Pregenerated sensors for ZFP46 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051351Ensembl transcript IDs: ENSMUST00000069195.5, ENSMUST00000130223.8, ENSMUST00000130658.2, ENSMUST00000144217.8
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGCTTGTATGACTTCCGCAGCTCAGCACAGGGAGGGGAGCGGCTaGCCACAGCGGAGTGGACTGAGCTGGCACGGCCACTGCCTTTTA | + |
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Preference number: 1 (lower is better) Translates to: GACMTSAAQHREGSG*PQRSGLSWHGHCLL Trigger: TAAAAGGCAGTGGCCGTGCCAGCTCAGTCCACTCCGCTGTGGTCAGCCGCTCCCCTCCCTGTGCTGAGCTGCGGAAGTCATACAAGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR CCA 90 bp | AGTACCGACTGCTGTTCCCTGGGAAGAGTTCTGGGCTCCCTTCCCTaGGGCGGTCAGTTCACTTCCTACTTCCACTCCACCAGGACTTCC | + |
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Preference number: 1 (lower is better) Translates to: STDCCSLGRVLGSLP*GGQFTSYFHSTRTS Trigger: GGAAGTCCTGGTGGAGTGGAAGTAGGAAGTGAACTGACCGCCCCAGGGAAGGGAGCCCAGAACTCTTCCCAGGGAACAGCAGTCGGTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR GCA 90 bp | ACACACACACACACACACACACACTGGAAGTCCCAGCTCCCTGGGTaGCAACTCCTCTCCATCCCCTCGGGGCTGAATAAGCACCAACAT | + |
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Preference number: 1 (lower is better) Translates to: THTHTHTHWKSQLPG*QLLSIPSGLNKHQH Trigger: ATGTTGGTGCTTATTCAGCCCCGAGGGGATGGAGAGGAGTTGGCACCCAGGGAGCTGGGACTTCCAGTGTGTGTGTGTGTGTGTGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR TCA 90 bp | GCGTGTGTGTTAGTTTTAGGAACCGAGGAGGGAAACGGGGTGCAATaGAGCTGGGTCAGAGGGTCTGTCTTCTACAAGCCACTCCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: ACVLVLGTEEGNGVQ*SWVRGSVFYKPLPG Trigger: GCCTGGGAGTGGCTTGTAGAAGACAGACCCTCTGACCCAGCTTCATTGCACCCCGTTTCCCTCCTCGGTTCCTAAAACTAACACACACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR GCA 90 bp | CTCTTGCTGACGTCACCGCCCATGGGCCCTTGGTCCTTGAACCTGTaGCTCCAGTTTCCCGTTTCCTGTTACATTGTATCTTCGGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: LLLTSPPMGPWSLNL*LQFPVSCYIVSSVS Trigger: GCTGACCGAAGATACAATGTAACAGGAAACGGGAAACTGGAGGCACAGGTTCAAGGACCAAGGGCCCATGGGCGGTGACGTCAGCAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR GCA 90 bp | CCACTCTCCACAACCATAGAACACAGGCACAGACTGTCTGGTGTGTaGAGAAACGGCCAGGGACTTGCGAACAGAGGGCATGCACATAGC | + |
|
Preference number: 1 (lower is better) Translates to: PLSTTIEHRHRLSGV*RNGQGLANRGHAHS Trigger: GCTATGTGCATGCCCTCTGTTCGCAAGTCCCTGGCCGTTTCTGCACACACCAGACAGTCTGTGCCTGTGTTCTATGGTTGTGGAGAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR CCA 90 bp | TGCTCATCCACTCTCCACAACCATAGAACACAGGCACAGACTGTCTaGTGTGTGCAGAAACGGCCAGGGACTTGCGAACAGAGGGCATGC | + |
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Preference number: 1 (lower is better) Translates to: CSSTLHNHRTQAQTV*CVQKRPGTCEQRAC Trigger: GCATGCCCTCTGTTCGCAAGTCCCTGGCCGTTTCTGCACACACCAGACAGTCTGTGCCTGTGTTCTATGGTTGTGGAGAGTGGATGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR CCA 90 bp | GCCCTAGAGTTAGCAGTGCAGGGGCGAGTGATCTTAAAGGCTAGATaGCAAAGACCACAGTACCGACTGCTGTTCCCTGGGAAGAGTTCT | + |
|
Preference number: 1 (lower is better) Translates to: ALELAVQGRVILKAR*QRPQYRLLFPGKSS Trigger: AGAACTCTTCCCAGGGAACAGCAGTCGGTACTGTGGTCTTTGCCATCTAGCCTTTAAGATCACTCGCCCCTGCACTGCTAACTCTAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR CCA 90 bp | AGGAAGGCCAAGGACCTGAGTGTCCAGTCACTCTCTCGCCACTGGTaGACACATCCACACAAGTGCTTAGTTCTGTACAAAACCAAACCT | + |
|
Preference number: 1 (lower is better) Translates to: RKAKDLSVQSLSRHW*THPHKCLVLYKTKP Trigger: AGGTTTGGTTTTGTACAGAACTAAGCACTTGTGTGGATGTGTCCACCAGTGGCGAGAGAGTGACTGGACACTCAGGTCCTTGGCCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR CCA 90 bp | CTGAGGAAGGCCAAGGACCTGAGTGTCCAGTCACTCTCTCGCCACTaGTGGACACATCCACACAAGTGCTTAGTTCTGTACAAAACCAAA | + |
|
Preference number: 1 (lower is better) Translates to: LRKAKDLSVQSLSRH*WTHPHKCLVLYKTK Trigger: TTTGGTTTTGTACAGAACTAAGCACTTGTGTGGATGTGTCCACCAGTGGCGAGAGAGTGACTGGACACTCAGGTCCTTGGCCTTCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR CCA 90 bp | GAGTGGTTGCTCCTTCGGTTGCTTTTCAGGTTGTCACTAGTGATATaGTATCATCCAGCTGTGGCCACAGTGACTCTCTGTGACGAAAGC | + |
|
Preference number: 1 (lower is better) Translates to: EWLLLRLLFRLSLVI*YHPAVATVTLCDES Trigger: GCTTTCGTCACAGAGAGTCACTGTGGCCACAGCTGGATGATACCATATCACTAGTGACAACCTGAAAAGCAACCGAAGGAGCAACCACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR TCA 90 bp | AAAACATGCAAGCTATACCCAAGTGAGAAACAAGGAGAAACCCTGTaGTCACTGCTTTCAGCAGGCAGAATCCTGTGCACAAGGAGAGGT | + |
|
Preference number: 1 (lower is better) Translates to: KTCKLYPSEKQGETL*SLLSAGRILCTRRG Trigger: ACCTCTCCTTGTGCACAGGATTCTGCCTGCTGAAAGCAGTGATCACAGGGTTTCTCCTTGTTTCTCACTTGGGTATAGCTTGCATGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR GCA 90 bp | CAAAGAAGCAATGGGAGACCGCTGAACTGCACCCAAGTCATCGGCTaGACTGATACAGAAGATACATCCGAGTTTAGTTACCAAGAACAT | + |
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Preference number: 1 (lower is better) Translates to: QRSNGRPLNCTQVIG*TDTEDTSEFSYQEH Trigger: ATGTTCTTGGTAACTAAACTCGGATGTATCTTCTGTATCAGTGCAGCCGATGACTTGGGTGCAGTTCAGCGGTCTCCCATTGCTTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR GCA 90 bp | ACAGACTGTCTGGTGTGTGCAGAAACGGCCAGGGACTTGCGAACAGAGGGCATGTGGTCATGGTGGGGGTaGACAGGCGCGTGCGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TDCLVCAETARDLRTEGMWSWWG*TGACVC Trigger: ACACACGCACGCGCCTGTGCACCCCCACCATGACCA...CATGCCCTCTGTTCGCAAGTCCCTGGCCGTTTCTGCACACACCAGACAGTCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR CCA 90 bp | CACCCAGCTGGAGTGTACGGATATGAAGAGATGGGAAGGCCATCGGGAACCTTCCCCTGGGAAGAGTTCTaGGCTCCCTTCCCTGGGGCG | + |
|
Preference number: 2 (lower is better) Translates to: HPAGVYGYEEMGRPSGTFPWEEF*APFPGA Trigger: CGCCCCAGGGAAGGGAGCCCAGAACTCTTCCCAGGG...GAAGGTTCCCGATGGCCTTCCCATCTCTTCATATCCGTACACTCCAGCTGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR TCA 90 bp | GCACAGACTGTCTGGTGTGTGCAGAAACGGCCAGGGACTTGCGAACAGAGGGCATGGGCCCTTGGTCCTTaGACCTGTGCCTCCAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: AQTVWCVQKRPGTCEQRAWALGP*TCASSF Trigger: GAAACTGGAGGCACAGGTTCAAGGACCAAGGGCCCA...TGCCCTCTGTTCGCAAGTCCCTGGCCGTTTCTGCACACACCAGACAGTCTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR TCA 90 bp | ACAGACTGTCTGGTGTGTGCAGAAACGGCCAGGGACTTGCGAACAGAGGGCATGGGAAGGCCAAGGACCTaGGTGTCCAGTCACTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: TDCLVCAETARDLRTEGMGRPRT*VSSHSL Trigger: GAGAGAGTGACTGGACACTCAGGTCCTTGGCCTTCC...CATGCCCTCTGTTCGCAAGTCCCTGGCCGTTTCTGCACACACCAGACAGTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR GCA 90 bp | ACAGACTGTCTGGTGTGTGCAGAAACGGCCAGGGACTTGCGAACAGAGGGCATGAGAATAGAAACCATGTaGCCTGCCCCAAGTCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: TDCLVCAETARDLRTEGMRIETM*PAPSLP Trigger: GGGCAGACTTGGGGCAGGGCACATGGTTTCTATTCT...CATGCCCTCTGTTCGCAAGTCCCTGGCCGTTTCTGCACACACCAGACAGTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR CCA 90 bp | CACCCAGCTGGAGTGTACGGATATGAAGAGATGGGAAGGCCATCGGGAACCTTCCTCTCTCGCCACTGGTaGACACATCCACACAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: HPAGVYGYEEMGRPSGTFLSRHW*THPHKC Trigger: GCACTTGTGTGGATGTGTCCACCAGTGGCGAGAGAG...GAAGGTTCCCGATGGCCTTCCCATCTCTTCATATCCGTACACTCCAGCTGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR CAA 90 bp | AACACAGGCACAGACTGTCTGGTGTGTGCAGAAACGGCCAGGGACTaGCGAACAGAGGGCATGCACATAGCGTTAAGTGAAGTGTGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: NTGTDCLVCAETARD*RTEGMHIALSEVWC Trigger: GCACCACACTTCACTTAACGCTATGTGCATGCCCTCTGTTCGCAAGTCCCTGGCCGTTTCTGCACACACCAGACAGTCTGTGCCTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR GCA 90 bp | CACCCAGCTGGAGTGTACGGATATGAAGAGATGGGAAGGCCATCGGGAACCTTCAGGCCACCTGCCTTCTaGCAAAGCAGTTGTGACCAT | + |
|
Preference number: 2 (lower is better) Translates to: HPAGVYGYEEMGRPSGTFRPPAF*QSSCDH Trigger: ATGGTCACAACTGCTTTGGCAGAAGGCAGGTGGCCT...GAAGGTTCCCGATGGCCTTCCCATCTCTTCATATCCGTACACTCCAGCTGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR CCA 90 bp | AGTGGACTGAGCTGGCACGGCCACTGCCTTTTAAGCCACCCAGCTGGAGTGTACGCATCCTGGAAGCTGTaGGTCAGAATTTCAAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SGLSWHGHCLLSHPAGVYASWKL*VRISKG Trigger: CCCTTTTGAAATTCTGACCCACAGCTTCCAGGATGC...GTACACTCCAGCTGGGTGGCTTAAAAGGCAGTGGCCGTGCCAGCTCAGTCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR TCA 90 bp | AAGCTGGGTCAGAGGGTCTGTCTTCTACAAGCCACTCCCAGGCAGACACTTATGCTGCCAAAGCAGTTGTaGCCATCCTATTTCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: KLGQRVCLLQATPRQTLMLPKQL*PSYFSW Trigger: CCAGGAGAAATAGGATGGTCACAACTGCTTTGGCAG...CATAAGTGTCTGCCTGGGAGTGGCTTGTAGAAGACAGACCCTCTGACCCAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR TCA 90 bp | ACAGACTGTCTGGTGTGTGCAGAAACGGCCAGGGACTTGCGAACAGAGGGCATGCAAGCTATACCCAAGTaGGAAACAAGGAGAAACCCT | + |
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Preference number: 2 (lower is better) Translates to: TDCLVCAETARDLRTEGMQAIPK*ETRRNP Trigger: AGGGTTTCTCCTTGTTTCTCACTTGGGTATAGCTTG...CATGCCCTCTGTTCGCAAGTCCCTGGCCGTTTCTGCACACACCAGACAGTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGGGCATGCACATAGCGTTAAGTGAAGTGTGGTGCTTGTATGACTTCCGCCAGCTTGTCAACAGTTaGAGCTCAGGGCAAGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: TEGMHIALSEVWCLYDFRQLVNS*SSGQGH Trigger: GTGGCCTTGCCCTGAGCTGCAACTGTTGACAAGCTG...GCGGAAGTCATACAAGCACCACACTTCACTTAACGCTATGTGCATGCCCTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR GCA 90 bp | ACAGACTGTCTGGTGTGTGCAGAAACGGCCAGGGACTTGCGAACAGAGGGCATGTTAAGTGAAGTGTGGTaGTTGTATGACTTCCGCAGC | + |
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Preference number: 2 (lower is better) Translates to: TDCLVCAETARDLRTEGMLSEVW*LYDFRS Trigger: GCTGCGGAAGTCATACAAGCACCACACTTCACTTAA...CATGCCCTCTGTTCGCAAGTCCCTGGCCGTTTCTGCACACACCAGACAGTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR CCA 90 bp | AGGTTGTCACTAGTGATATGGTATCATCCAGCTGTGGCCACAGTGACTCTCTGTCACACACACACACACTaGAAGTCCCAGCTCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RLSLVIWYHPAVATVTLCHTHTH*KSQLPG Trigger: CCCAGGGAGCTGGGACTTCCAGTGTGTGTGTGTGTG...ACAGAGAGTCACTGTGGCCACAGCTGGATGATACCATATCACTAGTGACAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR CCA 90 bp | ATACCCACAGTAGGCTCCATTTTGTACAGAATAGAAACCATGTGCCCTGCCCCATCACTCTCTCGCCACTaGTGGACACATCCACACAAG | + |
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Preference number: 2 (lower is better) Translates to: IPTVGSILYRIETMCPAPSLSRH*WTHPHK Trigger: CTTGTGTGGATGTGTCCACCAGTGGCGAGAGAGTGA...TGGGGCAGGGCACATGGTTTCTATTCTGTACAAAATGGAGCCTACTGTGGGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR GCA 90 bp | CACCCAGCTGGAGTGTACGGATATGAAGAGATGGGAAGGCCATCGGGAACCTTCCAGCTTTCAAAAACATaGAAGCTATACCCAAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: HPAGVYGYEEMGRPSGTFQLSKT*KLYPSE Trigger: CTCACTTGGGTATAGCTTGCATGTTTTTGAAAGCTG...GAAGGTTCCCGATGGCCTTCCCATCTCTTCATATCCGTACACTCCAGCTGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR GCA 90 bp | ATACCCACAGTAGGCTCCATTTTGTACAGAATAGAAACCATGTGCCCTGCCCCAGCAGGCAGAATCCTGTaGACAAGGAGAGGTTTAGAT | + |
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Preference number: 2 (lower is better) Translates to: IPTVGSILYRIETMCPAPAGRIL*TRRGLD Trigger: ATCTAAACCTCTCCTTGTGCACAGGATTCTGCCTGC...TGGGGCAGGGCACATGGTTTCTATTCTGTACAAAATGGAGCCTACTGTGGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR GCA 90 bp | ACATCCACACAAGTGCTTAGTTCTGTACAAAACCAAACCTTAAGGAGCGCATGGGACCACAGTACCGACTaGTGTTCCCTGGGAAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: TSTQVLSSVQNQTLRSAWDHSTD*CSLGRV Trigger: AACTCTTCCCAGGGAACAGCAGTCGGTACTGTGGTC...CCATGCGCTCCTTAAGGTTTGGTTTTGTACAGAACTAAGCACTTGTGTGGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR CCA 90 bp | ACATCCACACAAGTGCTTAGTTCTGTACAAAACCAAACCTTAAGGAGCGCATGGCAGCATCTTGTCCTCTaGTCTTCAGCTCTCAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: TSTQVLSSVQNQTLRSAWQHLVL*SSALKE Trigger: CTCCTTGAGAGCTGAAGACCAGAGGACAAGATGCTG...CCATGCGCTCCTTAAGGTTTGGTTTTGTACAGAACTAAGCACTTGTGTGGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR TCA 72 bp | ATGACTTCCGCAGCTCAGCACAGGGAGGGGAGCGGCTaGCCACAGCGGAGTGGACTGAGCTGGCACGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: MTSAAQHREGSG*PQRSGLSWHGH Trigger: GTGGCCGTGCCAGCTCAGTCCACTCCGCTGTGGTCAGCCGCTCCCCTCCCTGTGCTGAGCTGCGGAAGTCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR CCA 72 bp | GCGCGCGCGCACACACACACACACACACACACACACTaGAAGTCCCAGCTCCCTGGGTGCCAACTCCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: ARAHTHTHTHTH*KSQLPGCQLLS Trigger: GGAGAGGAGTTGGCACCCAGGGAGCTGGGACTTCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR CCA 72 bp | CACACACACACACACACACTGGAAGTCCCAGCTCCCTaGGTGCCAACTCCTCTCCATCCCCTCGGGGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: HTHTHTLEVPAP*VPTPLHPLGAE Trigger: TTCAGCCCCGAGGGGATGGAGAGGAGTTGGCACCCAGGGAGCTGGGACTTCCAGTGTGTGTGTGTGTGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR CCA 72 bp | AAGCAGCAAATGGGATTCAGCATAGCCTTCAAGGGCTaGGGCTGCGTGGTCATGGTGGGGGTGCACAGGCGC | + |
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Preference number: 3 (lower is better) Translates to: KQQMGFSIAFKG*GCVVMVGVHRR Trigger: GCGCCTGTGCACCCCCACCATGACCACGCAGCCCCAGCCCTTGAAGGCTATGCTGAATCCCATTTGCTGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR GCA 72 bp | CACACACACACACACTGGAAGTCCCAGCTCCCTGGGTaGCAACTCCTCTCCATCCCCTCGGGGCTGAATAAG | + |
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Preference number: 3 (lower is better) Translates to: HTHTHWKSQLPG*QLLSIPSGLNK Trigger: CTTATTCAGCCCCGAGGGGATGGAGAGGAGTTGGCACCCAGGGAGCTGGGACTTCCAGTGTGTGTGTGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR CCA 72 bp | GGCTATCTCTTGCTGACGTCACCGCCCATGGGCCCTTaGTCCTTGAACCTGTGCCTCCAGTTTCCCGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: GYLLLTSPPMGP*SLNLCLQFPVS Trigger: GGAAACGGGAAACTGGAGGCACAGGTTCAAGGACCAAGGGCCCATGGGCGGTGACGTCAGCAAGAGATAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR CCA 72 bp | TGCTGTTCCCTGGGAAGAGTTCTGGGCTCCCTTCCCTaGGGCGGTCAGTTCACTTCCTACTTCCACTCCACC | + |
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Preference number: 3 (lower is better) Translates to: CCSLGRVLGSLP*GGQFTSYFHST Trigger: GGTGGAGTGGAAGTAGGAAGTGAACTGACCGCCCCAGGGAAGGGAGCCCAGAACTCTTCCCAGGGAACAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR CCA 72 bp | ACCACAGTACCGACTGCTGTTCCCTGGGAAGAGTTCTaGGCTCCCTTCCCTGGGGCGGTCAGTTCACTTCCT | + |
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Preference number: 3 (lower is better) Translates to: TTVPTAVPWEEF*APFPGAVSSLP Trigger: AGGAAGTGAACTGACCGCCCCAGGGAAGGGAGCCCAGAACTCTTCCCAGGGAACAGCAGTCGGTACTGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR CCA 72 bp | TCTCCAGGCCTGAGCATCCGCCAGCATCTTGTCCTCTaGTCTTCAGCTCTCAAGGAGGGGGCTGACTTTGAT | + |
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Preference number: 3 (lower is better) Translates to: SPGLSIRQHLVL*SSALKEGADFD Trigger: ATCAAAGTCAGCCCCCTCCTTGAGAGCTGAAGACCAGAGGACAAGATGCTGGCGGATGCTCAGGCCTGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR-3UTR CAA 90 bp | GCACAGACTGTCTGGTGTGTGCAGAAACGGCCAGGGACTTGCGAACAGAGGGCAATAAACATCACCGTTTaGGAGGAGGGGACAGCATCC | + |
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Preference number: 3 (lower is better) Translates to: AQTVWCVQKRPGTCEQRAINITV*EEGTAS Trigger: GGATGCTGTCCCCTCCTCCAAAACGGTGATGTTTAT...TGCCCTCTGTTCGCAAGTCCCTGGCCGTTTCTGCACACACCAGACAGTCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR GCA 72 bp | CAACAGTTGCAGCTCAGGGCAAGGCCACCTGCCTTCTaGCAAAGCAGTTGTGACCATCCTATTTCTCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: QQLQLRARPPAF*QSSCDHPISPG Trigger: CCCAGGAGAAATAGGATGGTCACAACTGCTTTGGCAGAAGGCAGGTGGCCTTGCCCTGAGCTGCAACTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR GCA 72 bp | ACGTCACCGCCCATGGGCCCTTGGTCCTTGAACCTGTaGCTCCAGTTTCCCGTTTCCTGTTACATTGTATCT | + |
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Preference number: 3 (lower is better) Translates to: TSPPMGPWSLNL*LQFPVSCYIVS Trigger: AGATACAATGTAACAGGAAACGGGAAACTGGAGGCACAGGTTCAAGGACCAAGGGCCCATGGGCGGTGACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR GCA 72 bp | ACAGAGGGCATGCACATAGCGTTAAGTGAAGTGTGGTaGTTGTATGACTTCCGCAGCTCAGCACAGGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: TEGMHIALSEVW*LYDFRSSAQGG Trigger: CCCTCCCTGTGCTGAGCTGCGGAAGTCATACAAGCACCACACTTCACTTAACGCTATGTGCATGCCCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR GCA 72 bp | ACAACCATAGAACACAGGCACAGACTGTCTGGTGTGTaGAGAAACGGCCAGGGACTTGCGAACAGAGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: TTIEHRHRLSGV*RNGQGLANRGH Trigger: ATGCCCTCTGTTCGCAAGTCCCTGGCCGTTTCTGCACACACCAGACAGTCTGTGCCTGTGTTCTATGGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR TCA 72 bp | CAGGGCAAGGCCACCTGCCTTCTGCCAAAGCAGTTGTaGCCATCCTATTTCTCCTGGGTCAAAGATACGAGA | + |
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Preference number: 3 (lower is better) Translates to: QGKATCLLPKQL*PSYFSWVKDTR Trigger: TCTCGTATCTTTGACCCAGGAGAAATAGGATGGTCACAACTGCTTTGGCAGAAGGCAGGTGGCCTTGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
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| 3UTR CCA 72 bp | AAGAAAATACAGAAGCCTGATGAATGGCAGTCTCGATaGCTATCTCTTGCTGACGTCACCGCCCATGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: KKIQKPDEWQSR*LSLADVTAHGP Trigger: GGGCCCATGGGCGGTGACGTCAGCAAGAGATAGCCATCGAGACTGCCATTCATCAGGCTTCTGTATTTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR-3UTR CAA 90 bp | TCGGTTGCTTTTCAGGTTGTCACTAGTGATATGGTATCATCCAGCTGTGGCCACACAGCTTGTCAACAGTaGCAGCTCAGGGCAAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SVAFQVVTSDMVSSSCGHTACQQ*QLRARP Trigger: TGGCCTTGCCCTGAGCTGCAACTGTTGACAAGCTGT...GTGGCCACAGCTGGATGATACCATATCACTAGTGACAACCTGAAAAGCAACCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR TCA 72 bp | TCTGTCTTCTACAAGCCACTCCCAGGCAGACACTTATaGGGCTCAAAGAAGCAATGGGAGACCGCTGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: SVFYKPLPGRHL*GSKKQWETAEL Trigger: CAGTTCAGCGGTCTCCCATTGCTTCTTTGAGCCTCATAAGTGTCTGCCTGGGAGTGGCTTGTAGAAGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR TCA 72 bp | TTAGTTTTAGGAACCGAGGAGGGAAACGGGGTGCAATaGAGCTGGGTCAGAGGGTCTGTCTTCTACAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LVLGTEEGNGVQ*SWVRGSVFYKP Trigger: TGGCTTGTAGAAGACAGACCCTCTGACCCAGCTTCATTGCACCCCGTTTCCCTCCTCGGTTCCTAAAACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR GCA 72 bp | ACCCAAGTGAGAAACAAGGAGAAACCCTGTGATCACTaGTTTCAGCAGGCAGAATCCTGTGCACAAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TQVRNKEKPCDH*FQQAESCAQGE Trigger: CTCTCCTTGTGCACAGGATTCTGCCTGCTGAAAGCAGTGATCACAGGGTTTCTCCTTGTTTCTCACTTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR CCA 72 bp | AAGGACCTGAGTGTCCAGTCACTCTCTCGCCACTGGTaGACACATCCACACAAGTGCTTAGTTCTGTACAAA | + |
|
Preference number: 3 (lower is better) Translates to: KDLSVQSLSRHW*THPHKCLVLYK Trigger: TTTGTACAGAACTAAGCACTTGTGTGGATGTGTCCACCAGTGGCGAGAGAGTGACTGGACACTCAGGTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGAATACACGTTTTACTGTACATACGCATGCCTTTATGCAAGCTAAGAGAAAGACCGCCCATGGGCCCTaGGTCCTTGAACCTGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QNTRFTVHTHAFMQAKRKTAHGP*VLEPVP Trigger: AGGCACAGGTTCAAGGACCAAGGGCCCATGGGCGGT...CTTTCTCTTAGCTTGCATAAAGGCATGCGTATGTACAGTAAAACGTGTATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR-3UTR CAA 90 bp | ACAGACTGTCTGGTGTGTGCAGAAACGGCCAGGGACTTGCGAACAGAGGGCATGATTACACTTGCAACTTaGCAACAAAGCACCATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TDCLVCAETARDLRTEGMITLAT*QQSTIE Trigger: TTCTATGGTGCTTTGTTGCAAAGTTGCAAGTGTAAT...CATGCCCTCTGTTCGCAAGTCCCTGGCCGTTTCTGCACACACCAGACAGTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR CCA 72 bp | CTCCTTCGGTTGCTTTTCAGGTTGTCACTAGTGATATaGTATCATCCAGCTGTGGCCACAGTGACTCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LLRLLFRLSLVI*YHPAVATVTLC Trigger: ACAGAGAGTCACTGTGGCCACAGCTGGATGATACCATATCACTAGTGACAACCTGAAAAGCAACCGAAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR TCA 72 bp | AAGCTATACCCAAGTGAGAAACAAGGAGAAACCCTGTaGTCACTGCTTTCAGCAGGCAGAATCCTGTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: KLYPSEKQGETL*SLLSAGRILCT Trigger: TGTGCACAGGATTCTGCCTGCTGAAAGCAGTGATCACAGGGTTTCTCCTTGTTTCTCACTTGGGTATAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCAAAGCAGTTGTGACCATCCTATTTCTCCTGGGTCAAAGATACGAGAGAATATCAAAACGTCACTaGGCCTCCAAACGAGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SAKAVVTILFLLGQRYERISKRH*ASKRVL Trigger: AAGGACTCGTTTGGAGGCCAAGTGACGTTTTGATAT...TCTCTCGTATCTTTGACCCAGGAGAAATAGGATGGTCACAACTGCTTTGGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR CCA 72 bp | CTTAGTTCTGTACAAAACCAAACCTTAAGGAGCGCATaGTGCTTGAGCACTGATGCTAAACCTTTCTCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: LSSVQNQTLRSA*CLSTDAKPFSP Trigger: CGGAGAGAAAGGTTTAGCATCAGTGCTCAAGCACCATGCGCTCCTTAAGGTTTGGTTTTGTACAGAACTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR CCA 72 bp | CTTGCAACTTTGCAACAAAGCACCATAGAAATACACTaGGACTCTTTAAATTCATACACGCACTCGCGCGCG | + |
|
Preference number: 3 (lower is better) Translates to: LATLQQSTIEIH*DSLNSYTHSRA Trigger: CGCGCGCGAGTGCGTGTATGAATTTAAAGAGTCCCAGTGTATTTCTATGGTGCTTTGTTGCAAAGTTGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR TCA 72 bp | CGGTCAGCTTTCAAAAACATGCAAGCTATACCCAAGTaGGAAACAAGGAGAAACCCTGTGATCACTGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RSAFKNMQAIPK*ETRRNPVITAF Trigger: GAAAGCAGTGATCACAGGGTTTCTCCTTGTTTCTCACTTGGGTATAGCTTGCATGTTTTTGAAAGCTGACCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR GCA 72 bp | AAGACACTAGGATGGTTGACCAATACCAAGGGAATCTaGTCTACAGATTTATCTGCTCATCCACTCTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: KTLGWLTNTKGI*STDLSAHPLST Trigger: TGTGGAGAGTGGATGAGCAGATAAATCTGTAGAGCAGATTCCCTTGGTATTGGTCAACCATCCTAGTGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR TCA 72 bp | TTCCTAAAGGCAGTTTCCCTGCTAGGATCCCTAAAGTaGTTATTGAAGAAAATACAGAAGCCTGATGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: FLKAVSLLGSLK*LLKKIQKPDEW Trigger: CCATTCATCAGGCTTCTGTATTTTCTTCAATAATCACTTTAGGGATCCTAGCAGGGAAACTGCCTTTAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR GCA 72 bp | CTGTTACATTGTATCTTCGGTCAGCTTTCAAAAACATaGAAGCTATACCCAAGTGAGAAACAAGGAGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: LLHCIFGQLSKT*KLYPSEKQGET Trigger: GGTTTCTCCTTGTTTCTCACTTGGGTATAGCTTGCATGTTTTTGAAAGCTGACCGAAGATACAATGTAACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR TCA 72 bp | TTCTCACATCAGAGTTATGTCTACAGTTCTAGCTTATaGTCTACATCACGCAGGAACATGCTGATTATGACT | + |
|
Preference number: 3 (lower is better) Translates to: FSHQSYVYSSSL*STSRRNMLIMT Trigger: AGTCATAATCAGCATGTTCCTGCGTGATGTAGATCATAAGCTAGAACTGTAGACATAACTCTGATGTGAGAA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR TCA 72 bp | TTACCAAGAACATGTAGTCACCTAACAGTTAAAGTATaGATACCCACAGTAGGCTCCATTTTGTACAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: LPRTCSHLTVKV*IPTVGSILYRI Trigger: TATTCTGTACAAAATGGAGCCTACTGTGGGTATTCATACTTTAACTGTTAGGTGACTACATGTTCTTGGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| CDS-3UTR TCA 90 bp | GTTCTGGGCTCCCTTCCCTGGGGCGGTCAGTTCACTTCCTACTTCCACTCCACCTCCGCTGGTGCTGGATaGGGTGGGAGAGGCGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLPWGGQFTSYFHSTSAGAG*GGRGGR Trigger: TCTGCCGCCTCTCCCACCTCATCCAGCACCAGCGGA...GGTGGAGTGGAAGTAGGAAGTGAACTGACCGCCCCAGGGAAGGGAGCCCAGAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| CDS-3UTR GCA 90 bp | CACCCAGCTGGAGTGTACGGATATGAAGAGATGGGAAGGCCATCGGGAACCTTCGTGTGCGCCCGGCGGTaGCGCACCAGGTCGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HPAGVYGYEEMGRPSGTFVCARR*RTRSEF Trigger: GAACTCCGACCTGGTGCGGCACCGCCGGGCGCACAC...GAAGGTTCCCGATGGCCTTCCCATCTCTTCATATCCGTACACTCCAGCTGGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| CDS-3UTR TCA 90 bp | GCCCAGCCACTACAGCTTGTCAACAGTTGCAGCTCAGGGCAAGGCCACCTGCCTGGACAAGCAGGTCAGTaGCTTGCTGGAGAGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQPLQLVNSCSSGQGHLPGQAGQ*LAGEGS Trigger: GCTACCCTCTCCAGCAAGTCACTGACCTGCTTGTCC...AGGCAGGTGGCCTTGCCCTGAGCTGCAACTGTTGACAAGCTGTAGTGGCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| CDS-3UTR TCA 90 bp | GCACAGACTGTCTGGTGTGTGCAGAAACGGCCAGGGACTTGCGAACAGAGGGCAGGTGGGAGATGCGGCTaGAGTTTTCCCCGCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: AQTVWCVQKRPGTCEQRAGGRCG*SFPRTR Trigger: ACGAGTGCGGGGAAAACTTCAGCCGCATCTCCCACC...TGCCCTCTGTTCGCAAGTCCCTGGCCGTTTCTGCACACACCAGACAGTCTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| CDS-3UTR GCA 90 bp | CACCCAGCTGGAGTGTACGGATATGAAGAGATGGGAAGGCCATCGGGAACCTTCCTGTGGGTCCGCTGGTaGTGGATGAGGTGGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPAGVYGYEEMGRPSGTFLWVRW*WMRWER Trigger: CCTCTCCCACCTCATCCAGCACCAGCGGACCCACAG...GAAGGTTCCCGATGGCCTTCCCATCTCTTCATATCCGTACACTCCAGCTGGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| CDS-3UTR GCA 90 bp | AAGCTGGGTCAGAGGGTCTGTCTTCTACAAGCCACTCCCAGGCAGACACTTATGTCTTCCCGCAGGCCGTaGACTCGTACGGCTTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KLGQRVCLLQATPRQTLMSSRRP*TRTASR Trigger: GCGAGAAGCCGTACGAGTGCACGGCCTGCGGGAAGA...CATAAGTGTCTGCCTGGGAGTGGCTTGTAGAAGACAGACCCTCTGACCCAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR CAA 72 bp | CTCTTGCTGACGTCACCGCCCATGGGCCCTTGGTCCTaGAACCTGTGCCTCCAGTTTCCCGTTTCCTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLTSPPMGPWS*NLCLQFPVSCY Trigger: GTAACAGGAAACGGGAAACTGGAGGCACAGGTTCAAGGACCAAGGGCCCATGGGCGGTGACGTCAGCAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR CAA 72 bp | TGGCTATCTCTTGCTGACGTCACCGCCCATGGGCCCTaGGTCCTTGAACCTGTGCCTCCAGTTTCCCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WLSLADVTAHGP*VLEPVPPVSRF Trigger: GAAACGGGAAACTGGAGGCACAGGTTCAAGGACCAAGGGCCCATGGGCGGTGACGTCAGCAAGAGATAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR CAA 72 bp | TTTGGAAGGGATGTGTGTGAGCCCAGCCACTACAGCTaGTCAACAGTTGCAGCTCAGGGCAAGGCCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FGRDVCEPSHYS*STVAAQGKATC Trigger: GCAGGTGGCCTTGCCCTGAGCTGCAACTGTTGACAAGCTGTAGTGGCTGGGCTCACACACATCCCTTCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR CAA 72 bp | GAGGGCATGCACATAGCGTTAAGTGAAGTGTGGTGCTaGTATGACTTCCGCAGCTCAGCACAGGGAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGMHIALSEVWC*YDFRSSAQGGE Trigger: CTCCCCTCCCTGTGCTGAGCTGCGGAAGTCATACAAGCACCACACTTCACTTAACGCTATGTGCATGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| CDS-3UTR TCA 90 bp | GATGGGAAGGCCATCGGGAACCTTCTGGGAACCTTTCATCTCTTAGAAGGCAAAGGTTGGAGCTCTGCGTaGAGCCCTTTCCGCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DGKAIGNLLGTFHLLEGKGWSSA*SPFRTA Trigger: TGCAGTGCGGAAAGGGCTTCACGCAGAGCTCCAACC...TTTGCCTTCTAAGAGATGAAAGGTTCCCAGAAGGTTCCCGATGGCCTTCCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGGAACCTTTCATCTCTTAGAAGGCAAAAGCAGCAAATGGGATTCAGCACACGGCCTTTCTGCCTaGTCCCCACTTTCGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLGTFHLLEGKSSKWDSAHGLSA*SPLSKA Trigger: GGCCTTCGAAAGTGGGGACCAGGCAGAAAGGCCGTG...TGCTGAATCCCATTTGCTGCTTTTGCCTTCTAAGAGATGAAAGGTTCCCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| 3UTR CAA 72 bp | CCCTCTGAGTGGTTGCTCCTTCGGTTGCTTTTCAGGTaGTCACTAGTGATATGGTATCATCCAGCTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSEWLLLRLLFR*SLVIWYHPAVA Trigger: GGCCACAGCTGGATGATACCATATCACTAGTGACAACCTGAAAAGCAACCGAAGGAGCAACCACTCAGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| CDS-3UTR CCA 90 bp | CAGAATACACGTTTTACTGTACATACGCATGCCTTTATGCAAGCTAAGAGAAAGTGGATCGTCTGGTGCTaGATGAGGTGCGAGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QNTRFTVHTHAFMQAKRKWIVWC*MRCELR Trigger: CCGCAGCTCGCACCTCATCCAGCACCAGACGATCCA...CTTTCTCTTAGCTTGCATAAAGGCATGCGTATGTACAGTAAAACGTGTATTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| CDS-3UTR TCA 90 bp | CTTCTGGGAACCTTTCATCTCTTAGAAGGCAAAAGCAGCAAATGGGATTCAGCAGTGTTTAATAAGCGCTaGGCTCCGGCTGAAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLGTFHLLEGKSSKWDSAVFNKR*APAETL Trigger: AAGAGTTTCAGCCGGAGCTCAGCGCTTATTAAACAC...TGCTGAATCCCATTTGCTGCTTTTGCCTTCTAAGAGATGAAAGGTTCCCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| CDS-3UTR CCA 90 bp | TTATTGAAGAAAATACAGAAGCCTGATGAATGGCAGTCTCGATGGCTATCTCTTGCGTGCGCTTCCTTGTaGACAAGCAGGTCAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LLKKIQKPDEWQSRWLSLACASL*TSRSVT Trigger: AGTCACTGACCTGCTTGTCCACAAGGAAGCGCACGC...AAGAGATAGCCATCGAGACTGCCATTCATCAGGCTTCTGTATTTTCTTCAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| CDS-3UTR TCA 90 bp | GATGGGAAGGCCATCGGGAACCTTCTGGGAACCTTTCATCTCTTAGAAGGCAAAGATCTCAAAATCCAGTaGGACAACATTTCCGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: DGKAIGNLLGTFHLLEGKDLKIQ*DNISVI Trigger: AATTACGGAAATGTTGTCTCACTGGATTTTGAGATC...TTTGCCTTCTAAGAGATGAAAGGTTCCCAGAAGGTTCCCGATGGCCTTCCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| CDS-3UTR CAA 90 bp | AGTGGACTGAGCTGGCACGGCCACTGCCTTTTAAGCCACCCAGCTGGAGTGTACAAGCAGGTCAGTGACTaGCTGGAGAGGGTAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SGLSWHGHCLLSHPAGVYKQVSD*LERVAD Trigger: GTCAGCTACCCTCTCCAGCAAGTCACTGACCTGCTT...GTACACTCCAGCTGGGTGGCTTAAAAGGCAGTGGCCGTGCCAGCTCAGTCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| CDS-3UTR CAA 90 bp | GATGGGAAGGCCATCGGGAACCTTCTGGGAACCTTTCATCTCTTAGAAGGCAAAAACTCCTGTTTGGGGTaGGCTTCATTCTCGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DGKAIGNLLGTFHLLEGKNSCLG*ASFSLL Trigger: CAGGAGCGAGAATGAAGCCAACCCCAAACAGGAGTT...TTTGCCTTCTAAGAGATGAAAGGTTCCCAGAAGGTTCCCGATGGCCTTCCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069195.5 |
||
| CDS CCA 72 bp | TCCTCCGCTGTCAGGTCTCCCCACGGCCTTTCTGCCTaGTCCCCACTTTCGAAGGCCTCTTCGCTTCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSAVRSPHGLSA*SPLSKASSLPG Trigger: TCCTGGAAGCGAAGAGGCCTTCGAAAGTGGGGACCAGGCAGAAAGGCCGTGGGGAGACCTGACAGCGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069195.5 ENSMUST00000130658.2 ENSMUST00000144217.8 |
||
| CDS GCA 72 bp | AGGCTTTCCCACACTGAGAACAAATGTGGTAGCGGATaGCCGCGTGCGCTTCCTTGTGGACAAGCAGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLSHTENKCGSG*PRALPCGQAGQ Trigger: CTGACCTGCTTGTCCACAAGGAAGCGCACGCGGGCATCCGCTACCACATTTGTTCTCAGTGTGGGAAAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069195.5 ENSMUST00000130658.2 ENSMUST00000144217.8 |
||
| CDS CAA 72 bp | ATGGTCGCGAATTCCACATCGTCACTAAACTCCTGTTaGGGGTTGGCTTCATTCTCGCTCCTGATCTCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: MVANSTSSLNSC*GLASFSLLISK Trigger: TTTTGAGATCAGGAGCGAGAATGAAGCCAACCCCAAACAGGAGTTTAGTGACGATGTGGAATTCGCGACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069195.5 ENSMUST00000130223.8 ENSMUST00000130658.2 ENSMUST00000144217.8 |
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