCTGTTCCAC...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTGCACACTTGAAGAGATaGTTTTTGCCCTCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIAHLKR*FLPSGW
Trigger: CCAGCCCGAGGGCAAAAACAATCTCTTCAAGTGTGC...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATATCACCTTGTTGGGCTaGTCACTGATGGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHITLLG*SLMVLE
Trigger: CTCCAGGACCATCAGTGACAAGCCCAACAAGGTGAT...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTAAAGGCCTCTCTTGTTaGAAATCTGCAAAAGCACCA +
Preference number: 5 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFKGLSC*KSAKAP
Trigger: TGGTGCTTTTGCAGATTTCAAACAAGAGAGGCCTTT...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATCCTCCAGGAGAGATTaGTCGGCAGCCACTACACAG +
Preference number: 5 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLSSRRD*SAATTQ
Trigger: CTGTGTAGTGGCTGCCGACAAATCTCTCCTGGAGGA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTAGGAGAAGTCTTCTGTGTCCGGGAGCCTCGGTTTCCACACACTGTCCGAGAGGAAAAGATCATAGCATaGTTGATTTTCACCGTGGGA +
Preference number: 5 (lower is better)
Translates to: LGEVFCVREPRFPHTVREEKIIA*LIFTVG
Trigger: TCCCACGGTGAAAATCAACAATGCTATGATCTTTTC...CTCTCGGACAGTGTGTGGAAACCGAGGCTCCCGGACACAGAAGACTTCTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 90 bp CGCAAACGAGCAAACGTCACAATCGTAAACGACAACGGTGTTCACTaGAGGGTCCTTCTGGCTTTCACATTCTGGAGTAAAGGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: RKRANVTIVNDNGVH*RVLLAFTFWSKGLG
Trigger: CCCAAGACCTTTACTCCAGAATGTGAAAGCCAGAAGGACCCTTCAGTGAACACCGTTGTCGTTTACGATTGTGACGTTTGCTCGTTTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 90 bp GGCCTCTCTTGTTTGAAATCTGCAAAAGCACCATCTGCATATTTCTaGTTGCTCAAAAGCTGTTTCCTCCTCTCCTGGCGTTTGGCACGC +
Preference number: 5 (lower is better)
Translates to: GLSCLKSAKAPSAYF*LLKSCFLLSWRLAR
Trigger: GCGTGCCAAACGCCAGGAGAGGAGGAAACAGCTTTTGAGCAAGCAGAAATATGCAGATGGTGCTTTTGCAGATTTCAAACAAGAGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp CTGGGTTCATTATCATTCTGCGCTTCAGAGACATTAGGCCCTTCTTaGTGCCGGATGCTAGAAAGGATCTTGACCATACTGCGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: LGSLSFCASETLGPS*CRMLERILTILRCF
Trigger: GAAACACCGCAGTATGGTCAAGATCCTTTCTAGCATCCGGCAGCAAGAAGGGCCTAATGTCTCTGAAGCGCAGAATGATAATGAACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp GCGAGTGTTGATGTACGGACAATGCCTGCATTTGTAGACGGCACCTaGGTTGATGTCAATATCCTGGGCAAAATCAGCAGCCTTCACTTT +
Preference number: 5 (lower is better)
Translates to: ASVDVRTMPAFVDGT*VDVNILGKISSLHF
Trigger: AAAGTGAAGGCTGCTGATTTTGCCCAGGATATTGACATCAACCCAGGTGCCGTCTACAAATGCAGGCATTGTCCGTACATCAACACTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp CCTCCACCATCTCCTTTGTATGGATTTCGTTCCTGCTCACTTGGTTaGTATCATGCAATGACATGCCGTGTCTCAACACGTGTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: PPPSPLYGFRSCSLG*YHAMTCRVSTRVFP
Trigger: GGGAAAGACACGTGTTGAGACACGGCATGTCATTGCATGATACCAACCAAGTGAGCAGGAACGAAATCCATACAAAGGAGATGGTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp CCTCTGCATCCTCCAGGAGAGATTTGTCGGCAGCCACTACACAGATaGTTACTGTTTCGCTCTTTAAGGGAAAGTCTATCCCAATTGGCT +
Preference number: 5 (lower is better)
Translates to: PLHPPGEICRQPLHR*LLFRSLRESLSQLA
Trigger: AGCCAATTGGGATAGACTTTCCCTTAAAGAGCGAAACAGTAACCATCTGTGTAGTGGCTGCCGACAAATCTCTCCTGGAGGATGCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp CCTCTGGGTGGTGTTCACCATAATGCTGTTGGAGGTCTTCAAAGTTaGTGTAGTCAATATAGCATTCCAGGCACCTGTACACTGCGCTGT +
Preference number: 5 (lower is better)
Translates to: PLGGVHHNAVGGLQS*CSQYSIPGTCTLRC
Trigger: ACAGCGCAGTGTACAGGTGCCTGGAATGCTATATTGACTACACCAACTTTGAAGACCTCCAACAGCATTATGGTGAACACCACCCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp CTTCAGGGTGTTTCTTCTGATAGTGAACCAAGACAGAGTGCATGTTaGGGCTCGCAAACGAGCAAACGTCACAATCGTAAACGACAACGG +
Preference number: 5 (lower is better)
Translates to: LQGVSSDSEPRQSAC*GSQTSKRHNRKRQR
Trigger: CCGTTGTCGTTTACGATTGTGACGTTTGCTCGTTTGCGAGCCCCAACATGCACTCTGTCTTGGTTCACTATCAGAAGAAACACCCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AATACACAAAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATTCTCTGGGGAAAGTCTaGCATCCTCTGGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: NTQSKQNRVHSTHEGQPNSLGKV*HPLGTQ
Trigger: CTGAGTGCCCAGAGGATGCAAGACTTTCCCCAGAGA...ATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTTTGTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTGCACACAGGGCACACTaGAAGAGATTGTTTTTGCCC +
Preference number: 5 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIAHRAH*KRLFLP
Trigger: GGGCAAAAACAATCTCTTCAAGTGTGCCCTGTGTGC...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAGTGCTGAAGGACAGCTaGAAGCATTTGATGCAGCGG +
Preference number: 5 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLVLKDS*KHLMQR
Trigger: CCGCTGCATCAAATGCTTCAAGCTGTCCTTCAGCAC...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTCACCAGCATGGGCTTaGAGGATGTGTGTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHSPAWA*RMCVFN
Trigger: GTTGAAGACACACATCCTCAAAGCCCATGCTGGTGA...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp CTTCTCAGCCCACGCCGGCCCGCCCACATTTTCATCACGGTTCAAGTAAGGTTTTACGGTTTCAGTTCATaGTGCTTTTCTATGTGTTGC +
Preference number: 5 (lower is better)
Translates to: LLSPRRPAHIFITVQVRFYGFSS*CFSMCC
Trigger: GCAACACATAGAAAAGCACAATGAACTGAAACCGTA...AAACCTTACTTGAACCGTGATGAAAATGTGGGCGGGCCGGCGTGGGCTGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 90 bp AGACATCAAACTCAGGCTGGTTGTGGTACTTCTCATAGTGGATTTTaGGTTTCTCCAGAGTGCCGTGTGTGTAAGGACACAGCTTGCACC +
Preference number: 5 (lower is better)
Translates to: RHQTQAGCGTSHSGF*VSPECRVCKDTACT
Trigger: GGTGCAAGCTGTGTCCTTACACACACGGCACTCTGGAGAAACTCAAAATCCACTATGAGAAGTACCACAACCAGCCTGAGTTTGATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 90 bp GCGTTTGGCACGCTTCTGGAATTCCTCATTGTGGATGTTCAAGTGTaGGGTCAGCTCGGCTATGCTTTGCAATTTGCTATCACAGTGCTT +
Preference number: 5 (lower is better)
Translates to: AFGTLLEFLIVDVQV*GQLGYALQFAITVL
Trigger: AAGCACTGTGATAGCAAATTGCAAAGCATAGCCGAGCTGACCTCACACTTGAACATCCACAATGAGGAATTCCAGAAGCGTGCCAAACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp GGTTCATTATCATTCTGCGCTTCAGAGACATTAGGCCCTTCTTGCTaGCGGATGCTAGAAAGGATCTTGACCATACTGCGGTGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: GSLSFCASETLGPSC*RMLERILTILRCFF
Trigger: GAAGAAACACCGCAGTATGGTCAAGATCCTTTCTAGCATCCGGCAGCAAGAAGGGCCTAATGTCTCTGAAGCGCAGAATGATAATGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp CATATTTCTGCTTGCTCAAAAGCTGTTTCCTCCTCTCCTGGCGTTTaGCACGCTTCTGGAATTCCTCATTGTGGATGTTCAAGTGTGAGG +
Preference number: 5 (lower is better)
Translates to: HISACSKAVSSSPGV*HASGIPHCGCSSVR
Trigger: CCTCACACTTGAACATCCACAATGAGGAATTCCAGAAGCGTGCCAAACGCCAGGAGAGGAGGAAACAGCTTTTGAGCAAGCAGAAATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp CCATCTGCATATTTCTGCTTGCTCAAAAGCTGTTTCCTCCTCTCCTaGCGTTTGGCACGCTTCTGGAATTCCTCATTGTGGATGTTCAAG +
Preference number: 5 (lower is better)
Translates to: PSAYFCLLKSCFLLS*RLARFWNSSLWMFK
Trigger: CTTGAACATCCACAATGAGGAATTCCAGAAGCGTGCCAAACGCCAGGAGAGGAGGAAACAGCTTTTGAGCAAGCAGAAATATGCAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp CTCTCCTCCACCATCTCCTTTGTATGGATTTCGTTCCTGCTCACTTaGTTGGTATCATGCAATGACATGCCGTGTCTCAACACGTGTCTT +
Preference number: 5 (lower is better)
Translates to: LSSTISFVWISFLLT*LVSCNDMPCLNTCL
Trigger: AAGACACGTGTTGAGACACGGCATGTCATTGCATGATACCAACCAAGTGAGCAGGAACGAAATCCATACAAAGGAGATGGTGGAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp GAAATGCTACGGCGGTGCATGGTGAGGAAAGGACAAAAGGGACACTaGAATCTATTCATGAACCTTCGAAATGGAATCCCCTTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: EMLRRCMVRKGQKGH*NLFMNLRNGIPLVS
Trigger: AGAGACCAAGGGGATTCCATTTCGAAGGTTCATGAATAGATTCCAGTGTCCCTTTTGTCCTTTCCTCACCATGCACCGCCGTAGCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp AATGTTTGTGCTGCTGATGGACTCTTAGCCCTTTCAGAGTCATGGTaGAATAACTACACATGGTGCACTTGTAAGGGTGCAAAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: NVCAADGLLALSESW*NNYTWCTCKGAKVG
Trigger: CCCCACCTTTGCACCCTTACAAGTGCACCATGTGTAGTTATTCCACCATGACTCTGAAAGGGCTAAGAGTCCATCAGCAGCACAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp TCATCGTCCTCGACGTTGATGATCGCGTCTTCCTGCAGTTTGGTCTaGTTGATTTTGCTCTGCAAATTGCTGGCTATCTCGTCAATCCTT +
Preference number: 5 (lower is better)
Translates to: SSSSTLMIASSCSLV*LILLCKLLAISSIL
Trigger: AAGGATTGACGAGATAGCCAGCAATTTGCAGAGCAAAATCAACCAGACCAAACTGCAGGAAGACGCGATCATCAACGTCGAGGACGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAGAGCACTGCCTACATTaGAGCGCTCGAAGTTTCGTT +
Preference number: 5 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLEHCLH*SARSFV
Trigger: AACGAAACTTCGAGCGCTCAAATGTAGGCAGTGCTC...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp TCACAGACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAAGGAGGCCGTGCAAGTaGTTGTACTCGGACTGGCAC +
Preference number: 5 (lower is better)
Translates to: SQTSSPGMKLFSTFEMRPRRPCK*LYSDWH
Trigger: GTGCCAGTCCGAGTACAACAACTTGCACGGCCTCCT...TGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGTCTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTCAGCTCGGCTATGCTTaGCAATTTGCTATCACAGTG +
Preference number: 5 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIQLGYA*QFAITV
Trigger: CACTGTGATAGCAAATTGCAAAGCATAGCCGAGCTG...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTACTGGCAGCTGTACTaGTCCTCTCTGGTAAACATG +
Preference number: 5 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHYWQLY*SSLVNM
Trigger: CATGTTTACCAGAGAGGACAAGTACAGCTGCCAGTA...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTAGCTTTGCCATGGACCTaGAGGGAATGTTCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLALPWT*RECSFN
Trigger: GTTGAAGGAACATTCCCTCAAGGTCCATGGCAAAGC...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATCTCCCTGCAAGTATTTaGACAGTTTGGAACGGCACA +
Preference number: 5 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHLPASI*TVWNGT
Trigger: TGTGCCGTTCCAAACTGTCAAAATACTTGCAGGGAG...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATGAAAGTCTATCCCAATaGGCTCATCGTCTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHESLSQ*AHRLPW
Trigger: CCAAGGAAGACGATGAGCCAATTGGGATAGACTTTC...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGTAACAGAGCCCTCCGAGGTGATTaGTATGTGCAAAACTGGCAA +
Preference number: 5 (lower is better)
Translates to: KQTKQSSQHTRRPAQCNRALRGD*YVQNWQ
Trigger: TTGCCAGTTTTGCACATACAAATCACCTCGGAGGGC...TCTGTTACATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAAGGTGGGGAACCCATGTaGGACATTTTGGGAGACATT +
Preference number: 5 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKGGEPM*DILGDI
Trigger: AATGTCTCCCAAAATGTCCAACATGGGTTCCCCACC...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 90 bp CTTGAGGGAATGTTCCTTCAACTGGCTGATTGTCATGGTGGAAAATaGGCACCAAGAACACTTGTAGGCATGTTCACCAGCATGGGCTTT +
Preference number: 5 (lower is better)
Translates to: LEGMFLQLADCHGGK*APRTLVGMFTSMGF
Trigger: AAAGCCCATGCTGGTGAACATGCCTACAAGTGTTCTTGGTGCTCATTTTCCACCATGACAATCAGCCAGTTGAAGGAACATTCCCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 90 bp TGTGCTTTTCTATGTGTTGCTGGAGACTCTCGTCACTGGAGCAGGTaGAGGTACACTTATCACAGCGGAAAACTACTCCCTGCAAGTATT +
Preference number: 5 (lower is better)
Translates to: CAFLCVAGDSRHWSR*RYTYHSGKLLPASI
Trigger: AATACTTGCAGGGAGTAGTTTTCCGCTGTGATAAGTGTACCTTCACCTGCTCCAGTGACGAGAGTCTCCAGCAACACATAGAAAAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 90 bp GGTGGCGCTGTGGACTCCTTCAGACTGTTTTTGTGGTACATCTTCTaGTGCTTAATTATCCTTGCCCTCCGAGGTGATTTGTATGTGCAA +
Preference number: 5 (lower is better)
Translates to: GGAVDSFRLFLWYIF*CLIILALRGDLYVQ
Trigger: TTGCACATACAAATCACCTCGGAGGGCAAGGATAATTAAGCATCAGAAGATGTACCACAAAAACAGTCTGAAGGAGTCCACAGCGCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 90 bp CTGGGACTCAGCATTCAGCCCTTCCTGCTGCTCTACAACGTAGCTTaGAAAGATCATAGCATTGTTGATTTTCACCGTGGGATGCATTCT +
Preference number: 5 (lower is better)
Translates to: LGLSIQPFLLLYNVA*KDHSIVDFHRGMHS
Trigger: AGAATGCATCCCACGGTGAAAATCAACAATGCTATGATCTTTTCAAGCTACGTTGTAGAGCAGCAGGAAGGGCTGAATGCTGAGTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 90 bp GGGTATACTATTTTCACAATTCACAGGGCCTATCAACTCTTCAGGTaGCAGGAGGGCCTTGTCTACACCGTCTTTCTCCTTGATGATATC +
Preference number: 5 (lower is better)
Translates to: GYTIFTIHRAYQLFR*QEGLVYTVFLLDDI
Trigger: GATATCATCAAGGAGAAAGACGGTGTAGACAAGGCCCTCCTGGCACCTGAAGAGTTGATAGGCCCTGTGAATTGTGAAAATAGTATACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp GGAATTCCTCATTGTGGATGTTCAAGTGTGAGGTCAGCTCGGCTATaGTTTGCAATTTGCTATCACAGTGCTTACACTGGAAGGTGGAGT +
Preference number: 5 (lower is better)
Translates to: GIPHCGCSSVRSARL*FAICYHSAYTGRWS
Trigger: ACTCCACCTTCCAGTGTAAGCACTGTGATAGCAAATTGCAAAGCATAGCCGAGCTGACCTCACACTTGAACATCCACAATGAGGAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 90 bp CCAGATAAGTGGATATTTTCTATGTGGCGGGAAATGCTACGGCGGTaGATGGTGAGGAAAGGACAAAAGGGACACTGGAATCTATTCATG +
Preference number: 5 (lower is better)
Translates to: PDKWIFSMWREMLRR*MVRKGQKGHWNLFM
Trigger: CATGAATAGATTCCAGTGTCCCTTTTGTCCTTTCCTCACCATGCACCGCCGTAGCATTTCCCGCCACATAGAAAATATCCACTTATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp GTGATCATTGGGGTCCAAGATATACCTAAAGCTGAACTTAATGTATaGGTGCATTCGCTGGTAGTGGGTGCTAACACTCCGGGCAGATTT +
Preference number: 5 (lower is better)
Translates to: VIIGVQDIPKAELNV*VHSLVVGANTPGRF
Trigger: AAATCTGCCCGGAGTGTTAGCACCCACTACCAGCGAATGCACCCATACATTAAGTTCAGCTTTAGGTATATCTTGGACCCCAATGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp GTAGATCAGGTCCGAATGGTCAAAGTTGAGTACATTCATGGCCTCTaGGTGGTGTTCACCATAATGCTGTTGGAGGTCTTCAAAGTTGGT +
Preference number: 5 (lower is better)
Translates to: VDQVRMVKVEYIHGL*VVFTIMLLEVFKVG
Trigger: ACCAACTTTGAAGACCTCCAACAGCATTATGGTGAACACCACCCAGAGGCCATGAATGTACTCAACTTTGACCATTCGGACCTGATCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp TCACAGACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAAGGCCGTGCAAGTTGTaGTACTCGGACTGGCACACT +
Preference number: 5 (lower is better)
Translates to: SQTSSPGMKLFSTFEMRPRPCKL*YSDWHT
Trigger: AGTGTGCCAGTCCGAGTACAACAACTTGCACGGCCT...TGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTACTCCCTGCAAGTATTTaGACAGTTTGGAACGGCACA +
Preference number: 5 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLLPASI*TVWNGT
Trigger: TGTGCCGTTCCAAACTGTCAAAATACTTGCAGGGAG...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAAGGCTCATCGTCTTCCTaGGCCTCTATGGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKGSSSS*ASMEGS
Trigger: GCTGCCCTCCATAGAGGCCAAGGAAGACGATGAGCC...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp TCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCGGCCACACCTCGGCAACATCAGTaGGCTGTAAGAATGCCGTGT +
Preference number: 5 (lower is better)
Translates to: SMSLQSTENRMRPKCAATPRQHQ*AVRMPC
Trigger: ACACGGCATTCTTACAGCCAACTGATGTTGCCGAGG...TGTGGCCGCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGTAACAGACGAAATGGAATCCCCTaGGTCTCTAACAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: KQTKQSSQHTRRPAQCNRRNGIP*VSNSLL
Trigger: CAACAAGCTGTTAGAGACCAAGGGGATTCCATTTCG...TCTGTTACATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTAGACAGGCTTTCGCTTaGAGAATTCACAGTATCCCA +
Preference number: 5 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIRQAFA*RIHSIP
Trigger: TGGGATACTGTGAATTCTCAAAGCGAAAGCCTGTCT...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AATACACAAAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGCGTCTTCCTGCAGTTaGGTCTGGTTGATTTTGCTC +
Preference number: 5 (lower is better)
Translates to: NTQSKQNRVHSTHEGQPNASSCS*VWLILL
Trigger: GAGCAAAATCAACCAGACCAAACTGCAGGAAGACGC...ATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTTTGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAACAGCCCCTCTCATCATaGCAGCTGTGGGAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKQPLSS*QLWEEP
Trigger: AGGCTCCTCCCACAGCTGCAATGATGAGAGGGGCTG...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 90 bp AAGAACAAAACCGACATCGGTAGATCAGGTCCGAATGGTCAAAGTTaGGTACATTCATGGCCTCTGGGTGGTGTTCACCATAATGCTGTT +
Preference number: 5 (lower is better)
Translates to: KNKTDIGRSGPNGQS*VHSWPLGGVHHNAV
Trigger: AACAGCATTATGGTGAACACCACCCAGAGGCCATGAATGTACTCAACTTTGACCATTCGGACCTGATCTACCGATGTCGGTTTTGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 90 bp AGCTGGCATTTGTACGGTTTCAGTTCATTGTGCTTTTCTATGTGTTaGTGGAGACTCTCGTCACTGGAGCAGGTGAAGGTACACTTATCA +
Preference number: 5 (lower is better)
Translates to: SWHLYGFSSLCFSMC*WRLSSLEQVKVHLS
Trigger: TGATAAGTGTACCTTCACCTGCTCCAGTGACGAGAGTCTCCAGCAACACATAGAAAAGCACAATGAACTGAAACCGTACAAATGCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp TGGCATTTGTACGGTTTCAGTTCATTGTGCTTTTCTATGTGTTGCTaGAGACTCTCGTCACTGGAGCAGGTGAAGGTACACTTATCACAG +
Preference number: 5 (lower is better)
Translates to: WHLYGFSSLCFSMCC*RLSSLEQVKVHLSQ
Trigger: CTGTGATAAGTGTACCTTCACCTGCTCCAGTGACGAGAGTCTCCAGCAACACATAGAAAAGCACAATGAACTGAAACCGTACAAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 90 bp ATGAATGTTTGTGCTGCTGATGGACTCTTAGCCCTTTCAGAGTCATaGTGGAATAACTACACATGGTGCACTTGTAAGGGTGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: MNVCAADGLLALSES*WNNYTWCTCKGAKV
Trigger: CACCTTTGCACCCTTACAAGTGCACCATGTGTAGTTATTCCACCATGACTCTGAAAGGGCTAAGAGTCCATCAGCAGCACAAACATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATGCTATGCTTTGCAATTaGCTATCACAGTGCTTACAC +
Preference number: 5 (lower is better)
Translates to: KIRKEGCRDRKGATYSNHAMLCN*LSQCLH
Trigger: GTGTAAGCACTGTGATAGCAAATTGCAAAGCATAGC...ATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATTTCATCCTCCAACATaGCATCAAGCAAGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLFHPPT*HQASSV
Trigger: GACACTGCTTGCTTGATGCAATGTTGGAGGATGAAA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS TCA 90 bp TTAGCTACAAAGTTATTCTTGGAGGACAATCCAAGAATTGAGGTCTaGCTTTTCTTCACAGTGTTGCTGGAAGAGGGGTGGCTATCCGTC +
Preference number: 5 (lower is better)
Translates to: LATKLFLEDNPRIEV*LFFTVLLEEGWLSV
Trigger: GACGGATAGCCACCCCTCTTCCAGCAACACTGTGAAGAAAAGTCAGACCTCAATTCTTGGATTGTCCTCCAAGAATAACTTTGTAGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AATACACAAAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATCTGCATCTGTATGTTTaGGCTTCAGCTGACATGGTA +
Preference number: 5 (lower is better)
Translates to: NTQSKQNRVHSTHEGQPNLHLYV*ASADMV
Trigger: TACCATGTCAGCTGAAGCCAAAACATACAGATGCAG...ATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTTTGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAATTCTGGAATTCCTCATaGTGGATGTTCAAGTGTGAG +
Preference number: 5 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKFWNSS*WMFKCE
Trigger: CTCACACTTGAACATCCACAATGAGGAATTCCAGAA...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGTAACAGATCTGCATATTTCTGCTaGCTCAAAAGCTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: KQTKQSSQHTRRPAQCNRSAYFC*LKSCFL
Trigger: GAGGAAACAGCTTTTGAGCAAGCAGAAATATGCAGA...TCTGTTACATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAAAAAGGCCTCTCTTGTTaGAAATCTGCAAAAGCACCA +
Preference number: 5 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKKGLSC*KSAKAP
Trigger: TGGTGCTTTTGCAGATTTCAAACAAGAGAGGCCTTT...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AGATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTACGGTTTCAGTTCATaGTGCTTTTCTATGTGTTGC +
Preference number: 5 (lower is better)
Translates to: RSGRKDVVTGKEPHIPTIYGFSS*CFSMCC
Trigger: GCAACACATAGAAAAGCACAATGAACTGAAACCGTA...AATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAAGGTCTCATGATGGAGTaGCCCATGGAGCCCCTGAAA +
Preference number: 5 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKGLMME*PMEPLK
Trigger: TTTCAGGGGCTCCATGGGCAACTCCATCATGAGACC...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGTAACAGAATTTTGCTCTGCAAATaGCTGGCTATCTCGTCAATC +
Preference number: 5 (lower is better)
Translates to: KQTKQSSQHTRRPAQCNRILLCK*LAISSI
Trigger: GATTGACGAGATAGCCAGCAATTTGCAGAGCAAAAT...TCTGTTACATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ATCCGGAAGGAAGGATGTCGTGACAGGAAAGGAGCCACATATTCCAACCATTTATTCACCATAATGCTGTaGGAGGTCTTCAAAGTTGGT +
Preference number: 5 (lower is better)
Translates to: IRKEGCRDRKGATYSNHLFTIML*EVFKVG
Trigger: ACCAACTTTGAAGACCTCCAACAGCATTATGGTGAA...TAAATGGTTGGAATATGTGGCTCCTTTCCTGTCACGACATCCTTCCTTCCGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAAAAGATCATAGCATTGTaGATTTTCACCGTGGGATGC +
Preference number: 5 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKKIIAL*IFTVGC
Trigger: GCATCCCACGGTGAAAATCAACAATGCTATGATCTT...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 90 bp TTCAAAGTTGGTGTAGTCAATATAGCATTCCAGGCACCTGTACACTaGGCTGTGATCATTGGGGTCCAAGATATACCTAAAGCTGAACTT +
Preference number: 5 (lower is better)
Translates to: FKVGVVNIAFQAPVH*AVIIGVQDIPKAEL
Trigger: AAGTTCAGCTTTAGGTATATCTTGGACCCCAATGATCACAGCGCAGTGTACAGGTGCCTGGAATGCTATATTGACTACACCAACTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAACCAGGGGTGGAACGCTaGGTAATGGTTTGTGATGTC +
Preference number: 5 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKPGVER*VMVCDV
Trigger: GACATCACAAACCATTACCAAGCGTTCCACCCCTGG...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAAGTGCTGAAGGACAGCTaGAAGCATTTGATGCAGCGG +
Preference number: 5 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKVLKDS*KHLMQR
Trigger: CCGCTGCATCAAATGCTTCAAGCTGTCCTTCAGCAC...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp GTCCAGCAGTTCTCTCTACATTTAACCACAAGGGCCACAGGTAGTACAGACAAAGCCTGTCTGATATATTaGGCAGTGACCTTTATTTCT +
Preference number: 5 (lower is better)
Translates to: VQQFSLHLTTRATGSTDKACLIY*AVTFIS
Trigger: AGAAATAAAGGTCACTGCCAAATATATCAGACAGGC...TTTGTCTGTACTACCTGTGGCCCTTGTGGTTAAATGTAGAGAGAACTGCTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp AATACACAAAGCAAACAAAACAGAGTTCACAGCACACACGAAGGCCAGCCCAATGTAGGCACCATACCCTaGTTTAAAAATCCTACTTGT +
Preference number: 5 (lower is better)
Translates to: NTQSKQNRVHSTHEGQPNVGTIP*FKNPTC
Trigger: ACAAGTAGGATTTTTAAACAAGGGTATGGTGCCTAC...ATTGGGCTGGCCTTCGTGTGTGCTGTGAACTCTGTTTTGTTTGCTTTGTGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 90 bp TTTGTGGTACATCTTCTGATGCTTAATTATCCTTGCCCTCCGAGGTaGTTTGTATGTGCAAAACTGGCAAGAAAAGACCTTTCCAAATCC +
Preference number: 5 (lower is better)
Translates to: FVVHLLMLNYPCPPR*FVCAKLARKDLSKS
Trigger: GGATTTGGAAAGGTCTTTTCTTGCCAGTTTTGCACATACAAATCACCTCGGAGGGCAAGGATAATTAAGCATCAGAAGATGTACCACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAAGAAAGTCTATCCCAATaGGCTCATCGTCTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKESLSQ*AHRLPW
Trigger: CCAAGGAAGACGATGAGCCAATTGGGATAGACTTTC...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 90 bp TGCTTAATTATCCTTGCCCTCCGAGGTGATTTGTATGTGCAAAACTaGCAAGAAAAGACCTTTCCAAATCCTTCGTGCATCATGATATTA +
Preference number: 5 (lower is better)
Translates to: CLIILALRGDLYVQN*QEKTFPNPSCIMIL
Trigger: TAATATCATGATGCACGAAGGATTTGGAAAGGTCTTTTCTTGCCAGTTTTGCACATACAAATCACCTCGGAGGGCAAGGATAATTAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp TCACAGACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCATACGGTTTCAGTTCATaGTGCTTTTCTATGTGTTGC +
Preference number: 5 (lower is better)
Translates to: SQTSSPGMKLFSTFEMRPYGFSS*CFSMCC
Trigger: GCAACACATAGAAAAGCACAATGAACTGAAACCGTA...TGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGTCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp TGTAAATTCTATGTCATTACAGTCAACAGAAAACAGAATGCGTCCAAAATGTGCCACTCACAACAAAAGTaGCCCCGAGACTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: CKFYVITVNRKQNASKMCHSQQK*PRDLVK
Trigger: TTTGACCAAGTCTCGGGGCAACTTTTGTTGTGAGTG...GCACATTTTGGACGCATTCTGTTTTCTGTTGACTGTAATGACATAGAATTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAATTGGGAGGAGTGTTTTaGTTAAACGTAGCTGGCAAG +
Preference number: 5 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKLGGVF*LNVAGK
Trigger: CTTGCCAGCTACGTTTAACAAAAACACTCCTCCCAA...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS-3UTR CAA 90 bp ACATCCAGTCCAGGTATGAAACTGTTTAGTACATTTGAAATGAGGCCAATCAAAGACTTGGTCAAAGGCTaGACCATAGATTCTAAGATG +
Preference number: 5 (lower is better)
Translates to: TSSPGMKLFSTFEMRPIKDLVKG*TIDSKM
Trigger: CATCTTAGAATCTATGGTCAAGCCTTTGACCAAGTC...TTTGATTGGCCTCATTTCAAATGTACTAAACAGTTTCATACCTGGACTGGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 72 bp CACCCGGCCCACCAGTGTGCCACTGGCGTCTCTGGCTaGTTCCAATCCATCCAGGAACAGGTGGGAAGGGTC +
Preference number: 6 (lower is better)
Translates to: HPAHQCATGVSG*FQSIQEQVGRV
Trigger: GACCCTTCCCACCTGTTCCTGGATGGATTGGAAGCAGCCAGAGACGCCAGTGGCACACTGGTGGGCCGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS CAA 90 bp GGCAAGCCACCACCGCGAGCCACAGGCGTGGACGTCGCCATGCTCTaGGGAGCTGAATTCAAAATCTCCCGCAGGGTCTGGGACTCAGCA +
Preference number: 6 (lower is better)
Translates to: GKPPPRATGVDVAML*GAEFKISRRVWDSA
Trigger: TGCTGAGTCCCAGACCCTGCGGGAGATTTTGAATTCAGCTCCCAAGAGCATGGCGACGTCCACGCCTGTGGCTCGCGGTGGTGGCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 72 bp GCAAGCAGTGTCCACCATCCACCCGGCCCACCAGTGTaGCACTGGCGTCTCTGGCTGCTTCCAATCCATCCA +
Preference number: 6 (lower is better)
Translates to: ASSVHHPPGPPV*HWRLWLLPIHP
Trigger: TGGATGGATTGGAAGCAGCCAGAGACGCCAGTGGCACACTGGTGGGCCGGGTGGATGGTGGACACTGCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS GCA 72 bp CCATCCAGGAACAGGTGGGAAGGGTCTTCAGCCTCCTaGTTCACAGCAGCCGACACAGCCGGGACGCTACCA +
Preference number: 6 (lower is better)
Translates to: PSRNRWEGSSAS*FTAADTAGTLP
Trigger: TGGTAGCGTCCCGGCTGTGTCGGCTGCTGTGAAGCAGGAGGCTGAAGACCCTTCCCACCTGTTCCTGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079605.5
CDS CCA 72 bp CCCGCTCCATACCGGAAGCAGGGAGAAGCACACAGCTaGCAGGCTTCTGGTTCCGGTCACAGAGGCTTCGGA +
Preference number: 6 (lower is better)
Translates to: PAPYRKQGEAHS*QASGSGHRGFG
Trigger: TCCGAAGCCTCTGTGACCGGAACCAGAAGCCTGCCAGCTGTGTGCTTCTCCCTGCTTCCGGTATGGAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp CATCCACCCGGCCCACCAGTGTGCCACTGGCGTCTCTaGCTGCTTCCAATCCATCCAGGAACAGGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: HPPGPPVCHWRL*LLPIHPGTGGK
Trigger: CTTCCCACCTGTTCCTGGATGGATTGGAAGCAGCCAGAGACGCCAGTGGCACACTGGTGGGCCGGGTGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS CCA 72 bp CACCGCGAGCCACAGGCGTGGACGTCGCCATGCTCTTaGGAGCTGAATTCAAAATCTCCCGCAGGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: HREPQAWTSPCS*ELNSKSPAGSG
Trigger: CCCAGACCCTGCGGGAGATTTTGAATTCAGCTCCCAAGAGCATGGCGACGTCCACGCCTGTGGCTCGCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp CCACCGCGAGCCACAGGCGTGGACGTCGCCATGCTCTaGGGAGCTGAATTCAAAATCTCCCGCAGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: PPRATGVDVAML*GAEFKISRRVW
Trigger: CCAGACCCTGCGGGAGATTTTGAATTCAGCTCCCAAGAGCATGGCGACGTCCACGCCTGTGGCTCGCGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 72 bp CTGGTAAACATGGCCAAGGCCAGGTGGCTCCTCTCATaGGAACGCAGCCCCTGCATGGACATCAGGACCCGG +
Preference number: 6 (lower is better)
Translates to: LVNMAKARWLLS*ERSPCMDIRTR
Trigger: CCGGGTCCTGATGTCCATGCAGGGGCTGCGTTCTCATGAGAGGAGCCACCTGGCCTTGGCCATGTTTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS TCA 72 bp CTGGTAAACATGGCCAAGGCCAGGTGGCTCCTCTCATaGGAACGCAGCCCCTTCACAGCAGCCGACACAGCC +
Preference number: 6 (lower is better)
Translates to: LVNMAKARWLLS*ERSPFTAADTA
Trigger: GGCTGTGTCGGCTGCTGTGAAGGGGCTGCGTTCTCATGAGAGGAGCCACCTGGCCTTGGCCATGTTTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp TGGTGTGATAGAGGCAGAGAGGACAGCGGAGATCTTTaGGGCCTTCCTCCGGGACCGCCGAATGCCCAGCTT +
Preference number: 6 (lower is better)
Translates to: WCDRGREDSGDL*GLPPGPPNAQL
Trigger: AAGCTGGGCATTCGGCGGTCCCGGAGGAAGGCCCCAAAGATCTCCGCTGTCCTCTCTGCCTCTATCACACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp CTCAGAACTGTTCAGCTGCAAGGGAGCAGGAGGCCGAGGGGAATCTaGGAGCCCTTCAGCCCCTCTCATCATTGCAGCTGTGGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: LRTVQLQGSRRPRGI*EPFSPSHHCSCGRS
Trigger: GCTCCTCCCACAGCTGCAATGATGAGAGGGGCTGAAGGGCTCCAAGATTCCCCTCGGCCTCCTGCTCCCTTGCAGCTGAACAGTTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 72 bp AGGTGGAGTTCTGGAAGCGGGGGCCGCTGCCTAGGATaGCGAAGTCCCTCTTTAAGTCCCTGCTGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: RWSSGSGGRCLG*RSPSLSPCCGG
Trigger: ACCACCACAGCAGGGACTTAAAGAGGGACTTCGTCATCCTAGGCAGCGGCCCCCGCTTCCAGAACTCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp AGCCACAGGCGTGGACGTCGCCATGCTCTTGGGAGCTaGATTCAAAATCTCCCGCAGGGTCTGGGACTCAGC +
Preference number: 6 (lower is better)
Translates to: SHRRGRRHALGS*IQNLPQGLGLS
Trigger: GCTGAGTCCCAGACCCTGCGGGAGATTTTGAATTCAGCTCCCAAGAGCATGGCGACGTCCACGCCTGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 72 bp TTCCGGTCACAGAGGCTTCGGATGGTGGCTGTGTGCTaGCTGATCACATCGGCATTGGCCTTGAAGTCCCGG +
Preference number: 6 (lower is better)
Translates to: FRSQRLRMVAVC*LITSALALKSR
Trigger: CCGGGACTTCAAGGCCAATGCCGATGTGATCAGGCAGCACACAGCCACCATCCGAAGCCTCTGTGACCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 72 bp TCAACAACCTCTGCCGGCAGTTCCTTGCAGGGGTCCTaGAGTGACACAGGTGGAACCAGAGGGTCTGGCAGT +
Preference number: 6 (lower is better)
Translates to: STTSAGSSLQGS*SDTGGTRGSGS
Trigger: ACTGCCAGACCCTCTGGTTCCACCTGTGTCACTGCAGGACCCCTGCAAGGAACTGCCGGCAGAGGTTGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp TTCTGGGCCTCACTAGCGTCTCTGGCCCAGATCTGTTaGGCTGAAAAGGCAGTGGGCACCTCCATGATGGGG +
Preference number: 6 (lower is better)
Translates to: FWASLASLAQIC*AEKAVGTSMMG
Trigger: CCCCATCATGGAGGTGCCCACTGCCTTTTCAGCCCAACAGATCTGGGCCAGAGACGCTAGTGAGGCCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 90 bp CCAGGCCCCCGGTCTGCAAATCTCATCAGCTCTCTGTCCTCAGCCTaGCTGCTCATTTCGTCGTCCTTGTCCTCGTCCTCGCTGCTGGAA +
Preference number: 6 (lower is better)
Translates to: PGPRSANLISSLSSA*LLISSSLSSSSLLE
Trigger: TTCCAGCAGCGAGGACGAGGACAAGGACGACGAAATGAGCAGCAAGGCTGAGGACAGAGAGCTGATGAGATTTGCAGACCGGGGGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp CATTTGATGCAGCGGAACGGGAGCCACTCGATGTCTTaGGCTTCGCCTTCCACCTCGGCCCTCTCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: HLMQRNGSHSMS*ASPSTSALSKL
Trigger: CAGCTTTGAGAGGGCCGAGGTGGAAGGCGAAGCTCAAGACATCGAGTGGCTCCCGTTCCGCTGCATCAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 72 bp TGGTTCCGGTCACAGAGGCTTCGGATGGTGGCTGTGTaGTGCCTGATCACATCGGCATTGGCCTTGAAGTCC +
Preference number: 6 (lower is better)
Translates to: WFRSQRLRMVAV*CLITSALALKS
Trigger: GGACTTCAAGGCCAATGCCGATGTGATCAGGCAGCACACAGCCACCATCCGAAGCCTCTGTGACCGGAACCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 72 bp GATGGTCCTGGAGGCCGCAAGGCAGTGGGTGTAATATaGATCAATGTCGTGGCGCTTCTGGTAGTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: DGPGGRKAVGVI*INVVALLVVGC
Trigger: GCAGCCCACTACCAGAAGCGCCACGACATTGATGCATATTACACCCACTGCCTTGCGGCCTCCAGGACCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp GCCGGGACGCTACCATACTGGACATGTTTCCGGAGGTaGTTACAGATGGCCCGAAGCGTTGGATGCACTTCC +
Preference number: 6 (lower is better)
Translates to: AGTLPYWTCFRR*LQMARSVGCTS
Trigger: GGAAGTGCATCCAACGCTTCGGGCCATCTGTAACCACCTCCGGAAACATGTCCAGTATGGTAGCGTCCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp TTCACAGCAGCCGACACAGCCGGGACGCTACCATACTaGACATGTTTCCGGAGGTGGTTACAGATGGCCCGA +
Preference number: 6 (lower is better)
Translates to: FTAADTAGTLPY*TCFRRWLQMAR
Trigger: TCGGGCCATCTGTAACCACCTCCGGAAACATGTCCAGTATGGTAGCGTCCCGGCTGTGTCGGCTGCTGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp CCAGGTGGCTCCTCTCATGAGAACGCAGCCCCTGCATaGACATCAGGACCCGGTCACATTGACTGCAATGGT +
Preference number: 6 (lower is better)
Translates to: PGGSSHENAAPA*TSGPGHIDCNG
Trigger: ACCATTGCAGTCAATGTGACCGGGTCCTGATGTCCATGCAGGGGCTGCGTTCTCATGAGAGGAGCCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
CDS CAA 72 bp TCTTTGGGTGGGGATGGGATGATCACCTTGTTGGGCTaGTCACTGATGGTCCTGGAGGCCGCAAGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: SLGGDGMITLLG*SLMVLEAARQW
Trigger: CCACTGCCTTGCGGCCTCCAGGACCATCAGTGACAAGCCCAACAAGGTGATCATCCCATCCCCACCCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 72 bp GCATTTGATGCAGCGGAACGGGAGCCACTCGATGTCTaGAGCTTCGCCTTCCACCTCGGCCCTCTCAAAGCT +
Preference number: 6 (lower is better)
Translates to: AFDAAEREPLDV*SFAFHLGPLKA
Trigger: AGCTTTGAGAGGGCCGAGGTGGAAGGCGAAGCTCAAGACATCGAGTGGCTCCCGTTCCGCTGCATCAAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 72 bp TGCATGCACAGCAACTCCGCCGTGCTGAAGGACAGCTaGAAGCATTTGATGCAGCGGAACGGGAGCCACTCG +
Preference number: 6 (lower is better)
Translates to: CMHSNSAVLKDS*KHLMQRNGSHS
Trigger: CGAGTGGCTCCCGTTCCGCTGCATCAAATGCTTCAAGCTGTCCTTCAGCACGGCGGAGTTGCTGTGCATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 72 bp AAGATGCTGCGCTCAACAACCTCTGCCGGCAGTTCCTaGCAGGGGTCCTGCAGTGACACAGGTGGAACCAGA +
Preference number: 6 (lower is better)
Translates to: KMLRSTTSAGSS*QGSCSDTGGTR
Trigger: TCTGGTTCCACCTGTGTCACTGCAGGACCCCTGCAAGGAACTGCCGGCAGAGGTTGTTGAGCGCAGCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp TTGCCCATGGAGCCCCTGAAATTGGAGACGTTAGCGTaGGGCATCTCCCGGCTCGCAGCATTCATGGACAGG +
Preference number: 6 (lower is better)
Translates to: LPMEPLKLETLA*GISRLAAFMDR
Trigger: CCTGTCCATGAATGCTGCGAGCCGGGAGATGCCCAACGCTAACGTCTCCAATTTCAGGGGCTCCATGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 90 bp CAGCTTGAAGCATTTGATGCAGCGGAACGGGAGCCACTCGATGTCTaGAGCTTCGCCTTCCACCTCGGCCCTCTCAAAGCTGCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: QLEAFDAAEREPLDV*SFAFHLGPLKAASL
Trigger: GAGAGAAGCAGCTTTGAGAGGGCCGAGGTGGAAGGCGAAGCTCAAGACATCGAGTGGCTCCCGTTCCGCTGCATCAAATGCTTCAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp GAGGAGAGGAGACTGACAATCCGTGGCCGGGGAAGGGTCAGGGCTTaGCCATGGACCTTGAGGGAATGTTCCTTCAACTGGCTGATTGTC +
Preference number: 6 (lower is better)
Translates to: EERRLTIRGRGRVRA*PWTLRECSFNWLIV
Trigger: GACAATCAGCCAGTTGAAGGAACATTCCCTCAAGGTCCATGGCAAAGCCCTGACCCTTCCCCGGCCACGGATTGTCAGTCTCCTCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp ATAGATTCTAAGATGCTGCGCTCAACAACCTCTGCCGGCAGTTCCTaGCAGGGGTCCTGCAGTGACACAGGTGGAACCAGAGGGTCTGGC +
Preference number: 6 (lower is better)
Translates to: IDSKMLRSTTSAGSS*QGSCSDTGGTRGSG
Trigger: GCCAGACCCTCTGGTTCCACCTGTGTCACTGCAGGACCCCTGCAAGGAACTGCCGGCAGAGGTTGTTGAGCGCAGCATCTTAGAATCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 72 bp ATATGCATCAATGTCGTGGCGCTTCTGGTAGTGGGCTaGCAGTCCCTTGCGGATGGGGTTGGTGTAGGCACA +
Preference number: 6 (lower is better)
Translates to: ICINVVALLVVG*QSLADGVGVGT
Trigger: TGTGCCTACACCAACCCCATCCGCAAGGGACTGGCAGCCCACTACCAGAAGCGCCACGACATTGATGCATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp GGTCTGGCAGTGGAGCAGGGGCAGGTGGTGGCGCTGTaGACTCCTTCAGACTGTTTTTGTGGTACATCTTCT +
Preference number: 6 (lower is better)
Translates to: GLAVEQGQVVAL*TPSDCFCGTSS
Trigger: AGAAGATGTACCACAAAAACAGTCTGAAGGAGTCCACAGCGCCACCACCTGCCCCTGCTCCACTGCCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp CCCGGCTCGCAGCATTCATGGACAGGTAGGTGGAGTTaGAGGTGGGGCTGGGTTCATTATCATTCTGCGCTT +
Preference number: 6 (lower is better)
Translates to: PGSQHSWTGRWS*RWGWVHYHSAL
Trigger: AAGCGCAGAATGATAATGAACCCAGCCCCACCTCCAACTCCACCTACCTGTCCATGAATGCTGCGAGCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp GGAGAGTCATCTTTGGGTGGGGATGGGATGATCACCTaGTTGGGCTTGTCACTGATGGTCCTGGAGGCCGCA +
Preference number: 6 (lower is better)
Translates to: GESSLGGDGMIT*LGLSLMVLEAA
Trigger: TGCGGCCTCCAGGACCATCAGTGACAAGCCCAACAAGGTGATCATCCCATCCCCACCCAAAGATGACTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 72 bp AGACTGACAATCCGTGGCCGGGGAAGGGTCAGGGCTTaGCCATGGACCTTGAGGGAATGTTCCTTCAACTGG +
Preference number: 6 (lower is better)
Translates to: RLTIRGRGRVRA*PWTLRECSFNW
Trigger: CCAGTTGAAGGAACATTCCCTCAAGGTCCATGGCAAAGCCCTGACCCTTCCCCGGCCACGGATTGTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp GCTTCTTCCCACCGTGCTTGTCCCGGTAATGGCGCCTaGTGCTCTGGATGTAGCCAGAGGAGAATTCACAGA +
Preference number: 6 (lower is better)
Translates to: ASSHRACPGNGA*CSGCSQRRIHR
Trigger: TCTGTGAATTCTCCTCTGGCTACATCCAGAGCATCAGGCGCCATTACCGGGACAAGCACGGTGGGAAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp CCTTGGTCTCTAACAGCTTGTTGCCATCAGAGCCCATaGGCTGCTCTGCAGACAGTCCTGACGCCTGGTGAT +
Preference number: 6 (lower is better)
Translates to: PWSLTACCHQSP*AALQTVLTPGD
Trigger: ATCACCAGGCGTCAGGACTGTCTGCAGAGCAGCTCATGGGCTCTGATGGCAACAAGCTGTTAGAGACCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 72 bp CGGAGATCTTTGGGGCCTTCCTCCGGGACCGCCGAATaGCCAGCTTCCACGTGCATAGTAAAAGCAGATTTA +
Preference number: 6 (lower is better)
Translates to: RRSLGPSSGTAE*PASTCIVKADL
Trigger: TAAATCTGCTTTTACTATGCACGTGGAAGCTGGGCATTCGGCGGTCCCGGAGGAAGGCCCCAAAGATCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 72 bp CTGCAAATCTCATCAGCTCTCTGTCCTCAGCCTTGCTaGTCATTTCGTCGTCCTTGTCCTCGTCCTCGCTGC +
Preference number: 6 (lower is better)
Translates to: LQISSALCPQPC*SFRRPCPRPRC
Trigger: GCAGCGAGGACGAGGACAAGGACGACGAAATGAGCAGCAAGGCTGAGGACAGAGAGCTGATGAGATTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 72 bp GGTCTGCAAATCTCATCAGCTCTCTGTCCTCAGCCTTaGTGCTCATTTCGTCGTCCTTGTCCTCGTCCTCGC +
Preference number: 6 (lower is better)
Translates to: GLQISSALCPQP*CSFRRPCPRPR
Trigger: GCGAGGACGAGGACAAGGACGACGAAATGAGCAGCAAGGCTGAGGACAGAGAGCTGATGAGATTTGCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp ACAATCCGTGGCCGGGGAAGGGTCAGGGCTTTGCCATaGACCTTGAGGGAATGTTCCTTCAACTGGCTGATT +
Preference number: 6 (lower is better)
Translates to: TIRGRGRVRALP*TLRECSFNWLI
Trigger: AATCAGCCAGTTGAAGGAACATTCCCTCAAGGTCCATGGCAAAGCCCTGACCCTTCCCCGGCCACGGATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp GCATCTCCCGGCTCGCAGCATTCATGGACAGGTAGGTaGAGTTGGAGGTGGGGCTGGGTTCATTATCATTCT +
Preference number: 6 (lower is better)
Translates to: ASPGSQHSWTGR*SWRWGWVHYHS
Trigger: AGAATGATAATGAACCCAGCCCCACCTCCAACTCCACCTACCTGTCCATGAATGCTGCGAGCCGGGAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp AAAGGTCTTGGGAGGAGTGTTTTTGTTAAACGTAGCTaGCAAGCCACCACCGCGAGCCACAGGCGTGGACGT +
Preference number: 6 (lower is better)
Translates to: KGLGRSVFVKRS*QATTASHRRGR
Trigger: ACGTCCACGCCTGTGGCTCGCGGTGGTGGCTTGCCAGCTACGTTTAACAAAAACACTCCTCCCAAGACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp CGGTCTGCAAATCTCATCAGCTCTCTGTCCTCAGCCTaGCTGCTCATTTCGTCGTCCTTGTCCTCGTCCTCG +
Preference number: 6 (lower is better)
Translates to: RSANLISSLSSA*LLISSSLSSSS
Trigger: CGAGGACGAGGACAAGGACGACGAAATGAGCAGCAAGGCTGAGGACAGAGAGCTGATGAGATTTGCAGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp GAGGTATACGAGCACTGCCTACATTTGAGCGCTCGAAGTTTCGTTTaGTCCCGCTCCATACCGGAAGCAGGGAGAAGCACACAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: EVYEHCLHLSARSFV*SRSIPEAGRSTQLA
Trigger: TGCCAGCTGTGTGCTTCTCCCTGCTTCCGGTATGGAGCGGGACAAAACGAAACTTCGAGCGCTCAAATGTAGGCAGTGCTCGTATACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp GAGCAGAGTTTGCAGCGGAACGGTTTGTGGTGTCCGTaGTGGGTCTGCATATGGCGATCCAAGTTGTGTCTG +
Preference number: 6 (lower is better)
Translates to: EQSLQRNGLWCP*WVCIWRSKLCL
Trigger: CAGACACAACTTGGATCGCCATATGCAGACCCATCACGGACACCACAAACCGTTCCGCTGCAAACTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp CCTGGGACAGGAGGTCCTGTGGGACTCTCTTCAGCTTaGGCTCCATGGACCTTCCTAGTATGTTCTATGAGG +
Preference number: 6 (lower is better)
Translates to: PGTGGPVGLSSA*APWTFLVCSMR
Trigger: CCTCATAGAACATACTAGGAAGGTCCATGGAGCTCAAGCTGAAGAGAGTCCCACAGGACCTCCTGTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 72 bp CGATCTCCGCCCCATTGGTGGCAGTGTAATCATGAGTaGTACTTCTGTAGTTGGGCTCCTTCTGGGCCTCAC +
Preference number: 6 (lower is better)
Translates to: RSPPHWWQCNHE*YFCSWAPSGPH
Trigger: GTGAGGCCCAGAAGGAGCCCAACTACAGAAGTATCACTCATGATTACACTGCCACCAATGGGGCGGAGATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 72 bp TCATTCTGGGATATGTCAGCAGACTGCTCCACATCATaGACAAAGTCCTCAGCGGTCACCTTGATGGCCGGG +
Preference number: 6 (lower is better)
Translates to: SFWDMSADCSTS*TKSSAVTLMAG
Trigger: CCCGGCCATCAAGGTGACCGCTGAGGACTTTGTGCATGATGTGGAGCAGTCTGCTGACATATCCCAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 72 bp GTCTCCTCCACGTCATTCTGGGATATGTCAGCAGACTaGTCCACATCATGCACAAAGTCCTCAGCGGTCACC +
Preference number: 6 (lower is better)
Translates to: VSSTSFWDMSAD*STSCTKSSAVT
Trigger: GGTGACCGCTGAGGACTTTGTGCATGATGTGGAGCAGTCTGCTGACATATCCCAGAATGACGTGGAGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 72 bp GGAGAATTCACAGAATTCGCAGTGAAGAACGGCTTCTaGCTTCTGTTCCGTGCCAGCAGCAGTCCCAGAAGG +
Preference number: 6 (lower is better)
Translates to: GEFTEFAVKNGF*LLFRASSSPRR
Trigger: CCTTCTGGGACTGCTGCTGGCACGGAACAGAAGGCAGAAGCCGTTCTTCACTGCGAATTCTGTGAATTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 72 bp AGGGGAATCTTGGAGCCCTTCAGCCCCTCTCATCATTaGAGCTGTGGGAGGAGCCTGTCTGATATATTTGGC +
Preference number: 6 (lower is better)
Translates to: RGILEPFSPSHH*SCGRSLSDIFG
Trigger: GCCAAATATATCAGACAGGCTCCTCCCACAGCTGCAATGATGAGAGGGGCTGAAGGGCTCCAAGATTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp CAGGGTGTCTCCTCTGATAATGCAGGAGCAAACCACTaGGCTCCATGTGGGAGTAGATACACCACTCGCAGT +
Preference number: 6 (lower is better)
Translates to: QGVSSDNAGANH*APCGSRYTTRS
Trigger: ACTGCGAGTGGTGTATCTACTCCCACATGGAGCCCAGTGGTTTGCTCCTGCATTATCAGAGGAGACACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp CTCGCTCAGCTGAGGAGAGTCATCTTTGGGTGGGGATaGGATGATCACCTTGTTGGGCTTGTCACTGATGGT +
Preference number: 6 (lower is better)
Translates to: LAQLRRVIFGWG*DDHLVGLVTDG
Trigger: ACCATCAGTGACAAGCCCAACAAGGTGATCATCCCATCCCCACCCAAAGATGACTCTCCTCAGCTGAGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp GAGTTCCTCGCTCAGCTGAGGAGAGTCATCTTTGGGTaGGGATGGGATGATCACCTTGTTGGGCTTGTCACT +
Preference number: 6 (lower is better)
Translates to: EFLAQLRRVIFG*GWDDHLVGLVT
Trigger: AGTGACAAGCCCAACAAGGTGATCATCCCATCCCCACCCAAAGATGACTCTCCTCAGCTGAGCGAGGAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp CTATCCCAATTGGCTCATCGTCTTCCTTGGCCTCTATaGAGGGCAGCTGCATACTCTCCTCCACCATCTCCT +
Preference number: 6 (lower is better)
Translates to: LSQLAHRLPWPL*RAAAYSPPPSP
Trigger: AGGAGATGGTGGAGGAGAGTATGCAGCTGCCCTCCATAGAGGCCAAGGAAGACGATGAGCCAATTGGGATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp CTCTTGGGAGCTGAATTCAAAATCTCCCGCAGGGTCTaGGACTCAGCATTCAGCCCTTCCTGCTGCTCTACA +
Preference number: 6 (lower is better)
Translates to: LLGAEFKISRRV*DSAFSPSCCST
Trigger: TGTAGAGCAGCAGGAAGGGCTGAATGCTGAGTCCCAGACCCTGCGGGAGATTTTGAATTCAGCTCCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp GAGCACTGCCTACATTTGAGCGCTCGAAGTTTCGTTTaGTCCCGCTCCATACCGGAAGCAGGGAGAAGCACA +
Preference number: 6 (lower is better)
Translates to: EHCLHLSARSFV*SRSIPEAGRST
Trigger: TGTGCTTCTCCCTGCTTCCGGTATGGAGCGGGACAAAACGAAACTTCGAGCGCTCAAATGTAGGCAGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 72 bp AGACTCATCACCATTCATGGCCCAGGGGTGGAACGCTaGGTAATGGTTTGTGATGTCCCAGATGGAGACGGC +
Preference number: 6 (lower is better)
Translates to: RLITIHGPGVER*VMVCDVPDGDG
Trigger: GCCGTCTCCATCTGGGACATCACAAACCATTACCAAGCGTTCCACCCCTGGGCCATGAATGGTGATGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp CTGACAATCCGTGGCCGGGGAAGGGTCAGGGCTTTGCCATGGACCTaGAGGGAATGTTCCTTCAACTGGCTGATTGTCATGGTGGAAAAT +
Preference number: 6 (lower is better)
Translates to: LTIRGRGRVRALPWT*RECSFNWLIVMVEN
Trigger: ATTTTCCACCATGACAATCAGCCAGTTGAAGGAACATTCCCTCAAGGTCCATGGCAAAGCCCTGACCCTTCCCCGGCCACGGATTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp GAAGAATTAGGTCTCATGATGGAGTTGCCCATGGAGCCCCTGAAATaGGAGACGTTAGCGTTGGGCATCTCCCGGCTCGCAGCATTCATG +
Preference number: 6 (lower is better)
Translates to: EELGLMMELPMEPLK*ETLALGISRLAAFM
Trigger: CATGAATGCTGCGAGCCGGGAGATGCCCAACGCTAACGTCTCCAATTTCAGGGGCTCCATGGGCAACTCCATCATGAGACCTAATTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 72 bp TCACTTTCATACCAGGATGCTTCTTCCCGTAATGGGTaGGGAGGCCGTGCAAGTTGTTGTACTCGGACTGGC +
Preference number: 6 (lower is better)
Translates to: SLSYQDASSRNG*GGRASCCTRTG
Trigger: GCCAGTCCGAGTACAACAACTTGCACGGCCTCCTCACCCATTACGGGAAGAAGCATCCTGGTATGAAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp TCTGATAGTGGGTCAGGACGCCATGGATGCGAGTGTTaGTGTACGGACAATGCCTGCATTTGTAGACGGCAC +
Preference number: 6 (lower is better)
Translates to: SDSGSGRHGCEC*CTDNACICRRH
Trigger: GTGCCGTCTACAAATGCAGGCATTGTCCGTACATCAACACTCGCATCCATGGCGTCCTGACCCACTATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp GTGTCTCAACACGTGTCTTTCCCACTCAGAGCCCTGTaGGAACGCCCGTCCACAGAATTCACATGGAAATCG +
Preference number: 6 (lower is better)
Translates to: VSQHVSFPLRAL*ERPSTEFTWKS
Trigger: CGATTTCCATGTGAATTCTGTGGACGGGCGTTCTCACAGGGCTCTGAGTGGGAAAGACACGTGTTGAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp CCCATGAGCTGCTCTGCAGACAGTCCTGACGCCTGGTaGTCCAGAACACTTAAACCATTCTCACTGTCTACC +
Preference number: 6 (lower is better)
Translates to: PMSCSADSPDAW*SRTLKPFSLST
Trigger: GGTAGACAGTGAGAATGGTTTAAGTGTTCTGGATCACCAGGCGTCAGGACTGTCTGCAGAGCAGCTCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 72 bp GTCAGCTCGGCTATGCTTTGCAATTTGCTATCACAGTaGTTACACTGGAAGGTGGAGTTCTGGAAGCGGGGG +
Preference number: 6 (lower is better)
Translates to: VSSAMLCNLLSQ*LHWKVEFWKRG
Trigger: CCCCCGCTTCCAGAACTCCACCTTCCAGTGTAAGCACTGTGATAGCAAATTGCAAAGCATAGCCGAGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 72 bp GCCCTTTCAGAGTCATGGTGGAATAACTACACATGGTaGACTTGTAAGGGTGCAAAGGTGGGGCCTGTGTGG +
Preference number: 6 (lower is better)
Translates to: ALSESWWNNYTW*TCKGAKVGPVW
Trigger: CCACACAGGCCCCACCTTTGCACCCTTACAAGTGCACCATGTGTAGTTATTCCACCATGACTCTGAAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp TGGGTGAGGAGGCCGTGCAAGTTGTTGTACTCGGACTaGCACACTGTACACTGGTATGGGGTGGAAGATATA +
Preference number: 6 (lower is better)
Translates to: WVRRPCKLLYSD*HTVHWYGVEDI
Trigger: TATATCTTCCACCCCATACCAGTGTACAGTGTGCCAGTCCGAGTACAACAACTTGCACGGCCTCCTCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp TCGCAGCATTCATGGACAGGTAGGTGGAGTTGGAGGTaGGGCTGGGTTCATTATCATTCTGCGCTTCAGAGA +
Preference number: 6 (lower is better)
Translates to: SQHSWTGRWSWR*GWVHYHSALQR
Trigger: TCTCTGAAGCGCAGAATGATAATGAACCCAGCCCCACCTCCAACTCCACCTACCTGTCCATGAATGCTGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp ACAGGGCCTATCAACTCTTCAGGTGCCAGGAGGGCCTaGTCTACACCGTCTTTCTCCTTGATGATATCCAGC +
Preference number: 6 (lower is better)
Translates to: TGPINSSGARRA*STPSFSLMISS
Trigger: GCTGGATATCATCAAGGAGAAAGACGGTGTAGACAAGGCCCTCCTGGCACCTGAAGAGTTGATAGGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 72 bp AAGGGAAAGTCTATCCCAATTGGCTCATCGTCTTCCTaGGCCTCTATGGAGGGCAGCTGCATACTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: KGKSIPIGSSSS*ASMEGSCILSS
Trigger: GGAGGAGAGTATGCAGCTGCCCTCCATAGAGGCCAAGGAAGACGATGAGCCAATTGGGATAGACTTTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 72 bp TCCTGGGACAGGAGGTCCTGTGGGACTCTCTTCAGCTaGAGCTCCATGGACCTTCCTAGTATGTTCTATGAG +
Preference number: 6 (lower is better)
Translates to: SWDRRSCGTLFS*SSMDLPSMFYE
Trigger: CTCATAGAACATACTAGGAAGGTCCATGGAGCTCAAGCTGAAGAGAGTCCCACAGGACCTCCTGTCCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 90 bp CAGATGGAGACGGCTTCAAAAACGCAGTCCCTGCATCTGTATGTTTaGGCTTCAGCTGACATGGTAAGAGTGGGAGAGGATGGGTCTGGC +
Preference number: 6 (lower is better)
Translates to: QMETASKTQSLHLYV*ASADMVRVGEDGSG
Trigger: GCCAGACCCATCCTCTCCCACTCTTACCATGTCAGCTGAAGCCAAAACATACAGATGCAGGGACTGCGTTTTTGAAGCCGTCTCCATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp TCGCTCTTTAAGGGAAAGTCTATCCCAATTGGCTCATCGTCTTCCTaGGCCTCTATGGAGGGCAGCTGCATACTCTCCTCCACCATCTCC +
Preference number: 6 (lower is better)
Translates to: SLFKGKSIPIGSSSS*ASMEGSCILSSTIS
Trigger: GGAGATGGTGGAGGAGAGTATGCAGCTGCCCTCCATAGAGGCCAAGGAAGACGATGAGCCAATTGGGATAGACTTTCCCTTAAAGAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp TTCATGAACCTTCGAAATGGAATCCCCTTGGTCTCTAACAGCTTGTaGCCATCAGAGCCCATGAGCTGCTCTGCAGACAGTCCTGACGCC +
Preference number: 6 (lower is better)
Translates to: FMNLRNGIPLVSNSL*PSEPMSCSADSPDA
Trigger: GGCGTCAGGACTGTCTGCAGAGCAGCTCATGGGCTCTGATGGCAACAAGCTGTTAGAGACCAAGGGGATTCCATTTCGAAGGTTCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 90 bp CCGTCTCATTTTCCAGTGGTAGGCTCGAGGGCTGCCCCTCGAATTTaGGCAAGTTGTCGCAGAATGAATGTTTGTGCTGCTGATGGACTC +
Preference number: 6 (lower is better)
Translates to: PSHFPVVGSRAAPRI*ASCRRMNVCAADGL
Trigger: GAGTCCATCAGCAGCACAAACATTCATTCTGCGACAACTTGCCAAAATTCGAGGGGCAGCCCTCGAGCCTACCACTGGAAAATGAGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 90 bp TTCTGGCTTTCACATTCTGGAGTAAAGGTCTTGGGAGGAGTGTTTTaGTTAAACGTAGCTGGCAAGCCACCACCGCGAGCCACAGGCGTG +
Preference number: 6 (lower is better)
Translates to: FWLSHSGVKVLGGVF*LNVAGKPPPRATGV
Trigger: CACGCCTGTGGCTCGCGGTGGTGGCTTGCCAGCTACGTTTAACAAAAACACTCCTCCCAAGACCTTTACTCCAGAATGTGAAAGCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 90 bp AACTCTTCAGGTGCCAGGAGGGCCTTGTCTACACCGTCTTTCTCCTaGATGATATCCAGCAACACAGACTCATCACCATTCATGGCCCAG +
Preference number: 6 (lower is better)
Translates to: NSSGARRALSTPSFS*MISSNTDSSPFMAQ
Trigger: CTGGGCCATGAATGGTGATGAGTCTGTGTTGCTGGATATCATCAAGGAGAAAGACGGTGTAGACAAGGCCCTCCTGGCACCTGAAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp CATACTGGACATGTTTCCGGAGGTGGTTACAGATGGCCCGAAGCGTaGGATGCACTTCCACGCAGAATTTACACTTGTAGCCCACCACTT +
Preference number: 6 (lower is better)
Translates to: HTGHVSGGGYRWPEA*DALPRRIYTCSPPL
Trigger: AAGTGGTGGGCTACAAGTGTAAATTCTGCGTGGAAGTGCATCCAACGCTTCGGGCCATCTGTAACCACCTCCGGAAACATGTCCAGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp CTACACCACTCACAACAAAAGTTGCCCCGAGACTTGGTCAAAGGCTaGACCATAGATTCTAAGATGCTGCGCTCAACAACCTCTGCCGGC +
Preference number: 6 (lower is better)
Translates to: LHHSQQKLPRDLVKG*TIDSKMLRSTTSAG
Trigger: GCCGGCAGAGGTTGTTGAGCGCAGCATCTTAGAATCTATGGTCAAGCCTTTGACCAAGTCTCGGGGCAACTTTTGTTGTGAGTGGTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 72 bp GGATGTGTGTCTTCAACCGGCTGTTGTAGGAGGACTTaGAAGAGCAGAGTTTGCAGCGGAACGGTTTGTGGT +
Preference number: 6 (lower is better)
Translates to: GCVSSTGCCRRT*KSRVCSGTVCG
Trigger: ACCACAAACCGTTCCGCTGCAAACTCTGCTCTTTCAAGTCCTCCTACAACAGCCGGTTGAAGACACACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp AAGAGCCGTAGTAATCCTCTTCGTCTTCAGAAAGCGTaGGCTCGATCTCCGCCCCATTGGTGGCAGTGTAAT +
Preference number: 6 (lower is better)
Translates to: KSRSNPLRLQKA*ARSPPHWWQCN
Trigger: ATTACACTGCCACCAATGGGGCGGAGATCGAGCTCACGCTTTCTGAAGACGAAGAGGATTACTACGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 72 bp CAGGGCAGGGTGGTCTTTCTTGATATGCTTCCTCAGTaGATAGAAATAGGGGGAGGTATACGAGCACTGCCT +
Preference number: 6 (lower is better)
Translates to: QGRVVFLDMLPQ*IEIGGGIRALP
Trigger: AGGCAGTGCTCGTATACCTCCCCCTATTTCTATGCACTGAGGAAGCATATCAAGAAAGACCACCCTGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 72 bp TCATTCTGCGCTTCAGAGACATTAGGCCCTTCTTGCTaGCGGATGCTAGAAAGGATCTTGACCATACTGCGG +
Preference number: 6 (lower is better)
Translates to: SFCASETLGPSC*RMLERILTILR
Trigger: CCGCAGTATGGTCAAGATCCTTTCTAGCATCCGGCAGCAAGAAGGGCCTAATGTCTCTGAAGCGCAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 72 bp CTATCCGTCTCATTTTCCAGTGGTAGGCTCGAGGGCTaGCCCTCGAATTTTGGCAAGTTGTCGCAGAATGAA +
Preference number: 6 (lower is better)
Translates to: LSVSFSSGRLEG*PSNFGKLSQNE
Trigger: TTCATTCTGCGACAACTTGCCAAAATTCGAGGGGCAGCCCTCGAGCCTACCACTGGAAAATGAGACGGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp AGCTGTTTCCTCCTCTCCTGGCGTTTGGCACGCTTCTaGAATTCCTCATTGTGGATGTTCAAGTGTGAGGTC +
Preference number: 6 (lower is better)
Translates to: SCFLLSWRLARF*NSSLWMFKCEV
Trigger: GACCTCACACTTGAACATCCACAATGAGGAATTCCAGAAGCGTGCCAAACGCCAGGAGAGGAGGAAACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp ATGTTTCCGGAGGTGGTTACAGATGGCCCGAAGCGTTaGATGCACTTCCACGCAGAATTTACACTTGTAGCC +
Preference number: 6 (lower is better)
Translates to: MFPEVVTDGPKR*MHFHAEFTLVA
Trigger: GGCTACAAGTGTAAATTCTGCGTGGAAGTGCATCCAACGCTTCGGGCCATCTGTAACCACCTCCGGAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp TACCATACTGGACATGTTTCCGGAGGTGGTTACAGATaGCCCGAAGCGTTGGATGCACTTCCACGCAGAATT +
Preference number: 6 (lower is better)
Translates to: YHTGHVSGGGYR*PEALDALPRRI
Trigger: AATTCTGCGTGGAAGTGCATCCAACGCTTCGGGCCATCTGTAACCACCTCCGGAAACATGTCCAGTATGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp TTTGGGATTAGGGGTAATATGCTGACCGTAATATCCTaGACTGTGGCCATAGTAACCTCCGCTCCCCAACGC +
Preference number: 6 (lower is better)
Translates to: FGIRGNMLTVIS*TVAIVTSAPQR
Trigger: GCGTTGGGGAGCGGAGGTTACTATGGCCACAGTCCAGGATATTACGGTCAGCATATTACCCCTAATCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp GAGCCTCTGTCCACAGACACCATGCGCATGGTTTTCTaGATCCTAAAGTACGAGGCCTTTTCTTCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: EPLSTDTMRMVF*ILKYEAFSSGC
Trigger: ACACCCTGAAGAAAAGGCCTCGTACTTTAGGATCCAGAAAACCATGCGCATGGTGTCTGTGGACAGAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp TTGGGAGACATTGGAGCACCCACCTCAAATGATAATTaGGAAAGGGCAGAGCCTCTGTCCACAGACACCATG +
Preference number: 6 (lower is better)
Translates to: LGDIGAPTSNDN*ERAEPLSTDTM
Trigger: CATGGTGTCTGTGGACAGAGGCTCTGCCCTTTCCCAATTATCATTTGAGGTGGGTGCTCCAATGTCTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp GGTGCCAGGAGGGCCTTGTCTACACCGTCTTTCTCCTaGATGATATCCAGCAACACAGACTCATCACCATTC +
Preference number: 6 (lower is better)
Translates to: GARRALSTPSFS*MISSNTDSSPF
Trigger: GAATGGTGATGAGTCTGTGTTGCTGGATATCATCAAGGAGAAAGACGGTGTAGACAAGGCCCTCCTGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 72 bp CATGTTTCCGGAGGTGGTTACAGATGGCCCGAAGCGTaGGATGCACTTCCACGCAGAATTTACACTTGTAGC +
Preference number: 6 (lower is better)
Translates to: HVSGGGYRWPEA*DALPRRIYTCS
Trigger: GCTACAAGTGTAAATTCTGCGTGGAAGTGCATCCAACGCTTCGGGCCATCTGTAACCACCTCCGGAAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 72 bp GACTGTGGCCATAGTAACCTCCGCTCCCCAACGCAGTaGCACTTTGACCTGGTAAATCCTCTGCAATCACAA +
Preference number: 6 (lower is better)
Translates to: DCGHSNLRSPTQ*HFDLVNPLQSQ
Trigger: TTGTGATTGCAGAGGATTTACCAGGTCAAAGTGCAACTGCGTTGGGGAGCGGAGGTTACTATGGCCACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098070.10
ENSMUST00000133895.8
CDS CAA 72 bp TTTCCAGTGGTAGGCTCGAGGGCTGCCCCTCGAATTTaGGCAAGTTGTCGCAGAATGAATGTTTGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: FPVVGSRAAPRI*ASCRRMNVCAA
Trigger: AGCAGCACAAACATTCATTCTGCGACAACTTGCCAAAATTCGAGGGGCAGCCCTCGAGCCTACCACTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp TCACATTCTGGAGTAAAGGTCTTGGGAGGAGTGTTTTaGTTAAACGTAGCTGGCAAGCCACCACCGCGAGCC +
Preference number: 6 (lower is better)
Translates to: SHSGVKVLGGVF*LNVAGKPPPRA
Trigger: GGCTCGCGGTGGTGGCTTGCCAGCTACGTTTAACAAAAACACTCCTCCCAAGACCTTTACTCCAGAATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 90 bp TCACAATTCACAGGGCCTATCAACTCTTCAGGTGCCAGGAGGGCCTaGTCTACACCGTCTTTCTCCTTGATGATATCCAGCAACACAGAC +
Preference number: 6 (lower is better)
Translates to: SQFTGPINSSGARRA*STPSFSLMISSNTD
Trigger: GTCTGTGTTGCTGGATATCATCAAGGAGAAAGACGGTGTAGACAAGGCCCTCCTGGCACCTGAAGAGTTGATAGGCCCTGTGAATTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp TGTTTCCTCCTCTCCTGGCGTTTGGCACGCTTCTGGAATTCCTCATaGTGGATGTTCAAGTGTGAGGTCAGCTCGGCTATGCTTTGCAAT +
Preference number: 6 (lower is better)
Translates to: CFLLSWRLARFWNSS*WMFKCEVSSAMLCN
Trigger: ATTGCAAAGCATAGCCGAGCTGACCTCACACTTGAACATCCACAATGAGGAATTCCAGAAGCGTGCCAAACGCCAGGAGAGGAGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp TCCTCCTCATCGTCCTCGACGTTGATGATCGCGTCTTCCTGCAGTTaGGTCTGGTTGATTTTGCTCTGCAAATTGCTGGCTATCTCGTCA +
Preference number: 6 (lower is better)
Translates to: SSSSSSTLMIASSCS*VWLILLCKLLAISS
Trigger: TGACGAGATAGCCAGCAATTTGCAGAGCAAAATCAACCAGACCAAACTGCAGGAAGACGCGATCATCAACGTCGAGGACGATGAGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 72 bp AGAAATAGGGGGAGGTATACGAGCACTGCCTACATTTaGGCGCTCGAAGTTTCGTTTTGTCCCGCTCCATAC +
Preference number: 6 (lower is better)
Translates to: RNRGRYTSTAYI*ALEVSFCPAPY
Trigger: GTATGGAGCGGGACAAAACGAAACTTCGAGCGCTCAAATGTAGGCAGTGCTCGTATACCTCCCCCTATTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp ACGGACAATGCCTGCATTTGTAGACGGCACCTGGGTTaGTGTCAATATCCTGGGCAAAATCAGCAGCCTTCA +
Preference number: 6 (lower is better)
Translates to: TDNACICRRHLG*CQYPGQNQQPS
Trigger: TGAAGGCTGCTGATTTTGCCCAGGATATTGACATCAACCCAGGTGCCGTCTACAAATGCAGGCATTGTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp AAGAACACTTGTAGGCATGTTCACCAGCATGGGCTTTaGGGATGTGTGTCTTCAACCGGCTGTTGTAGGAGG +
Preference number: 6 (lower is better)
Translates to: KNTCRHVHQHGL*GCVSSTGCCRR
Trigger: CCTCCTACAACAGCCGGTTGAAGACACACATCCTCAAAGCCCATGCTGGTGAACATGCCTACAAGTGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp CTATGTGTTGCTGGAGACTCTCGTCACTGGAGCAGGTaGAGGTACACTTATCACAGCGGAAAACTACTCCCT +
Preference number: 6 (lower is better)
Translates to: LCVAGDSRHWSR*RYTYHSGKLLP
Trigger: AGGGAGTAGTTTTCCGCTGTGATAAGTGTACCTTCACCTGCTCCAGTGACGAGAGTCTCCAGCAACACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp ACCGACATCGGTAGATCAGGTCCGAATGGTCAAAGTTaGGTACATTCATGGCCTCTGGGTGGTGTTCACCAT +
Preference number: 6 (lower is better)
Translates to: TDIGRSGPNGQS*VHSWPLGGVHH
Trigger: ATGGTGAACACCACCCAGAGGCCATGAATGTACTCAACTTTGACCATTCGGACCTGATCTACCGATGTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp GCTTGCTCAAAAGCTGTTTCCTCCTCTCCTGGCGTTTaGCACGCTTCTGGAATTCCTCATTGTGGATGTTCA +
Preference number: 6 (lower is better)
Translates to: ACSKAVSSSPGV*HASGIPHCGCS
Trigger: TGAACATCCACAATGAGGAATTCCAGAAGCGTGCCAAACGCCAGGAGAGGAGGAAACAGCTTTTGAGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp GGCAGCTGCATACTCTCCTCCACCATCTCCTTTGTATaGATTTCGTTCCTGCTCACTTGGTTGGTATCATGC +
Preference number: 6 (lower is better)
Translates to: GSCILSSTISFV*ISFLLTWLVSC
Trigger: GCATGATACCAACCAAGTGAGCAGGAACGAAATCCATACAAAGGAGATGGTGGAGGAGAGTATGCAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp TTAGCCCTTTCAGAGTCATGGTGGAATAACTACACATaGTGCACTTGTAAGGGTGCAAAGGTGGGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: LALSESWWNNYT*CTCKGAKVGPV
Trigger: CACAGGCCCCACCTTTGCACCCTTACAAGTGCACCATGTGTAGTTATTCCACCATGACTCTGAAAGGGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp TGCTTGCTCAAAAGCTGTTTCCTCCTCTCCTGGCGTTaGGCACGCTTCTGGAATTCCTCATTGTGGATGTTC +
Preference number: 6 (lower is better)
Translates to: CLLKSCFLLSWR*ARFWNSSLWMF
Trigger: GAACATCCACAATGAGGAATTCCAGAAGCGTGCCAAACGCCAGGAGAGGAGGAAACAGCTTTTGAGCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 72 bp AATGCAGAAACAAAGGAGCAATACTGGCAGCTGTACTaGTCCTCTCTGGTAAACATGGCCAAGGCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: NAETKEQYWQLY*SSLVNMAKARW
Trigger: CCACCTGGCCTTGGCCATGTTTACCAGAGAGGACAAGTACAGCTGCCAGTATTGCTCCTTTGTTTCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 72 bp TGGAGGGCAGCTGCATACTCTCCTCCACCATCTCCTTaGTATGGATTTCGTTCCTGCTCACTTGGTTGGTAT +
Preference number: 6 (lower is better)
Translates to: WRAAAYSPPPSP*YGFRSCSLGWY
Trigger: ATACCAACCAAGTGAGCAGGAACGAAATCCATACAAAGGAGATGGTGGAGGAGAGTATGCAGCTGCCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 72 bp ATAGTGGCTCGTCATCATTGTCCTCGGCAACATCAGTaGGCTGTAAGAATGCCGTGTGGACATCCTGGATGT +
Preference number: 6 (lower is better)
Translates to: IVARHHCPRQHQ*AVRMPCGHPGC
Trigger: ACATCCAGGATGTCCACACGGCATTCTTACAGCCAACTGATGTTGCCGAGGACAATGATGACGAGCCACTAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098070.10
ENSMUST00000133895.8
CDS CAA 90 bp GCCGTGTGTGTAAGGACACAGCTTGCACCGGTAGGCACCATACCCTaGTTTAAAAATCCTACTTGTCTCCTCCACGTCATTCTGGGATAT +
Preference number: 6 (lower is better)
Translates to: AVCVRTQLAPVGTIP*FKNPTCLLHVILGY
Trigger: ATATCCCAGAATGACGTGGAGGAGACAAGTAGGATTTTTAAACAAGGGTATGGTGCCTACCGGTGCAAGCTGTGTCCTTACACACACGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp CACAGATGGTTACTGTTTCGCTCTTTAAGGGAAAGTCTATCCCAATaGGCTCATCGTCTTCCTTGGCCTCTATGGAGGGCAGCTGCATAC +
Preference number: 6 (lower is better)
Translates to: HRWLLFRSLRESLSQ*AHRLPWPLWRAAAY
Trigger: GTATGCAGCTGCCCTCCATAGAGGCCAAGGAAGACGATGAGCCAATTGGGATAGACTTTCCCTTAAAGAGCGAAACAGTAACCATCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp AATATCCTGGACTGTGGCCATAGTAACCTCCGCTCCCCAACGCAGTaGCACTTTGACCTGGTAAATCCTCTGCAATCACAAACTCATCCT +
Preference number: 6 (lower is better)
Translates to: NILDCGHSNLRSPTQ*HFDLVNPLQSQTHP
Trigger: AGGATGAGTTTGTGATTGCAGAGGATTTACCAGGTCAAAGTGCAACTGCGTTGGGGAGCGGAGGTTACTATGGCCACAGTCCAGGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098070.10
ENSMUST00000133895.8
CDS CAA 90 bp GCTGGGTTCATTATCATTCTGCGCTTCAGAGACATTAGGCCCTTCTaGCTGCCGGATGCTAGAAAGGATCTTGACCATACTGCGGTGTTT +
Preference number: 6 (lower is better)
Translates to: AGFIIILRFRDIRPF*LPDARKDLDHTAVF
Trigger: AAACACCGCAGTATGGTCAAGATCCTTTCTAGCATCCGGCAGCAAGAAGGGCCTAATGTCTCTGAAGCGCAGAATGATAATGAACCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 72 bp GTGTCTTTTCTGGTAGTGAACAAGCACCCCCACAACTaGCCGATTGCTGTAGGAGCAGTGTTTGCAGTAGTA +
Preference number: 6 (lower is better)
Translates to: VSFLVVNKHPHN*PIAVGAVFAVV
Trigger: TACTACTGCAAACACTGCTCCTACAGCAATCGGTCAGTTGTGGGGGTGCTTGTTCACTACCAGAAAAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 72 bp ATTTTCACAATTCACAGGGCCTATCAACTCTTCAGGTaGCAGGAGGGCCTTGTCTACACCGTCTTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: IFTIHRAYQLFR*QEGLVYTVFLL
Trigger: AAGGAGAAAGACGGTGTAGACAAGGCCCTCCTGGCACCTGAAGAGTTGATAGGCCCTGTGAATTGTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 72 bp TCCTCATCGTCCTCGACGTTGATGATCGCGTCTTCCTaGAGTTTGGTCTGGTTGATTTTGCTCTGCAAATTG +
Preference number: 6 (lower is better)
Translates to: SSSSSTLMIASS*SLVWLILLCKL
Trigger: CAATTTGCAGAGCAAAATCAACCAGACCAAACTGCAGGAAGACGCGATCATCAACGTCGAGGACGATGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp TGCAAGTTGTTGTACTCGGACTGGCACACTGTACACTaGTATGGGGTGGAAGATATAGCAGGGTTAGCTGAA +
Preference number: 6 (lower is better)
Translates to: CKLLYSDWHTVH*YGVEDIAGLAE
Trigger: TTCAGCTAACCCTGCTATATCTTCCACCCCATACCAGTGTACAGTGTGCCAGTCCGAGTACAACAACTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp GCAGCACTATGTGGTCGATCATGTTGCGTTTGTATTTaGTGTGATAGAGGCAGAGAGGACAGCGGAGATCTT +
Preference number: 6 (lower is better)
Translates to: AALCGRSCCVCI*CDRGREDSGDL
Trigger: AAGATCTCCGCTGTCCTCTCTGCCTCTATCACACCAAATACAAACGCAACATGATCGACCACATAGTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp GCAAGTATTTTGACAGTTTGGAACGGCACACTTCAATaGGGACAACTCGCTCTTCTCGGTGCAGCACTATGT +
Preference number: 6 (lower is better)
Translates to: ASILTVWNGTLQ*GQLALLGAALC
Trigger: ACATAGTGCTGCACCGAGAAGAGCGAGTTGTCCCCATTGAAGTGTGCCGTTCCAAACTGTCAAAATACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp CCTCCAGGAGAGATTTGTCGGCAGCCACTACACAGATaGTTACTGTTTCGCTCTTTAAGGGAAAGTCTATCC +
Preference number: 6 (lower is better)
Translates to: PPGEICRQPLHR*LLFRSLRESLS
Trigger: GGATAGACTTTCCCTTAAAGAGCGAAACAGTAACCATCTGTGTAGTGGCTGCCGACAAATCTCTCCTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp TATTATAATTTAAGGATCCTGGGACAGGAGGTCCTGTaGGACTCTCTTCAGCTTGAGCTCCATGGACCTTCC +
Preference number: 6 (lower is better)
Translates to: YYNLRILGQEVL*DSLQLELHGPS
Trigger: GGAAGGTCCATGGAGCTCAAGCTGAAGAGAGTCCCACAGGACCTCCTGTCCCAGGATCCTTAAATTATAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp GCTGCTGATGGACTCTTAGCCCTTTCAGAGTCATGGTaGAATAACTACACATGGTGCACTTGTAAGGGTGCA +
Preference number: 6 (lower is better)
Translates to: AADGLLALSESW*NNYTWCTCKGA
Trigger: TGCACCCTTACAAGTGCACCATGTGTAGTTATTCCACCATGACTCTGAAAGGGCTAAGAGTCCATCAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp TCGACGTTGATGATCGCGTCTTCCTGCAGTTTGGTCTaGTTGATTTTGCTCTGCAAATTGCTGGCTATCTCG +
Preference number: 6 (lower is better)
Translates to: STLMIASSCSLV*LILLCKLLAIS
Trigger: CGAGATAGCCAGCAATTTGCAGAGCAAAATCAACCAGACCAAACTGCAGGAAGACGCGATCATCAACGTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp GGGGTCCAAGATATACCTAAAGCTGAACTTAATGTATaGGTGCATTCGCTGGTAGTGGGTGCTAACACTCCG +
Preference number: 6 (lower is better)
Translates to: GVQDIPKAELNV*VHSLVVGANTP
Trigger: CGGAGTGTTAGCACCCACTACCAGCGAATGCACCCATACATTAAGTTCAGCTTTAGGTATATCTTGGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp GTCCGAATGGTCAAAGTTGAGTACATTCATGGCCTCTaGGTGGTGTTCACCATAATGCTGTTGGAGGTCTTC +
Preference number: 6 (lower is better)
Translates to: VRMVKVEYIHGL*VVFTIMLLEVF
Trigger: GAAGACCTCCAACAGCATTATGGTGAACACCACCCAGAGGCCATGAATGTACTCAACTTTGACCATTCGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp ACGGCTTCAAAAACGCAGTCCCTGCATCTGTATGTTTaGGCTTCAGCTGACATGGTAAGAGTGGGAGAGGAT +
Preference number: 6 (lower is better)
Translates to: TASKTQSLHLYV*ASADMVRVGED
Trigger: ATCCTCTCCCACTCTTACCATGTCAGCTGAAGCCAAAACATACAGATGCAGGGACTGCGTTTTTGAAGCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 72 bp TCAGCAGAGCCGCATTGGACACTTGATCTTTCATGCTaGCTGAAGAGCCGTAGTAATCCTCTTCGTCTTCAG +
Preference number: 6 (lower is better)
Translates to: SAEPHWTLDLSC*LKSRSNPLRLQ
Trigger: CTGAAGACGAAGAGGATTACTACGGCTCTTCAGCAAGCATGAAAGATCAAGTGTCCAATGCGGCTCTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 90 bp GCATATTTCTGCTTGCTCAAAAGCTGTTTCCTCCTCTCCTGGCGTTaGGCACGCTTCTGGAATTCCTCATTGTGGATGTTCAAGTGTGAG +
Preference number: 6 (lower is better)
Translates to: AYFCLLKSCFLLSWR*ARFWNSSLWMFKCE
Trigger: CTCACACTTGAACATCCACAATGAGGAATTCCAGAAGCGTGCCAAACGCCAGGAGAGGAGGAAACAGCTTTTGAGCAAGCAGAAATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp TCCTCCACCATCTCCTTTGTATGGATTTCGTTCCTGCTCACTTGGTaGGTATCATGCAATGACATGCCGTGTCTCAACACGTGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: SSTISFVWISFLLTW*VSCNDMPCLNTCLS
Trigger: GGAAAGACACGTGTTGAGACACGGCATGTCATTGCATGATACCAACCAAGTGAGCAGGAACGAAATCCATACAAAGGAGATGGTGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp AAGGGACACTGGAATCTATTCATGAACCTTCGAAATGGAATCCCCTaGGTCTCTAACAGCTTGTTGCCATCAGAGCCCATGAGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: KGHWNLFMNLRNGIP*VSNSLLPSEPMSCS
Trigger: AGAGCAGCTCATGGGCTCTGATGGCAACAAGCTGTTAGAGACCAAGGGGATTCCATTTCGAAGGTTCATGAATAGATTCCAGTGTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 90 bp CTCTCTTGTTTGAAATCTGCAAAAGCACCATCTGCATATTTCTGCTaGCTCAAAAGCTGTTTCCTCCTCTCCTGGCGTTTGGCACGCTTC +
Preference number: 6 (lower is better)
Translates to: LSCLKSAKAPSAYFC*LKSCFLLSWRLARF
Trigger: GAAGCGTGCCAAACGCCAGGAGAGGAGGAAACAGCTTTTGAGCAAGCAGAAATATGCAGATGGTGCTTTTGCAGATTTCAAACAAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 90 bp GAGCTGGCATTTGTACGGTTTCAGTTCATTGTGCTTTTCTATGTGTaGCTGGAGACTCTCGTCACTGGAGCAGGTGAAGGTACACTTATC +
Preference number: 6 (lower is better)
Translates to: ELAFVRFQFIVLFYV*LETLVTGAGEGTLI
Trigger: GATAAGTGTACCTTCACCTGCTCCAGTGACGAGAGTCTCCAGCAACACATAGAAAAGCACAATGAACTGAAACCGTACAAATGCCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp CCTCTCCGTCAAGTTCACAAGGCCAGAATTATGAGGTaGCTTCGGCTTCATCTGAGGGTAAGACATAGAAGA +
Preference number: 6 (lower is better)
Translates to: PLRQVHKARIMR*LRLHLRVRHRR
Trigger: TCTTCTATGTCTTACCCTCAGATGAAGCCGAAGTCACCTCATAATTCTGGCCTTGTGAACTTGACGGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 72 bp CAGAGCCGCATTGGACACTTGATCTTTCATGCTTGCTaGAGAGCCGTAGTAATCCTCTTCGTCTTCAGAAAG +
Preference number: 6 (lower is better)
Translates to: QSRIGHLIFHAC*RAVVILFVFRK
Trigger: CTTTCTGAAGACGAAGAGGATTACTACGGCTCTTCAGCAAGCATGAAAGATCAAGTGTCCAATGCGGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 72 bp TGGATGTTCAAGTGTGAGGTCAGCTCGGCTATGCTTTaGAATTTGCTATCACAGTGCTTACACTGGAAGGTG +
Preference number: 6 (lower is better)
Translates to: WMFKCEVSSAML*NLLSQCLHWKV
Trigger: CACCTTCCAGTGTAAGCACTGTGATAGCAAATTGCAAAGCATAGCCGAGCTGACCTCACACTTGAACATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 72 bp GTATGGATTTCGTTCCTGCTCACTTGGTTGGTATCATaGAATGACATGCCGTGTCTCAACACGTGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: VWISFLLTWLVS*NDMPCLNTCLS
Trigger: GGAAAGACACGTGTTGAGACACGGCATGTCATTGCATGATACCAACCAAGTGAGCAGGAACGAAATCCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 72 bp TCTCCTCCACCATCTCCTTTGTATGGATTTCGTTCCTaGTCACTTGGTTGGTATCATGCAATGACATGCCGT +
Preference number: 6 (lower is better)
Translates to: SPPPSPLYGFRS*SLGWYHAMTCR
Trigger: ACGGCATGTCATTGCATGATACCAACCAAGTGAGCAGGAACGAAATCCATACAAAGGAGATGGTGGAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS GCA 72 bp TTATCATTCTGCGCTTCAGAGACATTAGGCCCTTCTTaGTGCCGGATGCTAGAAAGGATCTTGACCATACTG +
Preference number: 6 (lower is better)
Translates to: LSFCASETLGPS*CRMLERILTIL
Trigger: CAGTATGGTCAAGATCCTTTCTAGCATCCGGCAGCAAGAAGGGCCTAATGTCTCTGAAGCGCAGAATGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 72 bp GCGTCTTCCTGCAGTTTGGTCTGGTTGATTTTGCTCTaGAAATTGCTGGCTATCTCGTCAATCCTTGTTCTC +
Preference number: 6 (lower is better)
Translates to: ASSCSLVWLILL*KLLAISSILVL
Trigger: GAGAACAAGGATTGACGAGATAGCCAGCAATTTGCAGAGCAAAATCAACCAGACCAAACTGCAGGAAGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 72 bp TGTTCAGCAGAGCCGCATTGGACACTTGATCTTTCATaGTTGCTGAAGAGCCGTAGTAATCCTCTTCGTCTT +
Preference number: 6 (lower is better)
Translates to: CSAEPHWTLDLS*LLKSRSNPLRL
Trigger: AAGACGAAGAGGATTACTACGGCTCTTCAGCAAGCATGAAAGATCAAGTGTCCAATGCGGCTCTGCTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp GCTTTGCCATGGACCTTGAGGGAATGTTCCTTCAACTaGCTGATTGTCATGGTGGAAAATGAGCACCAAGAA +
Preference number: 6 (lower is better)
Translates to: ALPWTLRECSFN*LIVMVENEHQE
Trigger: TTCTTGGTGCTCATTTTCCACCATGACAATCAGCCAGTTGAAGGAACATTCCCTCAAGGTCCATGGCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp TACGGTTTCAGTTCATTGTGCTTTTCTATGTGTTGCTaGAGACTCTCGTCACTGGAGCAGGTGAAGGTACAC +
Preference number: 6 (lower is better)
Translates to: YGFSSLCFSMCC*RLSSLEQVKVH
Trigger: GTGTACCTTCACCTGCTCCAGTGACGAGAGTCTCCAGCAACACATAGAAAAGCACAATGAACTGAAACCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp TGTGCTGCTGATGGACTCTTAGCCCTTTCAGAGTCATaGTGGAATAACTACACATGGTGCACTTGTAAGGGT +
Preference number: 6 (lower is better)
Translates to: CAADGLLALSES*WNNYTWCTCKG
Trigger: ACCCTTACAAGTGCACCATGTGTAGTTATTCCACCATGACTCTGAAAGGGCTAAGAGTCCATCAGCAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp TTACTGTTTCGCTCTTTAAGGGAAAGTCTATCCCAATaGGCTCATCGTCTTCCTTGGCCTCTATGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: LLFRSLRESLSQ*AHRLPWPLWRA
Trigger: TGCCCTCCATAGAGGCCAAGGAAGACGATGAGCCAATTGGGATAGACTTTCCCTTAAAGAGCGAAACAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 72 bp TCACAACAAAAGTTGCCCCGAGACTTGGTCAAAGGCTaGACCATAGATTCTAAGATGCTGCGCTCAACAACC +
Preference number: 6 (lower is better)
Translates to: SQQKLPRDLVKG*TIDSKMLRSTT
Trigger: GGTTGTTGAGCGCAGCATCTTAGAATCTATGGTCAAGCCTTTGACCAAGTCTCGGGGCAACTTTTGTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp CATTCCTTCATTCAACGAGGAAGACAGGCTTTCGCTTaGAGAATTCACAGTATCCCAATCCGACGTACCCGT +
Preference number: 6 (lower is better)
Translates to: HSFIQRGRQAFA*RIHSIPIRRTR
Trigger: ACGGGTACGTCGGATTGGGATACTGTGAATTCTCAAAGCGAAAGCCTGTCTTCCTCGTTGAATGAAGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 90 bp GTTGAGTACATTCATGGCCTCTGGGTGGTGTTCACCATAATGCTGTaGGAGGTCTTCAAAGTTGGTGTAGTCAATATAGCATTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: VEYIHGLWVVFTIML*EVFKVGVVNIAFQA
Trigger: TGCCTGGAATGCTATATTGACTACACCAACTTTGAAGACCTCCAACAGCATTATGGTGAACACCACCCAGAGGCCATGAATGTACTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 72 bp ACGCTTCTGGAATTCCTCATTGTGGATGTTCAAGTGTaGGGTCAGCTCGGCTATGCTTTGCAATTTGCTATC +
Preference number: 6 (lower is better)
Translates to: TLLEFLIVDVQV*GQLGYALQFAI
Trigger: GATAGCAAATTGCAAAGCATAGCCGAGCTGACCTCACACTTGAACATCCACAATGAGGAATTCCAGAAGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp ATGTTCCTTCAACTGGCTGATTGTCATGGTGGAAAATaGGCACCAAGAACACTTGTAGGCATGTTCACCAGC +
Preference number: 6 (lower is better)
Translates to: MFLQLADCHGGK*APRTLVGMFTS
Trigger: GCTGGTGAACATGCCTACAAGTGTTCTTGGTGCTCATTTTCCACCATGACAATCAGCCAGTTGAAGGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp TTTGGCAAGTTGTCGCAGAATGAATGTTTGTGCTGCTaGTGGACTCTTAGCCCTTTCAGAGTCATGGTGGAA +
Preference number: 6 (lower is better)
Translates to: FGKLSQNECLCC*WTLSPFRVMVE
Trigger: TTCCACCATGACTCTGAAAGGGCTAAGAGTCCATCAGCAGCACAAACATTCATTCTGCGACAACTTGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 72 bp AGCATTCAGCCCTTCCTGCTGCTCTACAACGTAGCTTaGAAAGATCATAGCATTGTTGATTTTCACCGTGGG +
Preference number: 6 (lower is better)
Translates to: SIQPFLLLYNVA*KDHSIVDFHRG
Trigger: CCCACGGTGAAAATCAACAATGCTATGATCTTTTCAAGCTACGTTGTAGAGCAGCAGGAAGGGCTGAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 72 bp GCAAACGTCACAATCGTAAACGACAACGGTGTTCACTaGAGGGTCCTTCTGGCTTTCACATTCTGGAGTAAA +
Preference number: 6 (lower is better)
Translates to: ANVTIVNDNGVH*RVLLAFTFWSK
Trigger: TTTACTCCAGAATGTGAAAGCCAGAAGGACCCTTCAGTGAACACCGTTGTCGTTTACGATTGTGACGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS GCA 72 bp CATTGTGGATGTTCAAGTGTGAGGTCAGCTCGGCTATaGTTTGCAATTTGCTATCACAGTGCTTACACTGGA +
Preference number: 6 (lower is better)
Translates to: HCGCSSVRSARL*FAICYHSAYTG
Trigger: TCCAGTGTAAGCACTGTGATAGCAAATTGCAAAGCATAGCCGAGCTGACCTCACACTTGAACATCCACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp GTTTCTTCTGATAGTGAACCAAGACAGAGTGCATGTTaGGGCTCGCAAACGAGCAAACGTCACAATCGTAAA +
Preference number: 6 (lower is better)
Translates to: VSSDSEPRQSAC*GSQTSKRHNRK
Trigger: TTTACGATTGTGACGTTTGCTCGTTTGCGAGCCCCAACATGCACTCTGTCTTGGTTCACTATCAGAAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CCA 72 bp AGCCTGTCTGATATATTTGGCAGTGACCTTTATTTCTaGGTGTCTTTTCTGGTAGTGAACAAGCACCCCCAC +
Preference number: 6 (lower is better)
Translates to: SLSDIFGSDLYF*VSFLVVNKHPH
Trigger: GTGGGGGTGCTTGTTCACTACCAGAAAAGACACCCAGAAATAAAGGTCACTGCCAAATATATCAGACAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp ATTATCATTCTGCGCTTCAGAGACATTAGGCCCTTCTaGCTGCCGGATGCTAGAAAGGATCTTGACCATACT +
Preference number: 6 (lower is better)
Translates to: IIILRFRDIRPF*LPDARKDLDHT
Trigger: AGTATGGTCAAGATCCTTTCTAGCATCCGGCAGCAAGAAGGGCCTAATGTCTCTGAAGCGCAGAATGATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp TGGAATCTATTCATGAACCTTCGAAATGGAATCCCCTaGGTCTCTAACAGCTTGTTGCCATCAGAGCCCATG +
Preference number: 6 (lower is better)
Translates to: WNLFMNLRNGIP*VSNSLLPSEPM
Trigger: CATGGGCTCTGATGGCAACAAGCTGTTAGAGACCAAGGGGATTCCATTTCGAAGGTTCATGAATAGATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS TCA 72 bp AACTCATCCTTTATAGAAGAGAACTCCACCTCTGTCTaGTTACTAGCATTCATGGACCCAGATAGTGGCTCG +
Preference number: 6 (lower is better)
Translates to: NSSFIEENSTSV*LLAFMDPDSGS
Trigger: CGAGCCACTATCTGGGTCCATGAATGCTAGTAATCAGACAGAGGTGGAGTTCTCTTCTATAAAGGATGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098070.10
ENSMUST00000133895.8
CDS GCA 72 bp GTGAAGGTACACTTATCACAGCGGAAAACTACTCCCTaGAAGTATTTTGACAGTTTGGAACGGCACACTTCA +
Preference number: 6 (lower is better)
Translates to: VKVHLSQRKTTP*KYFDSLERHTS
Trigger: TGAAGTGTGCCGTTCCAAACTGTCAAAATACTTGCAGGGAGTAGTTTTCCGCTGTGATAAGTGTACCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CCA 72 bp GGTGTTCACCATAATGCTGTTGGAGGTCTTCAAAGTTaGTGTAGTCAATATAGCATTCCAGGCACCTGTACA +
Preference number: 6 (lower is better)
Translates to: GVHHNAVGGLQS*CSQYSIPGTCT
Trigger: TGTACAGGTGCCTGGAATGCTATATTGACTACACCAACTTTGAAGACCTCCAACAGCATTATGGTGAACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp TTGAAATCTGCAAAAGCACCATCTGCATATTTCTGCTaGCTCAAAAGCTGTTTCCTCCTCTCCTGGCGTTTG +
Preference number: 6 (lower is better)
Translates to: LKSAKAPSAYFC*LKSCFLLSWRL
Trigger: CAAACGCCAGGAGAGGAGGAAACAGCTTTTGAGCAAGCAGAAATATGCAGATGGTGCTTTTGCAGATTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS CAA 72 bp ACTTATCACAGCGGAAAACTACTCCCTGCAAGTATTTaGACAGTTTGGAACGGCACACTTCAATGGGGACAA +
Preference number: 6 (lower is better)
Translates to: TYHSGKLLPASI*TVWNGTLQWGQ
Trigger: TTGTCCCCATTGAAGTGTGCCGTTCCAAACTGTCAAAATACTTGCAGGGAGTAGTTTTCCGCTGTGATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030131.12
ENSMUST00000079605.5
ENSMUST00000098070.10
CDS TCA 72 bp CATCTTCTGATGCTTAATTATCCTTGCCCTCCGAGGTaGTTTGTATGTGCAAAACTGGCAAGAAAAGACCTT +
Preference number: 6 (lower is better)
Translates to: HLLMLNYPCPPR*FVCAKLARKDL
Trigger: AAGGTCTTTTCTTGCCAGTTTTGCACATACAAATCACCTCGGAGGGCAAGGATAATTAAGCATCAGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp TTTTGCTCTGCAAATTGCTGGCTATCTCGTCAATCCTaGTTCTCTTCTTCACAGGTGATAAGTCAAGAGGAA +
Preference number: 6 (lower is better)
Translates to: FCSANCWLSRQS*FSSSQVISQEE
Trigger: TTCCTCTTGACTTATCACCTGTGAAGAAGAGAACAAGGATTGACGAGATAGCCAGCAATTTGCAGAGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 90 bp TTCACAGGTGATAAGTCAAGAGGAAAGTCACTAGCAAGCTTCCTATaGGCCTTAGCTACAAAGTTATTCTTGGAGGACAATCCAAGAATT +
Preference number: 6 (lower is better)
Translates to: FTGDKSRGKSLASFL*ALATKLFLEDNPRI
Trigger: AATTCTTGGATTGTCCTCCAAGAATAACTTTGTAGCTAAGGCCAATAGGAAGCTTGCTAGTGACTTTCCTCTTGACTTATCACCTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10
CDS CAA 72 bp GATAAGTCAAGAGGAAAGTCACTAGCAAGCTTCCTATaGGCCTTAGCTACAAAGTTATTCTTGGAGGACAAT +
Preference number: 6 (lower is better)
Translates to: DKSRGKSLASFL*ALATKLFLEDN
Trigger: ATTGTCCTCCAAGAATAACTTTGTAGCTAAGGCCAATAGGAAGCTTGCTAGTGACTTTCCTCTTGACTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098070.10