Pregenerated sensors for ZFP457 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055341Ensembl transcript IDs: ENSMUST00000049705.8, ENSMUST00000224325.2, ENSMUST00000225338.2
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | ATGCAGGGGTCTCTGCATTTGGGAATGGAGACACGTGGTAGACTCACAGGCCCACAGGGGTCTCTGCATTaGGGAATGGAGACACGTGGT | + |
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Preference number: 3 (lower is better) Translates to: MQGSLHLGMETRGRLTGPQGSLH*GMETRG Trigger: ACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTG...TGGGCCTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224325.2 ENSMUST00000225338.2 |
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| 3UTR CCA 72 bp | TCAGAAGAATTTCCTGCATGCAGGGGTCTCTGCATTTaGGAATGGAGACACGTGGTAGACTCACAGGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: SEEFPACRGLCI*EWRHVVDSQAQ Trigger: CTGGGCCTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTGCATGCAGGAAATTCTTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224325.2 ENSMUST00000225338.2 |
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| 3UTR TCA 72 bp | GAGGAATTCCAGGAAGGGTTCTGTGCTCTTTACCCTTaGTTGGTTAGCTCTACCTCTACAGGTGTAACTGAT | + |
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Preference number: 3 (lower is better) Translates to: EEFQEGFCALYP*LVSSTSTGVTD Trigger: ATCAGTTACACCTGTAGAGGTAGAGCTAACCAATCAAGGGTAAAGAGCACAGAACCCTTCCTGGAATTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224325.2 ENSMUST00000225338.2 |
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| 3UTR GCA 72 bp | ATTTATTCAGAAGAATTTCCTGCATGCAGGGGTCTCTaGATTTGGGAATGGAGACACGTGGTAGACTCACAG | + |
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Preference number: 3 (lower is better) Translates to: IYSEEFPACRGL*IWEWRHVVDSQ Trigger: CTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTGCATGCAGGAAATTCTTCTGAATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224325.2 ENSMUST00000225338.2 |
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| CDS-3UTR TCA 90 bp | CAGGGGTCTCTGCATTTGGGAATGGAGACACGTGGTAGACTCACAGGCCCAGCTGTGGTTGTGGTTGGGTaGTCACAGGTTCTGGGATCC | + |
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Preference number: 4 (lower is better) Translates to: QGSLHLGMETRGRLTGPAVVVVG*SQVLGS Trigger: GGATCCCAGAACCTGTGATCACCCAACCACAACCAC...AGCTGGGCCTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR GCA 90 bp | ATGCAGGGGTCTCTGCATTTGGGAATGGAGACACGTGGTAGACTCACAGGCCCAGAGAACCGAAGGCCTTaGCACATATGTCACACTTGT | + |
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Preference number: 4 (lower is better) Translates to: MQGSLHLGMETRGRLTGPENRRP*HICHTC Trigger: ACAAGTGTGACATATGTGGCAAGGCCTTCGGTTCTC...TGGGCCTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR GCA 90 bp | GCATGCAGGGGTCTCTGCATTTGGGAATGGAGACACGTGGTAGACTCACAGGCCCAGAATGGAAGGCCTTaGCACAGACTTCATCACTTT | + |
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Preference number: 4 (lower is better) Translates to: ACRGLCIWEWRHVVDSQAQNGRP*HRLHHF Trigger: AAAGTGATGAAGTCTGTGGCAAGGCCTTCCATTCTG...GGCCTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTGCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225338.2 |
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| CDS-3UTR GCA 90 bp | CCTATTCTTACTTCAGGCCAGATGACAAGGTGTCCTCCGATTGGCTGCCGGTGGGATAATGGAAGGCCTTaGCATGTGCTTCCCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: PILTSGQMTRCPPIGCRWDNGRP*HVLPTC Trigger: ACAAGTGGGAAGCACATGGCAAGGCCTTCCATTATC...CCACCGGCAGCCAATCGGAGGACACCTTGTCATCTGGCCTGAAGTAAGAATAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225338.2 |
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| CDS-3UTR CCA 90 bp | AGGAAGGGTTCTGTGCTCTTTACCCTTGATTGGTTAGCTCTACCTCTACAGGTGGCCGGTGGTTGTGGTTaGGTGATCACAGGTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: RKGSVLFTLDWLALPLQVAGGCG*VITGSG Trigger: CCCAGAACCTGTGATCACCCAACCACAACCACCGGC...CACCTGTAGAGGTAGAGCTAACCAATCAAGGGTAAAGAGCACAGAACCCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR TCA 90 bp | GCATGCAGGGGTCTCTGCATTTGGGAATGGAGACACGTGGTAGACTCACAGGCCGTGTACAGAAAGTATTaGTGGACAATGGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: ACRGLCIWEWRHVVDSQAVYRKY*WTMEGL Trigger: AAGGCCTTCCATTGTCCATCAATACTTTCTGTACAC...GGCCTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTGCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR TCA 90 bp | CAGGGGTCTCTGCATTTGGGAATGGAGACACGTGGTAGACTCACAGGCCCAGCTATGTTCGGAAAGCCTTaGTGGATAATTGAAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: QGSLHLGMETRGRLTGPAMFGKP*WIIEAL Trigger: AAGGGCTTCAATTATCCATCAAGGCTTTCCGAACAT...AGCTGGGCCTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR CCA 90 bp | GCATGCAGGGGTCTCTGCATTTGGGAATGGAGACACGTGGTAGACTCACAGGCCTTTAGAAAGTATGGATaGGTAATGGAAGGTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: ACRGLCIWEWRHVVDSQAFRKYG*VMEGLA Trigger: GGCAAGACCTTCCATTACCCATCCATACTTTCTAAA...GGCCTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTGCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR GCA 90 bp | TGCAGGGGTCTCTGCATTTGGGAATGGAGACACGTGGTAGACTCACAGGCCCAGGATAATCAAAGGCCTTaGCACATATTTCACACTTGT | + |
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Preference number: 4 (lower is better) Translates to: CRGLCIWEWRHVVDSQAQDNQRP*HIFHTC Trigger: ACAAGTGTGAAATATGTGGCAAGGCCTTTGATTATC...CTGGGCCTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR CCA 90 bp | ATGCAGGGGTCTCTGCATTTGGGAATGGAGACACGTGGTAGACTCACAGGCCCAAGTAACGATGGAAAATaGAAGGACTTGCCACATTCT | + |
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Preference number: 4 (lower is better) Translates to: MQGSLHLGMETRGRLTGPSNDGK*KDLPHS Trigger: AGAATGTGGCAAGTCCTTCCATTTTCCATCGTTACT...TGGGCCTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR CCA 90 bp | ATGCAGGGGTCTCTGCATTTGGGAATGGAGACACGTGGTAGACTCACAGGCCCAAATTTCACACTTGCATaGTTTCTCTTCTGTAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: MQGSLHLGMETRGRLTGPNFTLA*FLFCSK Trigger: CTTACTACAGAAGAGAAACCATGCAAGTGTGAAATT...TGGGCCTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR TCA 90 bp | AGGAAGGGTTCTGTGCTCTTTACCCTTGATTGGTTAGCTCTACCTCTACAGGTGGTGATGAGAAAGTTTTaGTGGGATATTGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: RKGSVLFTLDWLALPLQVVMRKF*WDIEGL Trigger: AAGGCCTTCAATATCCCATCAAAACTTTCTCATCAC...CACCTGTAGAGGTAGAGCTAACCAATCAAGGGTAAAGAGCACAGAACCCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR TCA 90 bp | CTAGCTACCTATTCTTACTTCAGGCCAGATGACAAGGTGTCCTCCGATTGGCTGATATTTGAAAAGTCTTaGTGCAGAATGGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LATYSYFRPDDKVSSDWLIFEKS*CRMEGL Trigger: AAGGCCTTCCATTCTGCATCAAGACTTTTCAAATAT...CAGCCAATCGGAGGACACCTTGTCATCTGGCCTGAAGTAAGAATAGGTAGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225338.2 |
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| CDS-3UTR CCA 90 bp | AGGAATTCCAGGAAGGGTTCTGTGCTCTTTACCCTTGATTGGTTAGCTCTACCTAGTATTGATGGACAATaGAAGGCCTTGCCACATACT | + |
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Preference number: 4 (lower is better) Translates to: RNSRKGSVLFTLDWLALPSIDGQ*KALPHT Trigger: AGTATGTGGCAAGGCCTTCCATTGTCCATCAATACT...AGGTAGAGCTAACCAATCAAGGGTAAAGAGCACAGAACCCTTCCTGGAATTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR TCA 90 bp | AGACACGTGGTAGACTCACAGGCCCAGCTTTTATTGTTAGTTAGAGGAATTCCAGTTTTGATGGGATATTaGAGGCCTTGCCACATACTT | + |
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Preference number: 4 (lower is better) Translates to: RHVVDSQAQLLLLVRGIPVLMGY*RPCHIL Trigger: AAGTATGTGGCAAGGCCTTCAATATCCCATCAAAAC...TGGAATTCCTCTAACTAACAATAAAAGCTGGGCCTGTGAGTCTACCACGTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR TCA 90 bp | CAGCTTTTATTGTTAGTTAGAGGAATTCCAGGAAGGGTTCTGTGCTCTTTACCCATGTCTGGAAAGTTTTaGTGGATAATGGAAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: QLLLLVRGIPGRVLCSLPMSGKF*WIMEGL Trigger: AAGTCCTTCCATTATCCATCAAAACTTTCCAGACAT...GGGTAAAGAGCACAGAACCCTTCCTGGAATTCCTCTAACTAACAATAAAAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR CCA 90 bp | CAGCTTTTATTGTTAGTTAGAGGAATTCCAGGAAGGGTTCTGTGCTCTTTACCCTTTAGAAAGTCTGGATaGATAATAGAAATCCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: QLLLLVRGIPGRVLCSLPFRKSG*IIEILA Trigger: GGCAAGGATTTCTATTATCCATCCAGACTTTCTAAA...GGGTAAAGAGCACAGAACCCTTCCTGGAATTCCTCTAACTAACAATAAAAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR CAA 90 bp | CAGGGGTCTCTGCATTTGGGAATGGAGACACGTGGTAGACTCACAGGCCCAGCTTGTGGTCAGAAAGTCTaGATGGATAATGGAAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: QGSLHLGMETRGRLTGPACGQKV*MDNGSP Trigger: AGGGCTTCCATTATCCATCAAGACTTTCTGACCACA...AGCTGGGCCTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS CCA 90 bp | CCTCCGATTGGCTGCCGGTGGTTGTGGTTGGGTGATCACAGGTTCTaGGATCCGAGTTCTAATTTCACACTTGCATGGTTTCTCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: PPIGCRWLWLGDHRF*DPSSNFTLAWFLFC Trigger: ACAGAAGAGAAACCATGCAAGTGTGAAATTAGAACTCGGATCCCAGAACCTGTGATCACCCAACCACAACCACCGGCAGCCAATCGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR CAA 90 bp | ATGCAGGGGTCTCTGCATTTGGGAATGGAGACACGTGGTAGACTCACAGGCCCACCTGTATGCTTTCTTTaGTGTGCAGAAAGTAACGAT | + |
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Preference number: 5 (lower is better) Translates to: MQGSLHLGMETRGRLTGPPVCFL*CAESND Trigger: ATCGTTACTTTCTGCACACAAAAGAAAGCATACAGG...TGGGCCTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR CAA 90 bp | GCATGCAGGGGTCTCTGCATTTGGGAATGGAGACACGTGGTAGACTCACAGGCCGTTCTAATTTCACACTaGCATGGTTTCTCTTCTGTA | + |
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Preference number: 5 (lower is better) Translates to: ACRGLCIWEWRHVVDSQAVLISH*HGFSSV Trigger: TACAGAAGAGAAACCATGCAAGTGTGAAATTAGAAC...GGCCTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTGCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR CAA 90 bp | ATGCAGGGGTCTCTGCATTTGGGAATGGAGACACGTGGTAGACTCACAGGCCCAGGATCATGGAAGGTTTaGTCACATAATTCACATTTG | + |
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Preference number: 5 (lower is better) Translates to: MQGSLHLGMETRGRLTGPGSWKV*SHNSHL Trigger: CAAATGTGAATTATGTGACAAAACCTTCCATGATCC...TGGGCCTGTGAGTCTACCACGTGTCTCCATTCCCAAATGCAGAGACCCCTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR CAA 90 bp | AGGAATTCCAGGAAGGGTTCTGTGCTCTTTACCCTTGATTGGTTAGCTCTACCTCCATGTGCTTCCCACTaGTACAGTTTTCCTCTAATA | + |
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Preference number: 5 (lower is better) Translates to: RNSRKGSVLFTLDWLALPPCASH*YSFPLI Trigger: TATTAGAGGAAAACTGTACAAGTGGGAAGCACATGG...AGGTAGAGCTAACCAATCAAGGGTAAAGAGCACAGAACCCTTCCTGGAATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225338.2 |
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| CDS-3UTR CAA 90 bp | TGGAGACACGTGGTAGACTCACAGGCCCAGCTTTTATTGTTAGTTAGAGGAATTAGTTTTGATGGGATATaGAAGGCCTTGCCACATACT | + |
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Preference number: 5 (lower is better) Translates to: WRHVVDSQAQLLLLVRGISFDGI*KALPHT Trigger: AGTATGTGGCAAGGCCTTCAATATCCCATCAAAACT...AATTCCTCTAACTAACAATAAAAGCTGGGCCTGTGAGTCTACCACGTGTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR CAA 90 bp | TGGAGACACGTGGTAGACTCACAGGCCCAGCTTTTATTGTTAGTTAGAGGAATTTATGTTTGGAAAGTCTaGATGGGTAATGGAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: WRHVVDSQAQLLLLVRGIYVWKV*MGNGRP Trigger: AGGCCTTCCATTACCCATCAAGACTTTCCAAACATA...AATTCCTCTAACTAACAATAAAAGCTGGGCCTGTGAGTCTACCACGTGTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR CAA 90 bp | TCACAGGCCCAGCTTTTATTGTTAGTTAGAGGAATTCCAGGAAGGGTTCTGTGCCCACATATATCACACTaGCAGAGATTCTCTTTTGTA | + |
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Preference number: 5 (lower is better) Translates to: SQAQLLLLVRGIPGRVLCPHISH*QRFSFV Trigger: TACAAAAGAGAATCTCTGCAAGTGTGATATATGTGG...GCACAGAACCCTTCCTGGAATTCCTCTAACTAACAATAAAAGCTGGGCCTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR CAA 90 bp | TGGAGACACGTGGTAGACTCACAGGCCCAGCTTTTATTGTTAGTTAGAGGAATTTGTGTTGAGAAAGTTTaGATGGATCATGGAAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: WRHVVDSQAQLLLLVRGICVEKV*MDHGRF Trigger: AAACCTTCCATGATCCATCAAAACTTTCTCAACACA...AATTCCTCTAACTAACAATAAAAGCTGGGCCTGTGAGTCTACCACGTGTCTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS-3UTR CAA 90 bp | AGACACGTGGTAGACTCACAGGCCCAGCTTTTATTGTTAGTTAGAGGAATTCCATATGTCTGGAAAGTTTaGATGGATAATGGAAGGACT | + |
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Preference number: 5 (lower is better) Translates to: RHVVDSQAQLLLLVRGIPYVWKV*MDNGRT Trigger: AGTCCTTCCATTATCCATCAAAACTTTCCAGACATA...TGGAATTCCTCTAACTAACAATAAAAGCTGGGCCTGTGAGTCTACCACGTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS CCA 72 bp | GGCCAGATGACAAGGTGTCCTCCGATTGGCTGCCGGTaGTTGTGGTTGGGTGATCACAGGTTCTGGGATCCG | + |
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Preference number: 6 (lower is better) Translates to: GQMTRCPPIGCR*LWLGDHRFWDP Trigger: CGGATCCCAGAACCTGTGATCACCCAACCACAACCACCGGCAGCCAATCGGAGGACACCTTGTCATCTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS CAA 72 bp | CAGATGACAAGGTGTCCTCCGATTGGCTGCCGGTGGTaGTGGTTGGGTGATCACAGGTTCTGGGATCCGAGT | + |
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Preference number: 6 (lower is better) Translates to: QMTRCPPIGCRW*WLGDHRFWDPS Trigger: ACTCGGATCCCAGAACCTGTGATCACCCAACCACAACCACCGGCAGCCAATCGGAGGACACCTTGTCATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS CCA 72 bp | ATGACAAGGTGTCCTCCGATTGGCTGCCGGTGGTTGTaGTTGGGTGATCACAGGTTCTGGGATCCGAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: MTRCPPIGCRWL*LGDHRFWDPSS Trigger: AGAACTCGGATCCCAGAACCTGTGATCACCCAACCACAACCACCGGCAGCCAATCGGAGGACACCTTGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224325.2 |
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| CDS TCA 72 bp | CTTTGCATGTATAGCATTTTCCCCCTGGGTGCACAGTaGTGGCCGCTTGTCTCTTCACATCTGAAGGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LCMYSIFPLGAQ*WPLVSSHLKAL Trigger: AAGAGCCTTCAGATGTGAAGAGACAAGCGGCCATCACTGTGCACCCAGGGGGAAAATGCTATACATGCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049705.8 |
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| CDS TCA 72 bp | CTCTCCTGTATGAGTTTTACTATTTTTGGAAAGTCTTaGTGGAGAACCGAAGGCCTTGCCACATATGTCACA | + |
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Preference number: 6 (lower is better) Translates to: LSCMSFTIFGKS*WRTEGLATYVT Trigger: TGTGACATATGTGGCAAGGCCTTCGGTTCTCCATCAAGACTTTCCAAAAATAGTAAAACTCATACAGGAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049705.8 ENSMUST00000224325.2 |
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